View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9873_high_41 (Length: 321)

Name: NF9873_high_41
Description: NF9873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9873_high_41
NF9873_high_41
[»] chr8 (9 HSPs)
chr8 (1-309)||(9070120-9070428)
chr8 (256-317)||(4011207-4011268)
chr8 (256-308)||(10080004-10080056)
chr8 (256-308)||(35643703-35643755)
chr8 (256-302)||(39967596-39967642)
chr8 (256-301)||(79167-79212)
chr8 (256-308)||(16351511-16351563)
chr8 (256-308)||(23023358-23023410)
chr8 (256-308)||(30783139-30783191)
[»] chr6 (7 HSPs)
chr6 (4-69)||(24571065-24571130)
chr6 (254-312)||(8364685-8364743)
chr6 (263-312)||(9568821-9568870)
chr6 (256-301)||(35199719-35199764)
chr6 (256-308)||(34602-34654)
chr6 (256-308)||(6293489-6293541)
chr6 (258-302)||(31831958-31832002)
[»] chr4 (14 HSPs)
chr4 (256-308)||(31403131-31403183)
chr4 (256-308)||(20999133-20999185)
chr4 (256-308)||(26356752-26356804)
chr4 (254-302)||(37488230-37488278)
chr4 (256-308)||(47147506-47147558)
chr4 (256-307)||(49738647-49738698)
chr4 (256-302)||(10209175-10209221)
chr4 (260-302)||(31961367-31961409)
chr4 (254-308)||(45204934-45204988)
chr4 (258-307)||(28351693-28351742)
chr4 (256-301)||(30853483-30853528)
chr4 (260-301)||(40018290-40018331)
chr4 (260-308)||(44860966-44861014)
chr4 (256-308)||(51421863-51421915)
[»] chr1 (11 HSPs)
chr1 (256-308)||(29577239-29577291)
chr1 (256-313)||(30834074-30834131)
chr1 (256-308)||(8203231-8203283)
chr1 (256-308)||(8628163-8628215)
chr1 (256-308)||(19969309-19969361)
chr1 (256-308)||(28528488-28528540)
chr1 (256-308)||(40416504-40416556)
chr1 (256-317)||(3818953-3819014)
chr1 (256-317)||(8342978-8343039)
chr1 (256-308)||(32404623-32404675)
chr1 (256-308)||(38869015-38869067)
[»] chr7 (11 HSPs)
chr7 (254-301)||(28858185-28858232)
chr7 (256-307)||(30664702-30664753)
chr7 (256-308)||(28628030-28628082)
chr7 (256-308)||(45601609-45601661)
chr7 (256-302)||(1569155-1569201)
chr7 (257-302)||(28562464-28562509)
chr7 (256-317)||(29653643-29653704)
chr7 (259-308)||(30814771-30814820)
chr7 (256-308)||(12966149-12966201)
chr7 (256-308)||(37976368-37976420)
chr7 (256-312)||(38135310-38135366)
[»] chr5 (8 HSPs)
chr5 (257-308)||(29922417-29922468)
chr5 (256-308)||(12576957-12577009)
chr5 (254-308)||(28015-28069)
chr5 (256-302)||(6889132-6889178)
chr5 (260-308)||(2713077-2713125)
chr5 (256-308)||(7678611-7678663)
chr5 (256-308)||(27998574-27998626)
chr5 (256-308)||(38684613-38684665)
[»] chr3 (9 HSPs)
chr3 (256-302)||(36820074-36820120)
chr3 (256-307)||(2340814-2340865)
chr3 (256-302)||(46431776-46431822)
chr3 (256-301)||(41452837-41452882)
chr3 (256-317)||(45289188-45289249)
chr3 (260-308)||(11581577-11581625)
chr3 (256-308)||(39600778-39600830)
chr3 (256-308)||(40116565-40116617)
chr3 (256-308)||(40982029-40982081)
[»] chr2 (8 HSPs)
chr2 (256-317)||(19235081-19235142)
chr2 (256-308)||(33287554-33287606)
chr2 (256-307)||(26784437-26784488)
chr2 (259-302)||(33504362-33504405)
chr2 (256-302)||(35755346-35755392)
chr2 (256-302)||(38435091-38435137)
chr2 (256-308)||(9556466-9556518)
chr2 (256-308)||(26670901-26670953)
[»] scaffold0325 (1 HSPs)
scaffold0325 (256-308)||(11930-11982)
[»] scaffold0015 (1 HSPs)
scaffold0015 (256-308)||(66670-66722)
[»] scaffold0018 (1 HSPs)
scaffold0018 (256-307)||(178517-178568)
[»] scaffold0003 (1 HSPs)
scaffold0003 (256-307)||(346870-346921)


Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 9070428 - 9070120
Alignment:
Q  1 gtaatggatcgcttgaacatgggttctagctttagagtaacctacatattcaagtgattagaaatcatcataattaagactttttacatgataacgaaca 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  9070428 gtaatggatcgcttgaatatgggttctagctttagagtaacctacatattcaagtgattataaatcatcataattaagcctttttacatgataacgaaca 9070329  T
Q  101 tgaaagaaaataatttttagttagtcacgtattaaaataaattatacaagagtttatacaacttcaactaaattttaccccaccaaataaacttaggtat 200  Q
    ||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9070328 tgaaagaaaataaattttagtttgtcatgtattaaaataaagtatacaagagtttatacaacttcaactaaattttaccccaccaaataaacttaggtat 9070229  T
Q  201 atggatcaaacaacttcatattgttactcttctatcataatgttctacttctattattaatctctagatctttcataatagtttttgttatagtttttct 300  Q
    |||||||||||||| ||||| ||||||||| |||||||||| |||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  9070228 atggatcaaacaacgtcataatgttactctgctatcataatattctacttctatcattaatctctagatctatcataatagtttttcttatagtttttct 9070129  T
Q  301 agatcttca 309  Q
    || ||||||    
T  9070128 aggtcttca 9070120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 4011268 - 4011207
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttcatctctctc 317  Q
    |||||||| |||||||||| ||||||||| | ||||||||||||||| ||||| ||| ||||    
T  4011268 attaatctttagatctttcttaatagtttctcttatagtttttctaggtcttcctctgtctc 4011207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 10080004 - 10080056
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||| ||| ||||||| ||||||||| ||||| |||||    
T  10080004 attaatctctagatctttcttaacagtttttcttatagtttctctaggtcttc 10080056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 35643703 - 35643755
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||| ||||| ||| | ||||||||||||||| |||||    
T  35643703 attaatctctagatctttcttaataatttctcttatagtttttctaggtcttc 35643755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 39967596 - 39967642
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    ||||||| ||||||||||| ||||||||| | |||||||||||||||    
T  39967596 attaatcgctagatctttcttaatagtttctcttatagtttttctag 39967642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 79212 - 79167
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttcta 301  Q
    ||||||||||||||||||| ||||||||| | ||||||| ||||||    
T  79212 attaatctctagatctttcttaatagtttctcttatagtgtttcta 79167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 16351563 - 16351511
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||| ||| ||||||||| | | ||||||||||||| |||||    
T  16351563 attaatctctagatccttcttaatagtttctctaatagtttttctaggtcttc 16351511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 23023410 - 23023358
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||||| |||||||||| || |||||| | ||||||||||||||| |||||    
T  23023410 attaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttc 23023358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 30783139 - 30783191
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||||||||||||||||  |||||||| | |||| ||||| ||||||||||    
T  30783139 attaatctctagatctttctaaatagtttctcttatggttttactagatcttc 30783191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 24571065 - 24571130
Alignment:
Q  4 atggatcgcttgaacatgggttctagctttagagtaacctacatattcaagtgattagaaatcatc 69  Q
    ||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||  |||||||    
T  24571065 atggatcgcttgaacatcggttctagttttagagtaacctacaaattcaagtgattaccaatcatc 24571130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 8364743 - 8364685
Alignment:
Q  254 ttattaatctctagatctttcataatagtttttgttatagtttttctagatcttcatct 312  Q
    |||||||| |||| ||||||| ||||||||| | ||||||||||| ||| |||||||||    
T  8364743 ttattaatttctaaatctttcttaatagtttctcttatagtttttttaggtcttcatct 8364685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 9568870 - 9568821
Alignment:
Q  263 tctagatctttcataatagtttttgttatagtttttctagatcttcatct 312  Q
    |||| ||||||| ||||||||| | |||||||| ||||||||||||||||    
T  9568870 tctaaatctttcctaatagtttctcttatagttgttctagatcttcatct 9568821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 35199719 - 35199764
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttcta 301  Q
    ||||||||||||||||||| ||||||||| | ||||| ||||||||    
T  35199719 attaatctctagatctttcctaatagtttcttttataatttttcta 35199764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 34602 - 34654
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||||| |||||||||| |||| |||| | ||||||||||||||| |||||    
T  34602 attaatctttagatctttcttaatggtttctcttatagtttttctaggtcttc 34654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 6293489 - 6293541
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||| ||||||| |||| ||||||||| | || ||||||||||||||||||    
T  6293489 attaatatctagatatttcctaatagtttctattttagtttttctagatcttc 6293541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 31831958 - 31832002
Alignment:
Q  258 taatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    ||||||||||||||||| ||||||||| | | |||||||||||||    
T  31831958 taatctctagatctttcttaatagtttctctgatagtttttctag 31832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 31403131 - 31403183
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  31403131 attaatctctagatctttcataatagtttttcttatagtttctctagatcttc 31403183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 20999185 - 20999133
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||| ||||||||||||| ||||||||| | ||||||||||||||| |||||    
T  20999185 attaaactctagatctttcttaatagtttatattatagtttttctaggtcttc 20999133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 26356804 - 26356752
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||| ||||||| ||||| | ||||||||||||||| |||||    
T  26356804 attaatctctagatccttcataacagtttctcttatagtttttctaggtcttc 26356752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 37488278 - 37488230
Alignment:
Q  254 ttattaatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    |||||||| |||||||||||| ||||||||| | |||||||||||||||    
T  37488278 ttattaatttctagatctttcttaatagtttctcttatagtttttctag 37488230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 47147558 - 47147506
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||| ||||||||| |  |||||||||||||| |||||    
T  47147558 attaatctctagatctttcttaatagtttcttctatagtttttctaggtcttc 47147506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 49738647 - 49738698
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatctt 307  Q
    |||||| |||||||| ||| ||||||||||| ||||||||||||||| ||||    
T  49738647 attaatttctagatccttcttaatagtttttattatagtttttctaggtctt 49738698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 10209221 - 10209175
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    ||||||||||||||| ||| ||||||||| | |||||||||||||||    
T  10209221 attaatctctagatccttcttaatagtttctcttatagtttttctag 10209175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 31961367 - 31961409
Alignment:
Q  260 atctctagatctttcataatagtttttgttatagtttttctag 302  Q
    ||||||||||||||| ||||||||| | |||||||||||||||    
T  31961367 atctctagatctttcctaatagtttctcttatagtttttctag 31961409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 45204934 - 45204988
Alignment:
Q  254 ttattaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||| ||||| ||||||| ||||||||| | ||||||||||||||| |||||    
T  45204934 ttattaaactctaaatctttcctaatagtttctcttatagtttttctaggtcttc 45204988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 28351742 - 28351693
Alignment:
Q  258 taatctctagatctttcataatagtttttgttatagtttttctagatctt 307  Q
    ||||||||| ||||||| ||||||||| | ||||||||||||||| ||||    
T  28351742 taatctctaaatctttcgtaatagtttctcttatagtttttctaggtctt 28351693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 30853528 - 30853483
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttcta 301  Q
    |||||||| ||||| |||||||||||||| | ||||||||||||||    
T  30853528 attaatctttagatttttcataatagtttctcttatagtttttcta 30853483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 40018290 - 40018331
Alignment:
Q  260 atctctagatctttcataatagtttttgttatagtttttcta 301  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||    
T  40018290 atctctagatctttcttaacagtttttcttatagtttttcta 40018331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 44861014 - 44860966
Alignment:
Q  260 atctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||||||||||||||||||||||   |||||||||||| || |||||    
T  44861014 atctctagatctttcataatagtttcccttatagtttttcaaggtcttc 44860966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 51421915 - 51421863
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||| ||||| ||||||| ||||||||| | |||||||||||||| ||||||    
T  51421915 attaacctctaaatctttcctaatagtttctcttatagtttttctaaatcttc 51421863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000007; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 29577239 - 29577291
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||| |||||    
T  29577239 attaatctctagatctttcttaatagtttatgttgtagtttttctaggtcttc 29577291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 30834074 - 30834131
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttcatctc 313  Q
    ||||||||||||||||||| ||||||||| | |||||| |||||||| ||||| ||||    
T  30834074 attaatctctagatctttcgtaatagtttctcttatagcttttctaggtcttcctctc 30834131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 8203231 - 8203283
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||  ||||||||| | ||||||||||||||| |||||    
T  8203231 attaatctctagatcttttttaatagtttctcttatagtttttctaggtcttc 8203283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 8628215 - 8628163
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||| ||||| ||||||| ||||||||| ||||||||||||||||| |||||    
T  8628215 attaacctctaaatctttcctaatagtttctgttatagtttttctaggtcttc 8628163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 19969309 - 19969361
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||  ||||||||| | ||||||||||||||| |||||    
T  19969309 attaatctctagatctttgttaatagtttctcttatagtttttctaggtcttc 19969361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 28528540 - 28528488
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||| ||| |||||    
T  28528540 attaatctctagatccttcttaatagtttctgttatagtttttttaggtcttc 28528488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 40416556 - 40416504
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||||| |||||||||| ||||||||| | ||||||||||||||| |||||    
T  40416556 attaatctatagatctttcttaatagtttgtcttatagtttttctaggtcttc 40416504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 3818953 - 3819014
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttcatctctctc 317  Q
    ||||||||||| ||||||| ||||||||| | |||||||||||| || ||||| ||| ||||    
T  3818953 attaatctctaaatctttcttaatagtttctcttatagtttttcaaggtcttcctctttctc 3819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 8342978 - 8343039
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttcatctctctc 317  Q
    ||||||||||||||||||  |||| |||| | ||||||||||||||| ||||| ||| ||||    
T  8342978 attaatctctagatctttattaattgtttctcttatagtttttctaggtcttcctctatctc 8343039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 32404623 - 32404675
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||| ||| |||||    
T  32404623 attaatctctaaatctttcctaatagtttctcttatagtttttgtaggtcttc 32404675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 38869067 - 38869015
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||| ||||||||||| ||||| ||| | ||||||||||||||| |||||    
T  38869067 attaatcgctagatctttcttaataatttctcttatagtttttctaggtcttc 38869015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 301
Target Start/End: Complemental strand, 28858232 - 28858185
Alignment:
Q  254 ttattaatctctagatctttcataatagtttttgttatagtttttcta 301  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  28858232 ttattaatctctagatctttcttaatagtttgtcttatagtttttcta 28858185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 30664753 - 30664702
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatctt 307  Q
    ||||||||||||||||||| ||||||||| | ||||||| ||||||||||||    
T  30664753 attaatctctagatctttcttaatagtttcttttatagtctttctagatctt 30664702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 28628030 - 28628082
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||| |||||    
T  28628030 attaatctctaaatctttcctaatagtttctcttatagtttttctaggtcttc 28628082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 45601661 - 45601609
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||| |||||    
T  45601661 attaatctctagatctttcttaatggtttctcttatagtttttctaggtcttc 45601609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 1569201 - 1569155
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    ||||||||||||||||||| ||||||||  | |||||||||||||||    
T  1569201 attaatctctagatctttcttaatagttactcttatagtttttctag 1569155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 28562464 - 28562509
Alignment:
Q  257 ttaatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    |||||||||| ||||||||||||||||| | ||||| |||||||||    
T  28562464 ttaatctctaaatctttcataatagtttctcttatattttttctag 28562509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 29653643 - 29653704
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttcatctctctc 317  Q
    ||||||||||||||||||| ||||||||| | ||| ||||||||| | ||||| ||| ||||    
T  29653643 attaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctc 29653704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 30814771 - 30814820
Alignment:
Q  259 aatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||||||||||||| ||||||||| | ||||||| ||||||| |||||    
T  30814771 aatctctagatctttcttaatagtttctcttatagtgtttctaggtcttc 30814820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 12966201 - 12966149
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||| || |||| ||||||||| | ||||||||||||||| |||||    
T  12966201 attaatctctaaatatttcttaatagtttctcttatagtttttctaggtcttc 12966149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 37976420 - 37976368
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||| |||||||||| ||||||   ||||||||||||||| |||||    
T  37976420 attaatctctaaatctttcatattagtttcacttatagtttttctaggtcttc 37976368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 38135310 - 38135366
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttcatct 312  Q
    ||||||||||| ||||||  ||||||||| | ||||| ||||||||| |||||||||    
T  38135310 attaatctctaaatcttttttaatagtttctcttatactttttctaggtcttcatct 38135366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 29922468 - 29922417
Alignment:
Q  257 ttaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||||||| ||||||| ||||||||| | |||||||||||||||||||||    
T  29922468 ttaatctctaaatctttcttaatagtttctcttatagtttttctagatcttc 29922417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 12576957 - 12577009
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||| ||||||||| | || |||||||||||| |||||    
T  12576957 attaatctctagatctttcttaatagtttatcttgtagtttttctaggtcttc 12577009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 28069 - 28015
Alignment:
Q  254 ttattaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||| ||||| ||||||| ||||||||| | ||||||||||||||| |||||    
T  28069 ttattaacctctaaatctttcctaatagtttctcttatagtttttctaggtcttc 28015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 6889178 - 6889132
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    ||||||||||| ||||||| ||||||||| | |||||||||||||||    
T  6889178 attaatctctaaatctttcctaatagtttctcttatagtttttctag 6889132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 2713125 - 2713077
Alignment:
Q  260 atctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||| ||| ||||||||| | ||||||||||||||| |||||    
T  2713125 atctctagatccttcttaatagtttctcttatagtttttctaggtcttc 2713077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 7678663 - 7678611
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||||||||||||||||  |||||||| | |||| ||||| ||||||||||    
T  7678663 attaatctctagatctttctaaatagtttctcttatggttttactagatcttc 7678611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 27998626 - 27998574
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||||| |||||||||| || |||||| | ||||||||||||||| |||||    
T  27998626 attaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttc 27998574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 38684665 - 38684613
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||| ||| ||||| | || |||||||||||| |||||    
T  38684665 attaatctctagatctttcttaaaagtttctcttgtagtttttctaggtcttc 38684613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 36820074 - 36820120
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    ||||||||||||||||||| ||||||||| | |||||||||||||||    
T  36820074 attaatctctagatctttcttaatagtttctcttatagtttttctag 36820120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 2340814 - 2340865
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatctt 307  Q
    ||||||||||||||||||| ||||||||| | |||||||||| |||| ||||    
T  2340814 attaatctctagatctttcttaatagtttctcttatagttttcctaggtctt 2340865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 46431776 - 46431822
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    ||||||||||||||||||  ||||||||| | |||||||||||||||    
T  46431776 attaatctctagatcttttttaatagtttctcttatagtttttctag 46431822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 41452837 - 41452882
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttcta 301  Q
    ||||||||||||||||||| |||||||||   ||||||||||||||    
T  41452837 attaatctctagatctttcttaatagtttaacttatagtttttcta 41452882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 45289188 - 45289249
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttcatctctctc 317  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||  ||||||||| ||| ||||    
T  45289188 attaatctctaaatctttcctaatagtttctcttatagttttcatagatcttcctctatctc 45289249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 11581625 - 11581577
Alignment:
Q  260 atctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||| |||||||||| ||||||||| | ||||||||||||||| |||||    
T  11581625 atctatagatctttcttaatagtttctcttatagtttttctaggtcttc 11581577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 39600778 - 39600830
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||| ||||| ||||||| ||||||||| | ||||||||||||||| |||||    
T  39600778 attaacctctaaatctttcttaatagtttctcttatagtttttctaggtcttc 39600830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 40116565 - 40116617
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||| |||| || ||||||||| | ||||||||||||||| |||||    
T  40116565 attaatctctaaatctatcctaatagtttctcttatagtttttctaggtcttc 40116617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 40982081 - 40982029
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||| |||||||||||| ||||||||  | ||||||||||||||| |||||    
T  40982081 attaatatctagatctttcttaatagttactcttatagtttttctaggtcttc 40982029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 19235081 - 19235142
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttcatctctctc 317  Q
    |||||||||||||||||||  |||||||| | ||||||||||||||| ||||| ||| ||||    
T  19235081 attaatctctagatctttctcaatagtttctcttatagtttttctaggtcttcctctatctc 19235142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 33287606 - 33287554
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    |||||| |||||||||||| ||||||||| | ||||||||||||||| |||||    
T  33287606 attaatttctagatctttcttaatagtttctcttatagtttttctaggtcttc 33287554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 26784437 - 26784488
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatctt 307  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||| ||||    
T  26784437 attaatctctatatctttcttaatagtttctcttatagtttttctaggtctt 26784488  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 33504405 - 33504362
Alignment:
Q  259 aatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    |||||||||||||||| ||||||||| | |||||||||||||||    
T  33504405 aatctctagatctttcttaatagtttctcttatagtttttctag 33504362  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 35755346 - 35755392
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||||||||    
T  35755346 attaacctctaaatctttcctaatagtttctgttatagtttttctag 35755392  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 38435137 - 38435091
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctag 302  Q
    ||||||||||||||||||| ||||||||| | || ||||||||||||    
T  38435137 attaatctctagatctttcttaatagtttctcttgtagtttttctag 38435091  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 9556466 - 9556518
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||| ||||||||||| ||||||||| | |||||||||||| || |||||    
T  9556466 attaatcactagatctttcttaatagtttatcttatagtttttcaaggtcttc 9556518  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 26670953 - 26670901
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||| ||| |||||    
T  26670953 attaatctctaaatctttcttaatagtttcttttatagtttttgtaggtcttc 26670901  T

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Target: scaffold0325 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 11982 - 11930
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||| ||| ||||||||| | ||||||||||||||| |||||    
T  11982 attaatctctagatccttcttaatagtttctcttatagtttttctagttcttc 11930  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 66722 - 66670
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatcttc 308  Q
    ||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||||    
T  66722 attaatctctagatctttcttaataattttttttataatttttctaggtcttc 66670  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 178517 - 178568
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatctt 307  Q
    ||||||||||| ||||||| ||||||||| | ||||||||||||||| ||||    
T  178517 attaatctctatatctttcttaatagtttctcttatagtttttctaggtctt 178568  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 346870 - 346921
Alignment:
Q  256 attaatctctagatctttcataatagtttttgttatagtttttctagatctt 307  Q
    ||||||||||||||||||  ||||||||| | || |||||||||||||||||    
T  346870 attaatctctagatcttttttaatagtttatcttgtagtttttctagatctt 346921  T

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