View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9873_low_102 (Length: 228)

Name: NF9873_low_102
Description: NF9873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9873_low_102
NF9873_low_102
[»] chr6 (17 HSPs)
chr6 (16-221)||(19983144-19983349)
chr6 (16-221)||(35015009-35015214)
chr6 (16-221)||(18583515-18583720)
chr6 (16-173)||(26089933-26090091)
chr6 (17-173)||(15742120-15742275)
chr6 (16-173)||(18002395-18002553)
chr6 (16-173)||(23995121-23995279)
chr6 (16-172)||(4991271-4991427)
chr6 (17-177)||(15889601-15889762)
chr6 (17-177)||(22585441-22585602)
chr6 (17-177)||(22590272-22590433)
chr6 (17-173)||(25640456-25640611)
chr6 (16-149)||(15004831-15004963)
chr6 (141-174)||(1650020-1650053)
chr6 (157-214)||(21623506-21623563)
chr6 (141-173)||(16232199-16232231)
chr6 (141-173)||(19610325-19610357)
[»] chr2 (26 HSPs)
chr2 (16-221)||(22274920-22275125)
chr2 (16-221)||(22284153-22284358)
chr2 (16-173)||(9652796-9652953)
chr2 (22-221)||(15633418-15633617)
chr2 (22-172)||(25213252-25213403)
chr2 (16-173)||(21273949-21274106)
chr2 (141-221)||(20627190-20627270)
chr2 (141-221)||(19794581-19794661)
chr2 (141-221)||(43642833-43642913)
chr2 (17-173)||(7321716-7321872)
chr2 (136-177)||(19666843-19666884)
chr2 (141-174)||(19689314-19689347)
chr2 (157-214)||(43646232-43646289)
chr2 (141-173)||(463043-463075)
chr2 (141-173)||(3798520-3798552)
chr2 (141-173)||(8944153-8944185)
chr2 (141-173)||(12635785-12635817)
chr2 (141-173)||(12641559-12641591)
chr2 (141-173)||(12728699-12728731)
chr2 (141-173)||(14906354-14906386)
chr2 (141-173)||(16935900-16935932)
chr2 (141-173)||(17006560-17006592)
chr2 (141-173)||(22863235-22863267)
chr2 (141-173)||(23820388-23820420)
chr2 (141-173)||(36982364-36982396)
chr2 (141-173)||(42177886-42177918)
[»] scaffold0034 (1 HSPs)
scaffold0034 (16-221)||(80062-80267)
[»] chr7 (28 HSPs)
chr7 (16-221)||(1936869-1937074)
chr7 (16-221)||(32493898-32494103)
chr7 (16-221)||(126613-126818)
chr7 (16-221)||(111121-111326)
chr7 (16-173)||(3049780-3049937)
chr7 (16-173)||(2029119-2029276)
chr7 (16-173)||(42056188-42056346)
chr7 (16-173)||(2190085-2190243)
chr7 (34-169)||(15516765-15516901)
chr7 (141-214)||(3060271-3060344)
chr7 (142-221)||(7283908-7283987)
chr7 (17-171)||(13352151-13352306)
chr7 (17-125)||(39291457-39291565)
chr7 (139-214)||(13377849-13377924)
chr7 (157-214)||(13389693-13389750)
chr7 (157-206)||(17223797-17223846)
chr7 (136-173)||(25124445-25124482)
chr7 (141-173)||(7293333-7293365)
chr7 (141-173)||(11516544-11516576)
chr7 (141-173)||(13758677-13758709)
chr7 (141-173)||(14113903-14113935)
chr7 (141-173)||(15441478-15441510)
chr7 (141-173)||(15862226-15862258)
chr7 (141-173)||(15927875-15927907)
chr7 (141-173)||(16212071-16212103)
chr7 (141-173)||(18979938-18979970)
chr7 (141-173)||(30262043-30262075)
chr7 (141-173)||(36052971-36053003)
[»] chr1 (10 HSPs)
chr1 (16-221)||(21860209-21860414)
chr1 (16-215)||(44034829-44035028)
chr1 (16-172)||(15861327-15861483)
chr1 (80-221)||(41218667-41218808)
chr1 (16-96)||(22367216-22367296)
chr1 (141-224)||(41394527-41394610)
chr1 (143-214)||(27675120-27675191)
chr1 (141-174)||(45051726-45051759)
chr1 (141-173)||(37844374-37844406)
chr1 (141-173)||(46523695-46523727)
[»] chr3 (36 HSPs)
chr3 (16-221)||(55513068-55513273)
chr3 (16-221)||(3992748-3992953)
chr3 (16-221)||(7854180-7854385)
chr3 (16-221)||(17955832-17956041)
chr3 (17-221)||(45581830-45582034)
chr3 (16-221)||(54037976-54038181)
chr3 (16-221)||(2844389-2844594)
chr3 (16-173)||(30153140-30153297)
chr3 (17-173)||(28558370-28558526)
chr3 (16-173)||(23492571-23492728)
chr3 (16-173)||(33342079-33342236)
chr3 (16-172)||(54685202-54685358)
chr3 (16-173)||(53771239-53771397)
chr3 (16-173)||(38168112-38168269)
chr3 (16-173)||(16261651-16261809)
chr3 (16-173)||(18970119-18970277)
chr3 (141-221)||(19232089-19232169)
chr3 (141-216)||(15857120-15857195)
chr3 (141-224)||(16743990-16744073)
chr3 (17-206)||(15550797-15550986)
chr3 (17-96)||(48421776-48421855)
chr3 (139-214)||(38810868-38810943)
chr3 (136-214)||(13301323-13301401)
chr3 (136-214)||(13311979-13312057)
chr3 (141-174)||(15615137-15615170)
chr3 (157-214)||(17205019-17205076)
chr3 (136-173)||(51961031-51961068)
chr3 (141-173)||(2050115-2050147)
chr3 (141-173)||(2449152-2449184)
chr3 (141-173)||(8268650-8268682)
chr3 (141-173)||(8275750-8275782)
chr3 (141-173)||(14842487-14842519)
chr3 (141-173)||(16933869-16933901)
chr3 (141-173)||(17912398-17912430)
chr3 (141-173)||(18911300-18911332)
chr3 (141-173)||(19260749-19260781)
[»] scaffold0686 (2 HSPs)
scaffold0686 (16-215)||(5941-6140)
scaffold0686 (27-215)||(5735-5923)
[»] scaffold0016 (3 HSPs)
scaffold0016 (18-221)||(166116-166319)
scaffold0016 (18-215)||(162036-162233)
scaffold0016 (139-214)||(116410-116485)
[»] scaffold0184 (1 HSPs)
scaffold0184 (16-221)||(31132-31337)
[»] scaffold0078 (2 HSPs)
scaffold0078 (16-221)||(41507-41712)
scaffold0078 (141-173)||(36980-37012)
[»] chr8 (22 HSPs)
chr8 (16-221)||(24716714-24716919)
chr8 (17-221)||(274642-274846)
chr8 (17-221)||(641003-641207)
chr8 (17-221)||(826809-827013)
chr8 (16-221)||(39115473-39115678)
chr8 (16-173)||(41506709-41506866)
chr8 (16-173)||(24385652-24385809)
chr8 (141-221)||(16404852-16404932)
chr8 (17-173)||(21259391-21259547)
chr8 (17-177)||(17502360-17502521)
chr8 (17-149)||(23218076-23218208)
chr8 (16-82)||(22321437-22321503)
chr8 (17-125)||(4234054-4234162)
chr8 (139-173)||(31194217-31194251)
chr8 (141-173)||(5238404-5238436)
chr8 (141-173)||(13662182-13662214)
chr8 (141-173)||(13720845-13720877)
chr8 (141-173)||(16872968-16873000)
chr8 (141-173)||(22907128-22907160)
chr8 (141-173)||(24661162-24661194)
chr8 (141-173)||(43373392-43373424)
chr8 (141-173)||(43685863-43685895)
[»] chr4 (20 HSPs)
chr4 (16-221)||(25119059-25119264)
chr4 (16-221)||(5682380-5682584)
chr4 (16-173)||(14951960-14952117)
chr4 (16-173)||(15272211-15272369)
chr4 (71-173)||(15135907-15136010)
chr4 (141-221)||(54118120-54118200)
chr4 (16-177)||(19559557-19559719)
chr4 (16-125)||(49071885-49071994)
chr4 (22-96)||(34177617-34177691)
chr4 (139-214)||(41165808-41165883)
chr4 (141-174)||(14996445-14996478)
chr4 (141-173)||(7131982-7132014)
chr4 (141-173)||(13246737-13246769)
chr4 (141-173)||(15287162-15287194)
chr4 (141-173)||(15294271-15294303)
chr4 (141-173)||(16327840-16327872)
chr4 (141-173)||(16609013-16609045)
chr4 (141-173)||(17145574-17145606)
chr4 (141-173)||(20001030-20001062)
chr4 (141-173)||(26680517-26680549)
[»] scaffold0132 (1 HSPs)
scaffold0132 (32-221)||(42568-42754)
[»] scaffold0342 (1 HSPs)
scaffold0342 (16-221)||(304-508)
[»] scaffold0116 (1 HSPs)
scaffold0116 (16-221)||(30292-30497)
[»] chr5 (15 HSPs)
chr5 (16-172)||(11342883-11343039)
chr5 (16-173)||(2032008-2032165)
chr5 (16-173)||(21650893-21651050)
chr5 (16-160)||(21205124-21205268)
chr5 (22-173)||(16105847-16105999)
chr5 (142-216)||(11584374-11584448)
chr5 (17-95)||(22662653-22662731)
chr5 (21-169)||(25005019-25005165)
chr5 (141-173)||(7425631-7425663)
chr5 (141-173)||(20623286-20623318)
chr5 (141-173)||(21233442-21233474)
chr5 (141-173)||(23507270-23507302)
chr5 (141-173)||(25900320-25900352)
chr5 (141-173)||(35791015-35791047)
chr5 (141-173)||(37053061-37053093)
[»] scaffold0032 (3 HSPs)
scaffold0032 (16-173)||(55779-55936)
scaffold0032 (70-173)||(108075-108179)
scaffold0032 (136-214)||(104477-104555)
[»] scaffold0234 (1 HSPs)
scaffold0234 (18-173)||(17304-17459)
[»] scaffold0706 (1 HSPs)
scaffold0706 (15-173)||(6443-6601)
[»] scaffold0039 (1 HSPs)
scaffold0039 (17-173)||(12418-12574)
[»] scaffold0465 (1 HSPs)
scaffold0465 (16-173)||(9882-10040)
[»] scaffold0251 (1 HSPs)
scaffold0251 (16-173)||(13285-13443)
[»] scaffold0597 (1 HSPs)
scaffold0597 (16-173)||(878-1035)
[»] scaffold0303 (2 HSPs)
scaffold0303 (16-173)||(4346-4504)
scaffold0303 (16-96)||(5-85)
[»] scaffold0028 (1 HSPs)
scaffold0028 (22-172)||(130760-130911)
[»] scaffold0004 (1 HSPs)
scaffold0004 (16-174)||(193396-193545)
[»] scaffold0175 (2 HSPs)
scaffold0175 (16-101)||(15147-15232)
scaffold0175 (141-173)||(882-914)
[»] scaffold0063 (1 HSPs)
scaffold0063 (17-177)||(44009-44170)
[»] scaffold0507 (1 HSPs)
scaffold0507 (17-206)||(1371-1557)
[»] scaffold1164 (1 HSPs)
scaffold1164 (142-221)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (142-221)||(19802-19881)
scaffold0122 (142-221)||(24106-24185)
[»] scaffold0077 (2 HSPs)
scaffold0077 (142-221)||(15319-15398)
scaffold0077 (141-174)||(36836-36869)
[»] scaffold0049 (1 HSPs)
scaffold0049 (142-221)||(20493-20572)
[»] scaffold0876 (1 HSPs)
scaffold0876 (142-212)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (142-216)||(6261-6335)
scaffold0310 (142-179)||(4-41)
[»] scaffold1295 (1 HSPs)
scaffold1295 (17-96)||(305-384)
[»] scaffold0079 (1 HSPs)
scaffold0079 (17-177)||(3732-3897)
[»] scaffold0413 (1 HSPs)
scaffold0413 (139-173)||(5990-6024)
[»] scaffold0058 (1 HSPs)
scaffold0058 (139-173)||(57392-57426)
[»] scaffold0013 (1 HSPs)
scaffold0013 (157-214)||(35816-35873)
[»] scaffold1500 (1 HSPs)
scaffold1500 (141-173)||(1431-1463)
[»] scaffold0761 (1 HSPs)
scaffold0761 (141-173)||(1492-1524)
[»] scaffold0498 (1 HSPs)
scaffold0498 (141-173)||(9183-9215)
[»] scaffold0383 (1 HSPs)
scaffold0383 (141-173)||(2700-2732)
[»] scaffold0302 (1 HSPs)
scaffold0302 (141-173)||(12418-12450)
[»] scaffold0266 (1 HSPs)
scaffold0266 (141-173)||(1430-1462)
[»] scaffold0162 (1 HSPs)
scaffold0162 (141-173)||(26340-26372)
[»] scaffold0141 (2 HSPs)
scaffold0141 (141-173)||(22857-22889)
scaffold0141 (141-173)||(27112-27144)
[»] scaffold0124 (1 HSPs)
scaffold0124 (141-173)||(1496-1528)
[»] scaffold0025 (1 HSPs)
scaffold0025 (141-173)||(146906-146938)
[»] scaffold0023 (2 HSPs)
scaffold0023 (141-173)||(48903-48935)
scaffold0023 (141-173)||(153924-153956)
[»] scaffold0012 (1 HSPs)
scaffold0012 (141-173)||(247366-247398)
[»] scaffold0009 (1 HSPs)
scaffold0009 (141-173)||(272330-272362)
[»] scaffold0008 (1 HSPs)
scaffold0008 (141-173)||(128095-128127)
[»] scaffold0001 (2 HSPs)
scaffold0001 (141-173)||(172210-172242)
scaffold0001 (141-173)||(177913-177945)


Alignment Details
Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 19983349 - 19983144
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  19983349 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattggattcatgataatcacttattctcataatcaattatgcata 19983250  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19983249 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 19983150  T
Q  216 gcttct 221  Q
    | ||||    
T  19983149 gattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 35015214 - 35015009
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  35015214 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 35015115  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35015114 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 35015015  T
Q  216 gcttct 221  Q
    | ||||    
T  35015014 gattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 18583515 - 18583720
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||| |||||||    
T  18583515 acatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaatgatgcata 18583614  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  18583615 gaacaggagaaaaagaattaactaaatgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctat 18583714  T
Q  216 gcttct 221  Q
    | ||||    
T  18583715 gattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 26089933 - 26090091
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  26089933 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 26090032  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  26090033 gaatcaagagaaaaagaattaatcaaatgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 15742275 - 15742120
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |    
T  15742275 catcaaattaacataatcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcat-g 15742177  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  15742176 aacaagagaaaaagaattaaccaaaggattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 18002553 - 18002395
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||    
T  18002553 acatcaaatgaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatgcccataatcaattatgcata 18002454  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  18002453 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 23995121 - 23995279
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  23995121 acatcaaattaacatatccaaacatatctctacaacataagcacgaattccaaatattgggttcatgataatcacttattctcataatcaattatgcata 23995220  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  23995221 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 4991271 - 4991427
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  4991271 acatcaaat-aacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 4991369  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 172  Q
     || ||||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  4991370 aaatcaagagaaaaagaattaaacaaatgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 15889762 - 15889601
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| |||| |||| |||||||||||||||| |||||||||  |||||||  |||||  |||  || ||||||||||    
T  15889762 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaggttgggttcacaataatcacgtattcaaataaacacttatgcatag 15889663  T
Q  117 aacaagagaaaaagaattaactaaatgattatga-taaaaactaacccccttaccttaatta 177  Q
    || |||||| ||  |||||||||| ||||||||| | ||| ||||||||||||||| |||||    
T  15889662 aaaaagagagaagaaattaactaagtgattatgattgaaatctaacccccttacctcaatta 15889601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 22585602 - 22585441
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||| ||| ||||||||||| |||| |||| ||||||||||||||||||||||||||  ||||||| ||||||  |||  || ||||||||||    
T  22585602 catcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatag 22585503  T
Q  117 aacaagagaaaaagaattaactaaatgattatg-ataaaaactaacccccttaccttaatta 177  Q
    || |||||| ||  || ||||||| ||||||||  | ||| ||||||||||||||| |||||    
T  22585502 aaaaagagagaagaaactaactaagtgattatgcttgaaatctaacccccttacctcaatta 22585441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 22590433 - 22590272
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||| ||| ||||||||||| |||| |||| ||||||||||||||||||||||||||  ||||||| ||||||  |||  || ||||||||||    
T  22590433 catcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcaaaataatcacttattcaaataagcacttatgcatag 22590334  T
Q  117 aacaagagaaaaagaattaactaaatgattatg-ataaaaactaacccccttaccttaatta 177  Q
    || |||||| ||  || ||||||| ||||||||  | ||| ||||||||||||||| |||||    
T  22590333 aaaaagagagaagaaactaactaagtgattatgcttgaaatctaacccccttacctcaatta 22590272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 25640611 - 25640456
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| |||| |||| |||||||||||||||  |||||||||  ||||||| ||||||  |||  || ||||||||||    
T  25640611 catcaaattaacatactcaaacatatc-ctacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatag 25640513  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    || ||||||  |  ||||| |||| |||||||||| ||  |||||||||||||||||    
T  25640512 aaaaagagagtagaaattacctaagtgattatgatgaattctaacccccttacctta 25640456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 15004963 - 15004831
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||| |||| ||||||||||| |||| |||| ||||||||||||||||||||||||||  ||||||  ||||||  |||  || |||||||||    
T  15004963 acatcaaatta-catactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatctcttattcaaataagcacttatgcata 15004865  T
Q  116 gaacaagagaaaaagaattaactaaatgattatg 149  Q
    ||| |||||| ||  || ||||||| ||||||||    
T  15004864 gaaaaagagagaagaaactaactaagtgattatg 15004831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 1650053 - 1650020
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaa 174  Q
    |||||||||||||| |||||||||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 21623506 - 21623563
Alignment:
Q  157 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 21623563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 16232199 - 16232231
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  16232199 atgattatgataataactaacccccttacctta 16232231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 19610325 - 19610357
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  19610325 atgattatgataataactaacccccttacctta 19610357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 22274920 - 22275125
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  22274920 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 22275019  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22275020 gaacaagagaaaaagaattaactaaatgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 22275119  T
Q  216 gcttct 221  Q
    | ||||    
T  22275120 gattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 22284153 - 22284358
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| ||||||||    
T  22284153 acattaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgagttcatgataatcacttattctcataatcaaatatgcata 22284252  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22284253 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctat 22284352  T
Q  216 gcttct 221  Q
    | ||||    
T  22284353 gattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 9652953 - 9652796
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  9652953 acatcaaattaacatattcaaacatatctctacaacataaccacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 9652854  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  9652853 gaacaagaaaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 15633418 - 15633617
Alignment:
Q  22 aattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatagaacaa 121  Q
    |||||||||| |||||| |||| | |  |||  |||||||| |||||  ||||||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  15633418 aattaacatactcaaacttatcaccaaaacaagagcacgaaattcaagaattgggttcattataatcacttattctcataatcaattatgcatagaacaa 15633517  T
Q  122 gagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  15633518 gagaaaaagaattaactaagtgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 22 - 172
Target Start/End: Original strand, 25213252 - 25213403
Alignment:
Q  22 aattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatagaa-ca 120  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||    
T  25213252 aattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatca 25213351  T
Q  121 agagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 172  Q
    ||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  25213352 agagaaaaagaattaatcaaatgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 21274106 - 21273949
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  21274106 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 21274007  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||| ||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||    
T  21274006 gaatcaagagaaaaagaattaatcaaatgattatgataaagactaa-ccccttacctta 21273949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 20627270 - 20627190
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20627270 atgattatgataaagactaaccccgttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 19794661 - 19794581
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  19794661 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 43642913 - 43642833
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43642913 atgattatgataaagactaacctccttcccttaattatctccaactattagctctagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 7321716 - 7321872
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| |||| |||| |||||||||||||||  |||||||||  ||| ||| ||||||  |||  ||  |||||||||    
T  7321716 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaatagtcacttattcaaataagcacgtatgcatag 7321815  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
     | ||||||  |  |||||||||| ||||||| || ||  |||||||||||||||||    
T  7321816 gaaaagagagtagaaattaactaagtgattataatgaattctaacccccttacctta 7321872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 19666843 - 19666884
Alignment:
Q  136 actaaatgattatgataaaaactaacccccttaccttaatta 177  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  19666843 actaaatgattatgatgaattctaacccccttaccttaatta 19666884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaa 174  Q
    |||||||||||||| |||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 43646232 - 43646289
Alignment:
Q  157 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 43646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 463043 - 463075
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  463043 atgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 3798552 - 3798520
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  3798552 atgattatgataataactaacccccttacctta 3798520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 8944153 - 8944185
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  8944153 atgattatgataataactaacccccttacctta 8944185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 12635817 - 12635785
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  12635817 atgattatgataataactaacccccttacctta 12635785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 12641591 - 12641559
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  12641591 atgattatgataataactaacccccttacctta 12641559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 12728699 - 12728731
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  12728699 atgattatgataataactaacccccttacctta 12728731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 16935900 - 16935932
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  16935900 atgattatgataataactaacccccttacctta 16935932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 17006560 - 17006592
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  17006560 atgattatgataataactaacccccttacctta 17006592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 22863235 - 22863267
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  22863235 atgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 36982396 - 36982364
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  36982396 atgattatgataaagactaacccccttacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 42177918 - 42177886
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  42177918 atgattatgataataactaacccccttacctta 42177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 80062 - 80267
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  80062 acatcaaattaacatattcaaacatatctctaccacataagcacaaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 80161  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  80162 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctat 80261  T
Q  216 gcttct 221  Q
    | ||||    
T  80262 gattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 1937074 - 1936869
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  1937074 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 1936975  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  1936974 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctat 1936875  T
Q  216 gcttct 221  Q
    | ||||    
T  1936874 gattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 32494103 - 32493898
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  32494103 acatcaaattaacatattcaaacatatctctacaacataaacacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 32494004  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32494003 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 32493904  T
Q  216 gcttct 221  Q
    | ||||    
T  32493903 gattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 126613 - 126818
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  126613 acatcaaattaacatattcaaacatatctctgcaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 126712  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  126713 gaacaatagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctat 126812  T
Q  216 gcttct 221  Q
    | ||||    
T  126813 gattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 111326 - 111121
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||||||||    
T  111326 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaatattgggttcatgataatcacttattttcataatcaattatgcata 111227  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||    
T  111226 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctat 111127  T
Q  216 gcttct 221  Q
    | ||||    
T  111126 gattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 3049780 - 3049937
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  3049780 acatcaaattaacatattcaaacatatctctacaatataaacacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 3049879  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3049880 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 2029119 - 2029276
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  2029119 acatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 2029218  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  2029219 gaacaagagaaaaaaaattaactaaatgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 42056346 - 42056188
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  42056346 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 42056247  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  42056246 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 2190243 - 2190085
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  2190243 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtacatgataatcacttattctcataatcaattatgcata 2190144  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  2190143 gaatcaagagaaaaagaattaaccaaatgattatgataaaaactaaccgccttacctta 2190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 34 - 169
Target Start/End: Complemental strand, 15516901 - 15516765
Alignment:
Q  34 caaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatagaa-caagagaaaaagaa 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  15516901 caaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaa 15516802  T
Q  133 ttaactaaatgattatgataaaaactaacccccttac 169  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  15516801 ttaaccaaatgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 3060271 - 3060344
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3060271 atgattatgataaagacttacccccttaccttcattatctccaactattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 7283987 - 7283908
Alignment:
Q  142 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    |||||||||| ||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||| ||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcctatgattct 7283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 13352151 - 13352306
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| | ||||||||| |||| |||| |||||||||||||| | |||||||||  ||||||| ||||||  |||  || ||||||||||    
T  13352151 catcaaattaacatactgaaacatatcactacaacatgagcacgaatttcaagggttgggttcacaataatcacttattcaaataaacacttatgcatag 13352250  T
Q  117 aacaagagaaaaagaattaactaaatgattatg-ataaaaactaacccccttacct 171  Q
    || |||||| ||  || ||| ||| ||||||||  | ||| |||||||||||||||    
T  13352251 aaaaagagagaagaaactaattaagtgattatgcttgaaatctaacccccttacct 13352306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 39291565 - 39291457
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| |||| |||| |||||||||||||||  || ||||||  ||||||| ||||||  |||   | ||||||||||    
T  39291565 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttaggttcacaataatcacttattcaaataagtacttatgcatag 39291466  T
Q  117 aacaagaga 125  Q
    || ||||||    
T  39291465 aaaaagaga 39291457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 13377849 - 13377924
Alignment:
Q  139 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    ||||||||||||| ||  ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  13377849 aaatgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13377924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 13389693 - 13389750
Alignment:
Q  157 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 13389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 17223846 - 17223797
Alignment:
Q  157 ctaacccccttaccttaattatctccaactattagctctagcttcacttt 206  Q
    ||||||||||||||||||||||| |||| | ||||| | |||||||||||    
T  17223846 ctaacccccttaccttaattatcaccaattcttagcccaagcttcacttt 17223797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 25124445 - 25124482
Alignment:
Q  136 actaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||| || ||||||||||||||||||    
T  25124445 actaaatgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 13758677 - 13758709
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  13758677 atgattatgataataactaacccccttacctta 13758709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 15862226 - 15862258
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  15862226 atgattatgataataactaacccccttacctta 15862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 15927875 - 15927907
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  15927875 atgattatgataataactaacccccttacctta 15927907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 16212071 - 16212103
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  16212071 atgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 18979970 - 18979938
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  18979970 atgattatgataataactaacccccttacctta 18979938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 36052971 - 36053003
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  36052971 atgattatgataaagactaacccccttacctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 21860209 - 21860414
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  21860209 acatcaaattaacatattcaaacatatctctaccacataagtacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 21860308  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21860309 gaacaagagaaaaagaattaaccaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 21860408  T
Q  216 gcttct 221  Q
    | ||||    
T  21860409 gattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 44035028 - 44034829
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||| ||||| |||||| || |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  44035028 acatcaaattaacatattcaaacatatatctacaacataaacaagaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 44034929  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44034928 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 15861483 - 15861327
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  15861483 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 15861384  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 172  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  15861383 gaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 41218667 - 41218808
Alignment:
Q  80 atgataatcatttattctcatagtcaattatgcatagaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatc 179  Q
    |||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  41218667 atgagaatcacttattcccataatcaattatgcatagaacaagagaaaaagaattaactaaatgatcatgatgaaaactaacccccttaccttaattatc 41218766  T
Q  180 tccaactattagctctagcttcacttttgctcctatgcttct 221  Q
     |||||||||||||| ||||||||||||||||||||| ||||    
T  41218767 accaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 22367216 - 22367296
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattc 96  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  22367216 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 22367296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 41394527 - 41394610
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttctcca 224  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  41394527 atgattatgataaagactaacccccttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcca 41394610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 27675120 - 27675191
Alignment:
Q  143 gattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    ||||||||||||  |||||||||||||||||||||||||||| |  |||| | ||||||||||| |||||||    
T  27675120 gattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcactttagctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 45051726 - 45051759
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaa 174  Q
    |||||||||||||| |||||||||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 37844406 - 37844374
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  37844406 atgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 46523695 - 46523727
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  46523695 atgattatgataataactaacccccttacctta 46523727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 55513068 - 55513273
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||||||||||    
T  55513068 acatcgaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttatttccataatcaattatgcata 55513167  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55513168 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 55513267  T
Q  216 gcttct 221  Q
    | ||||    
T  55513268 gattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 3992748 - 3992953
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| |||||||||||| | ||||||||||| |||||||||||||    
T  3992748 acatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaaggttgagttcatgataattacttattctcataatcaattatgcata 3992847  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3992848 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 3992947  T
Q  216 gcttct 221  Q
    | ||||    
T  3992948 gattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 7854180 - 7854385
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  7854180 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 7854279  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  7854280 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctat 7854379  T
Q  216 gcttct 221  Q
    | ||||    
T  7854380 gattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 17956041 - 17955832
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  17956041 acatcaaattaacatattcagacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcgattatgcata 17955942  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagct----ctagcttcacttttgctc 211  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||    
T  17955941 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttaattatctccaactattagctctacctagcttcacttttgctc 17955842  T
Q  212 ctatgcttct 221  Q
    ||||| ||||    
T  17955841 ctatgattct 17955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 45581830 - 45582034
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  45581830 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcatag 45581929  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaa-cccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  45581930 aacaagagaaaaagaattaactaaatgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca-tttttctcctat 45582028  T
Q  216 gcttct 221  Q
    | ||||    
T  45582029 gattct 45582034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 54038181 - 54037976
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||| ||||| | |||||||||||| ||||| |||| |||||||||||||| |||||| |||| |||||||||||||    
T  54038181 acatcaaattaacatattcaaacatatatctacaatataagcacgaatgtcaaacattgagttcatgataatcacttattcccataatcaattatgcata 54038082  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  54038081 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctat 54037982  T
Q  216 gcttct 221  Q
    | ||||    
T  54037981 gattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 2844389 - 2844594
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||| ||||| |  ||||| |||||||||||||||||||||||||||||||||||||||  |||||| |||| |||||||||||||    
T  2844389 acatcaaattaacatattaaaacaaaaatctacaacataagcacgaatttcaaagattgggttcatgataatcgcttattcccataatcaattatgcata 2844488  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2844489 gaataagagaaaaagaatcaactaaatgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctat 2844588  T
Q  216 gcttct 221  Q
    | ||||    
T  2844589 gattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 30153140 - 30153297
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  30153140 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 30153239  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30153240 gaacaagagaaaaagaattaattaaatgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 28558370 - 28558526
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |    
T  28558370 catcaaattaacatattcaaacatatctctatcacataagcacgaatttcaaagattaggttcatgataatcacttattctcataatcaattatgcatgg 28558469  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28558470 aacaagagaaaaagaattaactaaatgattatgataaaaactaaccctcttacctta 28558526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 23492571 - 23492728
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  23492571 acatcaaattaacacattcaaacatatctctacaacataagcaagaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 23492670  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23492671 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 33342079 - 33342236
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  33342079 acatcaaattaacatattcaaacatatctctaccacattagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 33342178  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  33342179 gaacaagagaaaaagaattaaccaaatgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 54685358 - 54685202
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  54685358 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 54685259  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 172  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||    
T  54685258 gaacaagagaaaaagaattaaccaaatgattatcataaagactaacccacttacctt 54685202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 53771239 - 53771397
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  53771239 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 53771338  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  53771339 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 38168112 - 38168269
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  38168112 acatcaaattaacatattcaaacatatttctacaacataagtacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 38168211  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  38168212 gaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 16261651 - 16261809
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  16261651 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattacgcata 16261750  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  16261751 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 18970119 - 18970277
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||| | ||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||| ||||||  ||| ||| |||||||||    
T  18970119 acatcaaattaacatacttaaacatatcactacaacatgagcacgaatttcaaagattgggttcataataatcacttattcaaataatcacttatgcata 18970218  T
Q  116 gaacaagagaaaaagaattaactaaatgattatga-taaaaactaacccccttacctta 173  Q
    ||| |||||||||  || ||||||| || |||||| | ||| |||||||||||||||||    
T  18970219 gaaaaagagaaaagaaactaactaagtggttatgattgaaatctaacccccttacctta 18970277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 19232089 - 19232169
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  19232089 atgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 15857195 - 15857120
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 216  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  15857195 atgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 16744073 - 16743990
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttctcca 224  Q
    ||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  16744073 atgattatggtaaagactaacctcgttaccttaattatctccaactattagctctagcttcactttagctcctatgattctcca 16743990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 15550797 - 15550986
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| |||| |||| |||||||||||||||  |||||||||  ||||||| ||||||  ||   || |||||||||     
T  15550797 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaattagcacttatgcataa 15550896  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 206  Q
    ||  |||||  |  |||||||||| |||||||||| ||  |||||||||||| |||||||||| |||| |  |||| | |||||||||||    
T  15550897 aaagagagagtagaaattaactaagtgattatgatgaattctaacccccttatcttaattatcaccaattcctagcccaagcttcacttt 15550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 48421776 - 48421855
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattc 96  Q
    ||||||||||||||| ||||||||||| |||| |||| |||| |||||||||||||||||||||  ||||||| ||||||    
T  48421776 catcaaattaacatactcaaacatatcactacaacatgagcatgaatttcaaagattgggttcacaataatcacttattc 48421855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 38810943 - 38810868
Alignment:
Q  139 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    ||||||||||||| ||  ||||||||||||||||| ||||| |||| |  |||| | ||||||||||| |||||||    
T  38810943 aaatgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctccta 38810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 13301401 - 13301323
Alignment:
Q  136 actaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    |||||||||||||||| ||  ||||||||||||||||||||| | | || |  |||| | ||||||||||| |||||||    
T  13301401 actaaatgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 13312057 - 13311979
Alignment:
Q  136 actaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    |||||||||||||||| ||  ||||||||||||||||||||| | | || |  |||| | ||||||||||| |||||||    
T  13312057 actaaatgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaagcttcactttagctccta 13311979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 15615137 - 15615170
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaa 174  Q
    |||||||||||||| |||||||||||||||||||    
T  15615137 atgattatgataaagactaacccccttaccttaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 17205019 - 17205076
Alignment:
Q  157 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 17205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 51961068 - 51961031
Alignment:
Q  136 actaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||| || ||||||||||||||||||    
T  51961068 actaaatgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 2050115 - 2050147
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  2050115 atgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 8268682 - 8268650
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  8268682 atgattatgataataactaacccccttacctta 8268650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 8275782 - 8275750
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  8275782 atgattatgataataactaacccccttacctta 8275750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 14842519 - 14842487
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  14842519 atgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 18911300 - 18911332
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  18911300 atgattatgataataactaacccccttacctta 18911332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 19260781 - 19260749
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  19260781 atgattatgataaagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 176; Significance: 6e-95; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 6140 - 5941
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  6140 acatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 6041  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6040 gaacaagagaaaaagaattaactatatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 27 - 215
Target Start/End: Complemental strand, 5923 - 5735
Alignment:
Q  27 acatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatagaacaagagaa 126  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  5923 acatattcaaacacatctctacaacagaagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaa 5824  T
Q  127 aaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5823 aaagaattaactatatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 176; Significance: 6e-95; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 166319 - 166116
Alignment:
Q  18 atcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcataga 117  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  166319 atcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 166220  T
Q  118 acaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgc 217  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  166219 acaagagaaaaagaattaactagatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatga 166120  T
Q  218 ttct 221  Q
    ||||    
T  166119 ttct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 162233 - 162036
Alignment:
Q  18 atcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcataga 117  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  162233 atcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcataga 162134  T
Q  118 acaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  162133 acaagagaaaaagaattaactagatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 116485 - 116410
Alignment:
Q  139 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  116485 aaatgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 116410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 31337 - 31132
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  31337 acatcaaattaacatattcaaacacatgtctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 31238  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31237 gaacaagagaaaatgaattaactaaatgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 31138  T
Q  216 gcttct 221  Q
    | ||||    
T  31137 gattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 174; Significance: 9e-94; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 41507 - 41712
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  41507 acatcaaattaacatattcaaacacatgtctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 41606  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41607 gaacaagagaaaatgaattaactaaatgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 41706  T
Q  216 gcttct 221  Q
    | ||||    
T  41707 gattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 174; Significance: 9e-94; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 24716919 - 24716714
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||    
T  24716919 acatcaaattaacatattcaaacatatctctaccatataaccacgaatttcaaagatcgggttcatgataatcacttattctcataatcaattatgcata 24716820  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24716819 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctat 24716720  T
Q  216 gcttct 221  Q
    | ||||    
T  24716719 gattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 274642 - 274846
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  274642 catcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcatag 274741  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 216  Q
     ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  274742 gacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 274841  T
Q  217 cttct 221  Q
     ||||    
T  274842 attct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 641207 - 641003
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  641207 catcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcatag 641108  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 216  Q
     ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  641107 gacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 641008  T
Q  217 cttct 221  Q
     ||||    
T  641007 attct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 827013 - 826809
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  827013 catcaaattaacatattcaaacatatctctaccacatacgcacgaatttcaaagattgggttcatgataataacttattctcataatcaattatgcatag 826914  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 216  Q
     ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  826913 gacaagagaaaatggattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 826814  T
Q  217 cttct 221  Q
     ||||    
T  826813 attct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 39115473 - 39115678
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  39115473 acatcaaattaacatattcaaacatatctttacaacataagcacgaatgtcaaagattgggttcatgataatcacttattcccataatcaattatgcata 39115572  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  39115573 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctat 39115672  T
Q  216 gcttct 221  Q
    | ||||    
T  39115673 gattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 41506866 - 41506709
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  41506866 acatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 41506767  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41506766 gaacaagagaaaaagaattaactaaatgattatgatgaaaactaacccccttacctta 41506709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 24385809 - 24385652
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  24385809 acatcaaattatcatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcataataatcacttattctcataatcaattatgcata 24385710  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  24385709 gaacaagagaaaaggaattaactaaatgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 16404932 - 16404852
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16404932 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 21259547 - 21259391
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| |||| |||| |||||||||||||||  |||||||||  ||||||| ||||||  |||  || ||||||||||    
T  21259547 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatag 21259448  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    || ||||||  |  |||||||||| |||||||||| ||  |||||||||||||||||    
T  21259447 aaaaagagagtagaaattaactaagtgattatgatgaattctaacccccttacctta 21259391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 177
Target Start/End: Original strand, 17502360 - 17502521
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| |||| |||| ||||| ||||||||||||||||||||| ||||||| ||||||  |||  || ||||||||||    
T  17502360 catcaaattaacatactcaaacatatcactacaacatgagcacaaatttcaaagattgggttcataataatcacttattcaaataagcacttatgcatag 17502459  T
Q  117 aacaagagaaaaagaattaactaaatgattatg-ataaaaactaacccccttaccttaatta 177  Q
    || |||||| ||  || ||||||| ||||||||  | ||| |||||||||||| || |||||    
T  17502460 aaaaagagagaagaaactaactaagtgattatgcttgaaatctaacccccttatctcaatta 17502521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 23218076 - 23218208
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||  ||||||| ||||||  |||  || ||||||||||    
T  23218076 catcaaattaacatactcaaacatatcactaccacataagcacgaatttcaaaagttgggttcacaataatcacttattcaaataagcacttatgcatag 23218175  T
Q  117 aacaagagaaaaagaattaactaaatgattatg 149  Q
    || |||||| ||  || ||||||| ||||||||    
T  23218176 aaaaagagagaagaaactaactaagtgattatg 23218208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 22321503 - 22321437
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatg 82  Q
    ||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||    
T  22321503 acatcaaattaacatattcaaacatatctctacaacctgagcacgaatttcaaagattgggttcatg 22321437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 4234054 - 4234162
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| || | |||| ||||| ||||||||||||||||||||  ||||||| ||||||  |||  || ||||||||||    
T  4234054 catcaaattaacatactcaaacatatcactgcaacatgagcacaaatttcaaagattgggttcacaataatcacttattcaaataagcacttatgcatag 4234153  T
Q  117 aacaagaga 125  Q
    || ||||||    
T  4234154 aaaaagaga 4234162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 173
Target Start/End: Complemental strand, 31194251 - 31194217
Alignment:
Q  139 aaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||||    
T  31194251 aaatgattatgatgaaaactaacccccttacctta 31194217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 13662214 - 13662182
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  13662214 atgattatgataataactaacccccttacctta 13662182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 13720877 - 13720845
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  13720877 atgattatgataataactaacccccttacctta 13720845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 16873000 - 16872968
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  16873000 atgattatgataataactaacccccttacctta 16872968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 43373424 - 43373392
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  43373424 atgattatgataaagactaacccccttacctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 25119264 - 25119059
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||| |||| |||||||||||||    
T  25119264 acatcaaattaacatattcaaacatatctctaccacataagcacgaattttcaagattgggttcatgataatcacttattcccataatcaattatgcata 25119165  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25119164 gaacaagagaaaaagaattaaccaaatgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctat 25119065  T
Q  216 gcttct 221  Q
    | ||||    
T  25119064 gattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 5682584 - 5682380
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  5682584 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 5682485  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  5682484 gaacaagaggaaaa-aattaactaaatgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctat 5682386  T
Q  216 gcttct 221  Q
    | ||||    
T  5682385 gattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 14951960 - 14952117
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  14951960 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 14952059  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14952060 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 15272369 - 15272211
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  15272369 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 15272270  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  15272269 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 15136010 - 15135907
Alignment:
Q  71 attgggttcatgataatcatttattctcatagtcaattatgcatagaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttac 169  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  15136010 attgggttcatgataatcacttattctcataatcaattatgcatagaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttac 15135911  T
Q  170 ctta 173  Q
    ||||    
T  15135910 ctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 54118200 - 54118120
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  54118200 atgattatgatgaagactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 19559557 - 19559719
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||  ||||||||||| |||| |||| |||| ||||||||||  |||||| ||| ||||||| ||||||  |||  || |||||||||    
T  19559557 acatcaaattaacatgctcaaacatatcactacaacatgagcaggaatttcaaaagttgggtacataataatcacttattcaaataagcacttatgcata 19559656  T
Q  116 gaacaagagaaaaagaattaactaaatgattatg-ataaaaactaacccccttaccttaatta 177  Q
    ||| |||||| ||  |||||||||| ||||||||  | ||| ||||||||||||||| |||||    
T  19559657 gaaaaagagagaagaaattaactaattgattatgcttgaaatctaacccccttacctcaatta 19559719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 49071885 - 49071994
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||| ||||||||||| |||| | || |||||||||||||| | |||||||||  || |||| ||||||  |||  || |||||||||    
T  49071885 acatcaaattaacatactcaaacatatcactacaatatgagcacgaatttcaacggttgggttcacaatgatcacttattcaaataagcacttatgcata 49071984  T
Q  116 gaacaagaga 125  Q
    ||| ||||||    
T  49071985 gaaaaagaga 49071994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 34177691 - 34177617
Alignment:
Q  22 aattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattc 96  Q
    |||||||||| ||||||||||| |||| |||| |||||||||||  |||||||| ||||  ||||||| ||||||    
T  34177691 aattaacatactcaaacatatcactacaacatgagcacgaattttcaagattggattcacaataatcacttattc 34177617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 41165883 - 41165808
Alignment:
Q  139 aaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    ||||||||||||| ||  ||||||||||||| ||||||||| |||| |  |||| | ||||||||||| |||||||    
T  41165883 aaatgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctccta 41165808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 174
Target Start/End: Original strand, 14996445 - 14996478
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaa 174  Q
    ||||||||||||| ||||||||||||||||||||    
T  14996445 atgattatgataataactaacccccttaccttaa 14996478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 7132014 - 7131982
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  7132014 atgattatgataataactaacccccttacctta 7131982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 13246737 - 13246769
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  13246737 atgattatgataaagactaacccccttacctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 15287194 - 15287162
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  15287194 atgattatgataataactaacccccttacctta 15287162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 15294303 - 15294271
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  15294303 atgattatgataataactaacccccttacctta 15294271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 17145606 - 17145574
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  17145606 atgattatgataataactaacccccttacctta 17145574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 20001030 - 20001062
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  20001030 atgattatgataataactaacccccttacctta 20001062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 32 - 221
Target Start/End: Original strand, 42568 - 42754
Alignment:
Q  32 ttcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatagaacaagagaaaaaga 131  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  42568 ttcaaccatatctctaccacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaacaagagaaaaaga 42667  T
Q  132 attaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||    
T  42668 attaactaaatgattatgataaaaactaacccccttacct---ttatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 508 - 304
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  508 acatcaaattaacatattcaaatatatctctacaacataagcacaaatttcaaatattgggttcatgataatcacttattctcataatcaattatgcata 409  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    ||||||||| |||||||||||||| |||||||||||||| | ||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  408 gaacaagag-aaaagaattaactagatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctat 310  T
Q  216 gcttct 221  Q
    | ||||    
T  309 gattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 30292 - 30497
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||| |||| |||||||||||||    
T  30292 acatcaaattaacatattcaaacatatctctacaacataagcatgaatttcaaagatagggttcatgataatcacttattcccataatcaattatgcata 30391  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 215  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||    
T  30392 gaacaagagaaaaataattaactaaatgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttttgcttctat 30491  T
Q  216 gcttct 221  Q
    | ||||    
T  30492 gattct 30497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 11342883 - 11343039
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  11342883 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 11342982  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11342983 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 11343039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 2032008 - 2032165
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  2032008 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 2032107  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  2032108 gaacaagagaaaaagaattaactaaacgattatgatgaaaactaacccccttacctta 2032165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 21650893 - 21651050
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| |||||| |    
T  21650893 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaactatgcaca 21650992  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  21650993 gaacaagagaaaaagaattaaccaaatgattatgataaatattaacccccttacctta 21651050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 21205124 - 21205268
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  21205124 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 21205223  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaa 160  Q
    |||||||||||||||||||||| |||||||||||||||| |||||    
T  21205224 gaacaagagaaaaagaattaaccaaatgattatgataaagactaa 21205268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 16105847 - 16105999
Alignment:
Q  22 aattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatagaa-ca 120  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||    
T  16105847 aattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatca 16105946  T
Q  121 agagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  16105947 agagaaaaagaattaatcaaatgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 11584374 - 11584448
Alignment:
Q  142 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 216  Q
    |||||||||| ||  ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 22662731 - 22662653
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttatt 95  Q
    ||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||  ||||||| |||||    
T  22662731 catcaaattaacatattcaaatatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcacttatt 22662653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 25005019 - 25005165
Alignment:
Q  21 aaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatagaaca 120  Q
    ||||||||| | ||||||||||| || | |||| ||||||||||||||||||||||||||  ||||||| ||||||   |   || |||| |||| ||||    
T  25005019 aaattaacacactcaaacatatcacttcaacatgagcacgaatttcaaagattgggttcacaataatcacttattcaattgagcacttattcatacaaca 25005118  T
Q  121 agagaaaaagaattaactaaatgattatgataaaaactaacccccttac 169  Q
    |  |||||  | | ||||||||||||||||| || ||||||||||||||    
T  25005119 attgaaaa--actaaactaaatgattatgatgaagactaacccccttac 25005165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 7425631 - 7425663
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  7425631 atgattatgataataactaacccccttacctta 7425663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 23507270 - 23507302
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  23507270 atgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 35791047 - 35791015
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  35791047 atgattatgataataactaacccccttacctta 35791015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 55779 - 55936
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  55779 acatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 55878  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55879 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 70 - 173
Target Start/End: Complemental strand, 108179 - 108075
Alignment:
Q  70 gattgggttcatgataatcatttattctcatagtcaattatgcatagaac-aagagaaaaagaattaactaaatgattatgataaaaactaaccccctta 168  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||||||    
T  108179 gattgggttcatgataatcacttattctcataatcaattatgcatagaatgaagagaaaaagaattaaccaaatgattatgataaagactaaccccctta 108080  T
Q  169 cctta 173  Q
    |||||    
T  108079 cctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 104555 - 104477
Alignment:
Q  136 actaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    |||||||||||||||| ||  ||||||| ||||||||||||| | | || | ||||| | ||||||||||| |||||||    
T  104555 actaaatgattatgatgaattctaacccacttaccttaattagcacaaattcttagcccaagcttcactttagctccta 104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 17459 - 17304
Alignment:
Q  18 atcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcataga 117  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  17459 atcaaattaacatattcaaacatatctctaccacataagcactaatttcaaagattgggttcatgataatcaattattctcataatcaattatgcataga 17360  T
Q  118 acaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  17359 acaagagaaaaagaattacctaaatgattatgataaagactaacccgcttacctta 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 15 - 173
Target Start/End: Complemental strand, 6601 - 6443
Alignment:
Q  15 gacatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcat 114  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  |||| ||||| ||||||||||||    
T  6601 gacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataagcacctattatcataatcaattatgcat 6502  T
Q  115 agaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6501 agaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 12574 - 12418
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| | |||||| |||| ||||||||||||||    
T  12574 catcaaattaacatattcaaacatatctctacaacataagcacaaatttcaaagattgggttcatgataataacttattcccataatcaattatgcatag 12475  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12474 aacaaaagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 10040 - 9882
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaa-ttatgcat 114  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||    
T  10040 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattttcataatcaatttatgcat 9941  T
Q  115 agaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  9940 agaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 13443 - 13285
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  13443 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcata 13344  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  13343 gaatcaagagaaaaagaattaaccaaatgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 1035 - 878
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||| ||||| | |||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  1035 acatcaaattaacatattaaaacaaacctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 936  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  935 gaacaagagaaaaagaattaactaaatgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 4504 - 4346
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||    
T  4504 acatcaaattaacatatttaaacatatctctacaacataagcactaatttcaaagattgggttcatgataatcacttattcccataatcaattatgcata 4405  T
Q  116 gaa-caagagaaaaagaattaactaaatgattatgataaaaactaacccccttacctta 173  Q
    |||  |||||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  4404 gaatgaagagaaaaagaattaaccaaatgattatgataaagtctaacccccttacctta 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 85 - 5
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattc 96  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  85 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggttcatgataatcacttattc 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 172
Target Start/End: Original strand, 130760 - 130911
Alignment:
Q  22 aattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatagaa-ca 120  Q
    ||||||| ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||    
T  130760 aattaacgtatccaaacatatctctacaacatgagcacgaatttcaaagattgggttcatgataatcacttattctcataatcaattatgcatagaatca 130859  T
Q  121 agagaaaaagaattaactaaatgattatgataaaaactaacccccttacctt 172  Q
    ||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  130860 agagaaaaagaattaatcaaatgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 193545 - 193396
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcata 115  Q
    |||||||||||||||||||||||||||||||         ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  193545 acatcaaattaacatattcaaacatatctct---------gcacgaatttcaatgattgggttcatgataatcacttattctcataatcaattatgcata 193455  T
Q  116 gaacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaa 174  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  193454 gaacaagagaaaaagaattaaccaaatgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 15147 - 15232
Alignment:
Q  16 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcata 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15147 acatcaaattaacatattcaaacatatctctacgacataagcacgaatttcaaagattgggttcatgataatcacttattcccata 15232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 914 - 882
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  914 atgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 44170 - 44009
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||||| ||||||  ||||||| ||||||  ||| ||| ||||||||||    
T  44170 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattaggttcacaataatcacttattcaaataatcacttatgcatag 44071  T
Q  117 aacaagagaaaaagaattaactaaatgattatga-taaaaactaacccccttaccttaatta 177  Q
     | |||||| ||  |||||||||| ||||||||| | ||| |||||||| |||||| |||||    
T  44070 caaaagagagaagaaattaactaagtgattatgattgaaatctaaccccgttacctcaatta 44009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 1557 - 1371
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgcatag 116  Q
    ||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||||  ||||||||||||||   ||  || |||| ||||     
T  1557 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattgggttcacaataatcatttattcaattaagcacttattcatac 1458  T
Q  117 aacaagagaaaaagaattaactaaatgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttt 206  Q
    |||||  ||||   | |  |||||||||||||||| ||  ||||||||||||||| ||||||| |||| |  |||||| |||||||||||    
T  1457 aacaaatgaaa---actacactaaatgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcacttt 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 1701 - 1780
Alignment:
Q  142 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 19881 - 19802
Alignment:
Q  142 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 24185 - 24106
Alignment:
Q  142 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||| ||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 15398 - 15319
Alignment:
Q  142 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

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Target: scaffold0077; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 36869 - 36836
Alignment:
Q  141 atgattatgataaaaactaacccccttaccttaa 174  Q
    |||||||||||||| |||||||||||||||||||    
T  36869 atgattatgataaagactaacccccttaccttaa 36836  T

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Target: scaffold0049 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 20493 - 20572
Alignment:
Q  142 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgcttct 221  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||| ||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcctatgattct 20572  T

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Target: scaffold0876 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 94 - 164
Alignment:
Q  142 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcc 212  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

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Target: scaffold0310 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 6335 - 6261
Alignment:
Q  142 tgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatg 216  Q
    |||||||||| || |||||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcctatg 6261  T

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Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  142 tgattatgataaaaactaacccccttaccttaattatc 179  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

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Target: scaffold1295 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 305 - 384
Alignment:
Q  17 catcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggttcatgataatcatttattc 96  Q
    ||||||||||||||| ||||||||||| |||| |||| |||| |||||||||||||||||||||  ||||||| ||||||    
T  305 catcaaattaacatactcaaacatatcactacaacatgagcaagaatttcaaagattgggttcacaataatcacttattc 384  T

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Target: scaffold0079 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 3897 - 3732
Alignment:
Q  17 catcaaattaacatattcaaacatatct----ctaccacataagcacgaatttcaaagattgggttcatgataatcatttattctcatagtcaattatgc 112  Q
    ||||||||||||||| |||||||||| |    |||| |||| |||||||||||||||  |||| ||||  ||||||| ||||||  |||  || ||||||    
T  3897 catcaaattaacatactcaaacatatatatcactacaacatgagcacgaatttcaaaagttggtttcacaataatcacttattcaaataagcacttatgc 3798  T
Q  113 atagaacaagagaaaaagaattaactaaatgattatg-ataaaaactaacccccttaccttaatta 177  Q
    |||||| |||||| ||  || ||||||| ||||||||  | ||| |||||||| |||||| |||||    
T  3797 atagaaaaagagagaagaaactaactaagtgattatgcttgaaatctaacccctttacctcaatta 3732  T

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Target: scaffold0413 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 173
Target Start/End: Complemental strand, 6024 - 5990
Alignment:
Q  139 aaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||| ||||||||||||||||||    
T  6024 aaatgattatgataaagactaacccccttacctta 5990  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 173
Target Start/End: Complemental strand, 57426 - 57392
Alignment:
Q  139 aaatgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||||| ||||||||||||||||||    
T  57426 aaatgattatgataaagactaacccccttacctta 57392  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 35816 - 35873
Alignment:
Q  157 ctaacccccttaccttaattatctccaactattagctctagcttcacttttgctccta 214  Q
    ||||||||||||||||||||||| |||| |  |||| | ||||||||||| |||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 35873  T

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Target: scaffold1500 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 1463 - 1431
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  1463 atgattatgataataactaacccccttacctta 1431  T

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Target: scaffold0761 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 1524 - 1492
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  1524 atgattatgataataactaacccccttacctta 1492  T

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Target: scaffold0498 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 9183 - 9215
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  9183 atgattatgataaagactaacccccttacctta 9215  T

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Target: scaffold0383 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 2700 - 2732
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  2700 atgattatgataataactaacccccttacctta 2732  T

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Target: scaffold0302 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 12418 - 12450
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  12418 atgattatgataaagactaacccccttacctta 12450  T

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Target: scaffold0266 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 1430 - 1462
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  1430 atgattatgataaagactaacccccttacctta 1462  T

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Target: scaffold0162 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 26372 - 26340
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  26372 atgattatgataaagactaacccccttacctta 26340  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

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Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

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Target: scaffold0124 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 146906 - 146938
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  146906 atgattatgataaagactaacccccttacctta 146938  T

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Target: scaffold0023 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 48903 - 48935
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  48903 atgattatgataaagactaacccccttacctta 48935  T

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Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 153956 - 153924
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    ||||||||||||| |||||||||||||||||||    
T  153956 atgattatgataataactaacccccttacctta 153924  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 247398 - 247366
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  247398 atgattatgataaagactaacccccttacctta 247366  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 272330 - 272362
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  272330 atgattatgataaagactaacccccttacctta 272362  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 128127 - 128095
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  128127 atgattatgataaagactaacccccttacctta 128095  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 172210 - 172242
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  172210 atgattatgataaagactaacccccttacctta 172242  T

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Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 177913 - 177945
Alignment:
Q  141 atgattatgataaaaactaacccccttacctta 173  Q
    |||||||||||||| ||||||||||||||||||    
T  177913 atgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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