View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9873_low_73 (Length: 249)
Name: NF9873_low_73
Description: NF9873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9873_low_73 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 40845790 - 40845550
Alignment:
| Q |
1 |
tctttgtactttcttagtcagacaactctacaggatttgtcttattgagttagcctactgcacaaaatgatagctccaattagaaaagggtttgaggttt |
100 |
Q |
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| T |
40845790 |
tctttgtactttcctagtcagacaactctacaggatatgtcttattgagttagcctactgcacaaaatgatagctccaattagaaaagggtttgaggttt |
40845691 |
T |
|
| Q |
101 |
tgttatttgagaatttctttttccttcctatcaatttctcgggggtcctctagaatactcatttttccctcgtttgaattatacaatatcaatcctgtca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
40845690 |
tgttatttgagaatttctttttccttcctatcaatttctcgcgcgtcctctggaatactcattttgccctcgtttgaattatacaatatcaatcctgtca |
40845591 |
T |
|
| Q |
201 |
aatcttataaatattttatagttgatatgaagttctctgct |
241 |
Q |
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|||||||||||||||||||||||||||||||| |||||||| |
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| T |
40845590 |
aatcttataaatattttatagttgatatgaaggtctctgct |
40845550 |
T |
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