View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9873_low_75 (Length: 249)
Name: NF9873_low_75
Description: NF9873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9873_low_75 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 39620437 - 39620677
Alignment:
| Q |
1 |
ccattgcataaactatagttccatagaccaaagcttgtaaaagaacatacgaaatttcgattagagcctgcatgaaaatatgaagattggattataaaga |
100 |
Q |
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| T |
39620437 |
ccattgcataaactatagttccatagaccaaagcttgtaaaagaacatacgaaatttcgattagagcctgcatgaaaatatgaagattggattataaaga |
39620536 |
T |
|
| Q |
101 |
aacatagataccgaagcaagtcatttatttatatgagaatataagtaaagactaaagaaaaccacttgcctgaccaaaagcatatgccagaggagaatac |
200 |
Q |
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| T |
39620537 |
aacatagataccgaagcaagtcatttatttatatgagaatataagtaaagactaaagaaaaccacttgcctgaccaaaagcatatgccagtggagaatac |
39620636 |
T |
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| Q |
201 |
attctggcagcattttccctatagaaaactgctctctctgc |
241 |
Q |
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| T |
39620637 |
attctggcagcattttccctatagaaaactgctctctctgc |
39620677 |
T |
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