View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9873_low_95 (Length: 234)

Name: NF9873_low_95
Description: NF9873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9873_low_95
NF9873_low_95
[»] chr2 (72 HSPs)
chr2 (1-234)||(5559467-5559700)
chr2 (147-234)||(2544389-2544476)
chr2 (138-197)||(19268066-19268125)
chr2 (39-129)||(38982998-38983087)
chr2 (53-105)||(32457226-32457278)
chr2 (46-129)||(30758726-30758808)
chr2 (53-119)||(12962775-12962840)
chr2 (53-129)||(35728477-35728553)
chr2 (53-129)||(10204986-10205061)
chr2 (49-105)||(28248942-28248998)
chr2 (138-193)||(7650196-7650251)
chr2 (54-129)||(7943453-7943527)
chr2 (58-128)||(3837428-3837497)
chr2 (39-129)||(4410776-4410865)
chr2 (39-105)||(12873806-12873872)
chr2 (39-129)||(34447503-34447591)
chr2 (48-105)||(28494787-28494844)
chr2 (57-122)||(41153128-41153192)
chr2 (145-233)||(19268099-19268187)
chr2 (53-105)||(29988975-29989027)
chr2 (66-105)||(5281204-5281243)
chr2 (38-105)||(38554456-38554523)
chr2 (39-105)||(22333524-22333590)
chr2 (55-105)||(32487073-32487123)
chr2 (51-129)||(33273981-33274058)
chr2 (139-224)||(23143493-23143578)
chr2 (139-224)||(23555283-23555368)
chr2 (144-233)||(33129113-33129202)
chr2 (53-105)||(11030205-11030257)
chr2 (139-191)||(21183408-21183460)
chr2 (53-105)||(28014356-28014408)
chr2 (46-105)||(11182171-11182230)
chr2 (139-234)||(25270863-25270958)
chr2 (139-234)||(27964291-27964385)
chr2 (38-105)||(30761461-30761528)
chr2 (139-234)||(31024178-31024273)
chr2 (54-105)||(33824433-33824484)
chr2 (38-105)||(39445078-39445145)
chr2 (139-193)||(23143565-23143619)
chr2 (139-193)||(23555355-23555409)
chr2 (139-200)||(1961381-1961442)
chr2 (133-234)||(5559430-5559531)
chr2 (146-234)||(35498160-35498248)
chr2 (53-105)||(2936376-2936428)
chr2 (138-234)||(13333453-13333549)
chr2 (138-234)||(41056894-41056990)
chr2 (138-233)||(2544357-2544452)
chr2 (54-105)||(5109446-5109497)
chr2 (133-184)||(7079371-7079422)
chr2 (139-222)||(15119784-15119867)
chr2 (139-234)||(15119815-15119910)
chr2 (145-200)||(15916746-15916801)
chr2 (145-196)||(26003448-26003499)
chr2 (139-234)||(27331797-27331892)
chr2 (138-233)||(33129080-33129175)
chr2 (134-233)||(41824263-41824361)
chr2 (39-129)||(9152378-9152467)
chr2 (133-191)||(11726576-11726634)
chr2 (39-105)||(11794532-11794598)
chr2 (68-129)||(920474-920534)
chr2 (145-234)||(3098139-3098228)
chr2 (139-184)||(11341977-11342022)
chr2 (53-105)||(29169848-29169901)
chr2 (139-224)||(32800714-32800799)
chr2 (40-105)||(43135106-43135171)
chr2 (139-191)||(3098207-3098259)
chr2 (143-191)||(6166104-6166152)
chr2 (139-191)||(14952846-14952898)
chr2 (139-191)||(25270937-25270989)
chr2 (53-105)||(36881610-36881662)
chr2 (139-191)||(38465796-38465848)
chr2 (139-191)||(41056969-41057021)
[»] chr8 (50 HSPs)
chr8 (124-233)||(17986233-17986342)
chr8 (139-233)||(17871802-17871896)
chr8 (145-233)||(17871776-17871864)
chr8 (145-234)||(2627212-2627301)
chr8 (48-105)||(8793802-8793859)
chr8 (145-224)||(6189682-6189761)
chr8 (48-129)||(16448797-16448877)
chr8 (48-129)||(35149676-35149756)
chr8 (53-105)||(5031547-5031599)
chr8 (145-233)||(17986207-17986295)
chr8 (53-129)||(42122979-42123054)
chr8 (54-129)||(3236390-3236464)
chr8 (139-230)||(26998676-26998767)
chr8 (153-215)||(37288578-37288640)
chr8 (48-105)||(40483291-40483348)
chr8 (53-105)||(7693046-7693098)
chr8 (53-129)||(8803288-8803363)
chr8 (53-105)||(24618971-24619023)
chr8 (139-234)||(13964426-13964521)
chr8 (53-128)||(15726773-15726846)
chr8 (39-105)||(10839846-10839911)
chr8 (40-105)||(8453595-8453660)
chr8 (139-224)||(31271580-31271665)
chr8 (54-107)||(32597512-32597565)
chr8 (53-106)||(43332643-43332696)
chr8 (139-199)||(13841855-13841915)
chr8 (132-191)||(27502901-27502960)
chr8 (140-234)||(5888374-5888468)
chr8 (145-234)||(7484655-7484744)
chr8 (145-230)||(26998711-26998796)
chr8 (66-129)||(36191773-36191833)
chr8 (139-200)||(41753765-41753826)
chr8 (145-233)||(9678759-9678846)
chr8 (139-191)||(10934684-10934736)
chr8 (54-129)||(40651283-40651355)
chr8 (139-234)||(7484625-7484719)
chr8 (66-105)||(10184577-10184616)
chr8 (139-234)||(11295671-11295766)
chr8 (139-198)||(24471191-24471250)
chr8 (146-233)||(36308529-36308615)
chr8 (134-200)||(3225852-3225918)
chr8 (152-234)||(6189654-6189736)
chr8 (51-105)||(16008534-16008588)
chr8 (139-200)||(5888343-5888404)
chr8 (153-234)||(21435690-21435771)
chr8 (48-129)||(34711141-34711220)
chr8 (69-129)||(1223183-1223242)
chr8 (133-193)||(7351252-7351311)
chr8 (49-105)||(24821900-24821956)
chr8 (139-191)||(34580579-34580631)
[»] chr5 (47 HSPs)
chr5 (139-234)||(13391569-13391664)
chr5 (139-233)||(25694154-25694248)
chr5 (139-234)||(7613365-7613460)
chr5 (145-233)||(25694128-25694216)
chr5 (139-214)||(22227039-22227114)
chr5 (48-129)||(5002148-5002228)
chr5 (39-102)||(34297173-34297236)
chr5 (39-105)||(13789731-13789797)
chr5 (145-222)||(32911482-32911560)
chr5 (139-200)||(32911564-32911626)
chr5 (39-105)||(33478190-33478256)
chr5 (39-105)||(38394511-38394577)
chr5 (53-105)||(21488296-21488348)
chr5 (54-129)||(22101968-22102042)
chr5 (51-102)||(36286070-36286121)
chr5 (139-233)||(13654548-13654641)
chr5 (39-105)||(18473558-18473624)
chr5 (139-200)||(10437709-10437770)
chr5 (68-129)||(18391526-18391586)
chr5 (139-224)||(31785923-31786008)
chr5 (37-105)||(919639-919707)
chr5 (145-233)||(4349123-4349210)
chr5 (133-193)||(8717786-8717846)
chr5 (138-234)||(17625678-17625774)
chr5 (54-105)||(13664960-13665011)
chr5 (186-233)||(32911509-32911556)
chr5 (145-191)||(13356218-13356264)
chr5 (139-189)||(14772555-14772605)
chr5 (54-103)||(10228152-10228201)
chr5 (68-129)||(36434706-36434766)
chr5 (139-191)||(25792927-25792979)
chr5 (137-200)||(3100410-3100473)
chr5 (54-105)||(16619101-16619152)
chr5 (39-129)||(29299417-29299507)
chr5 (139-233)||(13391538-13391632)
chr5 (59-105)||(14221864-14221910)
chr5 (169-234)||(4349147-4349212)
chr5 (48-129)||(11932030-11932110)
chr5 (161-234)||(12922410-12922483)
chr5 (134-191)||(18652846-18652903)
chr5 (139-200)||(33075137-33075198)
chr5 (152-233)||(33821062-33821143)
chr5 (174-234)||(1100095-1100155)
chr5 (133-193)||(7613437-7613497)
chr5 (145-193)||(8717731-8717779)
chr5 (146-234)||(11795750-11795838)
chr5 (146-234)||(14274172-14274259)
[»] chr1 (62 HSPs)
chr1 (123-226)||(50308674-50308777)
chr1 (157-234)||(15290603-15290680)
chr1 (145-234)||(28038865-28038954)
chr1 (145-233)||(29043467-29043555)
chr1 (53-129)||(15342997-15343072)
chr1 (53-129)||(38737944-38738019)
chr1 (39-105)||(38040275-38040341)
chr1 (139-233)||(50308635-50308729)
chr1 (54-107)||(39748633-39748686)
chr1 (39-105)||(11386238-11386303)
chr1 (39-105)||(26924296-26924362)
chr1 (39-129)||(27819310-27819400)
chr1 (145-234)||(28038840-28038929)
chr1 (53-105)||(26760186-26760238)
chr1 (53-105)||(34332559-34332611)
chr1 (53-96)||(8971320-8971363)
chr1 (139-234)||(9675973-9676068)
chr1 (140-199)||(26158716-26158775)
chr1 (140-199)||(26172014-26172073)
chr1 (139-234)||(46906899-46906994)
chr1 (68-129)||(6661574-6661634)
chr1 (134-191)||(14967306-14967363)
chr1 (48-105)||(44939074-44939131)
chr1 (48-105)||(47912825-47912882)
chr1 (48-129)||(49944893-49944973)
chr1 (37-105)||(519830-519898)
chr1 (57-129)||(37178970-37179041)
chr1 (69-105)||(52427376-52427412)
chr1 (54-105)||(26070907-26070958)
chr1 (133-200)||(34953897-34953964)
chr1 (39-105)||(6793677-6793743)
chr1 (139-233)||(9676005-9676099)
chr1 (53-102)||(2351146-2351195)
chr1 (39-116)||(5891725-5891801)
chr1 (39-104)||(18744639-18744704)
chr1 (48-129)||(24305673-24305753)
chr1 (48-105)||(38590074-38590131)
chr1 (145-226)||(41007723-41007804)
chr1 (138-198)||(6156640-6156700)
chr1 (139-191)||(24981922-24981974)
chr1 (146-234)||(41007691-41007779)
chr1 (139-191)||(52923404-52923456)
chr1 (145-200)||(3549851-3549906)
chr1 (53-96)||(7375195-7375238)
chr1 (54-105)||(15286023-15286074)
chr1 (139-234)||(24981848-24981943)
chr1 (146-233)||(38847317-38847403)
chr1 (138-200)||(9902574-9902636)
chr1 (139-233)||(15290617-15290711)
chr1 (133-191)||(19175669-19175727)
chr1 (75-105)||(29256634-29256664)
chr1 (115-233)||(31889082-31889199)
chr1 (139-200)||(20273192-20273253)
chr1 (146-191)||(41649546-41649591)
chr1 (139-200)||(48083511-48083572)
chr1 (139-191)||(3013691-3013743)
chr1 (140-200)||(14885327-14885387)
chr1 (140-200)||(14885485-14885545)
chr1 (139-191)||(39420325-39420377)
chr1 (161-233)||(42761272-42761344)
chr1 (39-103)||(49944832-49944896)
chr1 (54-105)||(50155311-50155363)
[»] chr6 (40 HSPs)
chr6 (46-129)||(30627883-30627965)
chr6 (39-129)||(3064943-3065032)
chr6 (54-129)||(9077646-9077720)
chr6 (139-233)||(3203678-3203772)
chr6 (39-129)||(28863380-28863469)
chr6 (55-105)||(12450434-12450484)
chr6 (53-105)||(17265734-17265786)
chr6 (139-234)||(16120972-16121067)
chr6 (54-105)||(30895267-30895318)
chr6 (126-200)||(31996571-31996645)
chr6 (39-105)||(33119903-33119969)
chr6 (56-129)||(2972224-2972296)
chr6 (139-224)||(6797416-6797501)
chr6 (133-234)||(16121003-16121104)
chr6 (133-234)||(26527191-26527292)
chr6 (133-193)||(3203750-3203810)
chr6 (45-105)||(10283299-10283359)
chr6 (53-129)||(28630813-28630888)
chr6 (53-128)||(2937093-2937166)
chr6 (139-234)||(14173397-14173492)
chr6 (139-234)||(14177933-14178028)
chr6 (139-234)||(34379773-34379868)
chr6 (139-233)||(33689236-33689330)
chr6 (145-234)||(15517128-15517217)
chr6 (139-191)||(12104752-12104804)
chr6 (139-191)||(16199127-16199179)
chr6 (54-105)||(8052939-8052990)
chr6 (54-105)||(12999769-12999820)
chr6 (52-103)||(21162412-21162463)
chr6 (2-40)||(5051568-5051606)
chr6 (145-191)||(13463013-13463059)
chr6 (39-89)||(25538047-25538097)
chr6 (133-191)||(29419868-29419926)
chr6 (133-191)||(34170079-34170137)
chr6 (133-190)||(10258305-10258362)
chr6 (139-191)||(26527271-26527323)
chr6 (53-105)||(27909058-27909110)
chr6 (139-183)||(31714542-31714586)
chr6 (145-233)||(31996512-31996600)
chr6 (133-225)||(32254868-32254960)
[»] chr3 (47 HSPs)
chr3 (49-124)||(9197090-9197164)
chr3 (55-129)||(36985216-36985289)
chr3 (55-129)||(37010655-37010728)
chr3 (39-105)||(51517040-51517106)
chr3 (39-105)||(53441906-53441972)
chr3 (48-129)||(13622495-13622575)
chr3 (139-200)||(37897754-37897815)
chr3 (39-128)||(43449019-43449107)
chr3 (37-105)||(21662969-21663037)
chr3 (145-233)||(29241519-29241607)
chr3 (53-129)||(44518096-44518171)
chr3 (53-129)||(45010763-45010838)
chr3 (38-105)||(54537526-54537593)
chr3 (138-200)||(39579565-39579627)
chr3 (44-105)||(19649583-19649644)
chr3 (145-218)||(40169054-40169127)
chr3 (53-102)||(43343532-43343581)
chr3 (53-105)||(52865034-52865086)
chr3 (139-226)||(331844-331931)
chr3 (54-129)||(23222972-23223046)
chr3 (139-234)||(44382850-44382945)
chr3 (48-99)||(50354325-50354376)
chr3 (139-234)||(54595797-54595892)
chr3 (39-101)||(8266318-8266380)
chr3 (133-191)||(10872673-10872731)
chr3 (39-105)||(12064908-12064974)
chr3 (54-128)||(35099069-35099142)
chr3 (138-200)||(40639867-40639929)
chr3 (133-234)||(7823905-7824006)
chr3 (139-200)||(40639781-40639842)
chr3 (139-191)||(50603594-50603646)
chr3 (66-105)||(9236170-9236209)
chr3 (54-105)||(20028485-20028535)
chr3 (139-234)||(21217204-21217299)
chr3 (163-198)||(26143502-26143537)
chr3 (39-105)||(51723461-51723527)
chr3 (131-233)||(54273438-54273540)
chr3 (145-226)||(23444319-23444400)
chr3 (139-200)||(52215952-52216013)
chr3 (139-191)||(20625246-20625298)
chr3 (139-191)||(21217173-21217225)
chr3 (133-201)||(22496952-22497020)
chr3 (161-205)||(25823667-25823711)
chr3 (139-191)||(30519679-30519731)
chr3 (139-191)||(36571455-36571507)
chr3 (146-234)||(40470432-40470520)
chr3 (139-191)||(41253938-41253990)
[»] scaffold0065 (2 HSPs)
scaffold0065 (145-234)||(36892-36981)
scaffold0065 (153-234)||(36875-36956)
[»] chr7 (45 HSPs)
chr7 (145-234)||(28752092-28752181)
chr7 (39-129)||(28677316-28677405)
chr7 (147-233)||(29168402-29168488)
chr7 (54-129)||(6838435-6838509)
chr7 (39-129)||(36245375-36245464)
chr7 (39-105)||(41850679-41850745)
chr7 (53-105)||(39153300-39153352)
chr7 (39-105)||(11668014-11668080)
chr7 (39-105)||(13807321-13807387)
chr7 (40-105)||(2680858-2680923)
chr7 (54-105)||(2399966-2400017)
chr7 (58-129)||(8566099-8566169)
chr7 (50-129)||(10462437-10462514)
chr7 (46-105)||(29365627-29365686)
chr7 (54-103)||(2523784-2523833)
chr7 (139-200)||(31115681-31115742)
chr7 (68-129)||(40142801-40142861)
chr7 (145-233)||(28752118-28752206)
chr7 (149-225)||(29168380-29168456)
chr7 (54-129)||(45533290-45533364)
chr7 (57-103)||(7456436-7456482)
chr7 (140-234)||(7701226-7701320)
chr7 (134-200)||(23818426-23818492)
chr7 (53-103)||(24163354-24163404)
chr7 (51-96)||(28298946-28298991)
chr7 (48-105)||(45441444-45441501)
chr7 (75-128)||(47987211-47987263)
chr7 (48-105)||(48082881-48082938)
chr7 (139-191)||(2943219-2943271)
chr7 (139-191)||(25245224-25245276)
chr7 (54-105)||(9979815-9979865)
chr7 (139-230)||(10095726-10095817)
chr7 (171-234)||(16777930-16777993)
chr7 (139-234)||(37491280-37491375)
chr7 (139-234)||(43813132-43813227)
chr7 (139-234)||(46022555-46022650)
chr7 (56-119)||(48838382-48838444)
chr7 (51-129)||(30869197-30869274)
chr7 (139-191)||(7701195-7701247)
chr7 (145-233)||(8169136-8169223)
chr7 (139-191)||(12274816-12274868)
chr7 (146-234)||(16777906-16777994)
chr7 (138-234)||(30138826-30138922)
chr7 (161-233)||(42117489-42117561)
chr7 (139-191)||(43103079-43103131)
[»] chr4 (63 HSPs)
chr4 (153-234)||(2401078-2401159)
chr4 (33-105)||(21554101-21554174)
chr4 (48-129)||(48195950-48196030)
chr4 (53-105)||(25477558-25477610)
chr4 (53-105)||(36132648-36132700)
chr4 (53-105)||(48361135-48361187)
chr4 (38-105)||(32714267-32714334)
chr4 (50-129)||(35429783-35429861)
chr4 (37-116)||(45828412-45828490)
chr4 (134-196)||(43616221-43616283)
chr4 (39-129)||(44111744-44111833)
chr4 (53-129)||(42670824-42670899)
chr4 (38-119)||(43117850-43117932)
chr4 (54-105)||(4386219-4386270)
chr4 (54-105)||(30191979-30192030)
chr4 (139-234)||(38382014-38382109)
chr4 (54-104)||(3162979-3163029)
chr4 (39-129)||(17284734-17284823)
chr4 (145-226)||(2401053-2401134)
chr4 (51-92)||(41328718-41328759)
chr4 (69-129)||(696379-696438)
chr4 (69-129)||(764677-764736)
chr4 (53-105)||(19150806-19150858)
chr4 (138-234)||(34616253-34616349)
chr4 (53-105)||(50121520-50121572)
chr4 (54-101)||(9044401-9044448)
chr4 (54-129)||(44061402-44061476)
chr4 (145-224)||(46518468-46518547)
chr4 (147-234)||(52914013-52914100)
chr4 (55-129)||(8347705-8347778)
chr4 (39-105)||(16412317-16412383)
chr4 (139-200)||(6975005-6975066)
chr4 (49-122)||(31977753-31977825)
chr4 (68-105)||(42169071-42169108)
chr4 (145-234)||(47181597-47181686)
chr4 (68-105)||(47943810-47943847)
chr4 (145-234)||(48402424-48402513)
chr4 (68-105)||(53225672-53225709)
chr4 (145-234)||(56364339-56364428)
chr4 (134-234)||(21142092-21142192)
chr4 (139-191)||(47181566-47181618)
chr4 (138-234)||(47308152-47308248)
chr4 (39-107)||(48361051-48361119)
chr4 (145-184)||(8311325-8311364)
chr4 (139-234)||(19934645-19934740)
chr4 (139-234)||(29006873-29006968)
chr4 (139-206)||(30938910-30938977)
chr4 (139-234)||(37255720-37255814)
chr4 (53-104)||(37991499-37991550)
chr4 (54-105)||(45096657-45096708)
chr4 (139-234)||(54164820-54164915)
chr4 (139-234)||(55936025-55936120)
chr4 (53-107)||(42169124-42169178)
chr4 (139-200)||(55416370-55416432)
chr4 (48-105)||(16412242-16412299)
chr4 (133-193)||(33150615-33150676)
chr4 (161-222)||(35967431-35967492)
chr4 (44-105)||(55951666-55951727)
chr4 (132-200)||(2582808-2582876)
chr4 (39-107)||(8347644-8347712)
chr4 (139-191)||(16578590-16578642)
chr4 (145-193)||(33004184-33004232)
chr4 (161-233)||(34321421-34321493)
[»] scaffold0123 (1 HSPs)
scaffold0123 (54-128)||(28101-28176)
[»] scaffold0029 (2 HSPs)
scaffold0029 (144-233)||(15831-15920)
scaffold0029 (149-234)||(41283-41368)
[»] scaffold0136 (1 HSPs)
scaffold0136 (39-105)||(16612-16678)
[»] scaffold0236 (1 HSPs)
scaffold0236 (68-129)||(16679-16739)
[»] scaffold0121 (1 HSPs)
scaffold0121 (146-233)||(17449-17535)
[»] scaffold0001 (1 HSPs)
scaffold0001 (38-105)||(156766-156833)
[»] scaffold0633 (1 HSPs)
scaffold0633 (146-191)||(5405-5450)
[»] scaffold0110 (1 HSPs)
scaffold0110 (68-105)||(1561-1598)
[»] scaffold0086 (1 HSPs)
scaffold0086 (68-105)||(1520-1556)
[»] scaffold0028 (1 HSPs)
scaffold0028 (36-105)||(71845-71914)
[»] scaffold0778 (1 HSPs)
scaffold0778 (53-105)||(5285-5336)


Alignment Details
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 5559700 - 5559467
Alignment:
Q  1 atagaaatattctcttaaagtttgtgcatttaattaattactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatg 100  Q
    ||||||||| ||||||||| |||||||||||||||||||| | | | || | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5559700 atagaaatagtctcttaaaatttgtgcatttaattaattatttcctccgatcctatttataagacatatttgatttttttgattcattgcataaatgatg 5559601  T
Q  101 tattttggtttatattttaaacaagataccctctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||||||||||||||| ||||||| |||| | ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  5559600 tattttggtttatattctaaacaatatactccctccaattactgttataagcaaaaatcaactttttatattcattcattaaattatgtatttagtctat 5559501  T
Q  201 gttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||||||||||| ||||||||||||||||    
T  5559500 gttattgacaaaatacaacatttaataaatgaat 5559467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 2544476 - 2544389
Alignment:
Q  147 ataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||| |||||| |||||||| |||||  ||||||||| |||||||    
T  2544476 ataaacaaaaatcaactttttaggttcattcattaaatgatgtatttggtctatattattgaccaaataagtcatttaatgaatgaat 2544389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 19268066 - 19268125
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtc 197  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  19268066 atcactgttataagcaaaaatcaactttttaagttcattcaataaatgatgtatttagtc 19268125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 38982998 - 38983087
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||| | |||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||| || |||||| || |||||||||    
T  38982998 tactccctccggtcctatttataaaaaatatttgacttttttgattcattgcataaatgatgtatttt-gtctatattctagacaagatac 38983087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 32457226 - 32457278
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32457226 ctatttataagaaatatttgacttttttgattcattgcataaatgatgtattt 32457278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 30758726 - 30758808
Alignment:
Q  46 ttcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||| |||||||||||| ||||||||||||||| |||||||||||||||| |||| |||||| |||| |||| |||||||||    
T  30758726 ttcggtcctatttataagaaatatttgactttttttattcattgcataaatggtgta-tttggtctatactttagacaagatac 30758808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 12962840 - 12962775
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatatttta 119  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  12962840 ctatttataagaaacatttgacttttttgattcattgcataaatgatgta-tttggtctatatttta 12962775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 35728477 - 35728553
Alignment:
Q  53 ctatttataagacatatttga-cttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| || |||||| |||||| ||||||||||||    
T  35728477 ctatttataagaaatatttgatcttttttgattcattgcataaatgatata-tttggtctatattctaaacaagatac 35728553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 10205061 - 10204986
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||||||| ||| || ||||||||| |||||||||    
T  10205061 ctatttataagaaatatttgactcttttgattcattgtataaatgatgta-tttagtctatattttagacaagatac 10204986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 28248942 - 28248998
Alignment:
Q  49 ggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  28248942 ggttctatttataagaaatatttgacttttttgattaattgcataaataatgtattt 28248998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 7650196 - 7650251
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtattt 193  Q
    |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||    
T  7650196 atcactattgtaagcaaaaatcaactttttaagttcattcattaaatgatgtattt 7650251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 7943453 - 7943527
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| || |||||| |||||| || |||||||||    
T  7943453 tatttataagagatatttgactttttttattcattgcataaatgatata-tttggtctatattgtagacaagatac 7943527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 3837428 - 3837497
Alignment:
Q  58 tataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagata 128  Q
    ||||||| | |||||| |||||||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  3837428 tataagaaacatttgatttttttgattcattgcataaataatgta-tttggtctatattttaaacaagata 3837497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 4410776 - 4410865
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||| || | |||||||||||| | |||| || ||||||||| ||||||||||||||||| |||| | |||||||||||||||||||    
T  4410776 tactccatccgatcctatttataagaaacatttaacctttttgatttattgcataaatgatgta-tttgatctatattttaaacaagatac 4410865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 12873872 - 12873806
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| ||| ||| ||||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  12873872 tactcccttctgttatatttataaaaaatatttgactttattgattcattgcataaatgatgtattt 12873806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 34447503 - 34447591
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||| ||| |||| |||||||||||| | |||||||||||||  |||||||||||||| ||||| |||||||||||||||| |||||||||    
T  34447503 tacttcatccggtcctatttataagaaa-atttgacttttttagttcattgcataaataatgta-tttggtttatattttagacaagatac 34447591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 28494844 - 28494787
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||||| |||||    
T  28494844 cggttctatttataagaaacatttgatttttttgattcattgcataaatgatatattt 28494787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 41153128 - 41153192
Alignment:
Q  57 ttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaac 122  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||| |||||    
T  41153128 ttataagaaacatttgacttttttgattcattgcataaatgatgta-tttggtctatattataaac 41153192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 19268187 - 19268099
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||||| ||||||||||||| ||||||| |  |||| ||||||||  ||||| |||||||| |||||||||||||| | ||||||    
T  19268187 ttataagcaacaatcaactttttaggttcatttaagaaataatgtatttcatctatattattgactaaatacatcatttattgaatgaa 19268099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 29989027 - 29988975
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||||||||||    
T  29989027 ctatttagaagaaacatttgacttttttgattcattgcataaatgatgtattt 29988975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 5281204 - 5281243
Alignment:
Q  66 atatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5281204 atatttgacttttttgattcattgcataaatgatgtattt 5281243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 38554456 - 38554523
Alignment:
Q  38 ttactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||| ||| |||||||||||| | |||||||| |||||||||||| ||||||| ||||||||    
T  38554456 ttactccatttggtcctatttataagaaacatttgactattttgattcattacataaataatgtattt 38554523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 22333524 - 22333590
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| | |||||||||||| | |||  |||||||||||||||||||||||| ||||||||    
T  22333524 tactccattcgatcctatttataagaaacattaaacttttttgattcattgcataaataatgtattt 22333590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 32487123 - 32487073
Alignment:
Q  55 atttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  32487123 atttataagaagtatttgacttttttgattcattgcataaataatgtattt 32487073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 33273981 - 33274058
Alignment:
Q  51 ttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||||| |  ||||||||||||||||||||| ||||||||| || ||||| |||||||||| |||| ||||    
T  33273981 ttctatttataagaaaactttgacttttttgattcattgtataaatgatata-tttggcttatattttagacaacatac 33274058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 23143493 - 23143578
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcattta 224  Q
    ||||| |||||||||||||||||||||||| ||||| | | ||||| ||||||||  ||||  |||| ||| ||||||||||||||    
T  23143493 tcactattataagcaaaaatcaactttttaggttcacttaataaatgatgtatttgatctacattatggaccaaatacatcattta 23143578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 23555283 - 23555368
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcattta 224  Q
    ||||| |||||||||||||||||||||||| ||||| | | ||||| ||||||||  ||||  |||| ||| ||||||||||||||    
T  23555283 tcactattataagcaaaaatcaactttttaggttcacttaataaatgatgtatttgatctacattatggaccaaatacatcattta 23555368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 33129202 - 33129113
Alignment:
Q  144 gttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||||||||||| ||||  ||||||||||||||||||||| ||||| ||||||| | |||| ||| | ||| || ||||||| ||||||    
T  33129202 gttataagcaaaactcaatattttaagttcattcattaaataatgtaattagtctttattatagactacatatattatttaatgaatgaa 33129113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 11030205 - 11030257
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||| ||||||| | ||||||||||||||||||||| ||||||||||||||||    
T  11030205 ctatatataagaaacatttgacttttttgattcattacataaatgatgtattt 11030257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 21183460 - 21183408
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    |||||||||||||||||||||||| |||||  |||||||||||||| ||||||    
T  21183460 tcactgttataagcaaaaatcaacattttagattcattcattaaatgatgtat 21183408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 28014408 - 28014356
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | ||||||| ||||| ||||||||||||||||||||||||    
T  28014408 ctatttataagaaacatttgaccttttttattcattgcataaatgatgtattt 28014356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 11182171 - 11182230
Alignment:
Q  46 ttcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| |||| ||||||  | ||||||||||||||||||||| ||||||||||||||||    
T  11182171 ttcggtcctatatataagcaacatttgacttttttgattcattccataaatgatgtattt 11182230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 25270863 - 25270958
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||  | |||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  25270863 tcactattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 25270958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 27964291 - 27964385
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| ||||||||||||||  |||||||| ||||||||| |||||||||||| | ||||||  ||| | | | |||||||||||| |||||||||    
T  27964291 tcacttttataagcaaaaattgactttttaggttcattcaataaattatgtatgtggtctat-atatggtctagatacatcatttattaaatgaat 27964385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 30761528 - 30761461
Alignment:
Q  38 ttactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||| | |||| |||||||||||| | |||||||||||||||||||||||| |||  ||||||||    
T  30761528 ttactccctccggtcctatttataagaaacatttgacttttttgattcattgcacaaaatatgtattt 30761461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 31024178 - 31024273
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||| |||||| | ||| ||  ||  ||| | |||||||||||||| |||||||    
T  31024178 tcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaat 31024273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 33824484 - 33824433
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||| |||||    
T  33824484 tatttataagaaatatttgacttttctgattcattgtataaatgatatattt 33824433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 39445145 - 39445078
Alignment:
Q  38 ttactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||| || |||||||||||||| ||  ||||||||||| ||| |||||||||||| |||||||    
T  39445145 ttactccatccgattctatttataagaaattattgacttttttaatttattgcataaatggtgtattt 39445078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 23143619 - 23143565
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtattt 193  Q
    ||||| |||||||||||||||||||||||| ||| ||||| ||||| ||||||||    
T  23143619 tcactattataagcaaaaatcaactttttaggtttattcaataaatgatgtattt 23143565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 23555409 - 23555355
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtattt 193  Q
    ||||| |||||||||||||||||||||||| ||| ||||| ||||| ||||||||    
T  23555409 tcactattataagcaaaaatcaactttttaggtttattcaataaatgatgtattt 23555355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 1961442 - 1961381
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||| |||||| | ||||||    
T  1961442 tcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtctat 1961381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 5559430 - 5559531
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatga 232  Q
    |||| |||||||||||||| ||||||||| ||||||  |||||| |||||||  ||||||| ||| ||   || ||| |||||||| ||||||| |||||    
T  5559430 ctccgatcactgttataagtaaaaatcaattttttagattcatttattaaatgttgtattttgtcaataacatagactaaatacataatttaatgaatga 5559529  T
Q  233 at 234  Q
    ||    
T  5559530 at 5559531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 234
Target Start/End: Complemental strand, 35498248 - 35498160
Alignment:
Q  146 tataagcaaaaatcaactttttaag-ttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||| ||||||||| ||||| || |||||||| ||||| |||||||| |||||| |||||||  |||||||||||||| | |||||||    
T  35498248 tataagtaaaaatcaatttttttaggttcattcaataaatgatgtatttggtctat-ttattgattaaatacatcatttattgaatgaat 35498160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 2936428 - 2936376
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | |||||||||||||||||||||| ||| ||||| |||||    
T  2936428 ctatttataagaaacatttgacttttttgattcattggatagatgatatattt 2936376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 13333453 - 13333549
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||| |||||||||||||||||| |||||  | |||||||||||| |||||| |||| | | ||||  ||   |||||||||||||| |||||||    
T  13333453 atcactattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtttgtattataaaccgcatacatcatttaatcaatgaat 13333549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 41056894 - 41056990
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||| |||||||||||||||||  |||||  | |||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  41056894 atcactattataagcaaaaatcaatgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 41056990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 2544357 - 2544452
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||| |||||| ||||||| || ||||||  |||||||||||||| |  ||||| ||| ||  ||| ||| |||||||||||||||| ||||||    
T  2544357 atcactattataaacaaaaattaattttttagattcattcattaaatgacttatttggtcaataatatagaccaaatacatcatttaatgaatgaa 2544452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 5109497 - 5109446
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| |||||||||||||||||||||  | |||||| ||||||||    
T  5109497 tatttataagaaatatttgacttttttgattcaaagtataaattatgtattt 5109446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 7079371 - 7079422
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaat 184  Q
    |||| |||||| |||||||||||||||||| |||||| ||||| ||||||||    
T  7079371 ctccgatcactattataagcaaaaatcaacattttaaattcatccattaaat 7079422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 15119784 - 15119867
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatt 222  Q
    ||||| |||||||||||||| ||| |||||  |||||||||||||| |||||| | ||||||  ||  ||||| ||||||||||    
T  15119784 tcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtctataataaagacaatatacatcatt 15119867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 15119910 - 15119815
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| ||||||||||||||| || |||||  || ||||||| ||| |||||| | |||| | |||| ||| | |||||||||||||| |||||||    
T  15119910 tcactattataagcaaaaatctacattttagatttattcatttaatgatgtatattgtctttattatagaccacatacatcatttaatgaatgaat 15119815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 15916746 - 15916801
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||||||||||||||||  |||||  |||||||||||||| |||||| ||||||||    
T  15916746 ttataagcaaaaatcaatattttagattcattcattaaataatgtatgtagtctat 15916801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 26003448 - 26003499
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagt 196  Q
    |||||||||||||||||  ||||| ||||||||||||||| |||||| ||||    
T  26003448 ttataagcaaaaatcaatattttaggttcattcattaaatgatgtatgtagt 26003499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 27331892 - 27331797
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||  |||||||| | ||| |||||| |||||| | ||||  |||| ||| || ||||||| |||||||    
T  27331892 tcactattataagcaaaaatcaacattttagattcattcaattaatgatgtatgtagtctttattataaacaatatatattatttaatgaatgaat 27331797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 33129080 - 33129175
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||| ||||||| |||||||||  ||||| ||||||||||||||| || ||| ||||||||  ||  ||| || ||||| ||||||| ||||||    
T  33129080 atcactattataagtaaaaatcaatattttaggttcattcattaaataatatatgtagtctataataaagactaattacattatttaatgaatgaa 33129175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 41824263 - 41824361
Alignment:
Q  134 tccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||||| ||||||||||||||  | ||||||  |||||||| |||||||||||| |||| |||  ||| ||| | |||||||||||| | ||||||    
T  41824263 tccaatcactattataagcaaaaattcattttttagattcattcaataaattatgtatgtagtttat-atatagaccacatacatcatttattgaatgaa 41824361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 9152378 - 9152467
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||| | |||| ||||||| |||| | ||||||||||||||| |||||  |||| ||||||| |||||| ||||||||| || ||||||    
T  9152378 tactccctccggtcctatttacaagaaacatttgacttttttgagtcattaaataattgatgta-tttggtctatattttagactagatac 9152467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 11726634 - 11726576
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||| |||||||||||||| ||| |||||  |||||||||||||| ||||||    
T  11726634 ctccagtcactattataagcaaaaattaacattttagattcattcattaaatgatgtat 11726576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 11794598 - 11794532
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | |||| |||||||||||| | |||| || |||||| ||||| |||||||||||||||||    
T  11794598 tactccctccggtcctatttataagaaacattttacatttttgtttcatggcataaatgatgtattt 11794532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 920534 - 920474
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||||||||| ||| ||||||| ||||| ||| || |||||| ||||||||||||    
T  920534 atttgacttttttgatttatttcataaataatgta-tttagtctatattctaaacaagatac 920474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 3098139 - 3098228
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||||||| |||||  | |||| ||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  3098139 ttataagcaaaaatcaacgttttagatacatttattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 3098228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 11341977 - 11342022
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaat 184  Q
    |||||||||||||||||||| ||| |||||| || |||||||||||    
T  11341977 tcactgttataagcaaaaattaacattttaaatttattcattaaat 11342022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 29169848 - 29169901
Alignment:
Q  53 ctatttataagacatatttgac-ttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| ||||||||| |||||| ||||||||  ||||||||||||||    
T  29169848 ctatttataagaaatatttgactttttttaattcattgtctaaatgatgtattt 29169901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 32800714 - 32800799
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcattta 224  Q
    ||||| |||||||||||||||||| |||||| || ||| | |||||||||||| |  ||||| |||| |||   ||||||||||||    
T  32800714 tcactattataagcaaaaatcaaccttttaatttaatttaataaattatgtatgtgatctatattatagaccgcatacatcattta 32800799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 43135171 - 43135106
Alignment:
Q  40 actccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||| |||||||||||||| | | || |||||||||||| |||  |||| ||||||||||    
T  43135171 actccattcgattctatttataagaaacaattcacttttttgatttattaaataattgatgtattt 43135106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 3098259 - 3098207
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||| || |||||  |||||||||||||| ||||||    
T  3098259 tcactattataagcaaaaatctacattttagattcattcattaaatgatgtat 3098207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 6166152 - 6166104
Alignment:
Q  143 tgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    |||||||| |||||||| || |||||| |||||||| ||||||||||||    
T  6166152 tgttataaacaaaaatctacattttaaattcattcaataaattatgtat 6166104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 14952898 - 14952846
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||| |  ||||||| |||||||||||||||| ||||||    
T  14952898 tcactcttataagcaaaatttgacttttttagttcattcattaaatgatgtat 14952846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 25270989 - 25270937
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||| || |||||  |||||||||||||| ||||||    
T  25270989 tcactattataagcaaaaatctacattttagattcattcattaaatgatgtat 25270937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 36881662 - 36881610
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||| |||| | ||||||||||||||||||||| ||||||| ||| ||||    
T  36881662 ctatttacaagaaacatttgacttttttgattcattacataaataatgaattt 36881610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 38465796 - 38465848
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||||||| |||||  || ||||||||||| ||||||    
T  38465796 tcactattataagcaaaaatcaacattttagattaattcattaaatgatgtat 38465848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 41057021 - 41056969
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||| || |||||  |||||||||||||| ||||||    
T  41057021 tcactattataagcaaaaatctacattttagattcattcattaaatgatgtat 41056969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 17986342 - 17986233
Alignment:
Q  124 agataccctctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcattt 223  Q
    |||||| |||||| |||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  17986342 agatactctctccgatcactattataagtaaaaatcaactttttaggttcattcattaaatgatgtatttagtctatgttattgaccaaatacatcattt 17986243  T
Q  224 aataaatgaa 233  Q
    ||| ||||||    
T  17986242 aatgaatgaa 17986233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 17871896 - 17871802
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  17871896 tcactattataagcaaaaatcaattttttaggttcattcattaaatgatgtatttagtctatattattgaccaaatacatcatttaatgaatgaa 17871802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 17871776 - 17871864
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||  ||| ||| |||||||||||||||| ||||||    
T  17871776 ttataagcaaaaatcaactttttaggttcattcattaaatgatgtatttggtcaataatatagactaaatacatcatttaatgaatgaa 17871864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 2627301 - 2627212
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||| ||||||||| ||||||||||||||||||| |||||  |||||||||||||| |||||||| |||||||| ||||| | |||||||    
T  2627301 ttattagcaaaaattaactttttaagttcattcaataaatggtgtatttagtctatattattgaccaaatacattatttattgaatgaat 2627212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 8793859 - 8793802
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8793859 cggtcctatttataagaaatatttgacttttttgattcattgcataaatgatgtattt 8793802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 6189761 - 6189682
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcattta 224  Q
    |||||| ||||||||||| |||||  |||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||    
T  6189761 ttataaacaaaaatcaacgttttagattcattcaataaatgatgtatttagtctatattattgaccaaatacatcattta 6189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 16448797 - 16448877
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||| || | |||||||    
T  16448797 cggtcctatttataagaaacatttgacttttttgattcattgcataaatgatata-tttggtttatattctatataagatac 16448877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 35149676 - 35149756
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||| |||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||||||||    
T  35149676 cggtcctatttataagaaacatttgacttttttgattaattgcataaatgatgta-tttggtctatattctagacaagatac 35149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 5031599 - 5031547
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  5031599 ctatttataagaaacatttgacttttttgattcattgcataaatgatgtattt 5031547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 17986207 - 17986295
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||||| ||| ||   || ||| |||||||||||||||| ||||||    
T  17986207 ttataagtaaaaatcaactttataagttcattcattaaatgatgtatttggtcaataacatagactaaatacatcatttaatgaatgaa 17986295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 42122979 - 42123054
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||| |  |||||||||||||||||||||||||||||||||| |||||| |||||| || |||||||||    
T  42122979 ctatttataagaaacgtttgacttttttgattcattgcataaatgatgta-tttggtatatattctagacaagatac 42123054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 3236464 - 3236390
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||| |||||| || ||||||||| ||||||    
T  3236464 tatttataagaaatatttgacttttttaattcattgtataaatgatgta-tttggtctaaattttaaactagatac 3236390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 26998676 - 26998767
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaat 230  Q
    ||||| |||||| ||||||| || |||||| ||| ||| ||||||| |||||||| |||||  |||||||| ||||||||||||||||||||    
T  26998676 tcactattataaacaaaaattaattttttaggtttatttattaaatgatgtatttggtctacattattgaccaaatacatcatttaataaat 26998767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 37288578 - 37288640
Alignment:
Q  153 aaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaata 215  Q
    ||||||||| |||||| ||||||||||||||| |||||||| ||||||||||||||| |||||    
T  37288578 aaaaatcaattttttaggttcattcattaaatgatgtatttcgtctatgttattgaccaaata 37288640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 40483291 - 40483348
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||| |||||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  40483291 cggtcctatttataagaaatatttaacttttttaattcattgcataaatgatgtattt 40483348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 7693046 - 7693098
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  7693046 ctatttataagaaacattttacttttttgattcattgcataaatgatgtattt 7693098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 8803363 - 8803288
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||| | |||||| |||||||||||||||| ||||||||||||| |||||| |||||| || |||||||||    
T  8803363 ctatttataaaaaatatttaacttttttgattcattacataaatgatgta-tttggtctatattctagacaagatac 8803288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 24618971 - 24619023
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  24618971 ctatttataagaaacctttgacttttttgattcattgcataaatgatgtattt 24619023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 13964426 - 13964521
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||| |||||||| ||||| |||||| | |||||| |||| ||| |  ||||||||||| | |||||||    
T  13964426 tcactattataagcaaaaatcaacattttaaattcattcaataaatgatgtatgtggtctatattatagaccatgtacatcatttactcaatgaat 13964521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 15726773 - 15726846
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagata 128  Q
    |||||||||||| |||||||| |||||| ||| || |||||||||||||||||| || ||||||||||||||||||    
T  15726773 ctatttataagaaatatttga-ttttttaatttatcgcataaatgatgtatttt-gtatatattttaaacaagata 15726846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 10839911 - 10839846
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||| |||| |||||||||||| | |||| ||||||| |||||||||||||||||||||||||    
T  10839911 tactccatccggtcctatttataagaaacatttaacttttt-gattcattgcataaatgatgtattt 10839846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 8453595 - 8453660
Alignment:
Q  40 actccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||| |||||||||||||| || | |||||| |||||||||||||| ||||||| ||||||||    
T  8453595 actccatccggttctatttataggaaacatttgaattttttgattcattacataaataatgtattt 8453660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 31271665 - 31271580
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcattta 224  Q
    ||||| |||||||||||||||||||||| || || ||||| ||| | ||||||||||||| | |||||||  || |||||||||||    
T  31271665 tcactattataagcaaaaatcaacttttcaaatttattcaataagtgatgtatttagtctgtattattgatcaactacatcattta 31271580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 32597512 - 32597565
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttg 107  Q
    ||||||||||| | ||||||||||||||||||||||| |||| |||||||||||    
T  32597512 tatttataagaaacatttgacttttttgattcattgcgtaaacgatgtattttg 32597565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 43332696 - 43332643
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtatttt 106  Q
    |||||||||| | |||||||| ||||||||||||||||||||||||||| ||||    
T  43332696 ctatttataaaaaatatttgatttttttgattcattgcataaatgatgtttttt 43332643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 13841855 - 13841915
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtcta 199  Q
    ||||| ||||||||||||||  ||||||||| |||||||| ||||| ||||||||||||||    
T  13841855 tcactattataagcaaaaatttactttttaaattcattcaataaatgatgtatttagtcta 13841915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 27502901 - 27502960
Alignment:
Q  132 tctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||| |||||||||||||| ||| |||||| |||||||||||||| ||||||    
T  27502901 tctccgatcactattataagcaaaaattaacattttaaattcattcattaaatgatgtat 27502960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 5888468 - 5888374
Alignment:
Q  140 cactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||| ||||||||||||||| ||||| ||  |||||||| | ||| |||||| | |||| | |||| ||||| |||||||||||||| |||||||    
T  5888468 cactattataagcaaaaatctactttgtagattcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatgaat 5888374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 7484744 - 7484655
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||||||| |||||  |||||||||||||| |||||| | ||| ||  ||  ||| | |||||||||||||| |||||||    
T  7484744 ttataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaat 7484655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 26998796 - 26998711
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaat 230  Q
    ||||||| |||||| |||||||||| || ||| ||||||| |||||||| ||| ||  | | ||| ||||||||||||||||||||    
T  26998796 ttataagtaaaaattaactttttaaatttatttattaaatgatgtatttggtcaataatgtagaccaaatacatcatttaataaat 26998711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 36191773 - 36191833
Alignment:
Q  66 atatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||||||  ||||||||||||||||||||||| |   ||||||||| |||||||||    
T  36191773 atatttgacttttttctttcattgcataaatgatgtatttgg---tatattttatacaagatac 36191833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 41753765 - 41753826
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||| ||||| |||||| |||||||||||||| |||||| | ||||||    
T  41753765 tcactattataagcaaaattcaacattttaaattcattcattaaatgatgtatgtggtctat 41753826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 9678759 - 9678846
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||||||||||||||||||||||| ||  || | |||| ||||||||| |||||| ||||| || |||||||| ||||| | ||||||    
T  9678759 ttataagcaaaaatcaactttttaa-tttgtttaataaactatgtatttggtctatattattcaccaaatacataatttattcaatgaa 9678846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 10934736 - 10934684
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||| ||||||    
T  10934736 tcactattataagcaaaaatcaacattttagattcattcattaaatgatgtat 10934684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 40651355 - 40651283
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||| |||||||||||||||||||||  | |||||| ||||| ||| ||||||||| || |||||||||    
T  40651355 tatttataagaaatatttgacttttttgattca--gtataaataatgta-tttagtttatattatagacaagatac 40651283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 7484625 - 7484719
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||||||||||||| ||   |||||  |||||||||||||| |||||| | |||| | |||| ||| | |||||||||||||| |||||||    
T  7484625 tcactgttataagcaaaaa-cataattttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaat 7484719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 10184577 - 10184616
Alignment:
Q  66 atatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  10184577 atatttgactttttttattcattgtataaatgatgtattt 10184616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 11295671 - 11295766
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||  | |||||||||||| |||||| | |||| | ||||  || | || ||||||||||| |||||||    
T  11295671 tcactattataagcaaaaatcaacattttagatacattcattaaatgatgtatgtggtctttattataaaccacatgcatcatttaatgaatgaat 11295766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 24471191 - 24471250
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtct 198  Q
    ||||| |||||||||||||||||| |||||| | ||||||| |||| |||||| ||||||    
T  24471191 tcactattataagcaaaaatcaacattttaaatacattcataaaatgatgtatgtagtct 24471250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 36308529 - 36308615
Alignment:
Q  146 tataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||||||||| ||| ||||||||||| ||||||||||| |||||| | ||| || ||||  || | |||||||||| ||||||||||    
T  36308529 tataagcaaaattca-ctttttaagtttattcattaaatgatgtatgtggtccatattataaaccacatacatcattaaataaatgaa 36308615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 3225918 - 3225852
Alignment:
Q  134 tccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||||||| | |||||||||||||||||  ||||  ||||||||||||||| |||||| | ||||||    
T  3225918 tccaatcattattataagcaaaaatcaatatttttggttcattcattaaatgatgtatgtggtctat 3225852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 6189654 - 6189736
Alignment:
Q  152 caaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||||||||||| ||||||  | ||||| |||||||| ||| ||  ||| ||| |||||||||||||| | |||||||    
T  6189654 caaaaatcaactttttaggttcatcgaataaatgatgtatttggtcaataatatagactaaatacatcatttattgaatgaat 6189736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 16008534 - 16008588
Alignment:
Q  51 ttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||||| | ||||||||||||| ||  ||||||||||| ||||||||    
T  16008534 ttctatttataagaaacatttgacttttttaatctattgcataaataatgtattt 16008588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 5888343 - 5888404
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||||| ||| |||||  |||||||||||||| |||||| | ||||||    
T  5888343 tcactattataagcaaaaattaacgttttagattcattcattaaatgatgtatgttgtctat 5888404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 21435690 - 21435771
Alignment:
Q  153 aaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||  |||||| |||||||| |||||||||||| | |||| | || | ||||| |||||||||||| | |||||||    
T  21435690 aaaaatcaatgttttaaattcattcaataaattatgtatgtggtctttattgtagacaacatacatcatttattgaatgaat 21435771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 34711220 - 34711141
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||||||| | | |||  |||||||||||| ||||||| ||||||||| ||| |||||||||||| |||| ||||    
T  34711220 cggttctatttataaaaaaaatta-acttttttgatttattgcattaatgatgta-tttagtttatattttagacaaaatac 34711141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 1223242 - 1223183
Alignment:
Q  69 tttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||| |||| ||||||||||||||| ||||| |||||| ||||||||  |||||||||    
T  1223242 tttgactattttaattcattgcataaattatgta-tttggtctatatttttgacaagatac 1223183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 7351311 - 7351252
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtattt 193  Q
    |||| |||||||||||||||||||| |||  ||||| ||||||| ||||||| ||||||||    
T  7351311 ctcctatcactgttataagcaaaaa-caaacttttaggttcatttattaaatgatgtattt 7351252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 24821900 - 24821956
Alignment:
Q  49 ggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||||||| | |||| |||||||| ||| ||| ||||||| ||||||||    
T  24821900 ggttctatttataagaaacatttaacttttttaatttattacataaataatgtattt 24821956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 34580579 - 34580631
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||  | | ||||| ||||||||||||||||||||||    
T  34580579 tcactattataagcaaaaaaaatcattttaggttcattcattaaattatgtat 34580631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 13391664 - 13391569
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| | |||||||    
T  13391664 tcactgttataagcaaaaatcaactttttaggttcattcaataaattatgtatttagtctatattattgaccaaatacatcatttattgaatgaat 13391569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 25694248 - 25694154
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  25694248 tcactattataagcaaaaatcaactttctaggttcattcattaaatgatgtatttggtctatattattgacaaaatacatcatttaatgaatgaa 25694154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 7613365 - 7613460
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||| || |||||||||||||| |||||||||    
T  7613365 tcactattataagcaaaaatcaactttttaagttcattcattaaatgcagtatttagtctatattattaaccaaatacatcatttattaaatgaat 7613460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 25694128 - 25694216
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||| ||| ||  ||| ||| |||||||||||||||| ||||||    
T  25694128 ttataagcaaaaatcaactttctaggttcattcattaaatgatgtattttgtcaataatatagaccaaatacatcatttaatgaatgaa 25694216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 22227114 - 22227039
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaat 214  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||| || |||||||||||| |||||||| ||||    
T  22227114 tcactattataagcaaaaatcaacgttttaggttcattcattaaatgatatatttagtctatattattgaccaaat 22227039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 5002148 - 5002228
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||| |||||||||||| | ||||||||||||||||| ||||||||||||||||| |||| | ||||||||| |||||||||    
T  5002148 cggtcctatttataagaaacatttgacttttttgattaattgcataaatgatgta-tttgatctatattttagacaagatac 5002228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 34297173 - 34297236
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgta 102  Q
    |||||||| ||||  ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  34297173 tactccatccggtcttatttataagaaatatttgacttttttaattcattgcataaatgatgta 34297236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 13789731 - 13789797
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | |||| |||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  13789731 tactccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtattt 13789797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 32911482 - 32911560
Alignment:
Q  145 ttataagcaaaa-atcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatt 222  Q
    |||||||||||| |||||||||||| ||||||| ||||||| |||||||||||||||  ||| ||| ||||||||||||    
T  32911482 ttataagcaaaaaatcaactttttaggttcatttattaaatgatgtatttagtctataatatagactaaatacatcatt 32911560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 32911626 - 32911564
Alignment:
Q  139 tcactgttataagcaaaaa-tcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  32911626 tcactattataagcaaaaaatcaactttttaggttcattcattaaatgatgtatttagtctat 32911564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 33478256 - 33478190
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | |||| |||||||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  33478256 tactccctccggtcctatttataagaaacatttgacatttttgattcattgcataaatgatgtattt 33478190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 38394577 - 38394511
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| |||| | |||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  38394577 tactcccttcgatcctatttataagaaacattttacttttttgattcattgcataaatgatgtattt 38394511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 21488296 - 21488348
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  21488296 ctatttataagaaatatttgacttttttaattcattgcataaataatgtattt 21488348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 22102042 - 22101968
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||| ||||||||||||||||||| |||| |||||| ||||| |||| | ||||||||| |||||||||    
T  22102042 tatttataagaaatatttgacttttttgatttattgtataaataatgta-tttgatctatattttagacaagatac 22101968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 36286070 - 36286121
Alignment:
Q  51 ttctatttataagacatatttgacttttttgattcattgcataaatgatgta 102  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  36286070 ttctatttataagaaatacttgatttttttgattcattgcataaatgatgta 36286121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 13654641 - 13654548
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||| ||||||||||||||  ||||||||| |||||||| ||||| |||||||||||||||  ||| ||| | |||||||||||| | ||||||    
T  13654641 tcactattataagcaaaaattcactttttaaattcattcaataaatgatgtatttagtctat-atatggaccacatacatcatttattgaatgaa 13654548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 18473624 - 18473558
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| || ||| |||||||||||| | |||||||||||||||||||||| |||||||||| ||||    
T  18473624 tactccctttggtcctatttataagaaacatttgacttttttgattcattgtataaatgatgcattt 18473558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 10437770 - 10437709
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||||||||| |||||  |||||| |||||||||||||| ||||||||    
T  10437770 tcactattataagcaaaaatcaacattttagattcatttattaaattatgtatgtagtctat 10437709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 18391526 - 18391586
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||||||||||||||||||||| ||||| |||| | |||||| ||||||||||||    
T  18391526 atttgacttttttgattcattgcataaataatgta-tttgatctatattataaacaagatac 18391586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 31786008 - 31785923
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcattta 224  Q
    |||||||||||||||||||||||| |||||| |||||| | |||||||||||| |  ||||| |||| |||   ||||||||||||    
T  31786008 tcactgttataagcaaaaatcaaccttttaaattcatttaataaattatgtatgtgatctatattatagaccgcatacatcattta 31785923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 919639 - 919707
Alignment:
Q  37 attactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||| ||||  ||| |||| || |||||||||||||||||||||||  |||||||||||||||    
T  919639 attactccatccggtcatatatataggaaatatttgacttttttgattcattcaataaatgatgtattt 919707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 4349123 - 4349210
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||||||||||||||||||||||| |||||| | |||||| | ||||| ||| ||  ||| ||| |||||||||||||| ||||||||    
T  4349123 ttataagcaaaaatcaactttttaa-ttcatttaataaattgtttattttgtcaataatatagaccaaatacatcatttattaaatgaa 4349210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 8717846 - 8717786
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtattt 193  Q
    |||| |||||| ||||||||||||||||| |||||| ||||||||| ||||| ||||||||    
T  8717846 ctccgatcactattataagcaaaaatcaaatttttaggttcattcaataaataatgtattt 8717786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 17625774 - 17625678
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||| |||||||||||||||||| |||||  | |||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  17625774 atcactattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 17625678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 13664960 - 13665011
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| | ||||||||||||| ||| ||||||||||||||||||||    
T  13664960 tatttataagaaacatttgacttttttaattaattgcataaatgatgtattt 13665011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 32911556 - 32911509
Alignment:
Q  186 atgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  32911556 atgtatttagtctatattatagactaaatacatcatttaataaatgaa 32911509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 13356264 - 13356218
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  13356264 ttataagcaaaaatctactttttaagttcattcaataaatgatgtat 13356218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 14772555 - 14772605
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgt 189  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||| ||||    
T  14772555 tcactattataagcaaaaatcaacattttaggttcattcattaaatgatgt 14772605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 10228201 - 10228152
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtat 103  Q
    ||||||| ||| | |||||||||||||||||||||| |||||||||||||    
T  10228201 tatttattagaaacatttgacttttttgattcattgtataaatgatgtat 10228152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 36434706 - 36434766
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||| |||||| ||||||| |||||||||| ||||| ||||||||||||| |||||||||    
T  36434706 atttgattttttttattcattacataaatgatatattt-ggtttatattttagacaagatac 36434766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 25792979 - 25792927
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||  |||||||| ||||||||||||||| ||||||    
T  25792979 tcactattataagcaaaaatttactttttaggttcattcattaaatgatgtat 25792927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 3100410 - 3100473
Alignment:
Q  137 aatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||||| |||||||||||||| ||| |||||  |||||||| ||||| |||||| ||||||||    
T  3100410 aatcactattataagcaaaaattaacattttagattcattcaataaatgatgtatgtagtctat 3100473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 16619152 - 16619101
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| ||| ||||| ||||||||| |||||||||||||| |||||    
T  16619152 tatttataagaaatagttgacgtttttgatttattgcataaatgatatattt 16619101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 29299507 - 29299417
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttg-attcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||| | |||| ||| |||||||| | |||||||||||||| |||||||| |||||||||||| || ||| ||||||||| |||| ||||    
T  29299507 tactccctccggtcctagttataagaaacatttgacttttttgaattcattgtataaatgatgta-ttcggtctatattttagacaaaatac 29299417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 13391538 - 13391632
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||| ||||||| |||| |||||||||||  |||||||| ||||| |||||||| ||| ||  ||| ||| |||||||| ||||| | ||||||    
T  13391538 tcactattataagtaaaagtcaactttttagattcattcaataaatgatgtatttggtcaataatatagactaaatacataatttattgaatgaa 13391632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 14221864 - 14221910
Alignment:
Q  59 ataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | ||||||||||||||||| |||||||||||||| |||||    
T  14221864 ataagaaacatttgacttttttgattaattgcataaatgatatattt 14221910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 4349212 - 4349147
Alignment:
Q  169 agttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||| | ||||| |||||||| |||||| |||||||||||||| |  ||||| |||||||||    
T  4349212 agttcatttaataaatgatgtatttggtctatattattgacaaaataaacaatttattaaatgaat 4349147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 11932110 - 11932030
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||| ||||||| |||| | |||| | |||||||||| |||  |||||||||||| |||||| ||||||||| |||||||||    
T  11932110 cggtcctatttaaaagaaacatttaatttttttgatttattatataaatgatgta-tttggtctatattttagacaagatac 11932030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 12922483 - 12922410
Alignment:
Q  161 actttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||| |||||||| ||||| || ||||| |||||| ||||| |  |||||||||||||| | |||||||    
T  12922483 actttttaaattcattcaataaatgatatatttggtctatattattaaacaaatacatcatttattgaatgaat 12922410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 18652903 - 18652846
Alignment:
Q  134 tccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    |||| ||||| |||||| ||||||||||| |||||  |||||||||||||| ||||||    
T  18652903 tccagtcactattataaacaaaaatcaacattttagattcattcattaaatgatgtat 18652846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 33075198 - 33075137
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||||| ||  ||||| ||||||||||||||| |||||| | ||||||    
T  33075198 tcactattataagcaaaaattaatattttaggttcattcattaaatgatgtatgtggtctat 33075137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 33821062 - 33821143
Alignment:
Q  152 caaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||||  |||||| ||||||| | ||| |||||||||||||||||  ||| |||| || |||||||||| | ||||||    
T  33821062 caaaaatcatttttttaggttcattgaataacttatgtatttagtctataatatagacacaaaacatcatttattcaatgaa 33821143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 1100155 - 1100095
Alignment:
Q  174 attcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||||| |||||| |||||| | |||| ||| | |||||||||||||| |||||||    
T  1100155 attcattaaatgatgtatgtagtctttattatagaccacatacatcatttaatgaatgaat 1100095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 7613497 - 7613437
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtattt 193  Q
    ||||| ||||||||||||| |||| |||||||||||  |||||| | ||||| ||||||||    
T  7613497 ctccagtcactgttataagtaaaagtcaactttttagattcatttaataaatgatgtattt 7613437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 8717731 - 8717779
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtattt 193  Q
    |||||||||||||||||||||||| ||| ||| | ||||| ||||||||    
T  8717731 ttataagcaaaaatcaactttttaggtttatttaataaataatgtattt 8717779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 11795750 - 11795838
Alignment:
Q  146 tataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||||||||||| |||||  |||||||| | ||| |||||| | |||| | |||| ||| | ||| |||||||||| |||||||    
T  11795750 tataagcaaaaatcaacattttagattcattcaattaatgatgtatatggtctttattatagaccacatatatcatttaatgaatgaat 11795838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 234
Target Start/End: Complemental strand, 14274259 - 14274172
Alignment:
Q  146 tataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||||| ||| ||||||| ||||||||||| ||| |||||| |||| |||  ||| ||| | |||||||||| ||| |||||||    
T  14274259 tataagcaaaattca-ctttttaggttcattcatttaatgatgtatgtagtttataatatggaccacatacatcattaaatgaatgaat 14274172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 50308777 - 50308674
Alignment:
Q  123 aagataccctctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatt 222  Q
    ||||||| |||||| |||||| ||||||||||||| |||| ||||||||||||||||||||| |||||||| ||||||||||||||| |||||||| |||    
T  50308777 aagatactctctccgatcactattataagcaaaaaccaacattttaagttcattcattaaatgatgtatttggtctatgttattgaccaaatacataatt 50308678  T
Q  223 taat 226  Q
    ||||    
T  50308677 taat 50308674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 15290603 - 15290680
Alignment:
Q  157 atcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||| || ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  15290603 atcaactttgtaggttcattcattaaatgatgtatttagtctatattattgaccaaatacatcatttattaaatgaat 15290680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 28038954 - 28038865
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||||||||||||||||||  |||||| ||||||| ||||||||||| ||| |||||||| ||||||| |||||||| |||||||    
T  28038954 ttataagcaaaaatcaactttttagattcatttattaaatgatgtatttagtttatattattgaccaaatacaacatttaatgaatgaat 28038865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 29043467 - 29043555
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||||||||||||||||||| ||||||||| ||||| | ||||||||||||| || ||||| |||||||||||||| | ||||||    
T  29043467 ttataagcaaaaatcaactttttaggttcattcaataaatgacgtatttagtctatatttttgaccaaatacatcatttattgaatgaa 29043555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 15343072 - 15342997
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| |||||| || |||||||||    
T  15343072 ctatttataagaaatatttgatttttttgattcattgcataaatgatgta-tttggtctatattctagacaagatac 15342997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 38737944 - 38738019
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||| || |||||||||    
T  38737944 ctatttataagaaacatttgacttttttgattcattgcataaaggatgta-tttggtttatattctagacaagatac 38738019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 38040275 - 38040341
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| |||||| |||||||||||| | |||||||||||||||||||||||||||||||| |||||    
T  38040275 tactcccttcggtcctatttataagaaacatttgacttttttgattcattgcataaatgatatattt 38040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 50308635 - 50308729
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||| ||||||||||||||||||||||||  || |||||||||||||||||||| ||| ||   || ||| |||||||||||||||| ||||||    
T  50308635 tcactattataagcaaaaatcaactttttagatttattcattaaattatgtatttggtcaataacatagaccaaatacatcatttaatgaatgaa 50308729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 39748633 - 39748686
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttg 107  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  39748633 tatttataagaaatatttgacttttttaattcattgcataaatgatgtattttg 39748686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 11386303 - 11386238
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| |||||| |||||||||||| | |||||||||||| |||||||||||||||||||||||||    
T  11386303 tactcctttcggtcctatttataagaaacatttgacttttt-gattcattgcataaatgatgtattt 11386238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 26924362 - 26924296
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | |||| |||||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  26924362 tactccctccggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtattt 26924296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 27819310 - 27819400
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||| ||||  ||||||||| | ||||||||||||||||||||||| |||||||||| |  |||| ||||||||||| |||| ||||    
T  27819310 tactccatccggtcttatttataaaaaatatttgacttttttgattcatttcataaatgatattatttgatttatattttagacaaaatac 27819400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 28038840 - 28038929
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||| |||||||||  ||||||||||||||  ||||||| ||| ||  |||  || ||||||||||||||||||||||||    
T  28038840 ttataagcaaaaattaactttttagattcattcattaaatgttgtatttggtcaataatataaactaaatacatcatttaataaatgaat 28038929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 26760186 - 26760238
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  26760186 ctatttataagaaacatttgacttttttgattcattgaataaatgatgtattt 26760238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 34332611 - 34332559
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  34332611 ctatttataagaaacatttgacttttttgattcattggataaatgatgtattt 34332559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 8971363 - 8971320
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaat 96  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  8971363 ctatttataagaaatatttgacttttttgattcattgcataaat 8971320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 9675973 - 9676068
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| ||||||| |||||| ||||||||| ||||||| | ||||| |||||||||||| ||  ||| ||| ||||||||||||||  ||||||||    
T  9675973 tcactattataagtaaaaattaactttttaggttcatttaataaataatgtatttagtcaattatatagactaaatacatcatttatcaaatgaat 9676068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 26158716 - 26158775
Alignment:
Q  140 cactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtcta 199  Q
    |||| |||||||||||||| |||||||||||||||||||  |||| ||||||||||||||    
T  26158716 cactattataagcaaaaattaactttttaagttcattcaacaaatgatgtatttagtcta 26158775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 26172014 - 26172073
Alignment:
Q  140 cactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtcta 199  Q
    |||| |||||||||||||| |||||||||||||||||||  |||| ||||||||||||||    
T  26172014 cactattataagcaaaaattaactttttaagttcattcaacaaatgatgtatttagtcta 26172073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 46906994 - 46906899
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||||||||||||| |||||  | |||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  46906994 tcactgttataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 46906899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 6661634 - 6661574
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||||||||    
T  6661634 atttgacttttttgattaattgcataaatgatgta-tttggtctatattctatacaagatac 6661574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 14967363 - 14967306
Alignment:
Q  134 tccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    |||||||||| |||||||||||||||||| |||||  |||||||||||||| ||||||    
T  14967363 tccaatcactattataagcaaaaatcaacattttagattcattcattaaatgatgtat 14967306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 44939074 - 44939131
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||| |||||||||||| | ||||||||||||| |||||||| |||||||||||||||    
T  44939074 cggtcctatttataagaaacatttgactttttttattcattgtataaatgatgtattt 44939131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 47912825 - 47912882
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||| |||||||||||| ||||||||||||||||||| |||| |||||| ||||||||    
T  47912825 cggtcctatttataagaaatatttgacttttttgatttattgtataaataatgtattt 47912882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 49944973 - 49944893
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||| ||||||| |||| | |||||| ||||||||||||||| |||||||||||| |||||| |||||| || |||||||||    
T  49944973 cggtcctatttacaagaaacatttgatttttttgattcattgtataaatgatgta-tttggtctatattctagacaagatac 49944893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 519830 - 519898
Alignment:
Q  37 attactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||| | |||| |||||||||| | | ||||||||||||||||| |||| |||||||||||||||    
T  519830 attactccctccggtcctatttataataaacatttgacttttttgatttattgtataaatgatgtattt 519898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 37179041 - 37178970
Alignment:
Q  57 ttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||| | ||||||||||||||||| |||| |||||||||||| ||| || ||||||||| |||||||||    
T  37179041 ttataagaaacatttgacttttttgatttattgtataaatgatgta-tttagtctatattttagacaagatac 37178970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 52427376 - 52427412
Alignment:
Q  69 tttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||||||||||||||||||||||||||||    
T  52427376 tttgacttttttgattcattgcataaatgatgtattt 52427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 26070958 - 26070907
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| | |||| |||||||||||||||||||||||| ||||||||    
T  26070958 tatttataagaaacattttacttttttgattcattgcataaataatgtattt 26070907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 34953897 - 34953964
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| ||||| |||||||||||||||||  |||||| |||||||||||||| |||||| | ||||||    
T  34953897 ctccagtcactattataagcaaaaatcaatattttaaattcattcattaaatgatgtatgtggtctat 34953964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 6793743 - 6793677
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||| || |||| ||||||| |||| | |||| |||||| ||||||||||||||||||||||||||    
T  6793743 tactctatccggtcctatttaaaagaaacatttaacttttatgattcattgcataaatgatgtattt 6793677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 9676099 - 9676005
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||| ||||||| ||||||||| || |||  ||||||   ||||| ||||||||||||||| | |||||| |||||||| ||||| ||||||||    
T  9676099 tcactattataagtaaaaatcaatttcttagattcatttgataaatgatgtatttagtctatataattgactaaatacattatttattaaatgaa 9676005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 2351146 - 2351195
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgta 102  Q
    |||||||||||| | |||| ||||||||||||||||||||||||| ||||    
T  2351146 ctatttataagaaacatttaacttttttgattcattgcataaatgttgta 2351195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 5891725 - 5891801
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatatt 116  Q
    |||||| | |||| |||||||||||| |||||| |||||||| ||| |||||||| || ||||| |||||||||||||    
T  5891725 tactccctccggtcctatttataagaaatatttaacttttttaattaattgcatatataatgta-tttggtttatatt 5891801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 18744704 - 18744639
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtatt 104  Q
    |||||| | |||| ||||||| |||| | |||| |||||||| |||||||||||||||||||||||    
T  18744704 tactccctccggtcctatttaaaagaaacatttaactttttttattcattgcataaatgatgtatt 18744639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 24305673 - 24305753
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||| ||||||| | |||||||| |||||| |||||| |||||||||||||| |  |||||||||| || |||||||||    
T  24305673 cggttctgtttataaaaaatatttgattttttttattcatcgcataaatgatgta-taaggtttatattctatacaagatac 24305753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 38590074 - 38590131
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||| |||||||   ||||||||||||||||||||| ||||||| ||||||||    
T  38590074 cggttctatatataagaagcatttgacttttttgattcatttcataaataatgtattt 38590131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 41007804 - 41007723
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaat 226  Q
    |||||||||||| ||||| |||||  |||||||||||||| |||||| | |||| | |||| ||| | ||||||||||||||    
T  41007804 ttataagcaaaattcaacattttagattcattcattaaatgatgtatgtggtctttattatagaccacatacatcatttaat 41007723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 6156640 - 6156700
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtct 198  Q
    |||||| |||||| |||||||||||||||||  |||||||| ||||| |||||||| ||||    
T  6156640 atcactattataaacaaaaatcaactttttagattcattcaataaatgatgtatttggtct 6156700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 24981974 - 24981922
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||| ||||||    
T  24981974 tcactattataagcaaaaatcaacattttagattcattcattaaatgatgtat 24981922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 41007691 - 41007779
Alignment:
Q  146 tataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||||||||||  |||||| || ||||||||||| |||||| | ||||||  ||  ||| | |||||||||||||| |||||||    
T  41007691 tataagcaaaaatcaatattttaaatttattcattaaatgatgtatgtggtctataataaagaccacatacatcatttaatgaatgaat 41007779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 52923456 - 52923404
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||| |||||||| ||||||||| ||||| ||||||    
T  52923456 tcactattataagcaaaaatctactttttaggttcattcaataaatgatgtat 52923404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 3549906 - 3549851
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||||||||||||| ||| |||||| |||||||||||||| |||||| | ||||||    
T  3549906 ttataagcaaaaattaacattttaaattcattcattaaataatgtatgtggtctat 3549851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 7375195 - 7375238
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaat 96  Q
    |||||||||| | ||||||||||||||||| |||||||||||||    
T  7375195 ctatttataaaaaatatttgacttttttgaatcattgcataaat 7375238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 15286023 - 15286074
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| | ||||||||||||| |||||||  |||||||||||||||    
T  15286023 tatttataagaaacatttgacttttttaattcattatataaatgatgtattt 15286074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 24981848 - 24981943
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||| ||| |||||  | |||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  24981848 tcactattataagcaaaaattaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 24981943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 38847317 - 38847403
Alignment:
Q  146 tataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||||||||||| || |||||||||||||||||| ||| |||||| | |||||| ||||  || | |||||||||| ||| ||||||    
T  38847317 tataagcaaaaat-aattttttaagttcattcatttaatgatgtatgtggtctatattataaaccacatacatcattaaatgaatgaa 38847403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 9902574 - 9902636
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||||||||||||| |||||| ||||||||| ||| ||| ||||||| |||||| | ||||||    
T  9902574 atcactgttataagtaaaaattaactttttaggttaatttattaaatgatgtatgtggtctat 9902636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 15290711 - 15290617
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||| ||||||||||   |||||||||||  |||||| | ||||| |||||||| ||| ||  ||| ||| |||||||||||||||| ||||||    
T  15290711 tcactattataagcaagtgtcaactttttagattcatttaataaatgatgtatttggtcaataatatagactaaatacatcatttaatgaatgaa 15290617  T

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Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 19175727 - 19175669
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||| ||||||||||||||| ||||||||  |||||||| ||||| ||||||    
T  19175727 ctccagtcactattataagcaaaaatctactttttagattcattcaataaatgatgtat 19175669  T

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Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 105
Target Start/End: Original strand, 29256634 - 29256664
Alignment:
Q  75 ttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||||||||||||||||||||||    
T  29256634 ttttttgattcattgcataaatgatgtattt 29256664  T

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Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 31889199 - 31889082
Alignment:
Q  115 ttttaaacaagataccctctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaat 214  Q
    ||||||| || |||| ||||| ||||||| ||||||||||||||  ||||||||  |||||||||| ||| ||| |  | |||| | |||| ||| | ||    
T  31889199 ttttaaaaaaaatacactctctaatcact-ttataagcaaaaatttactttttacattcattcatttaatgatgcacatggtctttattatagaccacat 31889101  T
Q  215 acatcatttaataaatgaa 233  Q
    |||||||| ||||||||||    
T  31889100 acatcattaaataaatgaa 31889082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 20273253 - 20273192
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||||||||||||||||| ||||||||| | |||||| | ||||| ||||||  |||||||    
T  20273253 tcactgttataagcaaaaaacaacttttttaattcattgaataaatgatgtatccagtctat 20273192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 41649546 - 41649591
Alignment:
Q  146 tataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||||||||    
T  41649546 tataagcaaaattcacctttttatgttcattcatttaattatgtat 41649591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 48083511 - 48083572
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||||| ||  ||||| ||||||||||||||| |||||| | ||||||    
T  48083511 tcactattataagcaaaaattaatattttaggttcattcattaaatgatgtatgtggtctat 48083572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 3013743 - 3013691
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||| ||| |||||  |||||||||||||| ||||||    
T  3013743 tcactattataagcaaaaattaacattttacattcattcattaaatgatgtat 3013691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 14885327 - 14885387
Alignment:
Q  140 cactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||| ||||||  |||||||||| |||||| || |||||||||||||||||| | ||||||    
T  14885327 cactattataaaaaaaaatcaacattttaaatttattcattaaattatgtatgtggtctat 14885387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 14885485 - 14885545
Alignment:
Q  140 cactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||| ||||||  |||||||||| |||||| || |||||||||||||||||| | ||||||    
T  14885485 cactattataaaaaaaaatcaacattttaaatttattcattaaattatgtatgtggtctat 14885545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 39420325 - 39420377
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||| ||| |||||| || ||||||||||| ||||||    
T  39420325 tcactattataagcaaaaattaacattttaaattgattcattaaatgatgtat 39420377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 42761344 - 42761272
Alignment:
Q  161 actttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||||||||||||||| ||| |||||| | |||||| ||||  || | |||||||||| ||| ||||||    
T  42761344 actttttaagttcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaa 42761272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 49944832 - 49944896
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtat 103  Q
    |||| ||| |||| |||||||||||| | |||| ||||||| ||||||||| |||| ||||||||    
T  49944832 tactacatccggtcctatttataagaaaaatttaactttttagattcattgaataattgatgtat 49944896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 50155311 - 50155363
Alignment:
Q  54 tatttataagacatatttgacttttttga-ttcattgcataaatgatgtattt 105  Q
    ||||||||| | |||||||| |||||| | |||||||||||||||||||||||    
T  50155311 tatttataataaatatttgattttttttaattcattgcataaatgatgtattt 50155363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 30627965 - 30627883
Alignment:
Q  46 ttcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  30627965 ttcggttctatttataagaaacatttgacttttctgattcattgcataaatgatgta-tttggtctatattttagacaagatac 30627883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 3065032 - 3064943
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||| | |||| |||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||| ||||||||| |||||||||    
T  3065032 tactccctccggtcctatttataagaaatattttacttttttgattcattgcataaatggtgta-tttggtctatattttatacaagatac 3064943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 9077720 - 9077646
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||| |||||| || |||||||||    
T  9077720 tatttataagaaatatttgacttttttgattcattgcataaatgatgca-tttggtctatattctagacaagatac 9077646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 3203678 - 3203772
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||| ||||||||||||||||| |||||| ||||||||| | ||| ||||||  ||||||| || ||||| |||||||||||||| ||||||||    
T  3203678 tcactattataagcaaaaatcaattttttaggttcattcaatgaatgatgtatcaagtctatattcttgaccaaatacatcatttattaaatgaa 3203772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 28863469 - 28863380
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||| ||||||||||||||||| | |||| | || ||||||| ||||||||||||||||| ||||||||||||| || |||||||||    
T  28863469 tactccatccggttctatttataagaaacatttaaattctttgatttattgcataaatgatgta-tttggtttatattctagacaagatac 28863380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 12450484 - 12450434
Alignment:
Q  55 atttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  12450484 atttataagaaatatttgacttttttaattcattgcataaatgatgtattt 12450434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 17265734 - 17265786
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  17265734 ctatttataagaaacatttgacttttttgattcattgcataaatgacgtattt 17265786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 16120972 - 16121067
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| ||||||| |||| | | |||||||| |||||||| ||||| ||||| || |||||| |||||||| |||||||||||||| | |||||||    
T  16120972 tcactattataagtaaaagttatctttttaaattcattcaataaatgatgtacttggtctatattattgaccaaatacatcatttatttaatgaat 16121067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 30895318 - 30895267
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| | |||||||||||||||||||||||||||||||| |||||    
T  30895318 tatttataagaaacatttgacttttttgattcattgcataaatgatatattt 30895267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 31996645 - 31996571
Alignment:
Q  126 ataccctctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||| ||||||  ||||| |||||||||||||||||| ||||| ||||||| ||||||| |||||| ||||||||    
T  31996645 atacactctccggtcactattataagcaaaaatcaacattttaggttcatttattaaatgatgtatgtagtctat 31996571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 33119903 - 33119969
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| |||||| |||||||||||| | ||||||||| |||||||||||| ||||||| |||||||    
T  33119903 tactcccttcggtcctatttataagaaacatttgacttctttgattcattgtataaatgttgtattt 33119969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 2972296 - 2972224
Alignment:
Q  56 tttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||| | ||| ||| ||||||||||||||||||||||||||||||| || ||||||||| | |||||||    
T  2972296 tttataagaaacattagacgtttttgattcattgcataaatgatgtatttt-gtctatattttagataagatac 2972224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 6797501 - 6797416
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcattta 224  Q
    ||||| |||||| || ||||||| |||||| |||||||||||||||  |||||||||| ||| |||||||  |||||||| |||||    
T  6797501 tcactattataaacacaaatcaattttttaggttcattcattaaatgttgtatttagtttatattattgagcaaatacattattta 6797416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 16121104 - 16121003
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatga 232  Q
    |||| |||||| ||||||||||||||||||||||||  |||||| | ||||| |||||||| ||| ||  ||| ||| || ||||||||||| | |||||    
T  16121104 ctccgatcactattataagcaaaaatcaactttttagattcattaaataaatgatgtatttggtcaataatatagaccaagtacatcatttattgaatga 16121005  T
Q  233 at 234  Q
    ||    
T  16121004 at 16121003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 26527191 - 26527292
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatga 232  Q
    |||| |||||| |||||||||||||||||| |||||  | ||||||| |||| |||||| |||||| | ||||  || | |||||||||||||| |||||    
T  26527191 ctccgatcactattataagcaaaaatcaacattttagatacattcataaaataatgtatgtagtctttattataaaccacatacatcatttaatgaatga 26527290  T
Q  233 at 234  Q
    ||    
T  26527291 at 26527292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 3203810 - 3203750
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtattt 193  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||| | ||||| ||||||||    
T  3203810 ctccagtcactattataagcaaaaatcaactttttaggttcatttaataaatgatgtattt 3203750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 10283299 - 10283359
Alignment:
Q  45 attcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||| || ||||||||| | |||||||||||||||||||||| | |||||||||||||||    
T  10283299 attcgattatatttataaaaaatatttgacttttttgattcatggtataaatgatgtattt 10283359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 28630888 - 28630813
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||| | | |||||||||| |||||||||||||||| ||||| |||||| |||||| || |||||||||    
T  28630888 ctatttataagaaacaattgactttttagattcattgcataaattatgta-tttggtctatattatagacaagatac 28630813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 2937093 - 2937166
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagata 128  Q
    |||||||||||| | |||| ||||||| ||||||||||||||||| |||| ||||||||| |||||| ||||||||    
T  2937093 ctatttataagaaacatttaactttttagattcattgcataaatg-tgta-tttggtttacattttagacaagata 2937166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 14173397 - 14173492
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| ||||||||||||||| | ||||||  |||||||| ||||| | |||| ||||||||  ||||||| | |||||||||||| | |||||||    
T  14173397 tcactattataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaat 14173492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 14177933 - 14178028
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| ||||||||||||||| | ||||||  |||||||| ||||| | |||| ||||||||  ||||||| | |||||||||||| | |||||||    
T  14177933 tcactattataagcaaaaatctaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaat 14178028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 34379868 - 34379773
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||| |||||| | ||| ||  ||  ||| | |||||||||||||| |||||||    
T  34379868 tcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaat 34379773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 33689236 - 33689330
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||| |||||||||||||||||  |||||  |||||||| | ||| |||||| |||| | | |||| ||| | |||||||||||||||||||||    
T  33689236 tcactattataagcaaaaatcaatattttatattcattcaattaataatgtatatagtatttattatagactacatacatcatttaataaatgaa 33689330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 15517217 - 15517128
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||||||  |||||  |||||||||||||| |||||| | ||||||  ||  ||| | |||||||||||||| |||||||    
T  15517217 ttataagcaaaaatcaatattttagattcattcattaaatgatgtatgtggtctataataaagacgatatacatcatttaatgaatgaat 15517128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 12104752 - 12104804
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||||||| |||||| |||||| ||||||| ||||||    
T  12104752 tcactattataagcaaaaatcaacattttaaattcatttattaaatgatgtat 12104804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 16199127 - 16199179
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||| || ||||| ||||||||||||||| ||||||    
T  16199127 tcactattataagcaaaaatctacattttaggttcattcattaaatgatgtat 16199179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 8052990 - 8052939
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| ||||||||||||||| |||||||| | |||| ||||||||    
T  8052990 tatttataagaaatatttgacttttttaattcattgtacaaataatgtattt 8052939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 12999769 - 12999820
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| |||| | |||| ||||||||||||||||||||||| |||||||||    
T  12999769 tatttacaagaaacatttaacttttttgattcattgcataaaagatgtattt 12999820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 21162412 - 21162463
Alignment:
Q  52 tctatttataagacatatttgacttttttgattcattgcataaatgatgtat 103  Q
    ||||||||||||| | |||| |||||||| ||||||||||||||| ||||||    
T  21162412 tctatttataagaaacatttaacttttttaattcattgcataaataatgtat 21162463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 5051568 - 5051606
Alignment:
Q  2 tagaaatattctcttaaagtttgtgcatttaattaatta 40  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  5051568 tagaaatattctcttaaattttgtgcacttaattaatta 5051606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 13463059 - 13463013
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||||||||||||  |||||||| ||||||||||||||| ||||||    
T  13463059 ttataagcaaaaattgactttttaggttcattcattaaatgatgtat 13463013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 25538097 - 25538047
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattg 89  Q
    |||||||| ||||  ||||||||||| |||||| |||||||||||||||||    
T  25538097 tactccatccggtcttatttataagaaatatttaacttttttgattcattg 25538047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 29419926 - 29419868
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||||||| | ||||||| |||||||||| |||||  |||||||||||||| ||||||    
T  29419926 ctccaatcattattataagtaaaaatcaacattttagattcattcattaaatgatgtat 29419868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 34170079 - 34170137
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||| |||||| ||||||||||| |||||  |||||||||||||| ||||||    
T  34170079 ctccattcactattataaacaaaaatcaacattttagattcattcattaaatgatgtat 34170137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 10258305 - 10258362
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgta 190  Q
    ||||| |||||||||||| ||||||||||| |||||  |||||| ||||||| |||||    
T  10258305 ctccagtcactgttataaacaaaaatcaacattttagattcatttattaaatgatgta 10258362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 26527323 - 26527271
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||| ||| |||||  |||||||||||||| ||||||    
T  26527323 tcactattataagcaaaaattaacattttagattcattcattaaatgatgtat 26527271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 27909110 - 27909058
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||| |||| | ||||||||||||| |||||||| |||| ||||||||||    
T  27909110 ctatttacaagaaacatttgacttttttaattcattgaataattgatgtattt 27909058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 31714542 - 31714586
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaa 183  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||    
T  31714542 tcactattataagcaaaaatcaacattttagtttcattcattaaa 31714586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 31996512 - 31996600
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||||||||||||| ||| |  |||||||| | ||| |||||| | || | | |||| ||| | |||||||||||||||||||||    
T  31996512 ttataagcaaaaatcaacatttcagattcattcaattaataatgtatatggtatttattatagactacatacatcatttaataaatgaa 31996600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 32254960 - 32254868
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaa 225  Q
    |||| |||||| |||||||||||| | ||  |||||  |||||||||||||| |||||| | |||| | |||| ||| | |||||||||||||    
T  32254960 ctccgatcactattataagcaaaagttaatattttagattcattcattaaatgatgtatgtggtctttattatagactacatacatcatttaa 32254868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 9197090 - 9197164
Alignment:
Q  49 ggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaa 124  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||    
T  9197090 ggttctatttataagaaatatttgacttttttgattcattgcataaatgatgtatttt-gtctatattctaaacaa 9197164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 36985289 - 36985216
Alignment:
Q  55 atttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||| || |||||||||||||||||||||||||||| ||||| ||| || |||||| ||||||||||||    
T  36985289 atttataagaaatttttgacttttttgattcattgcataaataatgta-tttagtctatattctaaacaagatac 36985216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 37010728 - 37010655
Alignment:
Q  55 atttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||| || |||||||||||||||||||||||||||| ||||| ||| || |||||| ||||||||||||    
T  37010728 atttataagaaatttttgacttttttgattcattgcataaataatgta-tttagtctatattctaaacaagatac 37010655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 51517106 - 51517040
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | |||| |||||||||||| | |||||||||||||| |||||||||||||||||||||||    
T  51517106 tactccctccggtcctatttataagaaacatttgacttttttggttcattgcataaatgatgtattt 51517040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 53441906 - 53441972
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | |||| |||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  53441906 tactccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtattt 53441972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 13622495 - 13622575
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||| |||||||||||| | |||||||||||||  ||||||||||||||||| || |||||| ||||||||| |||||||||    
T  13622495 cggtcctatttataagaaacatttgacttttttagttcattgcataaatgatata-tttggtctatattttacacaagatac 13622575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 37897815 - 37897754
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||||| | ||||||    
T  37897815 tcactattataagcaaaaatcaacattttaaattcattcattaaattatgtatgtggtctat 37897754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 43449107 - 43449019
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagata 128  Q
    |||||| |||| | |||||||||||| |||||||| ||||||| ||||||| |||||||||||| ||||||||||||  || ||||||||    
T  43449107 tactcccttcgatcctatttataagaaatatttgatttttttggttcattgtataaatgatgta-tttggtttatatcatagacaagata 43449019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 21663037 - 21662969
Alignment:
Q  37 attactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||| | ||||  ||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  21663037 attactccctccggtcttatttataagaaacatttaacttttttgattcattgcataaatgatgtattt 21662969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 29241607 - 29241519
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||| |||||||||||||||  |||||||| ||||| |||||||| |||||| ||| |||  |||| ||||||||| ||||||||    
T  29241607 ttataagccaaaatcaactttttagattcattcaataaatgatgtatttggtctatattactgatcaaatgcatcatttattaaatgaa 29241519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 44518171 - 44518096
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||| |  |||||||||||||||||||||  ||||||||||| |||||| ||||||||| |||||||||    
T  44518171 ctatttataagaaaactttgacttttttgattcattgtctaaatgatgta-tttggtctatattttagacaagatac 44518096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 45010763 - 45010838
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||||||| || |||| |||||| ||||| ||||||    
T  45010763 ctatttataagaaatatttgacttttttgatttattgtataaatgatgt-ttgtggtctatattctaaactagatac 45010838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 54537593 - 54537526
Alignment:
Q  38 ttactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||| |||||| |||||||||||| ||  |||||||||||||||||||||||||||  |||||||    
T  54537593 ttactcccttcggtcctatttataagaaattattgacttttttgattcattgcataaattgtgtattt 54537526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 39579627 - 39579565
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||||| ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||    
T  39579627 atcactattataagcaaaaatcaactttttagattcattcgttaagtgatgtatttagtctat 39579565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 19649583 - 19649644
Alignment:
Q  44 cattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||| |||||| |||| | |||||||||||||||||||||| |||| ||||||||||    
T  19649583 cattcggttttatttacaagaaacatttgacttttttgattcattgaataattgatgtattt 19649644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 40169127 - 40169054
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacat 218  Q
    |||||||||||||| || |||||||||||||||| | ||| ||||||||||||| | ||||| || ||||||||    
T  40169127 ttataagcaaaaattaattttttaagttcattcaattaataatgtatttagtctgtattattaactaaatacat 40169054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 43343581 - 43343532
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgta 102  Q
    |||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  43343581 ctatttataagaaacatttgacttttttgattcattgtataaatgatgta 43343532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 52865086 - 52865034
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||| | ||| |||||||||||||||||||||||||||||| |||||    
T  52865086 ctatttataaaaaataattgacttttttgattcattgcataaatgatatattt 52865034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 331931 - 331844
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaat 226  Q
    ||||| |||||||||||||| ||| |||||  |||||||||||||| |||||| || ||| | |||| ||| | ||||||||||||||    
T  331931 tcactattataagcaaaaattaacattttagattcattcattaaatgatgtatataatctttattatagaccacatacatcatttaat 331844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 23222972 - 23223046
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||| | ||||||||||||| ||| |||  |||||||||||| |||||| ||||||||| |||||||||    
T  23222972 tatttataagaaacatttgacttttttaatttattatataaatgatgta-tttggtctatattttagacaagatac 23223046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 44382945 - 44382850
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||  | |||||||||||| || ||| |||||| | ||||  || | |||||||||||||| |||||||    
T  44382945 tcactattataagcaaaaatcaacgttttagatacattcattaaatgatatatgtagtctgtattataaaccacatacatcatttaatgaatgaat 44382850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 50354376 - 50354325
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgat 99  Q
    |||| |||||||||| | |||||||| |||||||||||||||||||||||||    
T  50354376 cggtcctatttataaaaaatatttgatttttttgattcattgcataaatgat 50354325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 54595797 - 54595892
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||| |||||| | ||| ||  ||  ||| | |||||||||||||| |||||||    
T  54595797 tcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaat 54595892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 8266380 - 8266318
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgt 101  Q
    |||||| | |||| |||||||||||| | |||||||||||||||||||||| |||||| ||||    
T  8266380 tactccctccggtcctatttataagaaacatttgacttttttgattcattgtataaataatgt 8266318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 10872673 - 10872731
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||| |||||||||||||||||  |||||| |||||||||||||| ||||||    
T  10872673 ctccagtcactattataagcaaaaatcaatattttaaattcattcattaaatgatgtat 10872731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 12064908 - 12064974
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | |||| ||| |||||||| | |||| |||||||||||||||||||| ||||||||||||    
T  12064908 tactccctccggtcctacttataagaaacattttacttttttgattcattgcattaatgatgtattt 12064974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 35099069 - 35099142
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagata 128  Q
    ||||||||||| |||||| |||||||| ||| |||| |||||||||||| |||||| |||||| || ||||||||    
T  35099069 tatttataagaaatatttaacttttttaatttattgtataaatgatgta-tttggtctatattctagacaagata 35099142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 40639929 - 40639867
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||||| |||||||||||||||||| |||||| || ||||||||||| |||||| | ||||||    
T  40639929 atcactattataagcaaaaatcaacattttaaatttattcattaaatgatgtatgtggtctat 40639867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 7824006 - 7823905
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatga 232  Q
    |||| |||||| |||||||| ||||| ||| |||||  ||||| |||||||| |||||| | |||  | |||| ||  ||||||||||||||||||||||    
T  7824006 ctccgatcactattataagctaaaattaacattttagattcatccattaaatgatgtatatggtcattattatagatcaaatacatcatttaataaatga 7823907  T
Q  233 at 234  Q
    ||    
T  7823906 at 7823905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 40639842 - 40639781
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||||| ||| |||||| |||||||||||||| |||||| | ||||||    
T  40639842 tcactattataagcaaaaattaacattttaaattcattcattaaatgatgtatgtggtctat 40639781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 50603646 - 50603594
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||| | |||||||||||||||| ||||| ||||||    
T  50603646 tcactattataagcaaaaatctattttttaagttcattcaataaatgatgtat 50603594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 9236209 - 9236170
Alignment:
Q  66 atatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  9236209 atatttgacttttttgattcattacataaatgatatattt 9236170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 20028485 - 20028535
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||| | ||||||||||||||| ||||||| ||||||||||||||||    
T  20028485 tatttataaaaaatatttgactttttt-attcatttcataaatgatgtattt 20028535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 21217299 - 21217204
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||  |  ||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  21217299 tcactattataagcaaaaatcaacgttttagatatattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 21217204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 198
Target Start/End: Original strand, 26143502 - 26143537
Alignment:
Q  163 tttttaagttcattcattaaattatgtatttagtct 198  Q
    ||||||||||||||||||||||||||||| ||||||    
T  26143502 tttttaagttcattcattaaattatgtatgtagtct 26143537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 51723527 - 51723461
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | |||||||||| ||| || | |||| ||||||||||||||||| ||||||||| |||||    
T  51723527 tactccctccggttctattaataggaaaaatttaacttttttgattcattgtataaatgatatattt 51723461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 54273540 - 54273438
Alignment:
Q  131 ctctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaat 230  Q
    |||||| |||||| ||||||| |||||||||| ||||| ||||||  | ||||| | |||||||||  || ||||  || |||||||||||||| | |||    
T  54273540 ctctccgatcactattataagtaaaaatcaacattttaggttcatcaaataaatgacgtatttagttaatattatataccaaatacatcatttattcaat 54273441  T
Q  231 gaa 233  Q
    |||    
T  54273440 gaa 54273438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 226
Target Start/End: Complemental strand, 23444400 - 23444319
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaat 226  Q
    ||||| |||||||| ||| |||||  |||||||||||||| |||||| |||||| | ||||| || | |||||| |||||||    
T  23444400 ttataggcaaaaattaacattttagattcattcattaaatgatgtatatagtctttattattaaccacatacataatttaat 23444319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 52216013 - 52215952
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||||||||| |||||  |||| ||||||||| |||||| | ||||||    
T  52216013 tcactattataagcaaaaatcaacattttagattcactcattaaatgatgtatgtggtctat 52215952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 20625246 - 20625298
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||| ||||||||||| |||||| |||||| ||||||| ||||||    
T  20625246 tcactattataaacaaaaatcaacattttaaattcatttattaaatgatgtat 20625298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 21217173 - 21217225
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||| || |||||  |||||||||||||| ||||||    
T  21217173 tcactattataagcaaaaatctacattttagattcattcattaaatgatgtat 21217225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 22496952 - 22497020
Alignment:
Q  133 ctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatg 201  Q
    ||||| ||||| |||||||||||||| ||  |||||  |||||||||||||| |||||| | |||||||    
T  22496952 ctccagtcactattataagcaaaaattaatattttagattcattcattaaatgatgtatgtggtctatg 22497020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 25823711 - 25823667
Alignment:
Q  161 actttttaagttcattcattaaattatgtatttagtctatgttat 205  Q
    |||||||||||||||||||| ||| |||||| |||||||| ||||    
T  25823711 actttttaagttcattcatttaataatgtatgtagtctatattat 25823667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 30519731 - 30519679
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||| |||| |||||  |||||||||||||| ||||||    
T  30519731 tcactattataagcaaaaaccaacattttagattcattcattaaatgatgtat 30519679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 36571507 - 36571455
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||| |||| |  |||||||||||||||||||||||| ||||||    
T  36571507 tcactattataagtaaaagttgactttttaagttcattcattaaatgatgtat 36571455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 40470432 - 40470520
Alignment:
Q  146 tataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||  | ||||||  |||||||||||||| | |||| |||||| | |||| ||| | |||| ||||||||| |||||||    
T  40470432 tataagcaaaaatttaatttttagattcattcattaaatgacgtatgtagtctttattatagactacatacgtcatttaatgaatgaat 40470520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 41253938 - 41253990
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||| ||||||||||| |||||  |||||||||||||| ||||||    
T  41253938 tcactattataatcaaaaatcaacattttatattcattcattaaatgatgtat 41253990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 36981 - 36892
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||| ||||||||||| |||||  |||||||||||||| ||||||||  |||||||||||||| |||||||||||||||| |||||||    
T  36981 ttataaacaaaaatcaacattttagattcattcattaaatgatgtatttgatctatgttattgaccaaatacatcatttaatgaatgaat 36892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 36875 - 36956
Alignment:
Q  153 aaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||||||||||  |||||||||||||| |||||||| ||| ||   || ||  |||||||||||||||| |||||||    
T  36875 aaaaatcaactttttagattcattcattaaatgatgtatttggtcaataacatagatcaaatacatcatttaatgaatgaat 36956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 28752092 - 28752181
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||| | |||||||||| |||||||||||||| |||||||| |||||| |||||||| ||||| |||||||||| |||||||    
T  28752092 ttataagcaaaagttaactttttaatttcattcattaaatgatgtatttggtctatattattgaccaaatatatcatttaatgaatgaat 28752181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 28677316 - 28677405
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||| | |||| |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||| || |||||||||    
T  28677316 tactccctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatgta-tttggtctatattctagacaagatac 28677405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 29168488 - 29168402
Alignment:
Q  147 ataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||  || || |||||||| |||||||| ||||||||||||||    
T  29168488 ataagcaaaaatcaactttttatgttcattctttaaatgatgtatttgatccatattattgaccaaatacattatttaataaatgaa 29168402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 6838509 - 6838435
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||| || |||||||||    
T  6838509 tatttataagaaacatttgacttttttgattcattgcataaatgatgta-tttggtctatattctagacaagatac 6838435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 36245375 - 36245464
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||| | |||| || ||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||| || |||||||||    
T  36245375 tactccctccggtcctgtttataagaaacatttgacttttttgattcattgcataaatgatgta-tttggtctatattctagacaagatac 36245464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 41850745 - 41850679
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||| |||| |||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  41850745 tactccatccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtattt 41850679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 39153300 - 39153352
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  39153300 ctatttataagaaacatttgacttttttgattcattgcataaatgatgtattt 39153352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 11668014 - 11668080
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | |||| |||||||||||| | |||||||||||||||||||||||||||||||| |||||    
T  11668014 tactccctccggtcctatttataagaaacatttgacttttttgattcattgcataaatgatatattt 11668080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 13807387 - 13807321
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | ||||||||||||||||| | ||||||||||||||||||||| |||||||||| |||||    
T  13807387 tactccctccggttctatttataagaaacatttgacttttttgattcattacataaatgatatattt 13807321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 2680858 - 2680923
Alignment:
Q  40 actccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||| |||| | |||||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  2680858 actcccttcgatcctatttataagaaatatttgacttttttgattcattatataaatgatgtattt 2680923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 2399966 - 2400017
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  2399966 tatttataagaaacatttgacttttttgattcattgtataaatgatgtattt 2400017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 8566099 - 8566169
Alignment:
Q  58 tataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||| | |||| |||||||||||||||||||||||||||||| |||||| |||||| || |||||||||    
T  8566099 tataagaaacatttaacttttttgattcattgcataaatgatgta-tttggtctatattctagacaagatac 8566169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 10462514 - 10462437
Alignment:
Q  50 gttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||||||| | ||| ||| ||||| ||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  10462514 gttctatttataagaaacatt-gacattttttattcattgcataaatgatgta-tttggtatatattttagacaagatac 10462437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 29365627 - 29365686
Alignment:
Q  46 ttcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| |||||||||||| | ||||||||||||| || |||||||||||||||||||||    
T  29365627 ttcggtcctatttataagaaacatttgacttttttaatacattgcataaatgatgtattt 29365686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 2523784 - 2523833
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtat 103  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  2523784 tatttataagaaacatttgacttttttgattcattgcataaacgatgtat 2523833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 31115742 - 31115681
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||||||||| |||||  ||||||||||||||||||||| | ||||||    
T  31115742 tcactattataagcaaaaatcaacattttagcttcattcattaaattatgtatgtggtctat 31115681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 40142801 - 40142861
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||||||||||||||||||||| ||||| |||||| |||||  ||||||||||||    
T  40142801 atttgacttttttgattcattgcataaataatgta-tttggtctatatcctaaacaagatac 40142861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 28752206 - 28752118
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||||||||| || ||||||  |||||||||||||| || ||||| ||| ||  ||| ||| |||||||||||||||| ||||||    
T  28752206 ttataagcaaaaattaattttttacattcattcattaaatgatatatttggtcaataatatagaccaaatacatcatttaatgaatgaa 28752118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 29168380 - 29168456
Alignment:
Q  149 aagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaa 225  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||| ||| ||  ||| ||  |||||||||||||||    
T  29168380 aagcaaaaatcaactttttaggttcatttattaaataatgtatttggtcaataatatggatcaaatacatcatttaa 29168456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 45533364 - 45533290
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||| | ||||||||||||| |||||||| |||||| ||||| |||||| |||||| || |||||||||    
T  45533364 tatttataagaaacatttgacttttttaattcattgtataaataatgta-tttggtctatattctagacaagatac 45533290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 103
Target Start/End: Original strand, 7456436 - 7456482
Alignment:
Q  57 ttataagacatatttgacttttttgattcattgcataaatgatgtat 103  Q
    |||||||| |||||||||||||| ||||||||| |||||||||||||    
T  7456436 ttataagaaatatttgactttttagattcattgtataaatgatgtat 7456482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 7701320 - 7701226
Alignment:
Q  140 cactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||| |||||||||||||||||| |||||  | |||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  7701320 cactattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 7701226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 23818426 - 23818492
Alignment:
Q  134 tccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    |||| ||||| |||||||||||||||||| |||||  |||||||||||||| |||||| || |||||    
T  23818426 tccagtcactattataagcaaaaatcaacattttagattcattcattaaatgatgtatataatctat 23818492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 24163404 - 24163354
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtat 103  Q
    |||||||||||| | |||| |||||||| ||||||||||||||||||||||    
T  24163404 ctatttataagaaacatttcacttttttaattcattgcataaatgatgtat 24163354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 28298991 - 28298946
Alignment:
Q  51 ttctatttataagacatatttgacttttttgattcattgcataaat 96  Q
    |||||||||||| | | |||||||||||||||||||||||||||||    
T  28298991 ttctatttataaaaaacatttgacttttttgattcattgcataaat 28298946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 45441444 - 45441501
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||| ||||||||| || ||||||||||||||||||| |||| ||| |||||||||||    
T  45441444 cggtcctatttatatgaaatatttgacttttttgatttattgtatagatgatgtattt 45441501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 47987263 - 47987211
Alignment:
Q  75 ttttttgattcattgcataaatgatgtattttggtttatattttaaacaagata 128  Q
    |||||| ||||||||||||||||||||| ||||||||||| | |||||||||||    
T  47987263 ttttttaattcattgcataaatgatgta-tttggtttatactctaaacaagata 47987211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 48082938 - 48082881
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||| |||||||||| | ||||||||||||||| ||||||| |||||||| |||||||    
T  48082938 cggtcctatttataataaatatttgactttttttattcattacataaatggtgtattt 48082881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 2943219 - 2943271
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||| ||||||    
T  2943219 tcactattataagcaaaaatcaacattttagattcattcattaaatgatgtat 2943271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 25245276 - 25245224
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||| ||||||    
T  25245276 tcactattataagcaaaaatcaacattttagattcattcattaaatgatgtat 25245224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 9979815 - 9979865
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| |||||||||| |||||||| ||| ||||||||||||||||    
T  9979815 tatttataagaaatatttgactattttgatttatt-cataaatgatgtattt 9979865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 230
Target Start/End: Original strand, 10095726 - 10095817
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaat 230  Q
    ||||| |||||||||||||| ||| |||||  |||||||||||||| |||||| | ||||||| ||  ||| | |||||| ||| |||||||    
T  10095726 tcactattataagcaaaaattaacattttagattcattcattaaatgatgtatgtggtctatgataaagaccatatacataattaaataaat 10095817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 234
Target Start/End: Complemental strand, 16777993 - 16777930
Alignment:
Q  171 ttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||| ||||||| |||||| |||||| | |||| ||| | ||||||||||||||||||||||    
T  16777993 ttcatttattaaatgatgtatgtagtctttattatagactacatacatcatttaataaatgaat 16777930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 37491280 - 37491375
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| ||||||||||||||  ||||||||  || ||| | ||||| |||||| |||||||| | | |||| | |||||||||||| |||||||||    
T  37491280 tcactattataagcaaaaatttactttttagatttattaaataaatgatgtatgtagtctatataagtgaccatatacatcatttattaaatgaat 37491375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 43813132 - 43813227
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| ||||||||||||||  | ||||||  |||||||| ||||| | |||| ||||||||  ||||||| | |||||||||||| | |||||||    
T  43813132 tcactattataagcaaaaatttaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaat 43813227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 46022555 - 46022650
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||  | |||||||||||  |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  46022555 tcactattataagcaaaaatcaacgttttagatacattcattaaaggatgtatgtagtctgtattatgaaccgcatacatcatttaatgaatgaat 46022650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 48838444 - 48838382
Alignment:
Q  56 tttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatatttta 119  Q
    ||||||||| | |||| |||||||| ||||||| ||||||||||||| |||||| |||||||||    
T  48838444 tttataagaaacatttaacttttttaattcattacataaatgatgta-tttggtctatatttta 48838382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 30869197 - 30869274
Alignment:
Q  51 ttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||| || | ||||||| ||||||||| |||| |||||| ||||| |||||| |||||| || |||||||||    
T  30869197 ttctatttatatgaaacatttgacgtttttgatttattgtataaataatgta-tttggtctatattctagacaagatac 30869274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 7701195 - 7701247
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||| || |||||  |||||||||||||| ||||||    
T  7701195 tcactattataagcaaaaatctacattttagattcattcattaaatgatgtat 7701247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 8169223 - 8169136
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||||||| | |||||||||  |||||||| ||||| |||||| ||||||||  ||| ||| | |||||||||||| | ||||||    
T  8169223 ttataagcaaaagttaactttttagattcattcaataaatgatgtatgtagtctat-atatagaccacatacatcatttattgaatgaa 8169136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 12274816 - 12274868
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||| || ||||| ||||||||| ||||| ||||||    
T  12274816 tcactattataagcaaaaatccacattttatgttcattcaataaatgatgtat 12274868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 16777906 - 16777994
Alignment:
Q  146 tataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||||||||| |  | ||||||  |||||| ||||||| |||||| ||||||||  ||  ||| | ||||||||||||||||||||||    
T  16777906 tataagcaaaagtttaatttttagattcatttattaaatgatgtatgtagtctataataaagactacatacatcatttaataaatgaat 16777994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 30138922 - 30138826
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||| ||||||  || |||||  |||||||| | ||| |||||| |||||| | |||| ||| | | |||||||||||| |||||||    
T  30138922 atcactgttataagtaaaaatttacattttagattcattcaattaatgatgtatatagtctttattatagaccacacacatcatttaatgaatgaat 30138826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 42117489 - 42117561
Alignment:
Q  161 actttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||| |||||| || ||||| ||||||||||||||| |||  ||| | |||||||||||| | ||||||    
T  42117489 actttttaggttcatccaataaatgatgtatttagtctatattagggactagatacatcatttattgaatgaa 42117561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 43103079 - 43103131
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| |||||||||||||| ||| |||||| |||||| ||||||| ||||||    
T  43103079 tcactattataagcaaaaattaacattttaaattcatttattaaatgatgtat 43103131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 2401159 - 2401078
Alignment:
Q  153 aaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||| |||  || ||||||||||| ||||||||||||||| |||||||| |||||||||||||| | |||||||    
T  2401159 aaaaatcaacttattagatttattcattaaatgatgtatttagtctatattattgaccaaatacatcatttattgaatgaat 2401078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 21554101 - 21554174
Alignment:
Q  33 attaattactccattcggtt-ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | ||||| |||||||||| | |||||||||||||| |||||||||||||||||||||||||    
T  21554101 attaattactccttccggtttctatttataaaaaatatttgactttttcgattcattgcataaatgatgtattt 21554174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 48196030 - 48195950
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||| |||||||||||| | |||||||||||||| |||||||||||||||||||| |||||| |||||| || |||||||||    
T  48196030 cggtcctatttataagaaacatttgacttttttggttcattgcataaatgatgta-tttggtctatattctagacaagatac 48195950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 25477558 - 25477610
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  25477558 ctatttataaaaaatatttgacttttttgattcattgcataaatgatgtattt 25477610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 36132648 - 36132700
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  36132648 ctatttataagaaatatttgacttttttgattcattgtataaatgatgtattt 36132700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 48361187 - 48361135
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  48361187 ctatttataagaaacatttgacttttttgattcattgcataaatgatgtattt 48361135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 32714267 - 32714334
Alignment:
Q  38 ttactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||| | ||||| ||||||||||| | ||||||||||||||||||||| ||||||||||||||||    
T  32714267 ttactccttccggttttatttataagaaacatttgacttttttgattcattacataaatgatgtattt 32714334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 35429783 - 35429861
Alignment:
Q  50 gttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||| |||||| |||||| |||||| || |||||||||    
T  35429783 gttctatttataagaaatatttgactttttttattcgttgcataaaagatgta-tttggtctatattctagacaagatac 35429861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 45828412 - 45828490
Alignment:
Q  37 attactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatatt 116  Q
    |||||||| |||| |||||||||||| | |||||||| ||||||||||| || ||||||||||||| |||||||||||||    
T  45828412 attactcccttcgattctatttataaaaaatatttgatttttttgattctttacataaatgatgta-tttggtttatatt 45828490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 43616283 - 43616221
Alignment:
Q  134 tccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagt 196  Q
    |||||||||| ||||||||||||||||| ||||||| |||||| ||||||| |||||||||||    
T  43616283 tccaatcactattataagcaaaaatcaattttttaaattcatttattaaatgatgtatttagt 43616221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 44111744 - 44111833
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||| | |||| |||||||||||| | ||||||||||||||||| ||| ||||||||||||| |||||| |||||| |||| |||||||    
T  44111744 tactccctccggtcctatttataagaaacatttgacttttttgattaattacataaatgatgta-tttggtctatattctaaagaagatac 44111833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 42670899 - 42670824
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||| || |||||| |||||| ||||| ||||||    
T  42670899 ctatttataagaaacatttgactttttagattcattgcataaatgatata-tttggtctatattctaaacgagatac 42670824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 43117850 - 43117932
Alignment:
Q  38 ttactccattcggttctatttataagacatatttgac--ttttttgattcattgcataaatgatgtattttggtttatatttta 119  Q
    |||||||||||||| ||||||||| || |||||| ||  |||||||||| ||||||||||||||||| |||||| |||||||||    
T  43117850 ttactccattcggtcctatttatatgaaatatttaacttttttttgatttattgcataaatgatgta-tttggtctatatttta 43117932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 4386270 - 4386219
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||||||||||    
T  4386270 tatttataagaaaaatttgacttttttgattcattacataaatgatgtattt 4386219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 30192030 - 30191979
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  30192030 tatttataagaaacatttaacttttttgattcattgcataaatgatgtattt 30191979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 38382109 - 38382014
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||| |||||  | |||||||||||| |||||| |||||| | ||||  || | |||||||||||||| |||||||    
T  38382109 tcactattataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccacatacatcatttaatcaatgaat 38382014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 3163029 - 3162979
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtatt 104  Q
    ||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  3163029 tatttataaaaaacatttgacttttttgattcattgcataaatgatgtatt 3162979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 17284734 - 17284823
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||| | |||| ||||||||||   |||||||| |||||||||||||||||||||||||||| | |||| |||||| || |||||||||    
T  17284734 tactccctccggtcctatttataatgaatatttgatttttttgattcattgcataaatgatgta-tgtggtctatattctagacaagatac 17284823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 2401053 - 2401134
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaat 226  Q
    |||||||||||| | |||||||||| |||||||| ||||| |||||||| ||| ||  ||| ||| ||||||||||||||||    
T  2401053 ttataagcaaaagttaactttttaaattcattcaataaatgatgtatttggtcaataatatagactaaatacatcatttaat 2401134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 41328759 - 41328718
Alignment:
Q  51 ttctatttataagacatatttgacttttttgattcattgcat 92  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  41328759 ttctatttataagaaatatttgacttttttgattcattgcat 41328718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 696379 - 696438
Alignment:
Q  69 tttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||||||||||||||||||||||| | ||| || |||||| ||||||||||||    
T  696379 tttgacttttttgattcattgcataaatgatgga-tttagtctatattctaaacaagatac 696438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 764677 - 764736
Alignment:
Q  69 tttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||||||||||||||||||||||||| | ||| || |||||| ||||||||||||    
T  764677 tttgacttttttgattcattgcataaatgatgga-tttagtctatattctaaacaagatac 764736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 19150858 - 19150806
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | |||| ||||||| |||||||||||||||||||||||||    
T  19150858 ctatttataagaaacattttactttttcgattcattgcataaatgatgtattt 19150806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 34616349 - 34616253
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||| |||||||||||||||||| |||||  | |||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  34616349 atcactattataagcaaaaatcaacgttttagatacattcattaaatgatgtatatagtctgtattataaaccgcatacatcatttaatgaatgaat 34616253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 50121572 - 50121520
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||| |||||    
T  50121572 ctatttataagaaacatttgacttttttaattcattgcataaatgatatattt 50121520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 9044401 - 9044448
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgt 101  Q
    |||| |||||| |||||||||||||||||||||||| |||||||||||    
T  9044401 tattcataagaaatatttgacttttttgattcattgtataaatgatgt 9044448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 44061402 - 44061476
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||| |  ||||| |||||||||||||||||||||| ||||| |||||| |||||| || |||||||||    
T  44061402 tatttataagaaacgtttgagttttttgattcattgcataaataatgta-tttggtctatattctagacaagatac 44061476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 46518547 - 46518468
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcattta 224  Q
    |||||||||||||| ||||||||| ||| ||||| ||||| |||||||||||| ||  |||  || ||||||||||||||    
T  46518547 ttataagcaaaaattaactttttaggtttattcaataaatgatgtatttagtcaataatatataccaaatacatcattta 46518468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 52914013 - 52914100
Alignment:
Q  147 ataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||| ||| |||||  ||||||||| |||| |||||| |||||| | |||| ||| | |||||||||||||| |||||||    
T  52914013 ataagcaaaaattaacattttagattcattcatgaaatgatgtatatagtctttattatagaccacatacatcatttaatgaatgaat 52914100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 8347778 - 8347705
Alignment:
Q  55 atttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    |||||||||| | ||||||||||||| |||||||| |||||||||||| || ||| ||||||||| |||| ||||    
T  8347778 atttataagaaacatttgactttttttattcattgtataaatgatgta-ttcggtctatattttatacaaaatac 8347705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 16412383 - 16412317
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| | ||||||||| ||||||| ||||||||||| |||||  |||||||||||| ||||||||    
T  16412383 tactccctccggttctatatataagaaatatttgacttctttgacacattgcataaataatgtattt 16412317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 6975066 - 6975005
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||||||||||||||||| |||| | |||||||||| ||| |||||| ||||||||    
T  6975066 tcactattataagcaaaaatcaacattttgaattcattcatttaatgatgtatgtagtctat 6975005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 31977753 - 31977825
Alignment:
Q  49 ggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttggtttatattttaaac 122  Q
    |||||||||||||||| |||||||| |||||| |||| | ||||||||||| || |||||| |||||| |||||    
T  31977753 ggttctatttataagaaatatttgattttttttattcctagcataaatgatata-tttggtctatattctaaac 31977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 42169071 - 42169108
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  42169071 atttgacttttttgattcattacataaatgatgtattt 42169108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 47181686 - 47181597
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||||||| |||||  | |||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  47181686 ttataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 47181597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 47943847 - 47943810
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  47943847 atttgacatttttgattcattgcataaatgatgtattt 47943810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 48402424 - 48402513
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||||||| |||||  | |||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  48402424 ttataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 48402513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 53225672 - 53225709
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||| |||||||||||||||||||||||||||||||||    
T  53225672 attttacttttttgattcattgcataaatgatgtattt 53225709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 56364339 - 56364428
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||||||| |||||  | |||||||||||| |||||| |||||| | ||||  ||   |||||||||||||| |||||||    
T  56364339 ttataagcaaaaatcaacgttttagatacattcattaaatgatgtatgtagtctgtattataaaccgcatacatcatttaatgaatgaat 56364428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 21142092 - 21142192
Alignment:
Q  134 tccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||| ||||| |||||| ||||||||||| |||||  ||||| |||||||| ||||||||||| |||  ||  ||| | |||||||||| | ||||||||    
T  21142092 tccagtcactattataaacaaaaatcaacattttagattcatgcattaaatgatgtatttagtttataataaagaccatatacatcattaattaaatgaa 21142191  T
Q  234 t 234  Q
    |    
T  21142192 t 21142192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 47181566 - 47181618
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||||||||||| || |||||| |||||||||||||| ||||||    
T  47181566 tcactattataagcaaaaatctacattttaaattcattcattaaatgatgtat 47181618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 47308248 - 47308152
Alignment:
Q  138 atcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||||||||| ||||| |||| |||||  |||||||||| |||||| ||||| |||| | ||||  || | |||||||||| ||| |||||||    
T  47308248 atcactgttataagtaaaaaacaacattttagattcattcatttaattatttatttggtctttattataaaccatatacatcattaaatgaatgaat 47308152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 48361051 - 48361119
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttg 107  Q
    |||||| | |||| |||||||||||| | |||||||||||| |||||||||  ||| ||||||||||||    
T  48361051 tactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttg 48361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 8311364 - 8311325
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaat 184  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  8311364 ttataagcaaaaatcaactttttaaattcattcaataaat 8311325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 19934645 - 19934740
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||| || ||||||||  |||||||| ||||| |||||| | |||||| | || ||| | |||||||||||| | |||||||    
T  19934645 tcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctatttaatggaccacatacatcatttattgaatgaat 19934740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 29006968 - 29006873
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||| || ||||||||| |||||||| ||||| |||||| | |||||| | || ||  | |||||||||||| | |||||||    
T  29006968 tcactattataagcaaaattccactttttaaattcattcaataaatgatgtatgtggtctatttaatggatcacatacatcatttattgaatgaat 29006873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 30938910 - 30938977
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttatt 206  Q
    ||||| ||||||| ||||||||||||||||| |||||| | ||||  ||||||||| ||||| |||||    
T  30938910 tcactattataaggaaaaatcaactttttaaattcatttaataaacaatgtatttaatctatattatt 30938977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 37255814 - 37255720
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||| |  ||||||||| |||||||| |||||||||||| |||| |||  ||| ||| | |||||||||||| | |||||||    
T  37255814 tcactattataagcaaaagttcactttttaaattcattcaataaattatgtatgtagtttat-atatagaccacatacatcatttattgaatgaat 37255720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 37991499 - 37991550
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtatt 104  Q
    |||||||||||| | |||| | ||||||||||||||| ||||||||||||||    
T  37991499 ctatttataagaaacatttaaattttttgattcattgtataaatgatgtatt 37991550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 45096708 - 45096657
Alignment:
Q  54 tatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||| | | ||||||||||||||||| |||||||||||||| |||||    
T  45096708 tatttataaaaaacatttgacttttttgatttattgcataaatgatatattt 45096657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 54164820 - 54164915
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||| || ||||||||  |||||||| ||||| |||||| | |||||| | || ||| | |||||||||||| | |||||||    
T  54164820 tcactattataagcaaaattccactttttagattcattcaataaatgatgtatgtggtctatttaatggaccacatacatcatttattgaatgaat 54164915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 55936120 - 55936025
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    ||||| |||||||||||||||||  |||||  |||||||||||||| |||||| | ||| ||  ||  ||| | |||||||||||||| |||||||    
T  55936120 tcactattataagcaaaaatcaatattttagattcattcattaaatgatgtatgtggtcgataataaagacgatatacatcatttaatgaatgaat 55936025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 42169178 - 42169124
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattttg 107  Q
    |||||||||||| | |||||||||||| |||| |||| |||| ||||||||||||    
T  42169178 ctatttataagaaaaatttgactttttagatttattgaataattgatgtattttg 42169124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 55416432 - 55416370
Alignment:
Q  139 tcactgttataagcaaaaatc-aactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||||||||||||||||||| || ||||||  |||||||||||||| |||||| | ||||||    
T  55416432 tcactgttataagcaaaaatcaaaatttttatattcattcattaaataatgtatgtggtctat 55416370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 16412242 - 16412299
Alignment:
Q  48 cggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||||||||| | | |||||||||| ||||||||| |||| |||| |||||    
T  16412242 cggttctatttataagaaaaaattgactttttagattcattgaataattgatatattt 16412299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 33150676 - 33150615
Alignment:
Q  133 ctccaatcactgttataagcaaaaatc-aactttttaagttcattcattaaattatgtattt 193  Q
    ||||||||||||||||||| |||||   || |||||||||| ||||||||||| ||||||||    
T  33150676 ctccaatcactgttataagtaaaaaaataattttttaagtttattcattaaatgatgtattt 33150615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 35967492 - 35967431
Alignment:
Q  161 actttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatt 222  Q
    |||||||||||||||||||||||| |||||| | ||| || ||||| || | ||||||||||    
T  35967492 actttttaagttcattcattaaatgatgtatgtggtccatattattaaccacatacatcatt 35967431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 55951666 - 55951727
Alignment:
Q  44 cattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||  ||||||||| | ||||||||||||||| |||| ||  |||||||||||||||    
T  55951666 cattcggtcttatttataataaatatttgacttttttaattcgttatataaatgatgtattt 55951727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 2582808 - 2582876
Alignment:
Q  132 tctccaatcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctat 200  Q
    ||||| |||| | |||||||||||||||||  |||||  || ||||||||||| |||||| ||||||||    
T  2582808 tctccgatcattattataagcaaaaatcaatattttagattgattcattaaatgatgtatgtagtctat 2582876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 8347644 - 8347712
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattttg 107  Q
    |||||||| || | |||||||||||| | |||||||||||| |||||||||  | | ||||||||||||    
T  8347644 tactccatccgctcctatttataagaaaaatttgactttttagattcattgagtgattgatgtattttg 8347712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 16578642 - 16578590
Alignment:
Q  139 tcactgttataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||| ||||||| ||||||| || ||||||||||||||| ||||| ||||||    
T  16578642 tcactattataagtaaaaatctacattttaagttcattcaataaatgatgtat 16578590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 33004184 - 33004232
Alignment:
Q  145 ttataagcaaaaatcaactttttaagttcattcattaaattatgtattt 193  Q
    ||||||||||||| ||||||||||| |||||| | ||||| ||||||||    
T  33004184 ttataagcaaaaaacaactttttaaattcattaaataaataatgtattt 33004232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 34321493 - 34321421
Alignment:
Q  161 actttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||||| ||||||||||| ||| |||||| |||||||| ||||  || | |||||||||| ||| ||||||    
T  34321493 actttttaggttcattcatttaatgatgtatgtagtctatattatgaaccacatacatcattaaatgaatgaa 34321421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 28101 - 28176
Alignment:
Q  54 tatttataagacatatttgacttttttg--attcattgcataaatgatgtattttggtttatattttaaacaagata 128  Q
    ||||||||||| |||||| |||||||||  ||||||||||||||||||||| |||| | ||||||||| ||||||||    
T  28101 tatttataagaaatatttaacttttttgtgattcattgcataaatgatgta-tttgatctatattttagacaagata 28176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 15920 - 15831
Alignment:
Q  144 gttataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    |||||| |||||| ||||  ||||||||||||||||||||| || ||| |||||| | |||| ||| | ||||||||||| |||||||||    
T  15920 gttatatgcaaaactcaatattttaagttcattcattaaataatatatgtagtctttattatagactacatacatcatttgataaatgaa 15831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 41368 - 41283
Alignment:
Q  149 aagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaat 234  Q
    |||||||| ||||  |||||||||||||| |||||| |||| | |||||| | || | ||| | |||||||||||||| |||||||    
T  41368 aagcaaaattcaatattttaagttcattcgttaaataatgtgtgtagtctttattctagactacatacatcatttaatgaatgaat 41283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 16678 - 16612
Alignment:
Q  39 tactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||| ||||||  ||||||||||| |  ||||||||||||||||||||| |||||| ||||||||    
T  16678 tactccgttcggtcttatttataagaaacgtttgacttttttgattcattgtataaataatgtattt 16612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 16679 - 16739
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattttggtttatattttaaacaagatac 129  Q
    ||||||||||||||||||||||||||||  ||||| |||||| |||||| || |||||||||    
T  16679 atttgacttttttgattcattgcataaaatatgta-tttggtctatattctagacaagatac 16739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 17449 - 17535
Alignment:
Q  146 tataagcaaaaatcaactttttaagttcattcattaaattatgtatttagtctatgttattgacaaaatacatcatttaataaatgaa 233  Q
    ||||||||||||| || |||||||||||||||||| ||| |||||| | |||||| ||||  || | |||||||||| ||| ||||||    
T  17449 tataagcaaaaat-aattttttaagttcattcatttaatgatgtatgtggtctatattataaaccacatacatcattaaatgaatgaa 17535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 156766 - 156833
Alignment:
Q  38 ttactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||| | |||| |||||||||||| | |||| |||||||| |||||||||||||| ||| |||||    
T  156766 ttactccctccggtcctatttataagaaacatttaacttttttaattcattgcataaacgatatattt 156833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 5450 - 5405
Alignment:
Q  146 tataagcaaaaatcaactttttaagttcattcattaaattatgtat 191  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||||||||    
T  5450 tataagcaaaattcacctttttatgttcattcatttaattatgtat 5405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 1561 - 1598
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  1561 atttgacttttttgattcgttgcataaatgatgcattt 1598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 1556 - 1520
Alignment:
Q  68 atttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  1556 atttgacttttttgattca-tgcataaatgatgtattt 1520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 71845 - 71914
Alignment:
Q  36 aattactccattcggttctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    ||||||||| |||| | |||||||||||| |  ||| | ||||||||||||||| |||||| ||||||||    
T  71845 aattactcccttcgatcctatttataagaaaattttaatttttttgattcattgtataaattatgtattt 71914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 5285 - 5336
Alignment:
Q  53 ctatttataagacatatttgacttttttgattcattgcataaatgatgtattt 105  Q
    |||||||||||| | ||||||||||||| ||| ||||||||||| ||||||||    
T  5285 ctatttataagaaacatttgactttttt-attgattgcataaattatgtattt 5336  T

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