View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9874_low_11 (Length: 250)

Name: NF9874_low_11
Description: NF9874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9874_low_11
NF9874_low_11
[»] chr3 (77 HSPs)
chr3 (1-241)||(38507666-38507907)
chr3 (2-236)||(46416061-46416295)
chr3 (1-236)||(27043012-27043244)
chr3 (1-127)||(10030458-10030584)
chr3 (1-242)||(13648313-13648549)
chr3 (1-127)||(51800979-51801105)
chr3 (1-94)||(33464176-33464269)
chr3 (68-127)||(10125381-10125440)
chr3 (68-127)||(10181814-10181873)
chr3 (68-127)||(10258183-10258242)
chr3 (160-241)||(28951884-28951967)
chr3 (153-224)||(32080092-32080163)
chr3 (1-94)||(10257744-10257838)
chr3 (159-241)||(34407083-34407167)
chr3 (170-225)||(18020254-18020309)
chr3 (177-224)||(43774222-43774269)
chr3 (1-94)||(10030021-10030115)
chr3 (172-224)||(31902211-31902263)
chr3 (157-241)||(23237380-23237466)
chr3 (160-219)||(42665919-42665978)
chr3 (177-224)||(43566807-43566854)
chr3 (1-94)||(10181374-10181468)
chr3 (177-215)||(16006517-16006555)
chr3 (159-224)||(21248983-21249048)
chr3 (171-224)||(22432916-22432969)
chr3 (171-224)||(24130596-24130649)
chr3 (159-224)||(24160521-24160586)
chr3 (171-212)||(31108765-31108806)
chr3 (159-204)||(42935477-42935522)
chr3 (177-225)||(166824-166872)
chr3 (172-241)||(16999946-17000017)
chr3 (180-224)||(24559426-24559470)
chr3 (160-241)||(33533221-33533304)
chr3 (180-224)||(36331740-36331784)
chr3 (177-225)||(45431663-45431711)
chr3 (180-224)||(49146121-49146165)
chr3 (176-224)||(49639065-49639113)
chr3 (171-223)||(55318055-55318107)
chr3 (177-224)||(13539975-13540022)
chr3 (177-224)||(13874845-13874892)
chr3 (157-224)||(19137656-19137723)
chr3 (177-224)||(24537864-24537911)
chr3 (177-224)||(27066647-27066694)
chr3 (177-224)||(32508805-32508852)
chr3 (80-115)||(33464877-33464912)
chr3 (177-224)||(35483306-35483353)
chr3 (160-219)||(36842204-36842263)
chr3 (177-224)||(46328935-46328982)
chr3 (181-224)||(48347287-48347330)
chr3 (177-224)||(49019220-49019267)
chr3 (177-224)||(50676878-50676925)
chr3 (177-224)||(54983716-54983763)
chr3 (178-241)||(7020792-7020857)
chr3 (186-224)||(7938288-7938326)
chr3 (160-210)||(17262270-17262320)
chr3 (179-217)||(32665325-32665363)
chr3 (159-201)||(49299233-49299275)
chr3 (1-94)||(51801429-51801523)
chr3 (171-212)||(2903757-2903798)
chr3 (14-94)||(10124955-10125036)
chr3 (177-222)||(31419622-31419667)
chr3 (177-218)||(38176097-38176138)
chr3 (159-204)||(40160792-40160837)
chr3 (171-204)||(47497135-47497168)
chr3 (160-224)||(4045628-4045692)
chr3 (170-235)||(4478372-4478439)
chr3 (187-219)||(6284919-6284951)
chr3 (180-224)||(9625020-9625064)
chr3 (180-220)||(10959174-10959214)
chr3 (173-213)||(11668276-11668316)
chr3 (171-240)||(19149443-19149514)
chr3 (160-204)||(23025954-23025998)
chr3 (180-224)||(27183695-27183739)
chr3 (177-225)||(37756424-37756472)
chr3 (177-216)||(41121916-41121956)
chr3 (172-224)||(50724404-50724456)
chr3 (172-224)||(50788392-50788444)
[»] chr1 (71 HSPs)
chr1 (9-241)||(28283795-28284027)
chr1 (1-127)||(33659860-33659986)
chr1 (1-127)||(37334970-37335103)
chr1 (7-123)||(50615093-50615207)
chr1 (7-123)||(50622921-50623035)
chr1 (160-241)||(16182827-16182910)
chr1 (159-224)||(9768802-9768867)
chr1 (159-224)||(48260182-48260247)
chr1 (160-241)||(2643809-2643892)
chr1 (160-241)||(9769574-9769657)
chr1 (1-63)||(26244444-26244506)
chr1 (159-241)||(3341729-3341813)
chr1 (159-241)||(41677078-41677162)
chr1 (159-241)||(43020629-43020713)
chr1 (159-236)||(11238021-11238100)
chr1 (177-224)||(15774323-15774370)
chr1 (171-235)||(24168584-24168650)
chr1 (177-224)||(49251406-49251453)
chr1 (159-204)||(27654998-27655043)
chr1 (160-209)||(38028589-38028638)
chr1 (171-224)||(50199481-50199534)
chr1 (160-224)||(1576115-1576179)
chr1 (160-203)||(195102-195145)
chr1 (177-224)||(4616910-4616957)
chr1 (177-224)||(11405493-11405540)
chr1 (177-224)||(19424083-19424130)
chr1 (157-241)||(26349970-26350055)
chr1 (159-213)||(9976377-9976431)
chr1 (181-219)||(12148588-12148626)
chr1 (171-216)||(2903032-2903077)
chr1 (181-222)||(10123068-10123109)
chr1 (159-212)||(12553243-12553296)
chr1 (160-217)||(23750194-23750251)
chr1 (177-222)||(25421893-25421938)
chr1 (172-224)||(3797892-3797944)
chr1 (180-224)||(29491507-29491551)
chr1 (177-232)||(32635168-32635224)
chr1 (177-213)||(32711155-32711191)
chr1 (172-224)||(41182811-41182863)
chr1 (177-224)||(749598-749644)
chr1 (177-224)||(3532985-3533031)
chr1 (177-224)||(17056891-17056938)
chr1 (177-224)||(21884612-21884659)
chr1 (172-215)||(22779269-22779312)
chr1 (177-212)||(30649142-30649177)
chr1 (171-214)||(33844664-33844707)
chr1 (171-214)||(33949271-33949314)
chr1 (177-224)||(38851672-38851719)
chr1 (177-212)||(42831996-42832031)
chr1 (177-224)||(50859378-50859425)
chr1 (181-219)||(8893902-8893940)
chr1 (159-217)||(23973475-23973533)
chr1 (181-219)||(49620014-49620052)
chr1 (159-224)||(1721177-1721242)
chr1 (159-224)||(4288625-4288690)
chr1 (1-38)||(4426273-4426310)
chr1 (181-222)||(7438660-7438701)
chr1 (159-224)||(18003853-18003918)
chr1 (159-224)||(19866512-19866577)
chr1 (171-212)||(30049832-30049873)
chr1 (180-224)||(2208652-2208696)
chr1 (160-204)||(3261915-3261959)
chr1 (2-38)||(3672568-3672604)
chr1 (180-224)||(17350098-17350142)
chr1 (183-215)||(21635603-21635635)
chr1 (181-225)||(25800348-25800392)
chr1 (2-38)||(28284591-28284627)
chr1 (177-232)||(32660858-32660914)
chr1 (170-210)||(37262111-37262151)
chr1 (177-213)||(37733803-37733839)
chr1 (177-205)||(38019958-38019986)
[»] chr2 (64 HSPs)
chr2 (1-229)||(38825769-38825999)
chr2 (1-118)||(40133658-40133775)
chr2 (142-233)||(40133507-40133598)
chr2 (9-94)||(2285557-2285643)
chr2 (174-224)||(37912466-37912516)
chr2 (160-224)||(22014646-22014710)
chr2 (157-241)||(18089747-18089833)
chr2 (157-204)||(35352395-35352442)
chr2 (1-94)||(1156159-1156253)
chr2 (159-224)||(1244606-1244671)
chr2 (159-224)||(34107311-34107376)
chr2 (171-240)||(32288395-32288466)
chr2 (177-224)||(10262776-10262823)
chr2 (157-224)||(20942100-20942167)
chr2 (81-122)||(2283731-2283772)
chr2 (179-224)||(36520793-36520838)
chr2 (159-219)||(12206540-12206600)
chr2 (180-224)||(44187741-44187785)
chr2 (177-224)||(8234803-8234850)
chr2 (177-224)||(11133113-11133160)
chr2 (177-224)||(11837026-11837073)
chr2 (159-241)||(10602023-10602108)
chr2 (1-94)||(40129198-40129292)
chr2 (183-224)||(2304327-2304368)
chr2 (159-241)||(39334874-39334958)
chr2 (171-240)||(4529768-4529839)
chr2 (159-236)||(22355106-22355185)
chr2 (172-224)||(23405236-23405288)
chr2 (160-216)||(45314455-45314511)
chr2 (177-224)||(580794-580841)
chr2 (81-112)||(1156867-1156898)
chr2 (177-224)||(2114446-2114493)
chr2 (177-224)||(3037633-3037680)
chr2 (177-224)||(3179361-3179408)
chr2 (157-212)||(6952321-6952376)
chr2 (181-224)||(9796934-9796977)
chr2 (177-224)||(17154686-17154733)
chr2 (177-233)||(19905666-19905724)
chr2 (171-235)||(25406655-25406721)
chr2 (181-224)||(29664640-29664683)
chr2 (177-224)||(30474206-30474253)
chr2 (171-241)||(35694785-35694856)
chr2 (182-224)||(3487123-3487165)
chr2 (157-219)||(32256178-32256240)
chr2 (186-224)||(33587129-33587167)
chr2 (160-209)||(5807761-5807810)
chr2 (160-213)||(6282283-6282336)
chr2 (159-224)||(14307687-14307752)
chr2 (159-212)||(29713082-29713135)
chr2 (160-197)||(29896155-29896192)
chr2 (171-204)||(38807938-38807971)
chr2 (179-224)||(41699139-41699184)
chr2 (171-241)||(44132568-44132640)
chr2 (171-224)||(45110199-45110252)
chr2 (160-196)||(5029094-5029130)
chr2 (160-196)||(17896883-17896919)
chr2 (180-224)||(29035013-29035057)
chr2 (180-224)||(30392818-30392862)
chr2 (157-197)||(30737045-30737085)
chr2 (180-224)||(32527091-32527135)
chr2 (177-217)||(33613616-33613656)
chr2 (180-224)||(36190091-36190135)
chr2 (162-210)||(41305062-41305110)
chr2 (177-225)||(42541191-42541239)
[»] chr7 (64 HSPs)
chr7 (2-235)||(47514229-47514463)
chr7 (1-127)||(28870317-28870443)
chr7 (9-118)||(7475060-7475169)
chr7 (142-236)||(7475227-7475321)
chr7 (160-235)||(16814721-16814798)
chr7 (159-218)||(26734264-26734323)
chr7 (1-94)||(47513570-47513664)
chr7 (160-224)||(11808075-11808140)
chr7 (160-242)||(44409218-44409301)
chr7 (163-219)||(3955042-3955098)
chr7 (180-224)||(14818379-14818423)
chr7 (180-224)||(15265377-15265421)
chr7 (160-204)||(24579280-24579324)
chr7 (170-241)||(37995550-37995622)
chr7 (180-224)||(41417289-41417333)
chr7 (177-224)||(924303-924350)
chr7 (157-241)||(35195861-35195947)
chr7 (157-224)||(37917429-37917496)
chr7 (186-224)||(3392507-3392545)
chr7 (177-219)||(37129370-37129412)
chr7 (179-224)||(23685567-23685612)
chr7 (1-94)||(28869863-28869961)
chr7 (159-224)||(32309141-32309206)
chr7 (160-224)||(2567826-2567890)
chr7 (171-224)||(5773166-5773221)
chr7 (177-233)||(14707320-14707376)
chr7 (177-233)||(20529924-20529980)
chr7 (177-224)||(2366394-2366441)
chr7 (185-241)||(7465484-7465542)
chr7 (177-224)||(21285364-21285411)
chr7 (177-224)||(22660778-22660825)
chr7 (177-224)||(22965969-22966016)
chr7 (177-224)||(29658283-29658330)
chr7 (177-220)||(30152782-30152825)
chr7 (177-224)||(30644206-30644253)
chr7 (177-224)||(37665781-37665828)
chr7 (177-216)||(43635633-43635672)
chr7 (172-236)||(48174990-48175056)
chr7 (159-225)||(1649188-1649254)
chr7 (186-224)||(9498006-9498044)
chr7 (177-219)||(15025198-15025240)
chr7 (186-224)||(24188510-24188548)
chr7 (181-219)||(31793510-31793548)
chr7 (181-219)||(48433725-48433763)
chr7 (163-196)||(7392303-7392336)
chr7 (157-214)||(8903786-8903843)
chr7 (159-212)||(10958082-10958135)
chr7 (191-224)||(23817228-23817261)
chr7 (181-222)||(24030024-24030065)
chr7 (159-241)||(35498416-35498499)
chr7 (160-209)||(42181471-42181520)
chr7 (172-224)||(1513524-1513576)
chr7 (177-233)||(5228098-5228154)
chr7 (160-224)||(10020463-10020527)
chr7 (177-233)||(10091468-10091524)
chr7 (172-224)||(10474518-10474570)
chr7 (177-234)||(14102486-14102545)
chr7 (177-234)||(14412503-14412562)
chr7 (156-241)||(14772326-14772412)
chr7 (156-241)||(15222778-15222864)
chr7 (180-224)||(25711145-25711189)
chr7 (160-192)||(30431931-30431963)
chr7 (181-213)||(42841796-42841828)
chr7 (177-233)||(48258195-48258251)
[»] chr4 (72 HSPs)
chr4 (1-127)||(29893816-29893942)
chr4 (1-127)||(33394914-33395040)
chr4 (1-127)||(50646530-50646656)
chr4 (1-123)||(44087970-44088092)
chr4 (5-118)||(48542298-48542411)
chr4 (142-236)||(48542147-48542241)
chr4 (144-241)||(43323696-43323793)
chr4 (1-94)||(29893370-29893464)
chr4 (1-94)||(33394486-33394580)
chr4 (171-236)||(49319416-49319483)
chr4 (157-242)||(40261201-40261286)
chr4 (160-218)||(21023346-21023404)
chr4 (170-224)||(29785187-29785241)
chr4 (159-236)||(24039910-24039986)
chr4 (159-212)||(49039438-49039491)
chr4 (159-224)||(54264965-54265030)
chr4 (180-224)||(52031244-52031288)
chr4 (177-224)||(3442880-3442927)
chr4 (177-224)||(6330947-6330994)
chr4 (170-241)||(18740920-18740994)
chr4 (160-236)||(27921919-27921997)
chr4 (172-236)||(33076553-33076619)
chr4 (177-224)||(38433348-38433395)
chr4 (177-219)||(30295555-30295597)
chr4 (177-219)||(30324457-30324499)
chr4 (159-217)||(33359861-33359919)
chr4 (1-94)||(40260594-40260688)
chr4 (171-212)||(4153223-4153264)
chr4 (159-212)||(37997839-37997892)
chr4 (171-224)||(45011414-45011467)
chr4 (157-225)||(6202639-6202707)
chr4 (180-224)||(8690251-8690295)
chr4 (176-224)||(9924893-9924941)
chr4 (177-233)||(37574300-37574356)
chr4 (160-240)||(4419680-4419762)
chr4 (177-224)||(12856221-12856268)
chr4 (177-224)||(20753136-20753183)
chr4 (157-224)||(32048551-32048617)
chr4 (186-217)||(32339371-32339402)
chr4 (177-224)||(37032190-37032237)
chr4 (177-224)||(38690703-38690750)
chr4 (177-224)||(47017957-47018004)
chr4 (181-219)||(2832086-2832124)
chr4 (186-224)||(30057262-30057300)
chr4 (186-224)||(40051662-40051700)
chr4 (186-224)||(42381105-42381143)
chr4 (181-219)||(43362183-43362221)
chr4 (181-215)||(55485841-55485875)
chr4 (171-224)||(20166353-20166406)
chr4 (159-224)||(20610776-20610841)
chr4 (159-241)||(41492492-41492575)
chr4 (183-224)||(42411471-42411512)
chr4 (23-76)||(43323536-43323589)
chr4 (177-206)||(49607605-49607634)
chr4 (159-212)||(54854172-54854225)
chr4 (180-224)||(9477422-9477466)
chr4 (180-224)||(9692999-9693043)
chr4 (180-224)||(14149830-14149874)
chr4 (180-224)||(22751046-22751090)
chr4 (180-224)||(28520745-28520789)
chr4 (177-233)||(34974729-34974785)
chr4 (173-217)||(35230302-35230346)
chr4 (177-225)||(35747493-35747541)
chr4 (180-224)||(36257731-36257775)
chr4 (180-224)||(36954174-36954218)
chr4 (180-224)||(37889620-37889664)
chr4 (180-233)||(40150499-40150554)
chr4 (181-233)||(44251342-44251394)
chr4 (160-224)||(47416505-47416569)
chr4 (180-224)||(48968224-48968268)
chr4 (180-224)||(56546463-56546507)
chr4 (177-233)||(56555576-56555632)
[»] chr5 (58 HSPs)
chr5 (1-127)||(38943114-38943240)
chr5 (9-122)||(19033564-19033677)
chr5 (9-118)||(37922735-37922844)
chr5 (153-236)||(37922897-37922980)
chr5 (1-94)||(2332263-2332357)
chr5 (163-236)||(32252916-32252991)
chr5 (9-94)||(19033139-19033225)
chr5 (171-241)||(20186884-20186954)
chr5 (159-224)||(11246487-11246552)
chr5 (171-241)||(17557048-17557119)
chr5 (159-242)||(31556835-31556920)
chr5 (160-234)||(17137861-17137937)
chr5 (160-217)||(42553135-42553192)
chr5 (177-224)||(843379-843426)
chr5 (177-224)||(1244738-1244785)
chr5 (177-224)||(15570148-15570194)
chr5 (181-224)||(18175244-18175287)
chr5 (159-218)||(27006383-27006442)
chr5 (160-219)||(29561690-29561749)
chr5 (177-224)||(33800930-33800977)
chr5 (172-239)||(18101955-18102024)
chr5 (9-94)||(37923425-37923511)
chr5 (160-213)||(3535930-3535983)
chr5 (180-224)||(4674829-4674873)
chr5 (177-233)||(20191469-20191525)
chr5 (180-224)||(27278768-27278812)
chr5 (180-224)||(36045148-36045192)
chr5 (172-224)||(38129019-38129071)
chr5 (160-224)||(39684275-39684339)
chr5 (159-240)||(40384270-40384353)
chr5 (157-209)||(41539366-41539418)
chr5 (81-112)||(2331551-2331582)
chr5 (177-224)||(7234883-7234930)
chr5 (177-233)||(8015861-8015919)
chr5 (177-224)||(18872558-18872605)
chr5 (160-223)||(22687875-22687938)
chr5 (157-224)||(25660949-25661016)
chr5 (177-224)||(28378076-28378123)
chr5 (177-224)||(34921125-34921172)
chr5 (159-239)||(37986860-37986942)
chr5 (160-210)||(6291046-6291096)
chr5 (171-225)||(16969673-16969727)
chr5 (177-211)||(27025440-27025474)
chr5 (159-213)||(28537183-28537237)
chr5 (170-224)||(31907688-31907742)
chr5 (159-224)||(19608650-19608715)
chr5 (159-212)||(22396981-22397034)
chr5 (171-224)||(24651173-24651226)
chr5 (159-204)||(38361542-38361587)
chr5 (1-38)||(38943655-38943692)
chr5 (180-224)||(1463908-1463952)
chr5 (159-236)||(7147012-7147091)
chr5 (180-224)||(10943753-10943797)
chr5 (172-216)||(15106893-15106937)
chr5 (180-224)||(16720592-16720636)
chr5 (180-224)||(20735189-20735233)
chr5 (180-224)||(37303971-37304015)
chr5 (177-213)||(38618692-38618728)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-123)||(60324-60446)
[»] chr8 (55 HSPs)
chr8 (1-118)||(43139176-43139293)
chr8 (1-127)||(21570889-21571015)
chr8 (142-233)||(43139355-43139446)
chr8 (164-219)||(16935629-16935684)
chr8 (160-241)||(7345446-7345529)
chr8 (177-224)||(23239161-23239208)
chr8 (177-224)||(43468716-43468763)
chr8 (1-94)||(21570443-21570537)
chr8 (158-224)||(28979063-28979129)
chr8 (171-224)||(18577150-18577203)
chr8 (159-224)||(22847255-22847320)
chr8 (159-224)||(27821898-27821963)
chr8 (180-233)||(31129331-31129383)
chr8 (171-224)||(39432333-39432386)
chr8 (160-216)||(220356-220412)
chr8 (172-224)||(574262-574313)
chr8 (160-216)||(689511-689567)
chr8 (160-216)||(733979-734035)
chr8 (160-216)||(857875-857931)
chr8 (176-224)||(4798551-4798599)
chr8 (180-224)||(10309674-10309718)
chr8 (180-224)||(33982227-33982271)
chr8 (159-239)||(35779775-35779855)
chr8 (177-224)||(9524994-9525041)
chr8 (177-224)||(10199753-10199800)
chr8 (177-224)||(10201299-10201346)
chr8 (177-224)||(11822999-11823046)
chr8 (181-224)||(13537326-13537369)
chr8 (181-224)||(13626874-13626917)
chr8 (177-224)||(13702363-13702410)
chr8 (177-216)||(14010783-14010822)
chr8 (177-224)||(15042376-15042423)
chr8 (172-211)||(17467327-17467366)
chr8 (177-224)||(24608494-24608541)
chr8 (159-235)||(25470839-25470917)
chr8 (171-213)||(26657904-26657947)
chr8 (177-224)||(30659990-30660037)
chr8 (177-224)||(34073250-34073297)
chr8 (177-224)||(42762041-42762088)
chr8 (181-224)||(43456667-43456710)
chr8 (177-224)||(43508459-43508506)
chr8 (159-201)||(6325329-6325371)
chr8 (162-224)||(19925095-19925157)
chr8 (1-94)||(43139894-43139988)
chr8 (163-216)||(13654824-13654877)
chr8 (163-216)||(13713466-13713519)
chr8 (180-233)||(17855677-17855730)
chr8 (159-224)||(24572844-24572909)
chr8 (171-241)||(30500486-30500558)
chr8 (180-224)||(2696570-2696614)
chr8 (180-224)||(2800056-2800100)
chr8 (160-216)||(4604347-4604403)
chr8 (177-217)||(14683920-14683960)
chr8 (177-217)||(33570440-33570480)
chr8 (180-212)||(38790586-38790618)
[»] scaffold0072 (2 HSPs)
scaffold0072 (1-94)||(16264-16357)
scaffold0072 (80-115)||(16965-17000)
[»] chr6 (36 HSPs)
chr6 (1-94)||(6608385-6608478)
chr6 (159-224)||(26669652-26669717)
chr6 (160-224)||(4844180-4844244)
chr6 (80-122)||(6606751-6606793)
chr6 (171-224)||(30833054-30833107)
chr6 (177-233)||(9455867-9455923)
chr6 (160-241)||(32540945-32541028)
chr6 (177-224)||(2970226-2970273)
chr6 (177-233)||(7563587-7563645)
chr6 (177-224)||(9491746-9491793)
chr6 (171-239)||(24256936-24257006)
chr6 (177-224)||(26528604-26528651)
chr6 (159-213)||(19680241-19680295)
chr6 (171-224)||(5544313-5544366)
chr6 (160-224)||(20149973-20150038)
chr6 (160-224)||(22182794-22182859)
chr6 (159-219)||(1395583-1395643)
chr6 (172-241)||(1488106-1488177)
chr6 (180-216)||(19642561-19642597)
chr6 (180-224)||(29284155-29284199)
chr6 (177-224)||(753323-753370)
chr6 (177-224)||(6530215-6530262)
chr6 (81-112)||(6607713-6607744)
chr6 (177-224)||(20568268-20568315)
chr6 (157-237)||(30668175-30668257)
chr6 (159-197)||(7234029-7234067)
chr6 (171-201)||(8253596-8253626)
chr6 (181-236)||(25064684-25064741)
chr6 (183-224)||(2945633-2945674)
chr6 (159-212)||(6455502-6455555)
chr6 (183-224)||(9064903-9064944)
chr6 (172-213)||(30938439-30938480)
chr6 (159-224)||(34524912-34524977)
chr6 (180-224)||(3294804-3294848)
chr6 (180-224)||(6144002-6144045)
chr6 (160-224)||(7374044-7374108)
[»] scaffold0119 (1 HSPs)
scaffold0119 (159-224)||(1076-1141)
[»] scaffold0054 (1 HSPs)
scaffold0054 (159-224)||(67198-67263)
[»] scaffold0010 (1 HSPs)
scaffold0010 (184-227)||(236347-236390)
[»] scaffold0002 (1 HSPs)
scaffold0002 (160-235)||(440423-440500)
[»] scaffold0219 (1 HSPs)
scaffold0219 (176-224)||(6643-6691)
[»] scaffold0178 (1 HSPs)
scaffold0178 (180-224)||(4360-4404)


Alignment Details
Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 38507907 - 38507666
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| |||| | |||||||||||||  ||||||||| |||| |||||||||||||||||    
T  38507907 aaattgccccatcttagatcaattttgttttatttgctgttacatttacaccttacattttatattccaatttatagtcctactcaattataatttgact 38507808  T
Q  101 caaattaatttacttgtaaatacatta-nnnnnnnnnnnnnngtcagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctg 199  Q
    |||||||||||||||||||||||||||               |||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |     
T  38507807 caaattaatttacttgtaaatacattatttttgattttttttgtcagattgcatactgactagaattcagattttttaaggtgaataagtggggtgttta 38507708  T
Q  200 gggtttgaaccccgacccctacataataatgcatgtctctgc 241  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  38507707 gggtttgaaccccgacccctatataataatgcatgtccctgc 38507666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 46416061 - 46416295
Alignment:
Q  2 aattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgactc 101  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| ||| ||||||||||||||||||    
T  46416061 aattgccccatcttaaatcaattttgttttatttgctgttacatgtacatcctgcattttatattccaatttatagctctactcaattataatttgactc 46416160  T
Q  102 aaattaatttacttgtaaatacattannnnnnnnnnnnnngtcagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctggg 201  Q
    ||||||||||||||||||||||||||              |||| ||||| ||| ||||| |||| |||||||||||||||||||||||||  || ||||    
T  46416161 aaattaatttacttgtaaatacattatttttgatttttttgtcatattgcctactgactataatttagatttttcaaggtgaataagtgggaagtttggg 46416260  T
Q  202 gtttgaaccccgacccctacataataatgcatgtc 236  Q
    |||| ||||||||||||||||||||||||||||||    
T  46416261 gtttaaaccccgacccctacataataatgcatgtc 46416295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 27043012 - 27043244
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||||||| |||||| ||||||||||    
T  27043012 aaattgctccatcttaaatcaattttgttttatttgctgttacatgtacatcctgcattttatactccaatttatagccctactcaatt-taatttgact 27043110  T
Q  101 caaattaatttacttgtaaatacatta-nnnnnnnnnnnnnngtcagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctg 199  Q
    ||||||||||||||| |||||||||||               || ||||||| |||||||||||||||||||||||||||||||||||   |||||||||    
T  27043111 caaattaatttacttataaatacattattttttattttttttgttagattgcctaccgactagaattcagatttttcaaggtgaataa---gggtgtctg 27043207  T
Q  200 gggtttgaaccccgacccctacataataatgcatgtc 236  Q
    |||||||||||||| ||||||||||||||||||||||    
T  27043208 gggtttgaaccccggcccctacataataatgcatgtc 27043244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 10030584 - 10030458
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  10030584 aaattgccccatcttagatcaattttgttttatttgatgttacatgtacaccctgcattttatattctaatttatagccctactcaattataatttgact 10030485  T
Q  101 caaattaatttacttgtaaatacatta 127  Q
    |||||||||||| ||||||||||||||    
T  10030484 caaattaatttatttgtaaatacatta 10030458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 13648549 - 13648313
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||| |||||||||||| ||||||||||| || | |||||||||||||||    
T  13648549 aaattgccccatcttagatcaattttgttttatttcctgttacatgtacaccctgcattttatatttcaatttatagccgtacttaattataatttgact 13648450  T
Q  101 caaattaatttacttgtaaatacattannnnnnnnnnnnnngtcagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctgg 200  Q
    ||    |||||||||||| ||||||||              ||| |||||| ||| |||| ||||| |||||||||||||||||||||| |||||||||     
T  13648449 ca----aatttacttgtatatacattattttttatttttttgtcggattgcctactgactggaatttagatttttcaaggtgaataagt-gggtgtctga 13648355  T
Q  201 ggtttgaaccccgacccctacataataatgcatgtctctgct 242  Q
    |||||||||  |||||| |||||||||||||||||| |||||    
T  13648354 ggtttgaacttcgacccttacataataatgcatgtccctgct 13648313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 51800979 - 51801105
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||| |||| |||||||||||||||    
T  51800979 aaattgccccatcttagatcaattttgttttatttgttgttacatgtacaccctgcattttatatttcaatttatagccttatttaattataatttgact 51801078  T
Q  101 caaattaatttacttgtaaatacatta 127  Q
    ||||||||||||||||| |||||||||    
T  51801079 caaattaatttacttgttaatacatta 51801105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33464176 - 33464269
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataat 94  Q
    ||||||| ||||||||  |||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||| |  |||| |||||||||    
T  33464176 aaattgccccatcttaaatcaattttgttttatttgctattagttgtacatcctacattttatattctaatttatacctttatttaattataat 33464269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 10125440 - 10125381
Alignment:
Q  68 taatttatagccctattcaattataatttgactcaaattaatttacttgtaaatacatta 127  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  10125440 taatttatagccttactcaattataatttgactcaaattaatttatttgtaaatacatta 10125381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 10181873 - 10181814
Alignment:
Q  68 taatttatagccctattcaattataatttgactcaaattaatttacttgtaaatacatta 127  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  10181873 taatttatagccttactcaattataatttgactcaaattaatttatttgtaaatacatta 10181814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 10258242 - 10258183
Alignment:
Q  68 taatttatagccctattcaattataatttgactcaaattaatttacttgtaaatacatta 127  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  10258242 taatttatagccttactcaattataatttgactcaaattaatttatttgtaaatacatta 10258183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 28951967 - 28951884
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    ||||||||| |||||||||||||||||||||||||||  |||||| |||||| |||||||  | |||||||||||||| |||||    
T  28951967 tagaattcacatttttcaaggtgaataagtggggtgttcggggttcgaaccctgacccctgcatataataatgcatgtatctgc 28951884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 32080163 - 32080092
Alignment:
Q  153 taccgactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||  |||||| |||||||||||| ||||||    
T  32080163 taccggctagaattcacctttttcaaggtgaataagtggggtgttcggggttcgaaccccgacccatacata 32080092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 10257744 - 10257838
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcct-acattttatattttaatttatagccctattcaattataat 94  Q
    ||||||||| ||||||| |||||||||||||||||||| |||  |||||||||| |  |||||||||  |||||||| || ||||||||||||||    
T  10257744 aaattgctctatcttagatcaattttgttttatttgctattagttgtacatcctgaatttttatattccaatttataaccatattcaattataat 10257838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 34407083 - 34407167
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    ||||||||||   |||||||| |||||||||||||||||||||||| ||||||| ||||||  | ||||||||||||||| ||||    
T  34407083 ctagaattcatcattttcaagatgaataagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtccctgc 34407167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 18020254 - 18020309
Alignment:
Q  170 atttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataa 225  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  18020254 attttttaaggtaaataagtggggtgtctggggtttgaacaccgacccctgcataa 18020309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 43774269 - 43774222
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  43774269 aaggtgaataagtggggtgtctggggttcgaaccccgacccctgcata 43774222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 10030021 - 10030115
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcct-acattttatattttaatttatagccctattcaattataat 94  Q
    ||||||||| ||||||| |||||||||||||||||||| |||  |||||||||| |  |||||||||  |||||| | || ||||||||||||||    
T  10030021 aaattgctctatcttagatcaattttgttttatttgctattagttgtacatcctgaatttttatattccaatttacaaccatattcaattataat 10030115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 31902211 - 31902263
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| ||||||||||||||||||||| || ||| |||||||||||||||||||    
T  31902211 tttttaaggtgaataagtggggtgtccggagttcgaaccccgacccctacata 31902263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 23237466 - 23237380
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgtctctgc 241  Q
    ||||||||||||  |||||||| ||||||| ||||| |||| || ||| |||| |||||||||||  ||||||||||||||| ||||    
T  23237466 gactagaattcacctttttcaacgtgaatatgtgggatgtccggagttcgaactccgacccctacatataataatgcatgtccctgc 23237380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 42665919 - 42665978
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    |||||||||  ||||||||||||||||||||||||||| || ||| |||| |||||||||    
T  42665919 tagaattcatttttttcaaggtgaataagtggggtgtccggagttcgaactccgacccct 42665978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 43566807 - 43566854
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  43566807 aaggtgaataagtggggtgtctgaggttcgaaccccgacccctgcata 43566854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 10181374 - 10181468
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcct-acattttatattttaatttatagccctattcaattataat 94  Q
    ||||||||||||||||| ||||||||||||||||| || |||  |||||||||| |  |||||||||  |||||||| |  |||||| |||||||    
T  10181374 aaattgctccatcttagatcaattttgttttatttactattagttgtacatcctgaatttttatattccaatttataacaatattcatttataat 10181468  T

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Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 16006517 - 16006555
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgac 215  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  16006517 aaggtgaataagtggggtgtctggggttcgaaccccgac 16006555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 21248983 - 21249048
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||||||||||||||||||||||||   ||||| |||||||| ||||| ||||    
T  21248983 ctagaattcacctttttcaaggtgaataagtggggtgttcagggttcgaaccccggcccctgcata 21249048  T

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Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 22432916 - 22432969
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||| |||||||||||| ||||| ||||||||||||||| ||||| ||||    
T  22432916 tttttcaaagtgaataagtggagtgtccggggtttgaaccccggcccctgcata 22432969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 24130649 - 24130596
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||||||||| ||||||  ||||||| ||||| ||||    
T  24130649 tttttcaaggtgaataagtggggtgtccggggttcaaaccccgtcccctgcata 24130596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 24160521 - 24160586
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||| || |||||||||||| ||||| |||||| |||||||||||||| ||||    
T  24160521 ctagaattcaactttttgaaagtgaataagtggagtgtccggggttcgaaccccgacccctgcata 24160586  T

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Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 31108765 - 31108806
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    |||||||||||||||||||||||||||| ||||| |||||||    
T  31108765 tttttcaaggtgaataagtggggtgtctcgggttcgaacccc 31108806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 42935522 - 42935477
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtt 204  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||    
T  42935522 ctagaattctcatttttcaaggagaataagtggggtgtctggggtt 42935477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 166872 - 166824
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataa 225  Q
    |||||||||||||| ||||||||||||| |||||||| ||||| |||||    
T  166872 aaggtgaataagtgaggtgtctggggttcgaaccccggcccctgcataa 166824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 17000017 - 16999946
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgtctctgc 241  Q
    |||||||| |||||| ||||||||||||| ||| |||| ||| |||||||  ||||||||||||||| ||||    
T  17000017 ttttcaagatgaatatgtggggtgtctggagttcgaactccggcccctacatataataatgcatgtccctgc 16999946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 24559470 - 24559426
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||    
T  24559470 gtgaataagtggggtgtccggggttcgaaccccgacccctgcata 24559426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 33533304 - 33533221
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgtctctgc 241  Q
    |||||||||  ||||| |||||||||||||||| |||||  |||| ||||||| ||| ||||  |||| |||||||||||||||    
T  33533304 tagaattcactttttttaaggtgaataagtgggatgtctatggttcgaaccccaaccactacatataacaatgcatgtctctgc 33533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 36331740 - 36331784
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||    
T  36331740 gtgaataagtggggtgtccggggttcgaaccccgacccctgcata 36331784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 45431711 - 45431663
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataa 225  Q
    ||||||||||||||||||||| |||||| |||||| ||||||| |||||    
T  45431711 aaggtgaataagtggggtgtccggggttcgaaccctgacccctgcataa 45431663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 49146165 - 49146121
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||    
T  49146165 gtgaataagtggggtgtccggggttcgaaccccgacccctgcata 49146121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 49639113 - 49639065
Alignment:
Q  176 caaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||  |||||| |||||||| ||||||||||    
T  49639113 caaggtgaataagtggggtgttcggggttcgaaccccggcccctacata 49639065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 55318107 - 55318055
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacat 223  Q
    |||||||| |||||||||||||||||| |||||| ||| ||| ||||||||||    
T  55318107 tttttcaaagtgaataagtggggtgtccggggttcgaatcccaacccctacat 55318055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 13539975 - 13540022
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||| ||||||||||||||| |||||| ||||||| |||||||||||    
T  13539975 aaggtaaataagtggggtgtccggggttcgaaccccaacccctacata 13540022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 13874845 - 13874892
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||| |||| |||||||| ||||||||||||||||| ||||    
T  13874845 aaggtgaataaatgggatgtctgggatttgaaccccgacccctgcata 13874892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 19137723 - 19137656
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||   |||||||||| |||||| |||||||||||||||| ||||| || ||||| ||||    
T  19137723 gactagaattctcttttttcaaggagaataaatggggtgtctggggttcgaacctcggcccctgcata 19137656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 24537911 - 24537864
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  24537911 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 24537864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 27066694 - 27066647
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||| ||||||| ||||    
T  27066694 aaggtgaataagtggggtgtccggggttcgaaccctgacccctgcata 27066647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 32508805 - 32508852
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||  |||||| |||||||||||||| ||||    
T  32508805 aaggtgaataagtggggtgttcggggttcgaaccccgacccctgcata 32508852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 115
Target Start/End: Complemental strand, 33464912 - 33464877
Alignment:
Q  80 ctattcaattataatttgactcaaattaatttactt 115  Q
    ||||||||||||||||| ||||||||||||||||||    
T  33464912 ctattcaattataatttaactcaaattaatttactt 33464877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 35483353 - 35483306
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| ||| || |||||||||||||| ||||    
T  35483353 aaggtgaataagtggggtgtccgggattcgaaccccgacccctgcata 35483306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 36842263 - 36842204
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    |||||||||  |||||||| ||||||||||||| |||  |||||| ||||||||||||||    
T  36842263 tagaattcacttttttcaaagtgaataagtgggatgtacggggttcgaaccccgacccct 36842204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 46328935 - 46328982
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  46328935 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 46328982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 48347287 - 48347330
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||    
T  48347287 tgaataagtggggtgtctgaggttcgaaccccgacccctgcata 48347330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 49019267 - 49019220
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||| |||||||| | || |||||||||||||||||||    
T  49019267 aaggtgaataagtgcggtgtctgagattcgaaccccgacccctacata 49019220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 50676878 - 50676925
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||  |||||| ||||||| |||||||||||    
T  50676878 aaggtgaataagtggggtgttcggggttcgaaccccaacccctacata 50676925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 54983716 - 54983763
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||| ||||||||| |||||| |||||||||||||| ||||    
T  54983716 aaggtgaataaatggggtgtccggggttcgaaccccgacccctgcata 54983763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 7020857 - 7020792
Alignment:
Q  178 aggtgaataagtggggtgtctggggtttgaaccccgaccc--ctacataataatgcatgtctctgc 241  Q
    |||||||||||| ||||| | |||||| ||||||||||||   || ||||||||||||||||||||    
T  7020857 aggtgaataagttgggtgaccggggttcgaaccccgacccatgtatataataatgcatgtctctgc 7020792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 7938288 - 7938326
Alignment:
Q  186 aagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  7938288 aagtggagtgtctggggttcgaaccccgacccctacata 7938326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 17262320 - 17262270
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacc 210  Q
    |||||||||  ||||||||||||||||||||||||||| ||| || |||||    
T  17262320 tagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaacc 17262270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 32665363 - 32665325
Alignment:
Q  179 ggtgaataagtggggtgtctggggtttgaaccccgaccc 217  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  32665363 ggtgaataagtggggtgtccggagtttgaaccccgaccc 32665325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 49299233 - 49299275
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggg 201  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||    
T  49299233 ctagaattcagctttctcaaggtgaataagtggagtgtctggg 49299275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 51801523 - 51801429
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||| ||| ||||||| |||||||||||||||||| | |||  ||||||| || || ||||| |||  ||||||||||| |||||| |||||||    
T  51801523 aaattactcaatcttagatcaattttgttttatttgttattaattgtacattctgcatttttacattccaatttatagccatattcatttataat 51801429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 2903798 - 2903757
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||||||||||| |||| || ||||||||||||||    
T  2903798 tttttcaaggtgaataagttgggtatccggggtttgaacccc 2903757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 10124955 - 10125036
Alignment:
Q  14 ttagctcaattttgttttatttgctgttacatgtacatcct-acattttatattttaatttatagccctattcaattataat 94  Q
    |||| |||||||| ||||||||||| |||  |||||||||| |  |||||||||  |||||||| || ||||||||||||||    
T  10124955 ttagatcaattttattttatttgctattagttgtacatcctgaatttttatattccaatttataaccatattcaattataat 10125036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 31419667 - 31419622
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctaca 222  Q
    |||||||||||||||||||| ||||||| |||||||  ||||||||    
T  31419667 aaggtgaataagtggggtgtttggggttcgaaccccagcccctaca 31419622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 38176138 - 38176097
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccc 218  Q
    |||||||||||||||| ||||||||||| |||||||| ||||    
T  38176138 aaggtgaataagtgggctgtctggggttcgaaccccggcccc 38176097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 40160837 - 40160792
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtt 204  Q
    ||||||||||  ||||| ||||||||||||||||||||| ||||||    
T  40160837 ctagaattcacctttttaaaggtgaataagtggggtgtccggggtt 40160792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 47497168 - 47497135
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtt 204  Q
    ||||| ||||||||||||||||||||||||||||    
T  47497168 ttttttaaggtgaataagtggggtgtctggggtt 47497135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 4045628 - 4045692
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||  ||||||||| ||||||||||||||||| |  ||| ||||| |||||||| ||||    
T  4045628 tagaattcacctttttcaagatgaataagtggggtgtccgaagttcgaacctcgacccctgcata 4045692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 4478372 - 4478439
Alignment:
Q  170 atttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgt 235  Q
    |||||| ||| |||||||||||| |||| ||| || ||||||||||||||  | ||||||||||||||    
T  4478372 atttttaaagatgaataagtgggatgtccgggattcgaaccccgacccctgcatataataatgcatgt 4478439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 6284951 - 6284919
Alignment:
Q  187 agtggggtgtctggggtttgaaccccgacccct 219  Q
    |||||||||||||||||| ||||||||||||||    
T  6284951 agtggggtgtctggggttcgaaccccgacccct 6284919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 9625064 - 9625020
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  9625064 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 9625020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 10959214 - 10959174
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgaccccta 220  Q
    |||||||||||||||||| |||||| |||||||| ||||||    
T  10959214 gtgaataagtggggtgtccggggttcgaaccccggccccta 10959174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 11668276 - 11668316
Alignment:
Q  173 tttcaaggtgaataagtggggtgtctggggtttgaaccccg 213  Q
    ||||||||||||||||||||||||| | |||| ||||||||    
T  11668276 tttcaaggtgaataagtggggtgtccgtggttcgaaccccg 11668316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 19149514 - 19149443
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgtctctg 240  Q
    |||||||| || ||||| ||| ||||||||||||  ||||| || ||||||  |||||||||||||||||||    
T  19149514 tttttcaaagtaaataaatggagtgtctggggttcaaaccctgaaccctacatataataatgcatgtctctg 19149443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 23025998 - 23025954
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtt 204  Q
    |||||||||  ||||| || |||||||||||||||||||||||||    
T  23025998 tagaattcaccttttttaaagtgaataagtggggtgtctggggtt 23025954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 27183695 - 27183739
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  27183695 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 27183739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 37756424 - 37756472
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataa 225  Q
    |||||||||||||||||||| ||||||| |||||||  ||||| |||||    
T  37756424 aaggtgaataagtggggtgtttggggttcgaaccccagcccctgcataa 37756472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 41121956 - 41121916
Alignment:
Q  177 aaggtgaataa-gtggggtgtctggggtttgaaccccgacc 216  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  41121956 aaggtgaataaagtggggtgtccggggtttgaaccccgacc 41121916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 50724456 - 50724404
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| ||||||||||||||||||||| | |||| ||||||| |||||| ||||    
T  50724456 tttttaaggtgaataagtggggtgtccgaggttcgaaccccaacccctgcata 50724404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 50788392 - 50788444
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| ||||||||||||||||||||| | |||| ||||||| |||||| ||||    
T  50788392 tttttaaggtgaataagtggggtgtccgaggttcgaaccccaacccctgcata 50788444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 241
Target Start/End: Original strand, 28283795 - 28284027
Alignment:
Q  9 ccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgactcaaattaa 108  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||| |||||||||||  |||||||||| ||| ||||||||||||||| |||||||||    
T  28283795 ccatcttagatcaattttattttatttgttgttacatgtacatcctgcattttatattccaatttatagctctactcaattataatttgattcaaattaa 28283894  T
Q  109 tttacttgtaaatacattannnnnnnnnnnnnngtcagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaa 208  Q
    |||||||||||||||||||              |||||||||| ||| ||||| |||| ||||||||||||||||||||||||   ||||||||||||||    
T  28283895 tttacttgtaaatacattatttttgatttttttgtcagattgcctactgactataatttagatttttcaaggtgaataagtggaaagtctggggtttgaa 28283994  T
Q  209 ccccgacccctacataataatgcatgtctctgc 241  Q
    ||||||||| |||||||||||||||||||||||    
T  28283995 ccccgacccttacataataatgcatgtctctgc 28284027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 33659986 - 33659860
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| | ||||||| |||||||||||||||||| ||||||||||||| ||| |||||||||||  |||||||| ||||| ||||||||||||||| |    
T  33659986 aaattgcccaatcttagatcaattttgttttatttgttgttacatgtacaccctgcattttatattccaatttataaccctactcaattataatttgatt 33659887  T
Q  101 caaattaatttacttgtaaatacatta 127  Q
    |||||||||||||||||||||||||||    
T  33659886 caaattaatttacttgtaaatacatta 33659860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 37335103 - 37334970
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattata-------a 93  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||| |||||| | ||||||||||| |||||||||||||||||||||||||       |    
T  37335103 aaattgctccatcttagatcaattttgttttatttgctactacatatacatcatgcattttatattctaatttatagccctattcaattataatttcaaa 37335004  T
Q  94 tttgactcaaattaatttacttgtaaatacatta 127  Q
    |||||||||||||||||||||||| |||||||||    
T  37335003 tttgactcaaattaatttacttgtgaatacatta 37334970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 50615093 - 50615207
Alignment:
Q  7 ctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgactcaaatt 106  Q
    ||||||||||  |||| |||||||||||||||  |||||||||| | ||||||||||||| ||||||| ||  ||| |||||||||||||||||||||||    
T  50615093 ctccatcttatatcaactttgttttatttgctactacatgtacaccttacattttatattctaatttagag--ctactcaattataatttgactcaaatt 50615190  T
Q  107 aatttacttgtaaatac 123  Q
    ||||||||||| |||||    
T  50615191 aatttacttgtgaatac 50615207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 123
Target Start/End: Original strand, 50622921 - 50623035
Alignment:
Q  7 ctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgactcaaatt 106  Q
    ||||||||||  |||| |||||||||||||||  |||||||||| | ||||||||||||| ||||||| ||  ||| |||||||||||||||||||||||    
T  50622921 ctccatcttatatcaactttgttttatttgctactacatgtacaccttacattttatattctaatttagag--ctactcaattataatttgactcaaatt 50623018  T
Q  107 aatttacttgtaaatac 123  Q
    ||||||||||| |||||    
T  50623019 aatttacttgtgaatac 50623035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 16182910 - 16182827
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgtctctgc 241  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||  |||||||  ||||||||||||||||||||    
T  16182910 tagaattcatatttttcaagatgaataagtggggtgtccggggtttgaaccccagcccctacatataataatgcatgtctctgc 16182827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 9768802 - 9768867
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  9768802 ctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcata 9768867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 48260182 - 48260247
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| |||| |||||||| |||||    
T  48260182 ctagaattcacatttttcaaggtgaataagtggggtgtccggggttcgaactccgaccccgacata 48260247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 2643809 - 2643892
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||  ||||||||||| |  | ||||||||||||||||||||    
T  2643809 tagagttcacattttttaaggtgaataagtggggtgtctggggttcaaaccccgacccatgcatataataatgcatgtctctgc 2643892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 9769574 - 9769657
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgtctctgc 241  Q
    |||||||||  ||||||||||||||||||||||||||| |||||| ||||||| | ||||||  ||||||||||||||| ||||    
T  9769574 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccaatccctacatataataatgcatgtccctgc 9769657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26244506 - 26244444
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttat 63  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||    
T  26244506 aaattgccccatcttagatcaattttgttttatttgttgttacatgtacaccctgcattttat 26244444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 3341729 - 3341813
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||| || ||||| |||||  | ||||||||||||||| ||||    
T  3341729 ctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgatccccggcccctgcatataataatgcatgtccctgc 3341813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 41677162 - 41677078
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccc--tacataataatgcatgtctctgc 241  Q
    ||||||||||  ||||||||||||||||||||||||||| || ||| |||||||||||||   | ||||||||| ||||||||||    
T  41677162 ctagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatgaatgtctctgc 41677078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 43020713 - 43020629
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    |||||||||| |||||||||||||||| ||||||||||| | |||| ||||||| ||||||  | ||||||||||||||| ||||    
T  43020713 ctagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaaccccaacccctgcatataataatgcatgtccctgc 43020629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 11238021 - 11238100
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtc 236  Q
    ||||||||||  ||||||||| ||||||||||||||||| ||| || ||||||||||||||  | |||||||||||||||    
T  11238021 ctagaattcacctttttcaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcatgtc 11238100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 15774323 - 15774370
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  15774323 aaggtgaataagtggggtgtccggggttcgaaccccgacccctacata 15774370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 24168584 - 24168650
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgt 235  Q
    ||||| |||||||||||||||||||||||||||| ||||||||  ||||||  ||||||||||||||    
T  24168584 ttttttaaggtgaataagtggggtgtctggggttcgaaccccggtccctacatataataatgcatgt 24168650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 49251406 - 49251453
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  49251406 aaggtgaataagtggggtgtctggggttcgaaccccgacccctgcata 49251453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 27654998 - 27655043
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtt 204  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||    
T  27654998 ctagaattcacctttttcaaggtgaataagtggggtgtctggggtt 27655043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 38028638 - 38028589
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaac 209  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||| ||||    
T  38028638 tagaattcacatttttcaaggtgaataagtggggtgtctagggttcgaac 38028589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 50199481 - 50199534
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  50199481 tttttcaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 50199534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 1576115 - 1576179
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||  ||||||||||| ||||||||||||||| |||||||||| |||| ||||| ||||    
T  1576115 tagaattcacttttttcaaggtaaataagtggggtgtccggggtttgaatcccggcccctgcata 1576179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 195145 - 195102
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggt 203  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  195145 tagaattcacctttttcaaggtgaataagtggggtgtctggggt 195102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 4616957 - 4616910
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  4616957 aaggtgaataagtggggtgtctgtggttcgaaccgcgacccctacata 4616910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 11405540 - 11405493
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  11405540 aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcata 11405493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 19424130 - 19424083
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  19424130 aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcata 19424083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 26349970 - 26350055
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    ||||| |||||| |||||| |||||||||||||||||||| ||||||| ||| ||| ||||||  | |||||||| |||||||||||    
T  26349970 gactaaaattcatattttttaaggtgaataagtggggtgtttggggttcgaa-cccaacccctgcatataataatacatgtctctgc 26350055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 9976377 - 9976431
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccg 213  Q
    ||||||||||  ||||||||||||||||||||||||||| || ||| ||||||||    
T  9976377 ctagaattcacttttttcaaggtgaataagtggggtgtccggagttcgaaccccg 9976431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 12148588 - 12148626
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  12148588 tgaataagtggggtgtctggggtttgaactccgacccct 12148626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 2903032 - 2903077
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||    
T  2903032 tttttcaaggtgaataagtggggtgttcggggttcgaaccccgacc 2903077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 10123068 - 10123109
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctaca 222  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  10123068 tgaataagtggggtgtttggggttcgaaccccgacccctaca 10123109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 12553296 - 12553243
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||  |||||||| |||||||||||||||||| |||||| |||||||    
T  12553296 ctagaattcacctttttcaaagtgaataagtggggtgtccggggttcgaacccc 12553243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 23750251 - 23750194
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgaccc 217  Q
    |||||||||  ||||||||| ||||||||||||||||   ||||||||||||||||||    
T  23750251 tagaattcacctttttcaagatgaataagtggggtgttcagggtttgaaccccgaccc 23750194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 25421938 - 25421893
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctaca 222  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||    
T  25421938 aaggtgaataagtggagtgtctggggtttgaaccccagcccctaca 25421893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 3797944 - 3797892
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| |||||||||||||||||||||| ||||| |||||||  ||||||||||    
T  3797944 tttttaaggtgaataagtggggtgtctagggttcgaaccccagcccctacata 3797892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 29491551 - 29491507
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||    
T  29491551 gtgaataagtggggtgtccggggttcgaaccccgacccctgcata 29491507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 32635224 - 32635168
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata-ataatgca 232  Q
    ||||||||||||||||||||| |||||| ||||||| |||||| |||| ||||||||    
T  32635224 aaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatatataatgca 32635168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 32711155 - 32711191
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccg 213  Q
    |||||||||||||||||||||||||||| ||||||||    
T  32711155 aaggtgaataagtggggtgtctggggttcgaaccccg 32711191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 41182863 - 41182811
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||| |||||||||||||||||| ||||||  ||||||||||||| ||||    
T  41182863 ttttcaaagtgaataagtggggtgtccggggttcaaaccccgacccctgcata 41182811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 749598 - 749644
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||||||    
T  749598 aaggtgaataagtggggtgtc-ggggttcgaaccccaacccctacata 749644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 3532985 - 3533031
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  3532985 aaggtgaataagtggggtgtccggggttggaa-cccgacccctacata 3533031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 17056891 - 17056938
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||| |||||||||| |||||||| ||||| ||||    
T  17056891 aaggtgaataagtggggcgtctggggttcgaaccccggcccctgcata 17056938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 21884659 - 21884612
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| ||||| || ||||| ||||    
T  21884659 aaggtgaataagtggggtgtctggggttcgaacctcggcccctgcata 21884612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 22779312 - 22779269
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgac 215  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||    
T  22779312 ttttaaaggtgaataagtggggtgtttggggttcgaaccccgac 22779269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 30649177 - 30649142
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    |||||||||||||||||||||||||||| |||||||    
T  30649177 aaggtgaataagtggggtgtctggggttcgaacccc 30649142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 33844707 - 33844664
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccga 214  Q
    |||||||| |||||||||||||||||| |||||| |||||||||    
T  33844707 tttttcaaagtgaataagtggggtgtccggggttcgaaccccga 33844664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 33949271 - 33949314
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccga 214  Q
    |||||||| |||||||||||||||||| |||||| |||||||||    
T  33949271 tttttcaaagtgaataagtggggtgtccggggttcgaaccccga 33949314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 38851719 - 38851672
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||| ||||| |||||||||| ||||||||||||| ||||||||    
T  38851719 aaggtgaacaagtgaggtgtctgggatttgaaccccgacacctacata 38851672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 42832031 - 42831996
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||||||||||||| ||||||||||||||    
T  42832031 aaggtgaataagtggggtgtccggggtttgaacccc 42831996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 50859378 - 50859425
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||| |||||||||| ||||||||||||||| ||||| ||||    
T  50859378 aaggtgaatatgtggggtgtccggggtttgaaccccggcccctgcata 50859425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 8893940 - 8893902
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  8893940 tgaataagtggggtgtttggggttcgaaccccgacccct 8893902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 23973475 - 23973533
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgaccc 217  Q
    |||||||||| ||||||||| |||||||||||||||||  |||||| ||| ||| ||||    
T  23973475 ctagaattcacatttttcaacgtgaataagtggggtgtacggggttcgaatcccaaccc 23973533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 49620052 - 49620014
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  49620052 tgaataagtggggtgtccggggtctgaaccccgacccct 49620014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 1721242 - 1721177
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||| |||||||||||||| |||||| |||||| ||| |||| ||||| ||||    
T  1721242 ctagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaaacccggcccctgcata 1721177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 4288690 - 4288625
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||| ||||||||||| || ||||||||||||| |||| | ||||||| ||||    
T  4288690 ctagaattcatcttttttaaggtgaataaatgaggtgtctggggttcgaactctgacccctgcata 4288625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4426273 - 4426310
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgct 38  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  4426273 aaattactccatcttagatcaattttgttttatttgct 4426310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 7438701 - 7438660
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctaca 222  Q
    ||||||||||||||||| || ||| |||||||||||||||||    
T  7438701 tgaataagtggggtgtccggagttcgaaccccgacccctaca 7438660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 18003918 - 18003853
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  |||||| |||||||||||||||||||  |||| | |||||||| ||||| ||||    
T  18003918 ctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcata 18003853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 19866577 - 19866512
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||| ||||||||||||||||||||| || |||| |||  || ||||||||||    
T  19866577 ctagaattcaccttttttaaggtgaataagtggggtgtccggagtttaaacttcggcccctacata 19866512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 30049873 - 30049832
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    |||||||||||||||||| ||| |||||| ||||||||||||    
T  30049873 tttttcaaggtgaataagagggatgtctgaggtttgaacccc 30049832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 2208652 - 2208696
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||| ||||||||||||||||| || ||||| ||||    
T  2208652 gtgaataagtgggatgtctggggtttgaacctcgtcccctgcata 2208696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 3261959 - 3261915
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtt 204  Q
    ||||||||| ||||||||||||||||||||||  |||||| ||||    
T  3261959 tagaattcacatttttcaaggtgaataagtggaatgtctgaggtt 3261915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 3672568 - 3672604
Alignment:
Q  2 aattgctccatcttagctcaattttgttttatttgct 38  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  3672568 aattgctccctcttagatcaattttgttttatttgct 3672604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 17350142 - 17350098
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  17350142 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 17350098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 21635635 - 21635603
Alignment:
Q  183 aataagtggggtgtctggggtttgaaccccgac 215  Q
    ||||| |||||||||||||||||||||||||||    
T  21635635 aataactggggtgtctggggtttgaaccccgac 21635603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 25800348 - 25800392
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctacataa 225  Q
    ||||||||||||||||| |||||| ||||||||  ||||||||||    
T  25800348 tgaataagtggggtgtccggggttggaaccccggaccctacataa 25800392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 28284627 - 28284591
Alignment:
Q  2 aattgctccatcttagctcaattttgttttatttgct 38  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  28284627 aattgccccatcttagatcaattttgttttatttgct 28284591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 32660914 - 32660858
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata-ataatgca 232  Q
    |||||||| |||||||||||| ||||||||||||||  ||||| |||| ||||||||    
T  32660914 aaggtgaaaaagtggggtgtccggggtttgaaccccagcccctgcatatataatgca 32660858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 37262111 - 37262151
Alignment:
Q  170 atttttcaaggtgaataagtggggtgtctggggtttgaacc 210  Q
    |||||| |||||||||||||||||| || ||||||||||||    
T  37262111 attttttaaggtgaataagtggggtatccggggtttgaacc 37262151  T

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Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 37733839 - 37733803
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccg 213  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  37733839 aaggtgaataagtggggtgtccggggttcgaaccccg 37733803  T

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Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Original strand, 38019958 - 38019986
Alignment:
Q  177 aaggtgaataagtggggtgtctggggttt 205  Q
    |||||||||||||||||||||||||||||    
T  38019958 aaggtgaataagtggggtgtctggggttt 38019986  T

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Target: chr2 (Bit Score: 121; Significance: 4e-62; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 38825999 - 38825769
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    |||||||| |||||||| | |||||||||||||||| ||||||||||||| ||| |||||||||||| |||||||||| ||| |||||||||||||||||    
T  38825999 aaattgcttcatcttagataaattttgttttatttgatgttacatgtacaccctgcattttatatttcaatttatagctctactcaattataatttgact 38825900  T
Q  101 caaattaatttacttgtaaatacatta-nnnnnnnnnnnnnngtcagattgcataccgactagaattcagatttttcaaggtg-aataagtggggtgtct 198  Q
    |||||||||||||||||||||||||||               |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  38825899 caaattaatttacttgtaaatacattattttttatatttttagtcagattgcatactgactagaattcagatttttcaaggtgaaataagtggggtgtct 38825800  T
Q  199 ggggtttgaaccccgacccctacataataat 229  Q
    ||||||| ||||||| ||||||||| |||||    
T  38825799 ggggtttaaaccccggcccctacatgataat 38825769  T

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Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40133775 - 40133658
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| ||||||||  |||||||||||||||||||||||| ||||||| ||| |||||||||||  |||||||||||||| ||||||||||||||| |    
T  40133775 aaattgccccatcttaaatcaattttgttttatttgctgttagatgtacaccctgcattttatattccaatttatagccctactcaattataatttgatt 40133676  T
Q  101 caaattaatttacttgta 118  Q
    |||||||||||| |||||    
T  40133675 caaattaatttatttgta 40133658  T

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Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 40133598 - 40133507
Alignment:
Q  142 gtcagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    |||||||||| ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | || |||||||| |||||    
T  40133598 gtcagattgcctactgactagaattaagatttttcaaagtgaataagtggggtgtctggggtttgaaccccggctcccacataatagtgcat 40133507  T

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Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 2285643 - 2285557
Alignment:
Q  9 ccatcttagctcaattttgttttatttgctgttacatgtacatcctac-attttatattttaatttatagccctattcaattataat 94  Q
    ||||||||  |||||||||||||||||||| |||  |||||||||||| ||||||||||| |||||||||| ||||| |||||||||    
T  2285643 ccatcttaaatcaattttgttttatttgctattagttgtacatcctacaattttatatttcaatttatagctctatttaattataat 2285557  T

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Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 37912516 - 37912466
Alignment:
Q  174 ttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37912516 ttcaaggtgaataagtggggtgtccggggtttgaaccccgacccctacata 37912466  T

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Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 22014646 - 22014710
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||||| | |||||||||||    
T  22014646 tagaattcacatttttcaaggtaaataagtggggtgtctggggttcgaacctcaacccctacata 22014710  T

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Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 18089833 - 18089747
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata--ataatgcatgtctctgc 241  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||| |||| | | ||||| ||||  |||||||||||||||||    
T  18089833 gactagaattcacgtttttcaaggtgaataagtgaggtgtctggggttcgaactctggcccctgcatagtataatgcatgtctctgc 18089747  T

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Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 35352395 - 35352442
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtt 204  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  35352395 gactagaattcacatttttcaaggtgaataagtggggtgtctggggtt 35352442  T

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Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1156159 - 1156253
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatccta-cattttatattttaatttatagccctattcaattataat 94  Q
    |||||| |||||||||  |||||||||||||||||||| |||  ||||||| |||  ||||||||||| |||||||||| ||||| |||||||||    
T  1156159 aaattgttccatcttaaatcaattttgttttatttgctattaattgtacattctataattttatatttcaatttatagctctatttaattataat 1156253  T

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Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 1244671 - 1244606
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||    
T  1244671 ctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcata 1244606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 34107376 - 34107311
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||||| | |||||| ||||    
T  34107376 ctagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacctcaacccctgcata 34107311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 32288466 - 32288395
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgtctctg 240  Q
    ||||||||||||||||||||||||||| | |||| ||||||||| ||||||  |||||||||||||| ||||    
T  32288466 tttttcaaggtgaataagtggggtgtccgaggttcgaaccccgatccctacatataataatgcatgtttctg 32288395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 10262823 - 10262776
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  10262823 aaggtgaataagtggggtgtctggggttcgaaccccgacccctgcata 10262776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 20942100 - 20942167
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||| |||| ||  ||||||||||    
T  20942100 gactagaattcacttttttcaaggtgaataagtgaggtgtctggggttcgaactccatcccctacata 20942167  T

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Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 2283731 - 2283772
Alignment:
Q  81 tattcaattataatttgactcaaattaatttacttgtaaata 122  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  2283731 tattcaattataatttgactcaaattaatttacttataaata 2283772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 36520793 - 36520838
Alignment:
Q  179 ggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||    
T  36520793 ggtgaataagtggggtgtccggggttcgaaccccgacccctacata 36520838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 12206600 - 12206540
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||||||||  |||||||||||||||||| |||||||  |||||| ||||||||||||||    
T  12206600 ctagaattcacctttttcaaggtgaataagcggggtgttcggggttcgaaccccgacccct 12206540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 44187785 - 44187741
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  44187785 gtgaataagtggggtgtctggggttcgaaccccgacccctgcata 44187741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 8234803 - 8234850
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  8234803 aaggtgaataagtggggtgtccggggttcgaaccccggcccctacata 8234850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 11133160 - 11133113
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  11133160 aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcata 11133113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 11837073 - 11837026
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||    
T  11837073 aaggtgaataagtgaggtgtccggggttcgaaccccgacccctacata 11837026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 10602108 - 10602023
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctg-gggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    ||||||||||  |||||||| |||||||||||||||||| | ||||| |||||||| |||||  | |||| |||||||||||||||    
T  10602108 ctagaattcatctttttcaaagtgaataagtggggtgtccgtgggttcgaaccccgtcccctgcatataacaatgcatgtctctgc 10602023  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40129198 - 40129292
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||||||||||||||| |||||||| ||||||||||| |||  ||| || |||  | |||||||||||||||| ||||| |||| | |||||||    
T  40129198 aaattgctccatcttagatcaattttcttttatttgctattagttgtccaccctgtatttttatattttaatttctagccatatttatttataat 40129292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 2304368 - 2304327
Alignment:
Q  183 aataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  2304368 aataagtggggtgtccggggttcgaaccccgacccctacata 2304327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 39334874 - 39334958
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccc--tacataataatgcatgtctctgc 241  Q
    ||||||||||  |||||||| ||||||||||||| ||||||| ||| |||||||  ||||  || ||||||||||||||| ||||    
T  39334874 ctagaattcacctttttcaaagtgaataagtgggatgtctggagttcgaaccccagcccctgtatataataatgcatgtccctgc 39334958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 4529768 - 4529839
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctg 240  Q
    |||||||| |||||||||||||||||  || ||| |||| |||||||||  | |||||||||||||||||||    
T  4529768 tttttcaaagtgaataagtggggtgttcggagttcgaactccgacccctgcatataataatgcatgtctctg 4529839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 22355185 - 22355106
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtc 236  Q
    ||||||||||  |||| ||||||||||||||||||||||||| ||| ||| | | ||||||  |||||| ||||||||||    
T  22355185 ctagaattcaccttttgcaaggtgaataagtggggtgtctggagttcgaaactcaacccctgcacataacaatgcatgtc 22355106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 23405288 - 23405236
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| |||||||||||||||||||||  ||||| |||||||||||||| ||||    
T  23405288 tttttaaggtgaataagtggggtgtccagggttcgaaccccgacccctgcata 23405236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 45314511 - 45314455
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    ||||||||| |||||||||| |||||||||||| ||||||  ||| |||||||||||    
T  45314511 tagaattcacatttttcaagatgaataagtgggatgtctgaagttcgaaccccgacc 45314455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 580794 - 580841
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  580794 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 580841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 112
Target Start/End: Complemental strand, 1156898 - 1156867
Alignment:
Q  81 tattcaattataatttgactcaaattaattta 112  Q
    ||||||||||||||||||||||||||||||||    
T  1156898 tattcaattataatttgactcaaattaattta 1156867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 2114446 - 2114493
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||| || |||||| |||||| |||||||||||||||||||    
T  2114446 aaggtgaataaatgaggtgtccggggttcgaaccccgacccctacata 2114493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 3037633 - 3037680
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  3037633 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 3037680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 3179408 - 3179361
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||||| |||| ||||| |||||||| ||||    
T  3179408 aaggtgaataagtggggtgtctgaggttcgaacctcgacccctgcata 3179361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 6952376 - 6952321
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||| ||||||  ||||| ||||||||||| |||||||||||||||| |||||||    
T  6952376 gactaaaattcaccttttttaaggtgaataaatggggtgtctggggttcgaacccc 6952321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 9796977 - 9796934
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||    
T  9796977 tgaataagtggggtgtccggggttcgaaccccgacccctgcata 9796934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 17154733 - 17154686
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  17154733 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 17154686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 19905666 - 19905724
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccc--tacataataatgcat 233  Q
    ||||||||||||| ||||||| |||||| |||||||||||||  || ||||||||||||    
T  19905666 aaggtgaataagtcgggtgtccggggttcgaaccccgacccctgtatataataatgcat 19905724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 25406655 - 25406721
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgaccc--ctacataataatgcatgt 235  Q
    |||| |||||||||||||||||||||| || ||| ||||||||||||   || ||||||||||||||    
T  25406655 ttttccaaggtgaataagtggggtgtccggagttcgaaccccgacccatatatataataatgcatgt 25406721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 29664683 - 29664640
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||    
T  29664683 tgaataagtggggtgtccgggatttgaaccccgacccctgcata 29664640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 30474206 - 30474253
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| ||||| || ||||| ||||    
T  30474206 aaggtgaataagtggggtgtctggggttcgaacctcggcccctgcata 30474253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 35694785 - 35694856
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata-ataatgcatgtctctgc 241  Q
    ||||| ||| ||||||| |||||||||||||||| |||||||| || ||||||| | |||||||||| ||||    
T  35694785 ttttttaagatgaataaatggggtgtctggggttcgaaccccggcctctacatataaaatgcatgtccctgc 35694856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 3487165 - 3487123
Alignment:
Q  182 gaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||  ||||||||||||||||| ||||||||||||||    
T  3487165 gaataagtgatgtgtctggggtttgaactccgacccctacata 3487123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 32256240 - 32256178
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||| ||||||  |||||||| ||||||||||||| |||| || ||| ||||||||||||||    
T  32256240 gactataattcaactttttcaatgtgaataagtgggatgtccggagttcgaaccccgacccct 32256178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 33587167 - 33587129
Alignment:
Q  186 aagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  33587167 aagtggggtgtccggggtttgaacctcgacccctacata 33587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 5807761 - 5807810
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaac 209  Q
    |||||||||  |||||||||||||||||||||| ||||| ||||| ||||    
T  5807761 tagaattcacctttttcaaggtgaataagtgggatgtctagggttcgaac 5807810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 6282336 - 6282283
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccg 213  Q
    ||||||||| ||||||||| ||||||||||| ||||| |||||||  |||||||    
T  6282336 tagaattcacatttttcaaagtgaataagtgaggtgtttggggttcaaaccccg 6282283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 14307687 - 14307752
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||| || |||||||||||||||||  |||||| ||||| |||||||| ||||    
T  14307687 ctagaattcactttttttaaagtgaataagtggggtgttcggggttcgaacctcgacccctgcata 14307752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 29713082 - 29713135
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||  ||||| ||||| ||||||| |||||||||||||| |||||||    
T  29713082 ctagaattcatcttttttaaggtaaataagtagggtgtctggggttcgaacccc 29713135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 29896155 - 29896192
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtc 197  Q
    |||||||||  |||||||||||||||||||||||||||    
T  29896155 tagaattcatctttttcaaggtgaataagtggggtgtc 29896192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 38807971 - 38807938
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtt 204  Q
    |||||||||||||||||||| |||||||||||||    
T  38807971 tttttcaaggtgaataagtgcggtgtctggggtt 38807938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 41699184 - 41699139
Alignment:
Q  179 ggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||  |||||| |||||||||||||| ||||    
T  41699184 ggtgaataagtggggtgttcggggttcgaaccccgacccctgcata 41699139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 44132568 - 44132640
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    ||||||||| |||||||  ||||||||||| ||| ||||||||||| ||  | |||| |||||||||||||||    
T  44132568 tttttcaagatgaataaacggggtgtctggagttcgaaccccgacctctgcatataacaatgcatgtctctgc 44132640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 45110199 - 45110252
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||| ||||||||| |||||||||| || |||| ||||||||||| |||||||    
T  45110199 ttttttaaggtgaattagtggggtgtttgaggttcgaaccccgaccgctacata 45110252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 5029094 - 5029130
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgt 196  Q
    |||||||||  ||||||||||||||||||||||||||    
T  5029094 tagaattcatctttttcaaggtgaataagtggggtgt 5029130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 17896919 - 17896883
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgt 196  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  17896919 tagaattcacattttttaaggtgaataagtggggtgt 17896883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 29035057 - 29035013
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  29035057 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 29035013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 30392818 - 30392862
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||| |||||| |||||||||||| |||||||||| ||||||||    
T  30392818 gtgaacaagtggagtgtctggggttcgaaccccgactcctacata 30392862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 30737085 - 30737045
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtc 197  Q
    |||||||||||| |||||| |||||||||||||||| ||||    
T  30737085 gactagaattcacattttttaaggtgaataagtgggatgtc 30737045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 32527091 - 32527135
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||| ||||||||||| |||||||| ||||| ||||    
T  32527091 gtgaataagtgggttgtctggggttcgaaccccggcccctgcata 32527135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 33613616 - 33613656
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgaccc 217  Q
    ||||||||||||||||||||| |||||| |||| |||||||    
T  33613616 aaggtgaataagtggggtgtccggggttcgaactccgaccc 33613656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 36190135 - 36190091
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||| |||| ||||| |||||| ||||||    
T  36190135 gtgaataagtggggtgtctgaggttcgaacctcgacccttacata 36190091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 41305062 - 41305110
Alignment:
Q  162 gaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacc 210  Q
    |||||||  |||||||||||||||||||||||| || || |||||||||    
T  41305062 gaattcacctttttcaaggtgaataagtggggtatccggagtttgaacc 41305110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 42541239 - 42541191
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataa 225  Q
    ||||||| |||||||||||||||||||| |||||||  ||||| |||||    
T  42541239 aaggtgagtaagtggggtgtctggggttcgaaccccagcccctgcataa 42541191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 47514463 - 47514229
Alignment:
Q  2 aattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgactc 101  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| | || |||||| |||||||||||    
T  47514463 aattgccccatcttagatcaattttgttttatttgctgttacatgtacaccctgcattttatattctaatttatagtcatactcaattgtaatttgactc 47514364  T
Q  102 aaattaatttacttgtaaatacatta-nnnnnnnnnnnnnngtcagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctgg 200  Q
    ||||||||||||||||||||||||||               |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||     
T  47514363 aaattaatttacttgtaaatacattatttttgattttttctgtcagattgcctactgactagaattcagatttttcaaggtgaataagtgaggtgtctga 47514264  T
Q  201 ggtttgaaccccgacccctacataataatgcatgt 235  Q
     |||||||||||| | ||||||||||| |||||||    
T  47514263 agtttgaaccccggctcctacataatagtgcatgt 47514229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 28870443 - 28870317
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||| |||||||||||  |||||||||  ||| |||||||||||||||||    
T  28870443 aaattgctccatcttagatcaattttgttttatttgttgttacatgtacaccctgcattttatattccaatttatagttctactcaattataatttgact 28870344  T
Q  101 caaattaatttacttgtaaatacatta 127  Q
    |||||||||||||||||||||||||||    
T  28870343 caaattaatttacttgtaaatacatta 28870317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 7475060 - 7475169
Alignment:
Q  9 ccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgactcaaattaa 108  Q
    ||||||||| | ||||||||||||||||||||||||| |||| | |  |||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  7475060 ccatcttagattaattttgttttatttgctgttacatatacaccatgtattttatattctaatttataaccctatttaattataatttgactcaaattaa 7475159  T
Q  109 tttacttgta 118  Q
    ||||||||||    
T  7475160 tttacttgta 7475169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 7475227 - 7475321
Alignment:
Q  142 gtcagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcatgtc 236  Q
    |||||||||| ||| |||||||||| ||||||||||  |||||||| ||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  7475227 gtcagattgcctactgactagaattaagatttttcagagtgaataaatggggtgtctggggtttgaaccccggctcctacataatagtgcatgtc 7475321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 16814798 - 16814721
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgt 235  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||    
T  16814798 tagaattcacatttttcaaagtgaataagtggagtgtctggggttcgaaccccgacccctacatataataatgcatgt 16814721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 26734264 - 26734323
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccc 218  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  26734264 ctagaattcacctttttcaaggtgaataagtggggtgtctagggtttgaaccccaacccc 26734323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47513570 - 47513664
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||||| ||||||||| |||||||||||||||||||| |||  ||| || |||||| ||||| |||| ||||||||||| |||| | |||||||    
T  47513570 aaattgccccatcttagatcaattttgttttatttgctattagttgtccaccctacatttttacatttcaatttatagccatatttatttataat 47513664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 11808140 - 11808075
Alignment:
Q  160 tagaattcagatttttc-aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||  |||||| ||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  11808140 tagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcata 11808075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 44409301 - 44409218
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgct 242  Q
    |||||||||  |||||||||||||||||||||||||| | ||||| |||||||||||| |  | ||||||||||||||| |||||    
T  44409301 tagaattcacctttttcaaggtgaataagtggggtgt-tcgggttcgaaccccgacccttgcatataataatgcatgtccctgct 44409218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 3955042 - 3955098
Alignment:
Q  163 aattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||| ||||||||||    
T  3955042 aattcacattttttaagatgaataagtggggtgtctggggttcgaatcccgacccct 3955098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 14818379 - 14818423
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  14818379 gtgaataagtggggtgtttggggtttgaaccccgacccctgcata 14818423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 15265377 - 15265421
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  15265377 gtgaataagtggggtgtttggggtttgaaccccgacccctgcata 15265421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 24579280 - 24579324
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtt 204  Q
    |||||||||  ||||||||||||||||||||||||||||||||||    
T  24579280 tagaattcacctttttcaaggtgaataagtggggtgtctggggtt 24579324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 37995550 - 37995622
Alignment:
Q  170 atttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata-ataatgcatgtctctgc 241  Q
    |||||| |||||||| ||||| |||||||||||||||||||||| ||||| |||| |  ||||||||||||||    
T  37995550 attttttaaggtgaacaagtgaggtgtctggggtttgaaccccggcccctgcatataacatgcatgtctctgc 37995622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 41417289 - 41417333
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  41417289 gtgaataagtggggtgtctggggttcgaaccccgacccctgcata 41417333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 924303 - 924350
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  924303 aaggcgaataagtggggtgtctggggttcgaaccccaacccctacata 924350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 35195947 - 35195861
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    |||||||| |||  ||||||||||||||||| ||||||||  |||||| |||||||| |||||  | ||||||||||||||| ||||    
T  35195947 gactagaagtcacctttttcaaggtgaataaatggggtgttcggggttcgaaccccggcccctgcatataataatgcatgtccctgc 35195861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 37917496 - 37917429
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||| ||||||  |||||||| ||||||||||||||||| | ||||||||||||| |||||| ||||    
T  37917496 gactataattcatttttttcaaagtgaataagtggggtgtttagggtttgaaccccaacccctgcata 37917429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 3392545 - 3392507
Alignment:
Q  186 aagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  3392545 aagtggggtgtctggggttcgaaccccgacccctacata 3392507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 37129370 - 37129412
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  37129370 aaggtgaataagtggggtgtccgaggtttgaaccccgacccct 37129412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 23685567 - 23685612
Alignment:
Q  179 ggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  23685567 ggtgaataagtggggtgtctggggttcgaaccccggcccctgcata 23685612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 28869863 - 28869961
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgct----gttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||||| ||||||||| ||||||||||||||||||||    ||||  |||||||| | || |||||||||  ||||||||||| |||||| |||||||    
T  28869863 aaattgccccatcttagatcaattttgttttatttgctattagttaattgtacatcttgcatttttatattccaatttatagccatattcatttataat 28869961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 32309141 - 32309206
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||| |||||| ||||||||||| ||||||||||| | || |||| ||||||||| ||||    
T  32309141 ctagaattcacattttttaaggtgaataactggggtgtctgagattcgaactccgacccctgcata 32309206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 2567826 - 2567890
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||  ||||||||||| ||||||||||||| | |||||| |||||||| ||||| ||||    
T  2567826 tagaattcacctttttcaaggttaataagtggggtgaccggggttcgaaccccggcccctgcata 2567890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 5773221 - 5773166
Alignment:
Q  171 tttttcaaggtgaataagtggg--gtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||||  ||||| |||||| ||||| |||||||||||||    
T  5773221 tttttcaaggtgaataagtgggatgtgtccggggttcgaacctcgacccctacata 5773166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 14707376 - 14707320
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    ||||||||||||||||||||| |||||| ||||||| |||||| ||||  |||||||    
T  14707376 aaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatataaatgcat 14707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 20529980 - 20529924
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    ||||||||||||||||||||| |||| ||||||||||| |||| ||||  |||||||    
T  20529980 aaggtgaataagtggggtgtccggggcttgaaccccgatccctgcatacaaatgcat 20529924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 2366441 - 2366394
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||| | ||| |||||||||||||| ||||    
T  2366441 aaggtgaataagtggggtgtctagagttcgaaccccgacccctgcata 2366394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 7465542 - 7465484
Alignment:
Q  185 taagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    ||||||||||||| |||||| |||||||| |||||  | ||||||||||||||||||||    
T  7465542 taagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatgtctctgc 7465484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 21285364 - 21285411
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  21285364 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 21285411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 22660825 - 22660778
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||| |||||||||||||| ||||||| |||||||| ||||||||||    
T  22660825 aaggtaaataagtggggtgtttggggttcgaaccccggcccctacata 22660778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 22965969 - 22966016
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| ||||| || ||||| ||||    
T  22965969 aaggtgaataagtggggtgtctggggttcgaacctcggcccctgcata 22966016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 29658283 - 29658330
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  29658283 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 29658330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 30152825 - 30152782
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgaccccta 220  Q
    ||||||||||||||||||||  |||||| |||||||||||||||    
T  30152825 aaggtgaataagtggggtgttcggggttcgaaccccgaccccta 30152782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 30644253 - 30644206
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| |||| ||| ||||| ||||    
T  30644253 aaggtgaataagtggggtgtctggggttcgaacaccggcccctgcata 30644206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 37665828 - 37665781
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| |||||||||||||||| ||||||||||||||| ||||| ||||    
T  37665828 aaggcgaataagtggggtgtccggggtttgaaccccggcccctgcata 37665781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 43635672 - 43635633
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  43635672 aaggtgaataagtggggtgtccggggttcgaaccccgacc 43635633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 48175056 - 48174990
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccc--tacataataatgcatgtc 236  Q
    ||||||||| |||||||||||||||| |||||| |||| ||| ||||  || |||||||||||||||    
T  48175056 ttttcaaggggaataagtggggtgtccggggttcgaacaccggcccctgtatataataatgcatgtc 48174990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 1649254 - 1649188
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataa 225  Q
    ||||||||||   ||||||||||||||||||||||||||  ||||| |||||| | ||||| |||||    
T  1649254 ctagaattcaccattttcaaggtgaataagtggggtgtccagggttcgaaccctggcccctgcataa 1649188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 9498044 - 9498006
Alignment:
Q  186 aagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  9498044 aagtggggtgtccggggttcgaaccccgacccctacata 9498006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 15025240 - 15025198
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||||||||||||||||||  ||||||||||||||| |||||    
T  15025240 aaggtgaataagtggggtgttcggggtttgaaccccggcccct 15025198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 24188548 - 24188510
Alignment:
Q  186 aagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  24188548 aagtggggtgtctggggttcgaaccccgacccctgcata 24188510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 31793548 - 31793510
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  31793548 tgaataagtggggtgtccggggttcgaaccccgacccct 31793510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 48433725 - 48433763
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  48433725 tgaataagtggggtgtccggggtttgaaccccggcccct 48433763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 7392303 - 7392336
Alignment:
Q  163 aattcagatttttcaaggtgaataagtggggtgt 196  Q
    |||||| |||||||||||||||||||||||||||    
T  7392303 aattcatatttttcaaggtgaataagtggggtgt 7392336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 8903786 - 8903843
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccga 214  Q
    ||||||||||||  || |||||| ||||||||||  |||||||||||| |||||||||    
T  8903786 gactagaattcactttattcaagatgaataagtgatgtgtctggggttcgaaccccga 8903843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 10958135 - 10958082
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||  |||||  |||||||||||||||||||| |||||| |||||||    
T  10958135 ctagaattcaccttttttgaggtgaataagtggggtgtccggggttcgaacccc 10958082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 23817261 - 23817228
Alignment:
Q  191 gggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||| |||||||||||||||||||||||||||    
T  23817261 gggtgtttggggtttgaaccccgacccctacata 23817228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 24030065 - 24030024
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctaca 222  Q
    ||||||| |||||||||||||||| |||||||| ||||||||    
T  24030065 tgaataaatggggtgtctggggttcgaaccccggcccctaca 24030024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 35498499 - 35498416
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    ||||||||||  |||||||| |||||||||||||||||| |  ||||||| ||| ||||||  | ||||||||||||||| ||||    
T  35498499 ctagaattcacctttttcaaagtgaataagtggggtgtccgaagtttgaa-cccaacccctgcatataataatgcatgtccctgc 35498416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 42181471 - 42181520
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaac 209  Q
    |||||||||  ||||| ||||| |||||||||||||| ||||||||||||    
T  42181471 tagaattcatcttttttaaggtcaataagtggggtgtttggggtttgaac 42181520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 1513576 - 1513524
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||  || ||| ||||| | |||||||||||    
T  1513576 ttttcaaggtgaataagtggggtgttcggtgttcgaacctcaacccctacata 1513524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 5228154 - 5228098
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    |||||||||||||||||||||  || || |||||||| ||||| ||||| |||||||    
T  5228154 aaggtgaataagtggggtgtccaggattcgaaccccggcccctgcataaaaatgcat 5228098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 10020463 - 10020527
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||  ||||||||| |||||||||||| |||  |||||| ||||||| |||||| ||||    
T  10020463 tagaattcacctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcata 10020527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 10091468 - 10091524
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    ||||||||||||| |||||||| ||||| |||||||| ||||| ||||  |||||||    
T  10091468 aaggtgaataagttgggtgtctagggttcgaaccccggcccctgcatacaaatgcat 10091524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 10474518 - 10474570
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| |||||||||||||| |||||| |||| | |||||||||||||| ||||    
T  10474518 tttttaaggtgaataagtgaggtgtccgggggtcgaaccccgacccctgcata 10474570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 14102545 - 14102486
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatg 234  Q
    ||||||||||||||||||||| ||||||  ||||||| |||||  | |||||||||||||    
T  14102545 aaggtgaataagtggggtgtccggggttcaaaccccggcccctgcatataataatgcatg 14102486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 14412562 - 14412503
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatg 234  Q
    ||||||||||||||||||||| ||||||  ||||||| |||||  | |||||||||||||    
T  14412562 aaggtgaataagtggggtgtccggggttcaaaccccggcccctgcatataataatgcatg 14412503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 14772326 - 14772412
Alignment:
Q  156 cgactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctaca--taataatgcatgtctctgc 241  Q
    ||||||||||| |  ||||| ||||||||| || || |||| | |||||||||||||| ||||||||  ||| |||||||||||||||    
T  14772326 cgactagaattaactttttttaaggtgaatcagcggagtgt-tcgggtttgaaccccggcccctacatgtaacaatgcatgtctctgc 14772412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 15222778 - 15222864
Alignment:
Q  156 cgactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctaca--taataatgcatgtctctgc 241  Q
    ||||||||||| |  ||||| ||||||||| || || |||| | |||||||||||||| ||||||||  ||| |||||||||||||||    
T  15222778 cgactagaattaactttttttaaggtgaatcagcggagtgt-tcgggtttgaaccccggcccctacatgtaacaatgcatgtctctgc 15222864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 25711145 - 25711189
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| | |||| |||||||| ||||||||||    
T  25711145 gtgaataagtggggtgtccgaggttcgaaccccggcccctacata 25711189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 30431931 - 30431963
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggg 192  Q
    ||||||||| |||||||||||||||||||||||    
T  30431931 tagaattcatatttttcaaggtgaataagtggg 30431963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 42841796 - 42841828
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccg 213  Q
    |||||||||||||||||||||||| ||||||||    
T  42841796 tgaataagtggggtgtctggggttcgaaccccg 42841828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 48258195 - 48258251
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    ||||||||||| ||||||||| |||||| |||| ||||| ||||||||  |||||||    
T  48258195 aaggtgaataaatggggtgtccggggttcgaactccgactcctacatacaaatgcat 48258251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 29893942 - 29893816
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||| |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  29893942 aaattgccccatcttagatcaattttattttatttgctgttacatttacatcctgcattttatatttcaatttatagccttattcaattataatttgact 29893843  T
Q  101 caaattaatttacttgtaaatacatta 127  Q
    |||||||||||||||| ||||||||||    
T  29893842 caaattaatttacttgcaaatacatta 29893816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 33395040 - 33394914
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||| ||| |||||||||||||||||    
T  33395040 aaattgccccatcttagatcaattttgttttatttgttgttacatgtacaccctgcattttatattctaatttatagctctactcaattataatttgact 33394941  T
Q  101 caaattaatttacttgtaaatacatta 127  Q
    |||||||||||||||||||||||||||    
T  33394940 caaattaatttacttgtaaatacatta 33394914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 50646656 - 50646530
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||  |||||||||| |||||||||| |||| |||||||||||||||||    
T  50646656 aaattgctccatcttaaatcaattttgttttatttgctgttacatgtacaccctgtattttatattctaatttatagtcctactcaattataatttgact 50646557  T
Q  101 caaattaatttacttgtaaatacatta 127  Q
    |||||||||||||||||||||||||||    
T  50646556 caaattaatttacttgtaaatacatta 50646530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 44088092 - 44087970
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    |||||||| ||||||||  ||||||||||||||||| |  |||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  44088092 aaattgcttcatcttagaacaattttgttttatttgttactacatgtacaccctgcattttatattctaatttatagccctactcaattataatttgact 44087993  T
Q  101 caaattaatttacttgtaaatac 123  Q
    ||||||||||||||||| |||||    
T  44087992 caaattaatttacttgtgaatac 44087970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 48542411 - 48542298
Alignment:
Q  5 tgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgactcaaa 104  Q
    ||||||||||||| |||||||| ||||||||||| ||| ||||||| ||| |||||||||||  |||||||||||||| ||||||||||||||| |||||    
T  48542411 tgctccatcttagatcaattttattttatttgctattatatgtacaccctgcattttatattccaatttatagccctactcaattataatttgattcaaa 48542312  T
Q  105 ttaatttacttgta 118  Q
    ||||||||||||||    
T  48542311 ttaatttacttgta 48542298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 48542241 - 48542147
Alignment:
Q  142 gtcagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcatgtc 236  Q
    ||||| |||| ||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||    
T  48542241 gtcaggttgcctactgactagaattaagatttttcaaggtgaataagtggagtgtctggggtttgaaccccggctcctacataatagtgcatgtc 48542147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 43323696 - 43323793
Alignment:
Q  144 cagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcatgtctctgc 241  Q
    |||||||| || ||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||  | ||| ||||||| || ||||| ||||    
T  43323696 cagattgcctatcgattagaattaagatttttcaaggtgaataagtggggtgtctggagtttgaaccccagctcctgcataatagtgtatgtccctgc 43323793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 29893370 - 29893464
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||||||||||||||| |||||||||||||||||| | |||  |||||||||| || |||||||||  ||||||||||| |||||| |||||||    
T  29893370 aaattgctccatcttagatcaattttgttttatttgttattaattgtacatcctgcatttttatattccaatttatagccatattcatttataat 29893464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33394486 - 33394580
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||||| ||||||||| |||||||||||||||||||| |||  |||||||||| || |||||||||  ||||||||||| |||||| |||||||    
T  33394486 aaattgccccatcttagatcaattttgttttatttgctattagttgtacatcctgcatttttatattccaatttatagccatattcatttataat 33394580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 49319483 - 49319416
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtc 236  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||  | |||||||||||||||    
T  49319483 tttttcaaggtgaataagtggggtgtccggggttggaaccccgacccctgcatataataatgcatgtc 49319416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 40261286 - 40261201
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcatgtctctgct 242  Q
    ||||| |||| |||||||| |||||||||||||| |  |||| |||||||||||  | |||||||||||||||||||||| |||||    
T  40261286 gactataatttagattttttaaggtgaataagtgagaagtctagggtttgaaccttggcccctacataataatgcatgtccctgct 40261201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 21023346 - 21023404
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccc 218  Q
    |||||||||  ||||||||||||||||||||||||||| |||||| ||||||| |||||    
T  21023346 tagaattcacctttttcaaggtgaataagtggggtgtcgggggttcgaaccccaacccc 21023404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 29785241 - 29785187
Alignment:
Q  170 atttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| |||||| |||||||  ||||||||||    
T  29785241 atttttcaaggtgaataagtggggtgtccggggttcgaaccccagcccctacata 29785187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 24039986 - 24039910
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcatgtc 236  Q
    ||||||||||  |||||||||||||||||||| |||||  |||||| ||||||||||||| | |||| ||||||||||    
T  24039986 ctagaattcacctttttcaaggtgaataagtgaggtgttcggggttcgaaccccgacccc-atataacaatgcatgtc 24039910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 49039438 - 49039491
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||| |||||||    
T  49039438 ctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccc 49039491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 54265030 - 54264965
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  |||||||||||||||||||| |||||  | ||||||||||| ||||||||||||    
T  54265030 ctagaattcatctttttcaaggtgaataagtgaggtgttcgaggtttgaaccctgacccctacata 54264965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 52031288 - 52031244
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  52031288 gtgaataagtggggtgtctggggttcgaaccccgacccctgcata 52031244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 3442927 - 3442880
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| |||||||| |||| |||||    
T  3442927 aaggtgaataagtggggtgtctggggttcgaaccccggccccgacata 3442880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 6330947 - 6330994
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  6330947 aaggtgaataagtggggtgtccgggatttgaaccccaacccctacata 6330994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 18740920 - 18740994
Alignment:
Q  170 atttttcaaggtgaataagt-ggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    |||||||||||||||||||| ||||||| ||||||| |||| |||||||||  | |||||||||||| |||||||    
T  18740920 atttttcaaggtgaataagtgggggtgtttggggttcgaactccgacccctgcatataataatgcatatctctgc 18740994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 27921997 - 27921919
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtc 236  Q
    ||||||||| |||||| ||| |||||||||| | ||||||||||| |||||||| |||||  | |||||||||||||||    
T  27921997 tagaattcacattttttaagatgaataagtgagatgtctggggttcgaaccccggcccctgcatataataatgcatgtc 27921919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 33076619 - 33076553
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtc 236  Q
    |||| ||||||||||||| ||||||| |||||| ||||||||||||||  | |||||||||||||||    
T  33076619 tttttaaggtgaataagtagggtgtccggggttcgaaccccgacccctgcatataataatgcatgtc 33076553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 38433395 - 38433348
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  38433395 aaggtgaataagtggggtgtctggggttcgaactccgactcctacata 38433348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 30295597 - 30295555
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    |||||||||||||||||||||||||||| ||||||| ||||||    
T  30295597 aaggtgaataagtggggtgtctggggttcgaaccccaacccct 30295555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 30324499 - 30324457
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    |||||||||||||||||||||||||||| ||||||| ||||||    
T  30324499 aaggtgaataagtggggtgtctggggttcgaaccccaacccct 30324457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 33359919 - 33359861
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgaccc 217  Q
    ||||||||||  |||||||||||||||||||||||||||  ||||| ||||| ||||||    
T  33359919 ctagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaacctcgaccc 33359861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40260594 - 40260688
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||||| ||||||||| ||||||||||||||||| || |||  ||| || |||||| |||||||||  ||||||||||| |||| | |||||||    
T  40260594 aaattgccccatcttagatcaattttgttttatttactattagttgtccaccctacatttttatattccaatttatagccatatttatttataat 40260688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 4153264 - 4153223
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  4153264 tttttcaaggtgaataagtgaggtgtttggggtttgaacccc 4153223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 37997839 - 37997892
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||   |||| |||||||||||||||||||||||||||| |||||||    
T  37997839 ctagaattcatcctttttaaggtgaataagtggggtgtctggggttcgaacccc 37997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 45011467 - 45011414
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||| |||||||||||||||  |||||| ||||||||||| ||||||||||||    
T  45011467 ttttttaaggtgaataagtggattgtctgtggtttgaacccggacccctacata 45011414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 6202707 - 6202639
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataa 225  Q
    ||||||||||||  ||||||||| ||||||||| ||||||| |||||| ||||||   |||||||||||    
T  6202707 gactagaattcacctttttcaagatgaataagtagggtgtccggggttcgaaccctagcccctacataa 6202639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 8690295 - 8690251
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||    
T  8690295 gtgaataagtggggtgtccggggttcgaaccccgacccctgcata 8690251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 9924941 - 9924893
Alignment:
Q  176 caaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||| ||||| |||||| |||||||||||||| ||||    
T  9924941 caaggtgaataagtggagtgtccggggttcgaaccccgacccctgcata 9924893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 37574356 - 37574300
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    ||||||||||||||||||| | ||||||||||||||| ||||| ||||  |||||||    
T  37574356 aaggtgaataagtggggtgcccggggtttgaaccccggcccctgcatacaaatgcat 37574300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 4419680 - 4419762
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctg 240  Q
    |||||||||  ||||||||||||||||| || |||||   |||||||||||||| |||||  | |||| ||||||||||||||    
T  4419680 tagaattcacttttttcaaggtgaataaatgaggtgttctgggtttgaaccccggcccctgcatataacaatgcatgtctctg 4419762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 12856268 - 12856221
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||| ||||||||| ||||    
T  12856268 aaggtgaataagtggggtgtccggggttcgaactccgaccccttcata 12856221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 20753136 - 20753183
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||| |||||| |||||| |||||||| ||||||||||    
T  20753136 aaggtgaataagtgtggtgtccggggttcgaaccccggcccctacata 20753183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 32048551 - 32048617
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||  ||||| ||| ||||||| |||| |||||||||||  ||||||||||||||||||    
T  32048551 gactagaattcacttttttaaag-tgaataaatgggctgtctggggttcaaaccccgacccctacata 32048617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 217
Target Start/End: Complemental strand, 32339402 - 32339371
Alignment:
Q  186 aagtggggtgtctggggtttgaaccccgaccc 217  Q
    ||||||||||||||||||||||||||||||||    
T  32339402 aagtggggtgtctggggtttgaaccccgaccc 32339371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 37032190 - 37032237
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| ||| |||||||||| ||||    
T  37032190 aaggtgaataagtggggtgtccggggttcgaatcccgacccctgcata 37032237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 38690750 - 38690703
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  38690750 aaggagaataagtggggtgtccggggttcgaaccccgacccctgcata 38690703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 47017957 - 47018004
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  47017957 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 47018004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 2832086 - 2832124
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  2832086 tgaataagtggggtgtttggggttcgaaccccgacccct 2832124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 30057300 - 30057262
Alignment:
Q  186 aagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  30057300 aagtggggtgtccggggtttgaaccccgacccctgcata 30057262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 40051700 - 40051662
Alignment:
Q  186 aagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  40051700 aagtggggtgtctggggttcgaacccctacccctacata 40051662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 42381105 - 42381143
Alignment:
Q  186 aagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  42381105 aagtggggtgtctgaggttcgaaccccgacccctacata 42381143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 43362183 - 43362221
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  43362183 tgaataagtggggtgtccggggttcgaaccccgacccct 43362221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 55485841 - 55485875
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgac 215  Q
    |||||||||||||||||||||||| ||||||||||    
T  55485841 tgaataagtggggtgtctggggttcgaaccccgac 55485875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 20166406 - 20166353
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||| ||||||||||||| ||||||||| ||||| || ||||| ||||    
T  20166406 tttttcaaggagaataagtggggtatctggggttcgaacctcggcccctgcata 20166353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 20610841 - 20610776
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||| |||||||||||||||| |||| || ||| |||||||| ||||| ||||    
T  20610841 ctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaaccccggcccctgcata 20610776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 41492492 - 41492575
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    ||||||||||  ||||||||||| |||||||||||||||   |||| |||||||| |||||  | ||||||||||||||| ||||    
T  41492492 ctagaattcacctttttcaaggtaaataagtggggtgtc-caggttcgaaccccggcccctgcatataataatgcatgtccctgc 41492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 42411471 - 42411512
Alignment:
Q  183 aataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||| |||||| |||||||||||||| ||||    
T  42411471 aataagtggggtgtccggggttcgaaccccgacccctgcata 42411512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 43323536 - 43323589
Alignment:
Q  23 ttttgttttatttgctgttacatgtacatcctacattttatattttaatttata 76  Q
    |||||||||||||||| |||||| |||| ||| |||||||||||| ||| ||||    
T  43323536 ttttgttttatttgctattacatttacaccctgcattttatatttcaatctata 43323589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 49607634 - 49607605
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttg 206  Q
    ||||||||||||||||||||||||||||||    
T  49607634 aaggtgaataagtggggtgtctggggtttg 49607605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 54854172 - 54854225
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||  |||||||||||||||||||| | |||| |||||| |||||||    
T  54854172 ctagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaacccc 54854225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 9477422 - 9477466
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| ||||||||| ||| |||| ||||    
T  9477422 gtgaataagtggggtgtctggagtttgaaccacgatccctgcata 9477466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 9693043 - 9692999
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  9693043 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 9692999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 14149874 - 14149830
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  14149874 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 14149830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 22751090 - 22751046
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||| ||||||||  ||||||||||||||||||||| ||||    
T  22751090 gtgaataaatggggtgttcggggtttgaaccccgacccctgcata 22751046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 28520745 - 28520789
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  28520745 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 28520789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 34974785 - 34974729
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    |||| |||||||||||||||| |||||| |||||||  ||||||||||  |||||||    
T  34974785 aaggagaataagtggggtgtccggggttcgaaccccagcccctacatacaaatgcat 34974729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 35230302 - 35230346
Alignment:
Q  173 tttcaaggtgaataagtggggtgtctggggtttgaaccccgaccc 217  Q
    ||||||||| ||||||||||||||| | |||| ||||||||||||    
T  35230302 tttcaaggtaaataagtggggtgtccgaggttcgaaccccgaccc 35230346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 35747493 - 35747541
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataa 225  Q
    ||||||||||||||||||||| || ||| ||||| |||||||| |||||    
T  35747493 aaggtgaataagtggggtgtccggagttcgaacctcgacccctgcataa 35747541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 36257775 - 36257731
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  36257775 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 36257731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 36954218 - 36954174
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||| ||||||||| |||||| |||||||||||||| ||||    
T  36954218 gtgaataaatggggtgtccggggttcgaaccccgacccctgcata 36954174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 37889620 - 37889664
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||| |||||| |||||| |||||||||||||| ||||    
T  37889620 gtgaataagtgaggtgtccggggttcgaaccccgacccctgcata 37889664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 40150554 - 40150499
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccc--tacataataatgcat 233  Q
    ||||||||||| |||||| |||||| |||||||||||||  || ||||||||||||    
T  40150554 gtgaataagtgaggtgtccggggttcgaaccccgacccctgtatataataatgcat 40150499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 44251342 - 44251394
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    ||||||| ||||||||| ||| || |||||||||||||| ||||| |||||||    
T  44251342 tgaataaatggggtgtccgggattcgaaccccgacccctgcataaaaatgcat 44251394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 47416569 - 47416505
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||  |||||||| |||||||||||||||||| | | || ||||||| |||||| ||||    
T  47416569 tagaattcacctttttcaaagtgaataagtggggtgtccgagattcgaaccccaacccctgcata 47416505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 48968224 - 48968268
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  48968224 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 48968268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 56546463 - 56546507
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||| |||| |||||||| ||||| ||||    
T  56546463 gtgaataagtggggtgtctgtggttcgaaccccggcccctgcata 56546507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 56555632 - 56555576
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    ||||||||||||||||||||  | |||| |||||||||||||| ||||  |||||||    
T  56555632 aaggtgaataagtggggtgttcgaggttcgaaccccgacccctgcatataaatgcat 56555576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 38943114 - 38943240
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||| |||||||||||  |||||||||  ||| |||||||||||||||||    
T  38943114 aaattgccccatcttagatcaattttgttttatttgttgttacatgtacaccctgcattttatattccaatttatagttctactcaattataatttgact 38943213  T
Q  101 caaattaatttacttgtaaatacatta 127  Q
    |||||||||||||||||||||||||||    
T  38943214 caaattaatttacttgtaaatacatta 38943240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 19033677 - 19033564
Alignment:
Q  9 ccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgactcaaattaa 108  Q
    ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||  |||| |||||||||||||||||||||||||    
T  19033677 ccatcttagatcaattttattttatttgctgttacatgtacaccctacattttatatttcaatttataatcctactcaattataatttgactcaaattaa 19033578  T
Q  109 tttacttgtaaata 122  Q
    ||||||| ||||||    
T  19033577 tttacttataaata 19033564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 37922735 - 37922844
Alignment:
Q  9 ccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgactcaaattaa 108  Q
    ||||||||| |||||||||||||||||||||||| ||||||| ||| |||||||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  37922735 ccatcttagatcaattttgttttatttgctgttatatgtacaccctgcattttatatttcaatttatagtcctactcaattataatttgactcaaattaa 37922834  T
Q  109 tttacttgta 118  Q
    ||||||||||    
T  37922835 tttacttgta 37922844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 37922897 - 37922980
Alignment:
Q  153 taccgactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcatgtc 236  Q
    |||||||||||||| |||||||| || |||||||||| ||||||||  ||||||||||||||| ||||||||||| ||||||||    
T  37922897 taccgactagaattaagattttttaaagtgaataagtagggtgtcttaggtttgaaccccgactcctacataatagtgcatgtc 37922980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 2332357 - 2332263
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctac-attttatattttaatttatagccctattcaattataat 94  Q
    ||||||||||||||||  |||||||||||||||||||| |||  |||||||||||| ||||||||||  |||||||||| ||||| |||||||||    
T  2332357 aaattgctccatcttaaatcaattttgttttatttgctattagttgtacatcctacaattttatattccaatttatagctctatttaattataat 2332263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 32252916 - 32252991
Alignment:
Q  163 aattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgtc 236  Q
    |||||| ||||||||| |||||||| | |||||||||||||| ||||||||||||||||  |||||||||||||||    
T  32252916 aattcacatttttcaaagtgaataaattgggtgtctggggttcgaaccccgacccctacatataataatgcatgtc 32252991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 19033139 - 19033225
Alignment:
Q  9 ccatcttagctcaattttgttttatttgctgttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||||||| |||||||||||||||||||| |||  ||||||||||  | |||||||||||||||||||| | |||||| |||||||    
T  19033139 ccatcttagatcaattttgttttatttgctattagttgtacatcctgtatttttatattttaatttatagtcatattcatttataat 19033225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 20186954 - 20186884
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||  | ||||||||||||||| ||||    
T  20186954 tttttcaaggtgaataagtggggtgtctggggtt--aaccccgacccctgcatataataatgcatgtccctgc 20186884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 11246487 - 11246552
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||||||| |||||||||||| |||||||||||||| ||||||||||| ||||    
T  11246487 ctagaattcacctttttcaagctgaataagtgggatgtctggggtttgagccccgacccctgcata 11246552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 17557119 - 17557048
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgtctctgc 241  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||||||||  |||| |||||||||||||||    
T  17557119 ttttttaaggtgaataagtggggtgtccggg-tttgaaccccgacccctacatataacaatgcatgtctctgc 17557048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 31556920 - 31556835
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgct 242  Q
    ||||||||||   |||||||||||||||||||||||||| |||||| |||| |||||||||  | |||| |||||||||| |||||    
T  31556920 ctagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaactccgacccctgcatataacaatgcatgtccctgct 31556835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 17137861 - 17137937
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatg 234  Q
    |||||||||  ||||||||||||||||||||| ||||| |||||| ||||||||| ||||  | |||||||||||||    
T  17137861 tagaattcacgtttttcaaggtgaataagtggagtgtcgggggttcgaaccccgatccctgcatataataatgcatg 17137937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 42553135 - 42553192
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgaccc 217  Q
    ||||||||| |||||||||||||||||||||  ||||| |||||| ||||||||||||    
T  42553135 tagaattcacatttttcaaggtgaataagtgtagtgtccggggttcgaaccccgaccc 42553192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 843379 - 843426
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  843379 aaggtgaataagtggggtgtccggggttcgaaccccgtcccctacata 843426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 1244738 - 1244785
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  1244738 aaggtgaataagtggggtgtctggggttcgaaccctgacccctgcata 1244785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 15570194 - 15570148
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  15570194 aaggtgaataaatggggtgtctggg-tttgaaccccgacccctacata 15570148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 18175287 - 18175244
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||| ||||||||||| |||||||||||||||||||    
T  18175287 tgaataagtgggatgtctggggttcgaaccccgacccctacata 18175244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 27006442 - 27006383
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccc 218  Q
    ||||||||||  ||||||||||||||||||||| ||||| || ||| |||||||||||||    
T  27006442 ctagaattcacctttttcaaggtgaataagtggagtgtccggagttcgaaccccgacccc 27006383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 29561749 - 29561690
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    |||||||||  ||||||||| |||||||||||| ||||||||||| |||||||| |||||    
T  29561749 tagaattcacctttttcaagatgaataagtgggatgtctggggttcgaaccccggcccct 29561690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 33800977 - 33800930
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  33800977 aaggtgaataagtggggtgtctggggttcgaaccccggcccctgcata 33800930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 18101955 - 18102024
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctct 239  Q
    |||| |||||||||||||||||||||||||||| |||| ||| |||||  | |||||||| |||||||||    
T  18101955 tttttaaggtgaataagtggggtgtctggggttcgaactccggcccctgcatataataatacatgtctct 18102024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 37923511 - 37923425
Alignment:
Q  9 ccatcttagctcaattttgttttatttgctgttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||||||| |||||||||||||||||||| |||  ||| || |||||| |||||||||  ||||||||||| |||| | |||||||    
T  37923511 ccatcttagatcaattttgttttatttgctattagttgtccaccctacatttttatattccaatttatagccatatttacttataat 37923425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 3535930 - 3535983
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccg 213  Q
    |||||||||  ||||| ||||||||||||||||||||| |||||| ||||||||    
T  3535930 tagaattcactttttttaaggtgaataagtggggtgtccggggttcgaaccccg 3535983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 4674829 - 4674873
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||    
T  4674829 gtgaataagtggggtgtccggggttcgaaccccgacccctgcata 4674873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 20191525 - 20191469
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    ||||||||||||||| ||||| |||||| |||||||||||||| ||||  |||||||    
T  20191525 aaggtgaataagtggagtgtccggggttcgaaccccgacccctgcatataaatgcat 20191469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 27278768 - 27278812
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||    
T  27278768 gtgaataaatggggtgtctgaggttcgaaccccgacccctacata 27278812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 36045148 - 36045192
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||    
T  36045148 gtgaataagtggggtgtccggggttcgaaccccgacccctgcata 36045192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 38129019 - 38129071
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||| |||||  ||||| |||||||||||||| ||||    
T  38129019 ttttcaaggtgaataagtggagtgtccagggttcgaaccccgacccctgcata 38129071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 39684339 - 39684275
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||  ||||| |||||||||||||||| |||| ||||||| || || ||||||||||||    
T  39684339 tagaattcaccttttttaaggtgaataagtgggatgtccggggtttaaatcctgacccctacata 39684275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 40384353 - 40384270
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctg 240  Q
    ||||||||||  ||||| ||||||||||||||||||||| || ||| |||||||  || ||  | |||||||||||||||||||    
T  40384353 ctagaattcaccttttttaaggtgaataagtggggtgtccggagttcgaaccccagccgctgcatataataatgcatgtctctg 40384270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 41539418 - 41539366
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaac 209  Q
    ||||||||||||  ||||||||| | |||||||||||||||||||||| ||||    
T  41539418 gactagaattcacctttttcaagattaataagtggggtgtctggggttcgaac 41539366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 112
Target Start/End: Original strand, 2331551 - 2331582
Alignment:
Q  81 tattcaattataatttgactcaaattaattta 112  Q
    ||||||||||||||||||||||||||||||||    
T  2331551 tattcaattataatttgactcaaattaattta 2331582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 7234883 - 7234930
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||| |||||| ||||||||| ||||||||||| |||||||    
T  7234883 aaggtgaataaatggggtatctggggttcgaaccccgacctctacata 7234930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 8015919 - 8015861
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctaca--taataatgcat 233  Q
    ||||||||||||||||||||| |||||| |||||||| ||||| ||  |||||||||||    
T  8015919 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatgtaataatgcat 8015861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 18872605 - 18872558
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||  |||||| |||||||||||||| ||||    
T  18872605 aaggtgaataagtggggtgttcggggttcgaaccccgacccctgcata 18872558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 22687875 - 22687938
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacat 223  Q
    |||||||||  ||||||||||||||||||||||||||  ||||||  ||| || ||||||||||    
T  22687875 tagaattcacctttttcaaggtgaataagtggggtgttcggggttcaaactccaacccctacat 22687938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 25661016 - 25660949
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||  |||||| || | ||||||||||||||||||||||| ||| |||| ||||| ||||    
T  25661016 gactagaattctcatttttaaacgagaataagtggggtgtctggggttcgaatcccggcccctgcata 25660949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 28378076 - 28378123
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||  |||||| ||||||| |||||||||||    
T  28378076 aaggtgaataagtggggtgttcggggttcgaaccccaacccctacata 28378123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 34921125 - 34921172
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||| ||||| ||||| |||||||||||||| ||||    
T  34921125 aaggtgaataagtgggatgtcttgggttagaaccccgacccctgcata 34921172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 37986860 - 37986942
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctct 239  Q
    ||||||||||  |||||||||||||||||||||| |||| ||||||  ||| |||||| ||  | |||||||||||| |||||    
T  37986860 ctagaattcacctttttcaaggtgaataagtgggatgtccggggttcaaactccgacctctgcatataataatgcatatctct 37986942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 6291096 - 6291046
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacc 210  Q
    |||||||||  |||||||| |||||||| |||||||||||||||| |||||    
T  6291096 tagaattcacctttttcaatgtgaataaatggggtgtctggggttcgaacc 6291046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 16969673 - 16969727
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataa 225  Q
    |||||||||||||||||||||||||| || | ||  |||||||| ||||||||||    
T  16969673 tttttcaaggtgaataagtggggtgtttgagattcaaaccccgatccctacataa 16969727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 211
Target Start/End: Original strand, 27025440 - 27025474
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccc 211  Q
    |||||||||||||||||||||||||||| ||||||    
T  27025440 aaggtgaataagtggggtgtctggggttcgaaccc 27025474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 28537237 - 28537183
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccg 213  Q
    ||||||||||   ||||||| |||||||||||||||||| |||||| ||||||||    
T  28537237 ctagaattcaccattttcaaagtgaataagtggggtgtccggggttcgaaccccg 28537183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 31907742 - 31907688
Alignment:
Q  170 atttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||||||  | ||||||||||  ||||||| ||||    
T  31907742 atttttcaaggtgaataagtggggtgttcgaggtttgaaccatgacccctgcata 31907688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 19608715 - 19608650
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||| ||||||||||||||  ||||| || ||| |||||||||||||| ||||    
T  19608715 ctagaattcattttttttaaggtgaataagtgaagtgtccggagttcgaaccccgacccctgcata 19608650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 22396981 - 22397034
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||   |||||||| ||||||||||||||||| |||||| |||||||    
T  22396981 ctagaattcacccttttcaagatgaataagtggggtgtccggggttcgaacccc 22397034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 24651226 - 24651173
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||| ||||||||||||| ||||||  ||| ||||||| |||||||||||    
T  24651226 tttttcaatgtgaataagtgggatgtctgaagttcgaaccccaacccctacata 24651173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 38361587 - 38361542
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtt 204  Q
    |||||||||| ||||||||||| |||||| ||||||||||| ||||    
T  38361587 ctagaattcacatttttcaaggagaataaatggggtgtctgaggtt 38361542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38943692 - 38943655
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgct 38  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  38943692 aaattgccccatcttagatcaattttgttttatttgct 38943655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 1463952 - 1463908
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  1463952 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 1463908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 7147012 - 7147091
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtc 236  Q
    ||||||||||  |||||||| || ||||| || |||||| | |||| ||||||||||||||  | |||||||||||||||    
T  7147012 ctagaattcacctttttcaatgtaaataaatgaggtgtcagaggttcgaaccccgacccctgcatataataatgcatgtc 7147091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 10943797 - 10943753
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  10943797 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 10943753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 15106893 - 15106937
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    |||| ||| ||||||||||||||||| |||||| |||||||||||    
T  15106893 ttttaaagatgaataagtggggtgtccggggttcgaaccccgacc 15106937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 16720592 - 16720636
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||| |||||||||||| || |||||||||||||||||| ||||    
T  16720592 gtgaagaagtggggtgtccggtgtttgaaccccgacccctgcata 16720636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 20735189 - 20735233
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| ||| || |||||||| ||||||||||    
T  20735189 gtgaataagtggggtgtccgggattcgaaccccggcccctacata 20735233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 37304015 - 37303971
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||  ||||| |||||||||||||| ||||    
T  37304015 gtgaataagtggggtgtccagggttcgaaccccgacccctgcata 37303971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 38618692 - 38618728
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccg 213  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  38618692 aaggtgaataagtggggtgtccggggttcgaaccccg 38618728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 60446 - 60324
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||| | |  |||||||||| |||||||||| |||| |||||||||||||||||    
T  60446 aaattgctccatcttagatcaattttgttttatttgctattacatgtacaccttgtattttatattctaatttatagtcctactcaattataatttgact 60347  T
Q  101 caaattaatttacttgtaaatac 123  Q
    ||||||||||||||||| |||||    
T  60346 caaattaatttacttgtgaatac 60324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 43139176 - 43139293
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||| |||||||||||  ||||||||||| || ||||||||||||||| |    
T  43139176 aaattgccccatcttagatcaattttgttttatttgctgttagatgtacaccctgcattttatattccaatttatagccatactcaattataatttgatt 43139275  T
Q  101 caaattaatttacttgta 118  Q
    ||||||||||||||||||    
T  43139276 caaattaatttacttgta 43139293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21571015 - 21570889
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataatttgact 100  Q
    ||||||| | || |||| |||||||||||||||||| ||||| ||||||| |||  ||||||||||||||||||||| |||| |||||||||||||||||    
T  21571015 aaattgccctattttagatcaattttgttttatttgttgttatatgtacaccctgtattttatattttaatttatagtcctactcaattataatttgact 21570916  T
Q  101 caaattaatttacttgtaaatacatta 127  Q
    ||||||||| || ||||||||||||||    
T  21570915 caaattaatgtatttgtaaatacatta 21570889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 233
Target Start/End: Original strand, 43139355 - 43139446
Alignment:
Q  142 gtcagattgcataccgactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    |||||||||| ||| |||||||||| ||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  43139355 gtcagattgcctactgactagaattaagatttttcaaagtgagtaagtggggtgtttggggtttgaaccccgactcctacataatagtgcat 43139446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 16935684 - 16935629
Alignment:
Q  164 attcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  16935684 attcacatttttcaagttgaataagtggggtgtctggggttcgaaccccaacccct 16935629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 7345529 - 7345446
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    |||||||||  ||||| |||||||||||||||||||| ||| ||| ||| ||||||||||  | ||||||||||||||| ||||    
T  7345529 tagaattcaccttttttaaggtgaataagtggggtgtttggagttggaagcccgacccctgcatataataatgcatgtccctgc 7345446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 23239208 - 23239161
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  23239208 aaggtgaataagtggggtgtccggggttcaaaccccgacccctacata 23239161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 43468716 - 43468763
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| || ||| |||||||||||||||||||    
T  43468716 aaggtgaataagtggggtgtccggagttcgaaccccgacccctacata 43468763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 21570443 - 21570537
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||||| | ||||||| |||||||||||||||||||| |||  |||||||||| || |||||||||  |||||||| || |||| | |||||||    
T  21570443 aaattgcccaatcttagatcaattttgttttatttgctattagttgtacatcctgcatttttatattccaatttataaccatatttatttataat 21570537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 28979129 - 28979063
Alignment:
Q  158 actagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| |||||| |||||| |||||||||||||| |||||| |||||| |||  ||||||||||||||    
T  28979129 actataattcacattttttaaggtgaataagtgaggtgtccggggttcgaattccgacccctacata 28979063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 18577203 - 18577150
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||| ||||    
T  18577203 tttttcaaggtgaataagtgaaatgtttggggtttgaaccccgacccctgcata 18577150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 22847255 - 22847320
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||| |||||||||||||| ||||| ||||||| ||||| |||||||| ||||    
T  22847255 ctagaattcaccttttttaaggtgaataagtgaggtgtgtggggttcgaacctcgacccctgcata 22847320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 27821898 - 27821963
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||| |||||||||||||| ||||| |||| |||||||||||| |||| ||||    
T  27821898 ctagaattcaccttttttaaggtgaataagtgaggtgtgtgggatttgaaccccgatccctccata 27821963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 31129383 - 31129331
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    |||||||||||||||||| |||||| ||||||||||||| | ||||||||||||    
T  31129383 gtgaataagtggggtgtccggggttcgaaccccgacccc-atataataatgcat 31129331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 39432333 - 39432386
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||| |||||||||||||||||||| |||| ||||||| |||||| ||||    
T  39432333 tttttcaaagtgaataagtggggtgtctgaggttcgaaccccaacccctgcata 39432386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 220356 - 220412
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    |||||||||  ||||||||||||||||||||||||||| ||| || |||||| ||||    
T  220356 tagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacc 220412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 574313 - 574262
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||| ||||    
T  574313 ttttcaaggtgaataagtggg-tgtccggggttcgaaccccgacccctgcata 574262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 689511 - 689567
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    |||||||||  ||||||||||||||||||||||||||| ||| || |||||| ||||    
T  689511 tagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacc 689567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 733979 - 734035
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    |||||||||  ||||||||||||||||||||||||||| ||| || |||||| ||||    
T  733979 tagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacc 734035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 857875 - 857931
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    |||||||||  ||||||||||||||||||||||||||| ||| || |||||| ||||    
T  857875 tagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacc 857931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 4798551 - 4798599
Alignment:
Q  176 caaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  4798551 caaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 4798599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 10309674 - 10309718
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||  ||||||||||||||||||||| ||||    
T  10309674 gtgaataagtggggtgttcggggtttgaaccccgacccctgcata 10309718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 33982271 - 33982227
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||| ||||||||||||| |||||||||||||| ||||    
T  33982271 gtgaataagtgcggtgtctggggttcgaaccccgacccctgcata 33982227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 35779855 - 35779775
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcatgtctct 239  Q
    ||||||||||  ||||||||| |||||||||||||||||   |||| |||||||||||   | |||| |||||||||||||    
T  35779855 ctagaattcatctttttcaagatgaataagtggggtgtcctaggttcgaaccccgacctgcatataacaatgcatgtctct 35779775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 9525041 - 9524994
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||| |||||||||||||| |||||||| ||||| ||||    
T  9525041 aaggtgaataagtagggtgtctggggttcgaaccccggcccctgcata 9524994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 10199753 - 10199800
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||| ||||||| |||||||| ||||| ||||    
T  10199753 aaggtgaataagtggggtgtttggggttcgaaccccggcccctgcata 10199800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 10201346 - 10201299
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||| || |||||| |||||| |||||||||||||||||||    
T  10201346 aaggtgaataaatgaggtgtccggggttcgaaccccgacccctacata 10201299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 11823046 - 11822999
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||||||||    
T  11823046 aaggtgaataagtggggtgtccggggttcaaaccccggcccctacata 11822999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 13537326 - 13537369
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||    
T  13537326 tgaataagtggggtgtctggggttcgaaccccgacacctgcata 13537369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 13626874 - 13626917
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||    
T  13626874 tgaataagtggggtgtctggggttcgaaccccgacacctgcata 13626917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 13702363 - 13702410
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||| |||||||| |||| |||||||||||||| ||||    
T  13702363 aaggtgaataagtgaggtgtctgaggttcgaaccccgacccctgcata 13702410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 14010783 - 14010822
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  14010783 aaggtgaataagtggggtgtccggggttcgaaccccgacc 14010822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 15042376 - 15042423
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||| ||||    
T  15042376 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcata 15042423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 17467366 - 17467327
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccc 211  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  17467366 ttttcaaggtgaataagtggggtgtccggggttcgaaccc 17467327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 24608494 - 24608541
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||| |||||||||||||| |||||||| ||||| ||||    
T  24608494 aaggtgaataagtagggtgtctggggttcgaaccccggcccctgcata 24608541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 25470839 - 25470917
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgt 235  Q
    ||||||||||  || |||||||||||||| ||||||||| | |||| |||||||||||| |  | ||||||||||||||    
T  25470839 ctagaattcaccttcttcaaggtgaataaatggggtgtccgaggttcgaaccccgacccatgaatataataatgcatgt 25470917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 26657947 - 26657904
Alignment:
Q  171 tttttcaaggtgaataagt-ggggtgtctggggtttgaaccccg 213  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||    
T  26657947 tttttcaaggtgaataagtgggggtgtctggggttcgaaccccg 26657904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 30660037 - 30659990
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  30660037 aaggtgaaatagtggggtgtccggggtttgaaccccgacccctgcata 30659990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 34073250 - 34073297
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||  ||||||||||||    
T  34073250 aaggtgaataagtggggtgtccggggttcgaaccttgacccctacata 34073297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 42762041 - 42762088
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| ||| |||||||| |||||||| ||||    
T  42762041 aaggtgaataagtggggtgtccgggatttgaacctcgacccctgcata 42762088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 43456667 - 43456710
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||    
T  43456667 tgaataagtggggtgtccggggttcgaaccccgacccttacata 43456710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 43508459 - 43508506
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||||||||    
T  43508459 aaggtgaataagtggggtgtccggggttcaaaccccggcccctacata 43508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 6325371 - 6325329
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggg 201  Q
    ||||||||||  ||||||||||||||| |||||||||||||||    
T  6325371 ctagaattcacctttttcaaggtgaatgagtggggtgtctggg 6325329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 19925095 - 19925157
Alignment:
Q  162 gaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||  ||||| |||||||||||||| |||||  ||| || |||||||||||||||||||    
T  19925095 gaattcaccttttttaaggtgaataagtgaggtgttcgggattcgaaccccgacccctacata 19925157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 43139988 - 43139894
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctaca-ttttatattttaatttatagccctattcaattataat 94  Q
    ||||||| ||||||||| |||||||| ||||||||||| |||  ||| ||| ||| | |||||||||| ||||| ||||| |||| | |||||||    
T  43139988 aaattgccccatcttagatcaattttattttatttgctattagttgtccattctatatttttatatttcaatttctagccatatttatttataat 43139894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 13654824 - 13654877
Alignment:
Q  163 aattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    |||||| |||||| || |||||||||||||||||| || ||||||| |||||||    
T  13654824 aattcacattttttaaagtgaataagtggggtgtccggagtttgaatcccgacc 13654877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 13713466 - 13713519
Alignment:
Q  163 aattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    |||||| |||||| || |||||||||||||||||| || ||||||| |||||||    
T  13713466 aattcacattttttaaagtgaataagtggggtgtccggagtttgaatcccgacc 13713519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 17855730 - 17855677
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||  |||||||    
T  17855730 gtgaataagtggggtgtccggggttcgaaccccggcccctgcatacaaatgcat 17855677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 24572844 - 24572909
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||   |||| ||||||||||| || ||||| |||||||||||||||| || |||||||    
T  24572844 ctagaattcaacatttttaaggtgaataaatgaggtgtatggggtttgaaccccggcctctacata 24572909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 30500558 - 30500486
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgtctctgc 241  Q
    |||||||| ||||||||||||   ||| || ||| ||||||| ||||||||  ||||||||||||||||||||    
T  30500558 tttttcaatgtgaataagtggatggtccggagttcgaaccccaacccctacatataataatgcatgtctctgc 30500486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 2696614 - 2696570
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  2696614 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 2696570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 2800100 - 2800056
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  2800100 gtgaataagtggggtgtccggggttcgaaccccggcccctgcata 2800056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 4604347 - 4604403
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    |||||||||  ||||| ||||||||||||||| ||||  |||||| |||||||||||    
T  4604347 tagaattcatcttttttaaggtgaataagtggagtgttcggggttcgaaccccgacc 4604403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 14683960 - 14683920
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgaccc 217  Q
    |||||||||||||||| |||| |||||| ||||||||||||    
T  14683960 aaggtgaataagtgggatgtccggggttcgaaccccgaccc 14683920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 33570440 - 33570480
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgaccc 217  Q
    ||||||||||||||||||||| | |||| ||||||||||||    
T  33570440 aaggtgaataagtggggtgtccgaggttcgaaccccgaccc 33570480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 38790586 - 38790618
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||||||||||||||||| |||||||    
T  38790586 gtgaataagtggggtgtctggggttcgaacccc 38790618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16264 - 16357
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataat 94  Q
    |||||| |||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  16264 aaattggtccatcttagatcaattttgttttatttgctactagctgtacatcctacattttatatttcaatttatagctctatttaattataat 16357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 115
Target Start/End: Complemental strand, 17000 - 16965
Alignment:
Q  80 ctattcaattataatttgactcaaattaatttactt 115  Q
    ||||||||||||||||||||||||||||||||||||    
T  17000 ctattcaattataatttgactcaaattaatttactt 16965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6608478 - 6608385
Alignment:
Q  1 aaattgctccatcttagctcaattttgttttatttgctgttacatgtacatcctacattttatattttaatttatagccctattcaattataat 94  Q
    ||||||| ||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||  |||||||||| ||||| |||||||||    
T  6608478 aaattgccccatcttagatcaattttgttttatttgctattagttgtacatcctacattttatattccaatttatagctctatttaattataat 6608385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 26669652 - 26669717
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  26669652 ctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacata 26669717  T

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Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 4844244 - 4844180
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||  |||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||    
T  4844244 tagaattcacttttttcaaggtgaataagtgaggtgtctgaggtttaaaccccgacccctgcata 4844180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 6606751 - 6606793
Alignment:
Q  80 ctattcaattataatttgactcaaattaatttacttgtaaata 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  6606751 ctattcaattataatttgactcaaattaatttacttataaata 6606793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 30833107 - 30833054
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  30833107 tttttcaaggagaataagtggggtgtccggggttcgaaccccgacccctgcata 30833054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 9455923 - 9455867
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacataataatgcat 233  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||||  |||||||    
T  9455923 aaggtgaataagtggggtgtttggggttcgaactccgacccctacatacaaatgcat 9455867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 32540945 - 32541028
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccc--tacataataatgcatgtctctgc 241  Q
    |||||||||  ||||| |||||||||||||||||| ||||| ||| |||| |||||| |  || ||||||||||||||||||||    
T  32540945 tagaattcactttttttaaggtgaataagtggggtatctggagttcgaactccgacctctatatataataatgcatgtctctgc 32541028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 2970273 - 2970226
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||||||||| || ||||||||||    
T  2970273 aaggtgaataagtggggtgtccggggtttgaacctcggcccctacata 2970226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 7563587 - 7563645
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctaca--taataatgcat 233  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| ||  |||||||||||    
T  7563587 aaggtgaataagtggggtgtccggggtttgaaccctgacccctgcatgtaataatgcat 7563645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 9491746 - 9491793
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  9491746 aaggtgaataagtggggtgtccggggttcgaaccccggcccctacata 9491793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 24257006 - 24256936
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctct 239  Q
    |||||||||||||||||||||||| || |||||| ||||| || |||||  | ||||||||||||||||||    
T  24257006 tttttcaaggtgaataagtggggtatccggggttcgaacctcggcccctgcatataataatgcatgtctct 24256936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 26528651 - 26528604
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  26528651 aaggtgaataagtggggtgtccgaggtttgaaccccgacccctgcata 26528604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 19680241 - 19680295
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccg 213  Q
    ||||||||||  |||||||||| |||||||||||||||| |||||| ||||||||    
T  19680241 ctagaattcacctttttcaaggagaataagtggggtgtccggggttcgaaccccg 19680295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 5544366 - 5544313
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||| |||| ||||||||||||| ||||||||| |||||||||||||| ||||    
T  5544366 ttttttaaggagaataagtggggtatctggggttcgaaccccgacccctgcata 5544313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 20149973 - 20150038
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgt-ctggggtttgaaccccgacccctacata 224  Q
    |||||||||  |||||||||||||||||||||||||| | |||||| ||||||| | |||||||||    
T  20149973 tagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaaccccaatccctacata 20150038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 22182859 - 22182794
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgt-ctggggtttgaaccccgacccctacata 224  Q
    |||||||||  |||||||||||||||||||||||||| | |||||| ||||||| | |||||||||    
T  22182859 tagaattcacctttttcaaggtgaataagtggggtgtccaggggttcgaaccccaatccctacata 22182794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 1395583 - 1395643
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct 219  Q
    ||||||||||  |||||||||||||||||||| ||| ||||||| | |||||| |||||||    
T  1395583 ctagaattcacctttttcaaggtgaataagtgtggtatctggggatcgaacccggacccct 1395643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 1488177 - 1488106
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtctctgc 241  Q
    |||| ||||||||||| |||||||| ||||||| ||||||||||| ||  | |||| |||||||||||||||    
T  1488177 tttttaaggtgaataaatggggtgtttggggttcgaaccccgacctctgcatataacaatgcatgtctctgc 1488106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 19642561 - 19642597
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacc 216  Q
    ||||||||||||||||||||||||| |||||||||||    
T  19642561 gtgaataagtggggtgtctggggttcgaaccccgacc 19642597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 29284199 - 29284155
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||    
T  29284199 gtgaataagtggggtgtccggggttcgaaccccgatccctacata 29284155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 753323 - 753370
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||| ||||||||||||||||  ||||| |||||||||||||||||||    
T  753323 aaggggaataagtggggtgtccagggttcgaaccccgacccctacata 753370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 6530215 - 6530262
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||| | ||||||||||||| ||||| ||||    
T  6530215 aaggtgaataagtggggtgtccgaggtttgaaccccggcccctgcata 6530262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 112
Target Start/End: Original strand, 6607713 - 6607744
Alignment:
Q  81 tattcaattataatttgactcaaattaattta 112  Q
    ||||||||||||||||||||||||||||||||    
T  6607713 tattcaattataatttgactcaaattaattta 6607744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 20568268 - 20568315
Alignment:
Q  177 aaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||||||||  |||||| |||||||||||||| ||||    
T  20568268 aaggtgaataagtggggtgttcggggttcgaaccccgacccctgcata 20568315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 30668175 - 30668257
Alignment:
Q  157 gactagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtct 237  Q
    ||||| |||||| |||||| ||||||||||||||||||||  | |||| |||| | |||||||  | ||||||||||||||||    
T  30668175 gactataattcacattttttaaggtgaataagtggggtgttcgtggttcgaactctgacccctgcatataataatgcatgtct 30668257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 7234067 - 7234029
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtc 197  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  7234067 ctagaattcacctttttcaaggtgaataagtggggtgtc 7234029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 201
Target Start/End: Original strand, 8253596 - 8253626
Alignment:
Q  171 tttttcaaggtgaataagtggggtgtctggg 201  Q
    |||||||||||||||||||||||||||||||    
T  8253596 tttttcaaggtgaataagtggggtgtctggg 8253626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 25064684 - 25064741
Alignment:
Q  181 tgaataagtggggtgtctggggtttgaaccccgacccct--acataataatgcatgtc 236  Q
    |||| ||||||||||||||||||| ||||||| ||||||  | |||||||||||||||    
T  25064684 tgaagaagtggggtgtctggggttcgaaccccaacccctgcatataataatgcatgtc 25064741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 2945674 - 2945633
Alignment:
Q  183 aataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||||||| | ||||||||||||||||||| ||||    
T  2945674 aataagtggggtgtccgaggtttgaaccccgacccctgcata 2945633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 6455555 - 6455502
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaacccc 212  Q
    ||||||||||  ||||||||||||||||||| ||||||| || ||| |||||||    
T  6455555 ctagaattcatctttttcaaggtgaataagtagggtgtccggagttcgaacccc 6455502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 9064944 - 9064903
Alignment:
Q  183 aataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||||||| |||||||| ||||| ||||    
T  9064944 aataagtggggtgtctggggttcgaaccccggcccctgcata 9064903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 30938480 - 30938439
Alignment:
Q  172 ttttcaaggtgaataagtggggtgtctggggtttgaaccccg 213  Q
    ||||||||| |||||||| |||||||||||||| ||||||||    
T  30938480 ttttcaaggagaataagtagggtgtctggggttcgaaccccg 30938439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 34524977 - 34524912
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  |||||| |||||||||||||||||||  |||| | |||||||| ||||| ||||    
T  34524977 ctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcata 34524912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 3294848 - 3294804
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||| |||||||||||| |||||| |||||||||||||| ||||    
T  3294848 gtgaagaagtggggtgtccggggttcgaaccccgacccctgcata 3294804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 6144045 - 6144002
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  6144045 gtgaataagtggggtgtccggggttcgaa-cccgacccctacata 6144002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 7374044 - 7374108
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||| | |||||| ||||||||||||||||||||  || ||| |||| ||||||| ||||||    
T  7374044 tagaatttatattttttaaggtgaataagtggggtgttcggagttcgaactccgacccatacata 7374108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 1141 - 1076
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  1141 ctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacata 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 67263 - 67198
Alignment:
Q  159 ctagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    ||||||||||  ||||||||||||| |||||||||||||  ||||| |||||||  ||||||||||    
T  67263 ctagaattcacttttttcaaggtgattaagtggggtgtccagggttcgaaccccagcccctacata 67198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 236347 - 236390
Alignment:
Q  184 ataagtggggtgtctggggtttgaaccccgacccctacataata 227  Q
    |||||||||||||| |||||| |||||||||||||| |||||||    
T  236347 ataagtggggtgtccggggttcgaaccccgacccctgcataata 236390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 440500 - 440423
Alignment:
Q  160 tagaattcagatttttcaaggtgaataagtggggtgtctggggtttgaaccccgacccctac--ataataatgcatgt 235  Q
    |||||||||  ||||| ||||||||||||||||||||  |||  | |||||||| |||||||  ||||||||||||||    
T  440500 tagaattcaccttttttaaggtgaataagtggggtgttcgggagtcgaaccccggcccctacatataataatgcatgt 440423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 6643 - 6691
Alignment:
Q  176 caaggtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||| ||||||||| |||||| |||||||| ||||| ||||    
T  6643 caaggtgaataattggggtgtccggggttcgaaccccggcccctgcata 6691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 4404 - 4360
Alignment:
Q  180 gtgaataagtggggtgtctggggtttgaaccccgacccctacata 224  Q
    |||||||||||| ||||| |||||| |||||||||||||| ||||    
T  4404 gtgaataagtggagtgtccggggttcgaaccccgacccctgcata 4360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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