View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9877_low_11 (Length: 259)
Name: NF9877_low_11
Description: NF9877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9877_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 8 - 164
Target Start/End: Original strand, 7609941 - 7610096
Alignment:
| Q |
8 |
ttggtggtgatgtgcttgatcgatgaaattgtttctagaaaagaattataactcaacttatcacaaagaagctaaccacattttcttttcctctttagtc |
107 |
Q |
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| T |
7609941 |
ttggtggtgatgtgcttgatcgatgaaattgtttctagaaaagaattataactcaacttatcacaaagaagctaaccacattttcatttcctc-ttagtc |
7610039 |
T |
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| Q |
108 |
ttccaaagggagaattatgtggaagttttttattgctagcttcattcacacctagga |
164 |
Q |
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| T |
7610040 |
ttccaaagggagaattatgtggaagttttttattgctagcttcattcacacctagga |
7610096 |
T |
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