View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9879_high_106 (Length: 201)
Name: NF9879_high_106
Description: NF9879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9879_high_106 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 7447159 - 7446965
Alignment:
| Q |
1 |
tcatatccgttatcaacaccaaattcaccaagaaaaggtgggtccacaacttccactgactgagacatggatgaagtacttgaactgctgcttgttaccc |
100 |
Q |
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| T |
7447159 |
tcatatccgttatcaacaccaaattcaccaagaaaaggtgggtccacaacttccactgactgagacatggatgaagtacttgaactgctgcttgttaccc |
7447060 |
T |
|
| Q |
101 |
tttcaaatggctctcgaagcctttgaatttctttctcagcttctgagagttgctcccttagctttaatgcttctgagtgttgctccctttgctac |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
7447059 |
tttcaaatggctctcgaagcctttgaatttctttctcagcttctgagagttgctcccttagctttaatgcttctgagtgttgctcccttagctac |
7446965 |
T |
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