View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9879_low_116 (Length: 240)
Name: NF9879_low_116
Description: NF9879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9879_low_116 |
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Alignment Details
Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 56400769 - 56400652
Alignment:
| Q |
17 |
acatcaaacattgcttcagtaagaatattttccaataaggcttttaaaccacgtgcacccgtgttcttcgccatcgctttctttgcaatcaatctcaaag |
116 |
Q |
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| T |
56400769 |
acatcaaacattgcttcagtaagaatattttccaataaggcttttaaaccacgtgcacccgtgttcttcaccgtcgctttctttgcaatcaatctcaaag |
56400670 |
T |
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| Q |
117 |
cattatcagtaaaatgca |
134 |
Q |
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| T |
56400669 |
cattatcagtaaaatgca |
56400652 |
T |
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