View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9879_low_92 (Length: 250)
Name: NF9879_low_92
Description: NF9879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9879_low_92 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 42 - 237
Target Start/End: Original strand, 23094049 - 23094244
Alignment:
| Q |
42 |
tattgttgttgtcttacccttattctctttttatcatttgtctccaatattttaattctaaacattttccatatgtcgtaggcgtgtgacaagcctaatt |
141 |
Q |
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| T |
23094049 |
tattgttgttgtcttacccttattctctttttatcatttgtctccaatattttaattctaaacattttccatatgttgtaggtgtgtgacaagcctaatt |
23094148 |
T |
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| Q |
142 |
aaagagtggtccttctaagaatgataggtagtgctaacaatattatatctttggttttatttagttggaattggatatttagtaactattcttcct |
237 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23094149 |
aaagagtggtccttctaagaatgataggtagtgctaacaatattatatctttggttttatttagttggaattggatatttagtaactattcttcct |
23094244 |
T |
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