View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9880_low_3 (Length: 454)

Name: NF9880_low_3
Description: NF9880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9880_low_3
NF9880_low_3
[»] chr3 (64 HSPs)
chr3 (217-435)||(52079642-52079860)
chr3 (107-214)||(52080650-52080757)
chr3 (107-218)||(6223549-6223660)
chr3 (1-110)||(29801856-29801965)
chr3 (1-113)||(30104475-30104587)
chr3 (1-109)||(5137421-5137529)
chr3 (1-108)||(31779092-31779199)
chr3 (1-107)||(23644461-23644567)
chr3 (1-107)||(30098203-30098309)
chr3 (1-107)||(39555577-39555683)
chr3 (1-106)||(39556017-39556122)
chr3 (1-112)||(24300996-24301107)
chr3 (1-107)||(27393660-27393766)
chr3 (1-111)||(43973880-43973990)
chr3 (1-106)||(25853234-25853339)
chr3 (1-106)||(43973441-43973546)
chr3 (1-109)||(20840557-20840665)
chr3 (1-108)||(5136978-5137085)
chr3 (1-112)||(23644905-23645016)
chr3 (1-104)||(25420581-25420684)
chr3 (1-108)||(26837358-26837465)
chr3 (1-112)||(37727370-37727481)
chr3 (1-107)||(20841001-20841107)
chr3 (1-103)||(26274570-26274672)
chr3 (1-107)||(27394017-27394123)
chr3 (1-107)||(31778652-31778758)
chr3 (1-103)||(32534962-32535064)
chr3 (1-107)||(37726928-37727034)
chr3 (1-114)||(4275804-4275917)
chr3 (1-109)||(17464488-17464596)
chr3 (12-112)||(32535414-32535514)
chr3 (1-109)||(48452986-48453094)
chr3 (1-104)||(25853667-25853770)
chr3 (1-112)||(51474774-51474885)
chr3 (1-103)||(25612417-25612519)
chr3 (1-103)||(41046703-41046805)
chr3 (1-108)||(45965936-45966043)
chr3 (3-106)||(50116851-50116954)
chr3 (1-111)||(22424809-22424919)
chr3 (3-105)||(51473429-51473531)
chr3 (1-106)||(23228448-23228552)
chr3 (1-106)||(29801356-29801461)
chr3 (3-108)||(37220555-37220660)
chr3 (123-218)||(6182703-6182798)
chr3 (123-218)||(6222878-6222973)
chr3 (1-112)||(26837796-26837906)
chr3 (1-107)||(17464932-17465038)
chr3 (1-102)||(22425253-22425354)
chr3 (1-105)||(32697140-32697244)
chr3 (4-110)||(26275009-26275115)
chr3 (31-108)||(37222041-37222118)
chr3 (3-103)||(32695706-32695806)
chr3 (1-52)||(18010185-18010236)
chr3 (3-56)||(24300606-24300659)
chr3 (45-110)||(40489473-40489538)
chr3 (53-108)||(49720369-49720424)
chr3 (1-79)||(41047139-41047216)
chr3 (72-110)||(49407792-49407830)
chr3 (72-110)||(50901039-50901077)
chr3 (58-107)||(46013421-46013470)
chr3 (72-109)||(52375843-52375880)
chr3 (75-107)||(25611497-25611529)
chr3 (72-108)||(40838650-40838686)
chr3 (76-112)||(55390113-55390149)
[»] chr7 (32 HSPs)
chr7 (1-108)||(32004612-32004719)
chr7 (1-107)||(37786766-37786872)
chr7 (1-111)||(38859081-38859191)
chr7 (1-106)||(35288903-35289008)
chr7 (1-108)||(35289341-35289448)
chr7 (1-111)||(19590965-19591075)
chr7 (1-114)||(2658831-2658944)
chr7 (1-106)||(19590525-19590630)
chr7 (1-109)||(23952727-23952836)
chr7 (1-110)||(38160947-38161056)
chr7 (1-108)||(19830418-19830525)
chr7 (1-108)||(28583437-28583544)
chr7 (1-108)||(34534231-34534338)
chr7 (1-107)||(19830859-19830965)
chr7 (1-93)||(29099863-29099955)
chr7 (1-108)||(4478140-4478247)
chr7 (1-108)||(34533789-34533896)
chr7 (1-103)||(29100291-29100393)
chr7 (1-111)||(37787207-37787317)
chr7 (1-109)||(2659280-2659388)
chr7 (1-103)||(4641443-4641545)
chr7 (1-107)||(38858642-38858748)
chr7 (1-100)||(23953169-23953268)
chr7 (1-106)||(32005054-32005159)
chr7 (5-105)||(28584366-28584466)
chr7 (2-103)||(4641885-4641983)
chr7 (72-107)||(39137045-39137080)
chr7 (72-111)||(39136681-39136720)
chr7 (72-107)||(49064033-49064068)
chr7 (72-108)||(5333878-5333914)
chr7 (55-107)||(9181907-9181959)
chr7 (53-109)||(25637194-25637250)
[»] chr8 (32 HSPs)
chr8 (1-112)||(34540988-34541099)
chr8 (1-113)||(41681127-41681239)
chr8 (1-107)||(9930097-9930203)
chr8 (1-110)||(19176730-19176839)
chr8 (1-114)||(44831239-44831352)
chr8 (1-109)||(19176287-19176395)
chr8 (1-105)||(31133660-31133764)
chr8 (1-103)||(9928912-9929014)
chr8 (1-107)||(11656897-11657003)
chr8 (1-107)||(13225079-13225185)
chr8 (1-111)||(9178075-9178185)
chr8 (1-111)||(11656450-11656560)
chr8 (1-103)||(33328161-33328263)
chr8 (1-110)||(12571859-12571968)
chr8 (1-106)||(41681574-41681679)
chr8 (1-108)||(31133218-31133325)
chr8 (1-110)||(33742918-33743026)
chr8 (1-108)||(11336962-11337069)
chr8 (1-109)||(44831685-44831793)
chr8 (1-104)||(33328580-33328683)
chr8 (1-103)||(12572291-12572393)
chr8 (1-108)||(4629795-4629902)
chr8 (1-107)||(8073992-8074097)
chr8 (1-111)||(10918121-10918231)
chr8 (5-102)||(13224645-13224741)
chr8 (16-103)||(4630241-4630328)
chr8 (1-54)||(33743359-33743412)
chr8 (56-107)||(10919681-10919732)
chr8 (61-114)||(15256332-15256385)
chr8 (72-109)||(35427324-35427361)
chr8 (72-112)||(6115623-6115663)
chr8 (53-109)||(15255850-15255906)
[»] chr5 (43 HSPs)
chr5 (1-111)||(8647878-8647988)
chr5 (1-112)||(18183409-18183520)
chr5 (1-109)||(14215683-14215791)
chr5 (1-104)||(2864756-2864859)
chr5 (1-104)||(15371873-15371975)
chr5 (1-115)||(15372313-15372427)
chr5 (1-106)||(8647438-8647543)
chr5 (1-108)||(2865195-2865302)
chr5 (5-108)||(19359580-19359683)
chr5 (1-108)||(24362276-24362383)
chr5 (1-107)||(29455182-29455288)
chr5 (1-106)||(5819369-5819474)
chr5 (1-108)||(5818927-5819034)
chr5 (1-108)||(8460928-8461035)
chr5 (1-107)||(8461371-8461477)
chr5 (1-106)||(19359136-19359241)
chr5 (2-110)||(15708967-15709075)
chr5 (1-110)||(24331555-24331666)
chr5 (1-108)||(18182968-18183075)
chr5 (1-106)||(164191-164295)
chr5 (1-112)||(164631-164742)
chr5 (1-107)||(25000529-25000635)
chr5 (9-106)||(4623148-4623245)
chr5 (3-106)||(7349459-7349562)
chr5 (1-107)||(16018588-16018693)
chr5 (1-107)||(29454739-29454845)
chr5 (1-104)||(14215243-14215346)
chr5 (5-108)||(16019031-16019134)
chr5 (1-100)||(24361843-24361942)
chr5 (1-105)||(4222162-4222266)
chr5 (1-108)||(14463960-14464067)
chr5 (1-100)||(24325218-24325317)
chr5 (1-106)||(4219663-4219768)
chr5 (1-111)||(15709409-15709518)
chr5 (3-106)||(7348559-7348662)
chr5 (25-111)||(21371161-21371247)
chr5 (1-84)||(25000112-25000195)
chr5 (3-105)||(6018315-6018416)
chr5 (1-64)||(6019211-6019274)
chr5 (1-87)||(4624665-4624751)
chr5 (1-104)||(24332001-24332107)
chr5 (72-109)||(15115604-15115641)
chr5 (59-107)||(28289683-28289731)
[»] chr1 (41 HSPs)
chr1 (1-107)||(39154460-39154566)
chr1 (1-113)||(29870059-29870171)
chr1 (1-107)||(15646635-15646741)
chr1 (1-107)||(18984559-18984665)
chr1 (1-107)||(50970718-50970824)
chr1 (1-110)||(21856038-21856147)
chr1 (1-106)||(29307382-29307487)
chr1 (1-105)||(4636411-4636515)
chr1 (5-105)||(5539817-5539917)
chr1 (1-105)||(8678542-8678646)
chr1 (1-108)||(18984117-18984224)
chr1 (1-108)||(26859499-26859606)
chr1 (1-106)||(21856483-21856588)
chr1 (1-106)||(29306953-29307058)
chr1 (1-108)||(15173534-15173640)
chr1 (1-108)||(15646190-15646297)
chr1 (1-104)||(33144359-33144462)
chr1 (1-108)||(50970276-50970383)
chr1 (1-107)||(5540258-5540364)
chr1 (1-111)||(26859054-26859164)
chr1 (1-106)||(8678981-8679086)
chr1 (1-110)||(9018969-9019078)
chr1 (1-110)||(9019403-9019512)
chr1 (1-106)||(17433216-17433321)
chr1 (3-107)||(52268289-52268393)
chr1 (1-104)||(17433655-17433758)
chr1 (1-107)||(29869619-29869725)
chr1 (2-98)||(33143925-33144021)
chr1 (1-103)||(5963018-5963120)
chr1 (3-104)||(52269190-52269291)
chr1 (1-104)||(39154021-39154124)
chr1 (1-103)||(15173099-15173201)
chr1 (20-111)||(2733416-2733507)
chr1 (1-106)||(17112282-17112386)
chr1 (1-105)||(5962579-5962683)
chr1 (6-98)||(47827033-47827125)
chr1 (45-108)||(52235153-52235216)
chr1 (31-104)||(47826966-47827039)
chr1 (55-105)||(44954721-44954771)
chr1 (74-111)||(8229632-8229669)
chr1 (72-112)||(44802683-44802723)
[»] scaffold0417 (2 HSPs)
scaffold0417 (1-106)||(11063-11168)
scaffold0417 (1-87)||(10640-10726)
[»] chr6 (37 HSPs)
chr6 (1-110)||(22219793-22219902)
chr6 (1-109)||(12935154-12935262)
chr6 (1-112)||(10900370-10900481)
chr6 (1-108)||(20741098-20741205)
chr6 (1-110)||(11445427-11445536)
chr6 (1-108)||(18257135-18257242)
chr6 (1-108)||(23075568-23075675)
chr6 (1-111)||(11444982-11445092)
chr6 (18-115)||(1149456-1149553)
chr6 (1-106)||(4811696-4811801)
chr6 (1-110)||(28472633-28472742)
chr6 (1-110)||(29859822-29859931)
chr6 (1-109)||(2319669-2319777)
chr6 (1-105)||(18505359-18505463)
chr6 (1-103)||(10899942-10900044)
chr6 (1-107)||(15828081-15828187)
chr6 (9-107)||(20741552-20741650)
chr6 (1-106)||(11277022-11277127)
chr6 (1-106)||(18257577-18257682)
chr6 (3-104)||(29033436-29033537)
chr6 (9-107)||(23073998-23074096)
chr6 (1-106)||(1149872-1149977)
chr6 (1-110)||(31470756-31470865)
chr6 (1-108)||(12935597-12935704)
chr6 (1-107)||(11276589-11276695)
chr6 (1-103)||(18504922-18505024)
chr6 (1-107)||(31470314-31470420)
chr6 (1-112)||(18296139-18296250)
chr6 (1-105)||(15827639-15827745)
chr6 (1-104)||(29035077-29035180)
chr6 (1-103)||(2322658-2322760)
chr6 (1-103)||(3835166-3835268)
chr6 (1-106)||(4811372-4811477)
chr6 (45-110)||(31242802-31242867)
chr6 (50-106)||(22534214-22534270)
chr6 (72-116)||(30251204-30251248)
chr6 (59-111)||(5120968-5121020)
[»] chr4 (58 HSPs)
chr4 (1-106)||(25447247-25447352)
chr4 (1-106)||(46193405-46193510)
chr4 (1-109)||(23494883-23494991)
chr4 (1-104)||(2118295-2118398)
chr4 (1-108)||(33109904-33110011)
chr4 (1-111)||(4219999-4220109)
chr4 (1-107)||(22170377-22170482)
chr4 (1-104)||(46193845-46193948)
chr4 (1-108)||(51021236-51021342)
chr4 (1-111)||(25937665-25937775)
chr4 (1-107)||(25938111-25938217)
chr4 (1-107)||(48526195-48526301)
chr4 (1-106)||(12234769-12234874)
chr4 (1-112)||(11153587-11153698)
chr4 (1-108)||(15523233-15523340)
chr4 (1-108)||(25447676-25447783)
chr4 (1-107)||(15523674-15523780)
chr4 (5-111)||(22434174-22434280)
chr4 (1-110)||(20958299-20958408)
chr4 (1-106)||(45082864-45082969)
chr4 (1-109)||(20470951-20471059)
chr4 (1-108)||(48293592-48293699)
chr4 (1-103)||(18751602-18751704)
chr4 (1-109)||(12234326-12234434)
chr4 (1-109)||(18763960-18764068)
chr4 (1-104)||(33109686-33109789)
chr4 (1-108)||(48708293-48708400)
chr4 (1-108)||(48713786-48713893)
chr4 (1-112)||(51020791-51020902)
chr4 (1-108)||(54995067-54995174)
chr4 (1-103)||(2118735-2118837)
chr4 (1-107)||(11153145-11153251)
chr4 (3-107)||(10258329-10258433)
chr4 (1-104)||(4219559-4219662)
chr4 (1-104)||(23494445-23494548)
chr4 (1-104)||(38962259-38962362)
chr4 (1-108)||(54995508-54995614)
chr4 (1-87)||(12503455-12503541)
chr4 (1-106)||(35363040-35363146)
chr4 (1-103)||(48526621-48526723)
chr4 (1-106)||(16691512-16691616)
chr4 (1-110)||(22434617-22434725)
chr4 (1-106)||(48294983-48295088)
chr4 (1-103)||(16690939-16691041)
chr4 (1-87)||(43243720-43243806)
chr4 (8-106)||(55189528-55189626)
chr4 (39-107)||(16318254-16318322)
chr4 (1-105)||(44892588-44892692)
chr4 (1-53)||(45082484-45082536)
chr4 (1-49)||(20957246-20957294)
chr4 (1-105)||(44890518-44890622)
chr4 (1-48)||(43242328-43242375)
chr4 (53-112)||(55677451-55677510)
chr4 (58-112)||(12593521-12593575)
chr4 (72-108)||(229159-229195)
chr4 (1-37)||(12503876-12503912)
chr4 (1-45)||(44220817-44220861)
chr4 (72-112)||(45838541-45838581)
[»] chr2 (42 HSPs)
chr2 (1-112)||(7446786-7446897)
chr2 (1-112)||(18451271-18451382)
chr2 (1-108)||(22374765-22374872)
chr2 (1-107)||(7446341-7446447)
chr2 (1-111)||(26538519-26538629)
chr2 (4-105)||(239795-239896)
chr2 (1-110)||(43058773-43058881)
chr2 (1-108)||(1978549-1978656)
chr2 (1-108)||(22374318-22374425)
chr2 (1-107)||(28617054-28617160)
chr2 (1-103)||(40027580-40027682)
chr2 (1-106)||(35779708-35779813)
chr2 (3-111)||(28616608-28616716)
chr2 (1-108)||(1978106-1978213)
chr2 (1-108)||(11090519-11090626)
chr2 (1-104)||(40815347-40815450)
chr2 (1-103)||(14432145-14432247)
chr2 (1-107)||(18450829-18450935)
chr2 (1-107)||(40027139-40027245)
chr2 (1-106)||(43058333-43058438)
chr2 (1-109)||(239350-239457)
chr2 (3-111)||(20440473-20440581)
chr2 (3-107)||(20444748-20444852)
chr2 (1-105)||(35781103-35781207)
chr2 (5-108)||(11090964-11091067)
chr2 (1-108)||(28847135-28847242)
chr2 (1-107)||(26538096-26538202)
chr2 (1-111)||(40815785-40815895)
chr2 (1-111)||(14432581-14432691)
chr2 (1-109)||(3025463-3025571)
chr2 (1-112)||(3025903-3026012)
chr2 (1-103)||(8425800-8425902)
chr2 (1-104)||(8972239-8972342)
chr2 (1-104)||(15551501-15551604)
chr2 (5-104)||(15552498-15552596)
chr2 (1-103)||(8425358-8425459)
chr2 (40-103)||(3822924-3822987)
chr2 (53-112)||(38007944-38008003)
chr2 (23-112)||(20128200-20128289)
chr2 (58-106)||(4355755-4355803)
chr2 (53-105)||(16953427-16953479)
chr2 (53-109)||(25336093-25336149)
[»] scaffold0007 (4 HSPs)
scaffold0007 (1-107)||(64301-64407)
scaffold0007 (1-103)||(64745-64847)
scaffold0007 (72-109)||(205355-205392)
scaffold0007 (50-107)||(210827-210884)
[»] scaffold0951 (2 HSPs)
scaffold0951 (1-109)||(2107-2215)
scaffold0951 (1-108)||(1665-1772)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-109)||(4790-4898)
scaffold0295 (1-104)||(5231-5334)
[»] scaffold1585 (1 HSPs)
scaffold1585 (5-105)||(568-668)
[»] scaffold1223 (2 HSPs)
scaffold1223 (2-106)||(1182-1286)
scaffold1223 (1-104)||(755-857)
[»] scaffold0273 (2 HSPs)
scaffold0273 (1-108)||(4647-4754)
scaffold0273 (1-56)||(4253-4308)
[»] scaffold0176 (2 HSPs)
scaffold0176 (9-111)||(19069-19171)
scaffold0176 (1-107)||(18834-18940)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-110)||(42598-42707)
scaffold0027 (1-103)||(42172-42274)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-110)||(134113-134222)
[»] scaffold0113 (1 HSPs)
scaffold0113 (3-107)||(28685-28789)
[»] scaffold0432 (2 HSPs)
scaffold0432 (1-103)||(10312-10414)
scaffold0432 (1-103)||(9935-10037)
[»] scaffold0157 (2 HSPs)
scaffold0157 (1-87)||(16936-17022)
scaffold0157 (1-37)||(16565-16601)
[»] scaffold0076 (1 HSPs)
scaffold0076 (3-103)||(8451-8551)
[»] scaffold0057 (2 HSPs)
scaffold0057 (6-103)||(61903-62000)
scaffold0057 (32-108)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (1-102)||(454-554)
[»] scaffold1432 (1 HSPs)
scaffold1432 (73-109)||(578-614)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-56)||(7728-7783)


Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 217 - 435
Target Start/End: Complemental strand, 52079860 - 52079642
Alignment:
Q  217 ttatcatttctgaagcataaaagtagagtcttcgtgcaccaaaatctgtgttctggttccgtgtttcattcgtaaattccgaaatcttcccatagcctaa 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52079860 ttatcatttctgaagcataaaagtagagtcttcgtgcaccaaaatctgtgttctggttccgtgtttcattcgtaaattccgaaatcttcccatagcctaa 52079761  T
Q  317 ttcccgtaacctttgtaatcactctctctaatttaatcttctctttctctattttccttaagattaggtcgtagaataacattctgttggattcattttt 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52079760 ttcccgtaacctttgtaatcactctctctaatttaatcttctctttctctattttcctgaagattaggtcgtagaataacattctgttggattcattttt 52079661  T
Q  417 gttttaacgacatgacaac 435  Q
    |||||||||||||||||||    
T  52079660 gttttaacgacatgacaac 52079642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 52080757 - 52080650
Alignment:
Q  107 taaaaatttcacaccatttcacttctttaggtgacgtggataaattgtacagatgtcatattttaatttgaaaacagcaaaaactgtaggtatggaactg 206  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52080757 taaaaatttcacaccgtttcacttctttaggtgacgtggataaattgtacagatgtcatattttaatttgaaaacagcaaaaactgtaggtatggaactg 52080658  T
Q  207 tgcataag 214  Q
    ||||||||    
T  52080657 tgcataag 52080650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 6223549 - 6223660
Alignment:
Q  107 taaaaatttcacaccatttcacttctttaggtgacgtggataaattgtacagatgtcatattttaatttgaaaacagcaaaaactgtaggtatggaactg 206  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6223549 taaaaatttcacaccgtttcacttcttcaggtgacgtggataaattgtacagatgtcatgttttaatttgaaaacagcaaaaactgtaggtatggaactg 6223648  T
Q  207 tgcataagtttt 218  Q
    ||||||||||||    
T  6223649 tgcataagtttt 6223660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29801856 - 29801965
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| || |||| | |||||| ||||||||||||||||||||||||||    
T  29801856 aatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaat 29801955  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  29801956 taagcctaaa 29801965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 30104587 - 30104475
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| || | || |||||||||||||||||| ||||||| | |||||||||||| ||||||| ||||||||||||    
T  30104587 aatgcaacaaaaatgataattgaaggaccgttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaat 30104488  T
Q  101 taagcctaaaaat 113  Q
    |||||||||||||    
T  30104487 taagcctaaaaat 30104475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 5137421 - 5137529
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||| | || |||||| |||||| ||||| ||||||| ||||||||||||    
T  5137421 aatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaat 5137520  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  5137521 taagcctaa 5137529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31779092 - 31779199
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  31779092 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 31779191  T
Q  101 taagccta 108  Q
    ||||||||    
T  31779192 taagccta 31779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23644567 - 23644461
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||| ||||||| ||||||| | |||||| ||||||||||||| ||||||||||||    
T  23644567 aatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaat 23644468  T
Q  101 taagcct 107  Q
    |||||||    
T  23644467 taagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 30098203 - 30098309
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || |||| | |||| ||||||| ||||||| ||||||||||||    
T  30098203 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaat 30098302  T
Q  101 taagcct 107  Q
    |||||||    
T  30098303 taagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 39555683 - 39555577
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  39555683 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 39555584  T
Q  101 taagcct 107  Q
    |||||||    
T  39555583 taagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 39556017 - 39556122
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  39556017 aatgcaacgaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 39556116  T
Q  101 taagcc 106  Q
    ||||||    
T  39556117 taagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 24300996 - 24301107
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| | |||||||| ||||||| |||||||||| ||||||| ||||||| | |||||| ||||| ||||||| ||||||||||||    
T  24300996 aatgcaacaaaaatgatactcgaaggaccgttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 24301095  T
Q  101 taagcctaaaaa 112  Q
    ||||||||||||    
T  24301096 taagcctaaaaa 24301107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27393766 - 27393660
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| || |||  | |||||||||||| ||||||| ||||||||||||    
T  27393766 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaat 27393667  T
Q  101 taagcct 107  Q
    |||||||    
T  27393666 taagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 43973880 - 43973990
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||| | || |||| | |||||| ||||| ||||||| ||||||||||||    
T  43973880 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 43973979  T
Q  101 taagcctaaaa 111  Q
    |||||||||||    
T  43973980 taagcctaaaa 43973990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25853339 - 25853234
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||||||||| || ||||||| | |||||| ||||| ||||||| ||||||||||||    
T  25853339 aatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 25853240  T
Q  101 taagcc 106  Q
    ||||||    
T  25853239 taagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43973546 - 43973441
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||  |||| |||| | |||||| ||||| ||||||| ||||||||||||    
T  43973546 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaat 43973447  T
Q  101 taagcc 106  Q
    ||||||    
T  43973446 taagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20840665 - 20840557
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  20840665 aatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 20840566  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  20840565 taagcctaa 20840557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5137085 - 5136978
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || ||||||| | ||| || ||||| ||||||| ||||||||||||    
T  5137085 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaat 5136986  T
Q  101 taagccta 108  Q
    ||| ||||    
T  5136985 taaaccta 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 23644905 - 23645016
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||| ||||||| | |||||| ||||| ||||||| ||||||| ||||    
T  23644905 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataat 23645004  T
Q  101 taagcctaaaaa 112  Q
    |||||| |||||    
T  23645005 taagccgaaaaa 23645016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25420581 - 25420684
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||| ||||||||||||| ||||| || | ||||||||||||  |||||||||| | ||||||||||||||||| |||||||||||||||    
T  25420581 aatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtgagtaggtcaaaatacgatgatcaaaagtgtaat 25420680  T
Q  101 taag 104  Q
    ||||    
T  25420681 taag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26837465 - 26837358
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||| ||||||| | |||||| |||||||| |||| ||||| ||||||    
T  26837465 aatgcaacaaaaatgataattgaaggaccgtttcgttatgttataaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaat 26837366  T
Q  101 taagccta 108  Q
    ||| ||||    
T  26837365 taaaccta 26837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 37727370 - 37727481
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| || |||| | |||||| ||||| | ||||| ||||||||||||    
T  37727370 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaat 37727469  T
Q  101 taagcctaaaaa 112  Q
    |||||| |||||    
T  37727470 taagccaaaaaa 37727481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20841001 - 20841107
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| || |||| | |||||| ||||| ||||| | ||||||||||||    
T  20841001 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaat 20841100  T
Q  101 taagcct 107  Q
    |||||||    
T  20841101 taagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 26274672 - 26274570
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||  |||||||| |||||||||| ||||||    
T  26274672 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaat 26274573  T
Q  101 taa 103  Q
    |||    
T  26274572 taa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 27394017 - 27394123
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||||| ||||||| | ||||| | |||||| ||||| ||||||| ||||||||||||    
T  27394017 aatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 27394116  T
Q  101 taagcct 107  Q
    |||||||    
T  27394117 taagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 31778758 - 31778652
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||  |||||||| ||||||| |||||||||||||||||| || |||||| |||||  ||||| ||||||| ||||||||||||    
T  31778758 aatgcaacaaaaatgataaacgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaat 31778659  T
Q  101 taagcct 107  Q
    |||||||    
T  31778658 taagcct 31778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32535064 - 32534962
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||||||| | |||| | ||||| ||||||| ||||||||||||    
T  32535064 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaat 32534965  T
Q  101 taa 103  Q
    |||    
T  32534964 taa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 37727034 - 37726928
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| | || |||| | || ||  ||||| ||||||| ||||||||||||    
T  37727034 aatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaat 37726935  T
Q  101 taagcct 107  Q
    |||||||    
T  37726934 taagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4275804 - 4275917
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||| || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  4275804 aatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 4275903  T
Q  101 taagcctaaaaatt 114  Q
    |||||||| |||||    
T  4275904 taagcctataaatt 4275917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17464596 - 17464488
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || ||||   | |||| ||||| ||||||| ||||||||||||    
T  17464596 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaat 17464497  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  17464496 taagcctaa 17464488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 32535414 - 32535514
Alignment:
Q  12 aatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaaa 111  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| |||||||||||||||||| ||||    
T  32535414 aatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaaaaa 32535513  T
Q  112 a 112  Q
    |    
T  32535514 a 32535514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 48453094 - 48452986
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| || |||| | |||||| ||||| |||| || ||||||||||||    
T  48453094 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaat 48452995  T
Q  101 taagcctaa 109  Q
     ||||||||    
T  48452994 caagcctaa 48452986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25853667 - 25853770
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | || || || |||| | |||||  ||||| ||||||||||||||||||||    
T  25853667 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaat 25853766  T
Q  101 taag 104  Q
    ||||    
T  25853767 taag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 51474774 - 51474885
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||||||||| || ||||||| | |||| | ||||| ||| | | ||||||||||||    
T  51474774 aatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaacacgggaaccaaaagtgtaat 51474873  T
Q  101 taagcctaaaaa 112  Q
    ||||||||||||    
T  51474874 taagcctaaaaa 51474885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25612417 - 25612519
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||| || |||  ||||||| | |||||||||||||||| ||||||| | |||||||||||| ||||||| ||||||||||||    
T  25612417 aatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaat 25612516  T
Q  101 taa 103  Q
    |||    
T  25612517 taa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 41046805 - 41046703
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | | |||| ||||| ||||||| ||||||||||||    
T  41046805 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaat 41046706  T
Q  101 taa 103  Q
    |||    
T  41046705 taa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 45966043 - 45965936
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||| |||||||||| |||||||  ||||||||||||||||||| ||||||| || ||| | |||| | ||||| ||||||| ||||||||||||    
T  45966043 aatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaacacgaggaccaaaagtgtaat 45965944  T
Q  101 taagccta 108  Q
    ||||||||    
T  45965943 taagccta 45965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 50116851 - 50116954
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||| |||| |||| ||||||| | ||| ||||||||| || ||||||| | |||| ||||||| ||||||||||||||||||||||    
T  50116851 tgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaacacgaggatcaaaagtgtaatta 50116950  T
Q  103 agcc 106  Q
    ||||    
T  50116951 agcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22424919 - 22424809
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| | || |||| | ||||||   ||| ||||| | ||||||||||||    
T  22424919 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaat 22424820  T
Q  101 taagcctaaaa 111  Q
    |||||||||||    
T  22424819 taagcctaaaa 22424809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 51473531 - 51473429
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    |||||||||||||||||  ||||||| |||||||| |||||||||||||||||| ||||||| | | |||  ||||| ||||||| ||||||||||||||    
T  51473531 tgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaaaagtgtaatta 51473432  T
Q  103 agc 105  Q
    |||    
T  51473431 agc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23228448 - 23228552
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| |||||||||||||||||||| ||||||||  |||||||||||||| ||||| |||| | |||||| ||||| ||| ||| ||||||||||||    
T  23228448 aatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgtgagtaggccaaaacacggggaccaaaagtgtaat 23228546  T
Q  101 taagcc 106  Q
    ||||||    
T  23228547 taagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 29801461 - 29801356
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||| || |||  | |||| | ||||| |||| || ||||||||||||    
T  29801461 aatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacgatgaccaaaagtgtaat 29801362  T
Q  101 taagcc 106  Q
    ||||||    
T  29801361 taagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 37220660 - 37220555
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||| |||||||| ||||| || ||||||||||| ||| |||| || |  | |||||| ||||||||||||| ||||||||||||||    
T  37220660 tgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggaccaaaagtgtaatta 37220561  T
Q  103 agccta 108  Q
    ||||||    
T  37220560 agccta 37220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 6182798 - 6182703
Alignment:
Q  123 tttcacttctttaggtgacgtggataaattgtacagatgtcatattttaatttgaaaacagcaaaaactgtaggtatggaactgtgcataagtttt 218  Q
    ||||||| | |||| |||||||||||| ||||||||||||||  |||| ||||||||| ||||||||| | ||||||| |||||||||||||||||    
T  6182798 tttcactacgttagctgacgtggataagttgtacagatgtcacgttttgatttgaaaatagcaaaaacagcaggtatgaaactgtgcataagtttt 6182703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 6222973 - 6222878
Alignment:
Q  123 tttcacttctttaggtgacgtggataaattgtacagatgtcatattttaatttgaaaacagcaaaaactgtaggtatggaactgtgcataagtttt 218  Q
    ||||||| | |||| |||||||||||| ||||||||||||||  |||| ||||||||| ||||||||| | ||||||| |||||||||||||||||    
T  6222973 tttcactacgttagctgacgtggataagttgtacagatgtcacgttttgatttgaaaatagcaaaaacagcaggtatgaaactgtgcataagtttt 6222878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 26837796 - 26837906
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| ||||| |||| ||||||| | ||||||| |||||| | || |||| | |||||| ||||| ||||||| ||||||||||||    
T  26837796 aatgcaacaaaaatgatacttgaatgaccgttttgttctattttaaa-gggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaat 26837894  T
Q  101 taagcctaaaaa 112  Q
    ||||||||||||    
T  26837895 taagcctaaaaa 26837906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 17464932 - 17465038
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||   || || ||||||  ||||| ||||| ||||||| ||||| ||||||    
T  17464932 aatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaat 17465031  T
Q  101 taagcct 107  Q
    |||||||    
T  17465032 taagcct 17465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 22425253 - 22425354
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||| || ||  ||| | |||||| | ||| ||||||| ||||||||||||    
T  22425253 aatgcaacaaaaatgataattgaagtaccgttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaat 22425352  T
Q  101 ta 102  Q
    ||    
T  22425353 ta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 32697140 - 32697244
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||  ||  |||||| | ||||||  |||| ||||||| ||||| | ||||    
T  32697140 aatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggaccaaaaatataat 32697239  T
Q  101 taagc 105  Q
    |||||    
T  32697240 taagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 26275009 - 26275115
Alignment:
Q  4 gcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaa 103  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||| |||| || |||| | |||||||||||| || |||  ||||| | |||||||    
T  26275009 gcaacaaaaatgataattgagggaccgttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaa 26275108  T
Q  104 gcctaaa 110  Q
     ||||||    
T  26275109 acctaaa 26275115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 37222041 - 37222118
Alignment:
Q  31 ttttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagccta 108  Q
    ||||||| |||||||||| ||||||| ||||||  | |||||| ||||| ||||||| ||||||||||||||||||||    
T  37222041 ttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 37222118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 32695806 - 32695706
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    |||||||||||| ||||| | ||||| |||||||| |||||||||| | ||  ||||||||| | |||||| ||||||| ||||| ||||| ||||||||    
T  32695806 tgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaaatatgaggaccaaaaatgtaatta 32695707  T
Q  103 a 103  Q
    |    
T  32695706 a 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18010185 - 18010236
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggc 52  Q
    ||||||||||||||||||||||||  || |||||||| ||||||||||||||    
T  18010185 aatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggc 18010236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 24300659 - 24300606
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcagga 56  Q
    ||||||||||||||||||||||| ||| |||| || |||||||||||| |||||    
T  24300659 tgcaacaaaaatgataattgaagaaccgttttattctgttttaaaaggacagga 24300606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 40489538 - 40489473
Alignment:
Q  45 aaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaa 110  Q
    |||| ||||||||||||||  | ||| ||| ||||||||||||||||||||| |||||| ||||||    
T  40489538 aaaaaggcaggatcaattttgtgagttggttaaaatacgaggatcaaaagtgcaattaaacctaaa 40489473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 49720424 - 49720369
Alignment:
Q  53 aggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagccta 108  Q
    |||| ||||||| | ||| ||||||||| | |||||||||||||||||||||||||    
T  49720424 aggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagccta 49720369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41047139 - 41047216
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaa 79  Q
    ||||||||||||||||||||||||||| | |||| || |||||||||||| ||| | || |||| | |||||| |||||    
T  41047139 aatgcaacaaaaatgataattgaagga-cgttttattctgttttaaaaggacagaaccagtttcgtgagtaggccaaaa 41047216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 49407830 - 49407792
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaaa 110  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  49407830 ggtcaaaatgcgaggaccaaaagtgtaattaagcctaaa 49407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 110
Target Start/End: Original strand, 50901039 - 50901077
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaaa 110  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  50901039 ggtcaaaatgcgaggaccaaaagtgtaattaagcctaaa 50901077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 46013470 - 46013421
Alignment:
Q  58 caatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcct 107  Q
    ||||||| | ||| ||||||||| | ||||||||||||||||||||||||    
T  46013470 caatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcct 46013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 52375843 - 52375880
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaa 109  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  52375843 ggtcaaaatgcgaggaccaaaagtgtaattaagcctaa 52375880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 25611529 - 25611497
Alignment:
Q  75 caaaatacgaggatcaaaagtgtaattaagcct 107  Q
    ||||| |||||||||||||||||||||||||||    
T  25611529 caaaacacgaggatcaaaagtgtaattaagcct 25611497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 40838686 - 40838650
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagccta 108  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  40838686 ggtcaaaatgcgaggatcaaaagtgtaattaaaccta 40838650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 55390113 - 55390149
Alignment:
Q  76 aaaatacgaggatcaaaagtgtaattaagcctaaaaa 112  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  55390113 aaaatgcgaggaccaaaagtgtaattaagcctaaaaa 55390149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32004719 - 32004612
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||| ||||||| ||||||||||||    
T  32004719 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 32004620  T
Q  101 taagccta 108  Q
    ||||||||    
T  32004619 taagccta 32004612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 37786872 - 37786766
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  37786872 aatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaat 37786773  T
Q  101 taagcct 107  Q
    |||||||    
T  37786772 taagcct 37786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38859081 - 38859191
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||||| | |||||| ||||| ||||||| ||||||||||||    
T  38859081 aatgcaacaaaaatgataatggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 38859180  T
Q  101 taagcctaaaa 111  Q
    |||||||||||    
T  38859181 taagcctaaaa 38859191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35289008 - 35288903
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||| | |||||| |||||||||| || ||||||||||||    
T  35289008 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaat 35288909  T
Q  101 taagcc 106  Q
    ||||||    
T  35288908 taagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35289341 - 35289448
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||||||||||||||||    
T  35289341 aatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaat 35289440  T
Q  101 taagccta 108  Q
    ||||||||    
T  35289441 taagccta 35289448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 19590965 - 19591075
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||| | ||||||||||||    
T  19590965 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaat 19591064  T
Q  101 taagcctaaaa 111  Q
    |||||||||||    
T  19591065 taagcctaaaa 19591075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2658944 - 2658831
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||| || |||| | |||||| ||||| |||||||  |||||||||||    
T  2658944 aatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaat 2658845  T
Q  101 taagcctaaaaatt 114  Q
    |||||||| |||||    
T  2658844 taagcctagaaatt 2658831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 19590630 - 19590525
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  19590630 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 19590531  T
Q  101 taagcc 106  Q
    ||||||    
T  19590530 taagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23952836 - 23952727
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagta-ggtcaaaatacgaggatcaaaagtgtaa 99  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||||||||| || ||||||| | |||| |||||||| ||||||| |||||||||||    
T  23952836 aatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaa 23952737  T
Q  100 ttaagcctaa 109  Q
    ||||||||||    
T  23952736 ttaagcctaa 23952727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38161056 - 38160947
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| | |||| | |||||| |||||  |||||| ||||||||||||    
T  38161056 aatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggaccaaaagtgtaat 38160957  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  38160956 taagcctaaa 38160947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19830525 - 19830418
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  19830525 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 19830426  T
Q  101 taagccta 108  Q
    ||| ||||    
T  19830425 taaaccta 19830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 28583544 - 28583437
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| ||||||||||||||||||||  |||| ||||||||||||||||||| | |||| |||| |||||| ||||| ||||||| ||||||||||||    
T  28583544 aatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatgagtaggccaaaacacgaggaccaaaagtgtaat 28583445  T
Q  101 taagccta 108  Q
    ||||||||    
T  28583444 taagccta 28583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34534231 - 34534338
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||| | |||||| ||||| ||||| | ||||||| ||||    
T  34534231 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataat 34534330  T
Q  101 taagccta 108  Q
    ||||||||    
T  34534331 taagccta 34534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 19830859 - 19830965
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| || |||  | |||||| ||||| ||||||| ||||||||||||    
T  19830859 aatgcaacaaaaatgataattgaagtaccgttttgttatgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaat 19830958  T
Q  101 taagcct 107  Q
    |||||||    
T  19830959 taagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 29099955 - 29099863
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaa 93  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||| | |||||| ||||| ||||||| |||||    
T  29099955 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4478140 - 4478247
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||||||| || || || |||||||||||||||||| || |||| | |||||| ||||| |||||||||||||||||| |    
T  4478140 aatgcaacaaaaatgataattgaaggacaatgttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtact 4478239  T
Q  101 taagccta 108  Q
    ||| ||||    
T  4478240 taaaccta 4478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34533896 - 34533789
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| ||||||||| || ||||||||||| ||| || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  34533896 aatgcaacaaaaatgataattgaatgaccattttattctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 34533797  T
Q  101 taagccta 108  Q
    ||||||||    
T  34533796 taagccta 34533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29100291 - 29100393
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||  | |||||  ||||| ||||||| ||||||||||||    
T  29100291 aatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaat 29100390  T
Q  101 taa 103  Q
    |||    
T  29100391 taa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 37787207 - 37787317
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||| ||| ||||||| || |||||||| |||||| || |||| | |||||| ||||| ||||||| ||||||| ||||    
T  37787207 aatgcaacaaaaatgataattgaagaaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataat 37787306  T
Q  101 taagcctaaaa 111  Q
    |||||||||||    
T  37787307 taagcctaaaa 37787317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2659280 - 2659388
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||| || || |||||| | |||| |||||  |||||| ||||| ||||||    
T  2659280 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaat 2659379  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  2659380 taagcctaa 2659388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4641545 - 4641443
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||||| |||||| || |||| | |||| | ||||| ||||||| ||||||||||||    
T  4641545 aatgcaacaaaaatgataattgaatgaccgttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaat 4641446  T
Q  101 taa 103  Q
    |||    
T  4641445 taa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 38858748 - 38858642
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||| || |||| | |||| | ||||| ||||||| ||||||||| ||    
T  38858748 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttat 38858649  T
Q  101 taagcct 107  Q
    |||||||    
T  38858648 taagcct 38858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 23953169 - 23953268
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| ||||||| ||| || |||| | ||||| |||||| ||||||| ||||| ||||||    
T  23953169 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 32005054 - 32005159
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||| ||||||| ||||||| | ||||||||||||| || || |||| | |||| | ||||| | ||||| ||||||||||||    
T  32005054 aatgcaacaaaaatgataattaaaggaccgttttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaat 32005153  T
Q  101 taagcc 106  Q
    ||||||    
T  32005154 taagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 28584366 - 28584466
Alignment:
Q  5 caacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaag 104  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| || || ||||||| | | |||| ||||  |||||||  |||||||||||||||    
T  28584366 caacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaagcacgaggacgaaaagtgtaattaag 28584465  T
Q  105 c 105  Q
    |    
T  28584466 c 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 4641885 - 4641983
Alignment:
Q  2 atgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatt 101  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| || |    | |||||| ||||| ||||||| |||||||||||||    
T  4641885 atgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaatt 4641981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 107
Target Start/End: Original strand, 39137045 - 39137080
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcct 107  Q
    ||||||||||||||||||||||||||||||||||||    
T  39137045 ggtcaaaatacgaggatcaaaagtgtaattaagcct 39137080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 111
Target Start/End: Complemental strand, 39136720 - 39136681
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaaaa 111  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  39136720 ggtcaaaatgcaaggatcaaaagtgtaattaagcctaaaa 39136681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 107
Target Start/End: Complemental strand, 49064068 - 49064033
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcct 107  Q
    |||||||||||||||| |||||||||||||||||||    
T  49064068 ggtcaaaatacgaggaccaaaagtgtaattaagcct 49064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 5333914 - 5333878
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagccta 108  Q
    ||||||||| | |||||||||||||||||||||||||    
T  5333914 ggtcaaaatgcaaggatcaaaagtgtaattaagccta 5333878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 9181907 - 9181959
Alignment:
Q  55 gatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcct 107  Q
    |||||||||| | | | ||||||||| | ||||||||||||||||||||||||    
T  9181907 gatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaagcct 9181959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 25637250 - 25637194
Alignment:
Q  53 aggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaa 109  Q
    |||| ||||||||| ||| |||||| || | |||| |||||||||||||||||||||    
T  25637250 aggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaagcctaa 25637194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 34540988 - 34541099
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  34540988 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 34541087  T
Q  101 taagcctaaaaa 112  Q
    ||||||||||||    
T  34541088 taagcctaaaaa 34541099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41681239 - 41681127
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  41681239 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 41681140  T
Q  101 taagcctaaaaat 113  Q
    |||||||| ||||    
T  41681139 taagcctataaat 41681127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9930097 - 9930203
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||||||||||| | |||||||||||||||| || |||| | |||||| ||||||||||||| ||||||||||||    
T  9930097 aatgcaacaaaaatgatagttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaat 9930196  T
Q  101 taagcct 107  Q
    |||||||    
T  9930197 taagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19176730 - 19176839
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || || | | |||||| ||||| ||||||| ||||||||||||    
T  19176730 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaat 19176829  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  19176830 taagcctaaa 19176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44831352 - 44831239
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||||| | |||||| ||||| | ||||| ||||||||||||    
T  44831352 aatgcaacaaaaatgataatggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaat 44831253  T
Q  101 taagcctaaaaatt 114  Q
    ||||||| ||||||    
T  44831252 taagccttaaaatt 44831239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 19176395 - 19176287
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||  | |||| | |||||| ||||| ||||||| ||||||||||||    
T  19176395 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 19176296  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  19176295 taagcctaa 19176287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 31133660 - 31133764
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| |||| | |||||| ||||| ||||||| ||||||||||||    
T  31133660 aatgcaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 31133759  T
Q  101 taagc 105  Q
    |||||    
T  31133760 taagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9929014 - 9928912
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | ||||| |||||| ||||||| ||||||||||||    
T  9929014 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaat 9928915  T
Q  101 taa 103  Q
    |||    
T  9928914 taa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11656897 - 11657003
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  11656897 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 11656996  T
Q  101 taagcct 107  Q
    |||||||    
T  11656997 taagcct 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 13225079 - 13225185
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  13225079 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 13225178  T
Q  101 taagcct 107  Q
    |||||||    
T  13225179 taagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9178075 - 9178185
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||| |||||| ||||| |||| | |||||| ||||| ||||||| ||||||||||||    
T  9178075 aatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 9178174  T
Q  101 taagcctaaaa 111  Q
    |||||| ||||    
T  9178175 taagccaaaaa 9178185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11656560 - 11656450
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||| ||||||||||||| |||||||  |||||||||||||| || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  11656560 aatgcaacaaaaatggtaattgaaggaccgttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 11656461  T
Q  101 taagcctaaaa 111  Q
    |||||||||||    
T  11656460 taagcctaaaa 11656450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33328263 - 33328161
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||| |||| | |||||| ||||| ||||||| ||||||||||||    
T  33328263 aatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 33328164  T
Q  101 taa 103  Q
    |||    
T  33328163 taa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12571968 - 12571859
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||| || | || |||| | |||||| ||||| ||||||| ||||||||||||    
T  12571968 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 12571869  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  12571868 taagcctaaa 12571859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41681574 - 41681679
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| || |||| | | |||| ||||| ||||||| ||||||||||||    
T  41681574 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaat 41681673  T
Q  101 taagcc 106  Q
    ||||||    
T  41681674 taagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31133325 - 31133218
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||  ||||||| |||||||||||||| ||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  31133325 aatgcaacaaaaatgatacttgaaggactgttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaat 31133226  T
Q  101 taagccta 108  Q
    ||||||||    
T  31133225 taagccta 31133218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33743026 - 33742918
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||| ||||||||||||||||| |||| ||| ||| ||||||||||||||| || || |||| | |||||||||||| ||||||| ||||||||||||    
T  33743026 aatgcatcaaaaatgataattgaaagaccgttt-gttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaat 33742928  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  33742927 taagcctaaa 33742918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 11336962 - 11337069
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| |||| || |||||||||||||| ||| ||||||| | |||| | ||||| |||| || ||||||||||||    
T  11336962 aatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgtaat 11337061  T
Q  101 taagccta 108  Q
    ||||||||    
T  11337062 taagccta 11337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 44831685 - 44831793
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||  ||| ||||||| ||||||||||| |||||| || |||| | |||| | ||||| ||||||| ||||||||| ||    
T  44831685 aatgcaacaaaaatgataattgaataaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttat 44831784  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  44831785 taagcctaa 44831793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33328580 - 33328683
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||  | |||| | ||||||  |||| ||||||| ||||||| ||||    
T  33328580 aatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaat 33328679  T
Q  101 taag 104  Q
    ||||    
T  33328680 taag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12572291 - 12572393
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| ||  | |||| | |||||  ||||| ||||||| ||||||||||||    
T  12572291 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaat 12572390  T
Q  101 taa 103  Q
    |||    
T  12572391 taa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4629902 - 4629795
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| |||||||||||||||| |||| ||||||| | |||||||||||||||| || |||| | | || | ||||| ||||| || ||||||| |||    
T  4629902 aatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaat 4629803  T
Q  101 taagccta 108  Q
    ||||||||    
T  4629802 taagccta 4629795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8073992 - 8074097
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||| ||||||||||||||  |||||||| |||||||||||| || ||||| |||| | | |||| ||||| ||||||| ||||||| |||     
T  8073992 aatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggaccaaaagtataac 8074090  T
Q  101 taagcct 107  Q
    |||||||    
T  8074091 taagcct 8074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 10918231 - 10918121
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| ||||||||| |||||| | ||||||||   |||| || ||||||| | ||||| |||||| |||||||  |||| ||||||    
T  10918231 aatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtgagtagatcaaaacacgaggacaaaaaatgtaat 10918132  T
Q  101 taagcctaaaa 111  Q
    ||| |||||||    
T  10918131 taaacctaaaa 10918121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 13224741 - 13224645
Alignment:
Q  5 caacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    |||||||||||||||||||||||   ||||||| ||||||||||||||| || || |||| | |||||| ||||| |||| || ||||||||||||||    
T  13224741 caacaaaaatgataattgaaggattgttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 4630241 - 4630328
Alignment:
Q  16 ataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaa 103  Q
    |||||||||||||| || | || ||||||||||  |||||| ||||||| | |||||  ||||| |||| ||||||||||||||||||    
T  4630241 ataattgaaggaccgttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33743359 - 33743412
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcag 54  Q
    ||||||||||||||||||||||||  ||| ||||||| |||||||||| |||||    
T  33743359 aatgcaacaaaaatgataattgaaaaaccgttttgttctgttttaaaaaggcag 33743412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 10919681 - 10919732
Alignment:
Q  56 atcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcct 107  Q
    |||||||| || |||||||||||| ||||||| ||||||| |||||||||||    
T  10919681 atcaattttatgagtaggtcaaaacacgaggaccaaaagtataattaagcct 10919732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 15256332 - 15256385
Alignment:
Q  61 tttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaaaatt 114  Q
    |||||| ||| |||||||||   |||| ||||||||||||||||||||||||||    
T  15256332 tttcatgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaaaaatt 15256385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 35427324 - 35427361
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaa 109  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  35427324 ggtcaaaatgcgaggaccaaaagtgtaattaagcctaa 35427361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 6115623 - 6115663
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaaaaa 112  Q
    ||||||||||| |||| ||||||| ||||||||||||||||    
T  6115623 ggtcaaaatacaaggaccaaaagtataattaagcctaaaaa 6115663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 15255906 - 15255850
Alignment:
Q  53 aggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaa 109  Q
    |||| ||||||| | ||| ||||||||| | |||| |||||||||||||||||||||    
T  15255906 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaa 15255850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 9e-37; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 8647878 - 8647988
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||| | |||||| ||||| ||||||| ||||||||||||    
T  8647878 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 8647977  T
Q  101 taagcctaaaa 111  Q
    |||||||||||    
T  8647978 taagcctaaaa 8647988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 18183409 - 18183520
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  18183409 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 18183508  T
Q  101 taagcctaaaaa 112  Q
    ||||||||||||    
T  18183509 taagcctaaaaa 18183520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 14215683 - 14215791
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||| |||| | |||||||||||| ||||||| ||||| ||||||    
T  14215683 aatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaat 14215782  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  14215783 taagcctaa 14215791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2864859 - 2864756
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | |||||| ||||| || |||| ||||||||||||    
T  2864859 aatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaat 2864760  T
Q  101 taag 104  Q
    ||||    
T  2864759 taag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15371975 - 15371873
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||| | |||||  ||||||||||||||||||||||||||    
T  15371975 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccaa-ttcgtgagtagaccaaaatacgaggatcaaaagtgtaat 15371877  T
Q  101 taag 104  Q
    ||||    
T  15371876 taag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 15372313 - 15372427
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  15372313 aatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 15372412  T
Q  101 taagcctaaaaattt 115  Q
    ||| |||||||||||    
T  15372413 taaacctaaaaattt 15372427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8647543 - 8647438
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  8647543 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 8647444  T
Q  101 taagcc 106  Q
    ||||||    
T  8647443 taagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2865195 - 2865302
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  2865195 aatgaaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 2865294  T
Q  101 taagccta 108  Q
    ||||||||    
T  2865295 taagccta 2865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 19359580 - 19359683
Alignment:
Q  5 caacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaag 104  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||||||    
T  19359580 caacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 19359679  T
Q  105 ccta 108  Q
    ||||    
T  19359680 ccta 19359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24362276 - 24362383
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||| |||| || |||||||||||||||||| || |||| | |||||| ||||||||||||| ||||||||||||    
T  24362276 aatgcaacaaaaatgatacttgaaggaccgttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaat 24362375  T
Q  101 taagccta 108  Q
    ||||||||    
T  24362376 taagccta 24362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 29455182 - 29455288
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||| | |||||  ||||| ||||||| |||| |||||||    
T  29455182 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaat 29455281  T
Q  101 taagcct 107  Q
    |||||||    
T  29455282 taagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 5819369 - 5819474
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  5819369 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 5819468  T
Q  101 taagcc 106  Q
    ||||||    
T  5819469 taagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5819034 - 5818927
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  5819034 aatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 5818935  T
Q  101 taagccta 108  Q
    ||| ||||    
T  5818934 taaaccta 5818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8461035 - 8460928
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| || |||| | |||||| |||||||||| || |||||||| |||    
T  8461035 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaat 8460936  T
Q  101 taagccta 108  Q
    ||||||||    
T  8460935 taagccta 8460928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8461371 - 8461477
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||||| |||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  8461371 aatgcagcaaaaatgataattgaaggaccgttttgttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 8461470  T
Q  101 taagcct 107  Q
    |||||||    
T  8461471 taagcct 8461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 19359241 - 19359136
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||||||| || |||| | |||||| ||||| | ||||| ||||||||||||    
T  19359241 aatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaat 19359142  T
Q  101 taagcc 106  Q
    ||||||    
T  19359141 taagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 15709075 - 15708967
Alignment:
Q  2 atgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatt 101  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||  | || |||| | |||||| ||||| || |||| |||||||||||||    
T  15709075 atgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaatt 15708976  T
Q  102 aagcctaaa 110  Q
    |||||||||    
T  15708975 aagcctaaa 15708967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 24331666 - 24331555
Alignment:
Q  1 aatgcaacaaaaat--gataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgta 98  Q
    |||||||||||||   ||||||||||||||| ||||||| |||||||||||||||||| || |||| | ||||| |||||| ||||||| ||||||||||    
T  24331666 aatgcaacaaaaaatagataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgta 24331567  T
Q  99 attaagcctaaa 110  Q
    ||||||||||||    
T  24331566 attaagcctaaa 24331555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 18183075 - 18182968
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| |||| || ||||||||||||    
T  18183075 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaat 18182976  T
Q  101 taagccta 108  Q
    ||| ||||    
T  18182975 taaaccta 18182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 164295 - 164191
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||| ||||||||||| |||| ||||||| |||| ||||||||||||| || |||| | |||||||||||| ||||||| ||||||||||||    
T  164295 aatgcaacaaaa-tgataattgaatgaccgttttgttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaat 164197  T
Q  101 taagcc 106  Q
    ||||||    
T  164196 taagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 164631 - 164742
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||  | ||| || ||||| | ||||||||||| | ||||    
T  164631 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataat 164730  T
Q  101 taagcctaaaaa 112  Q
    ||||||||||||    
T  164731 taagcctaaaaa 164742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 25000529 - 25000635
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||  || || ||||||| | |||||| ||||| | || || ||||||||||||    
T  25000529 aatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaat 25000628  T
Q  101 taagcct 107  Q
    |||||||    
T  25000629 taagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 4623245 - 4623148
Alignment:
Q  9 aaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcc 106  Q
    |||||||||||||||||||| |||||||| |||||||||  ||||||| ||||||| | |||| ||||||| |||| || ||||||||||||||||||    
T  4623245 aaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgaccaaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 7349459 - 7349562
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||| |||||||   ||||||| ||||||||||| |||||| ||||||| | |||||  ||||| ||||||| ||||||||||||||    
T  7349459 tgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaacacgaggaccaaaagtgtaatta 7349558  T
Q  103 agcc 106  Q
    ||||    
T  7349559 agcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16018693 - 16018588
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| |||||| |||||||||||||| ||||||| | ||||||||||||| |||||||||| | | |||| ||||| |||| || ||||||||||||    
T  16018693 aatgcaataaaaat-ataattgaaggaccgttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaat 16018595  T
Q  101 taagcct 107  Q
    |||||||    
T  16018594 taagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29454845 - 29454739
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||| |||||||||||||| ||||||| ||||||| ||||||||||||||| || ||||||| | |||||| ||||| || | || |||||||| |||    
T  29454845 aatgcagcaaaaatgataattcaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaat 29454746  T
Q  101 taagcct 107  Q
    |||||||    
T  29454745 taagcct 29454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14215346 - 14215243
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||||| |  | || |||| | |||| | ||||| ||||||| ||||||||||||    
T  14215346 aatgcaacaaaaatgataactgaaggacctttttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaat 14215247  T
Q  101 taag 104  Q
    ||||    
T  14215246 taag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 16019031 - 16019134
Alignment:
Q  5 caacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaag 104  Q
    ||||||||||||||||||||| |||||||| || | ||||||||| |||||| ||||||| | |||| | ||||| | ||||| |||||||||||||||     
T  16019031 caacaaaaatgataattgaagaaccattttattctattttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaaa 16019130  T
Q  105 ccta 108  Q
    ||||    
T  16019131 ccta 16019134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 24361942 - 24361843
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||| |||| |  ||||| ||||| | | ||| ||||||||||||    
T  24361942 aatgcaacaaaaatgatacttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4222162 - 4222266
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| ||||||||||| |||| ||| |||||||| ||||||||||||||| || || |||| | || ||  ||||| ||||||| ||||||||||||    
T  4222162 aatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggaccaaaagtgtaat 4222261  T
Q  101 taagc 105  Q
    |||||    
T  4222262 taagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14463960 - 14464067
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| ||||||||||||||||||| | ||||||| | |||||||||| ||  || | |||| | |||||| ||||| |||||||  |||||||||||    
T  14463960 aatgcaataaaaatgataattgaaggatcgttttgttctattttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaat 14464059  T
Q  101 taagccta 108  Q
    ||||||||    
T  14464060 taagccta 14464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 24325317 - 24325218
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||| ||||||| ||||| |||| |  ||||| ||||| | | ||| ||||||||||||    
T  24325317 aatgcgacaaaaatgatacttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4219768 - 4219663
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||| | |||||| | |||||| |||||||||| |||| || || |||  | | |||  ||||| ||||||||||||||||||||    
T  4219768 aatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgaggatcaaaagtgtaat 4219669  T
Q  101 taagcc 106  Q
    ||||||    
T  4219668 taagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15709409 - 15709518
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||| ||||||||| | ||||||| ||||||| ||||||||| ||||| ||  | |||||| |||||| ||||| || | || ||||||||||||    
T  15709409 aatgcaacagaaatgataactaaaggaccgttttgttctgttttaaa-gggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaat 15709507  T
Q  101 taagcctaaaa 111  Q
    |||||| ||||    
T  15709508 taagccaaaaa 15709518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 7348662 - 7348559
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    |||||||||||||||||  ||||||   ||||||| ||||||||||||||| || ||||||| | |||||   |||| | ||||| ||||| ||||||||    
T  7348662 tgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaacatgaggaccaaaaatgtaatta 7348563  T
Q  103 agcc 106  Q
    ||||    
T  7348562 agcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 21371161 - 21371247
Alignment:
Q  25 ggaccattttgttatgttttaaaag-ggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaaa 111  Q
    |||| |||||||| || |||||||| || |||| |||||| || ||| ||||||||| | ||||||||||||||||||||||||||||    
T  21371161 ggacgattttgtt-tgatttaaaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaagcctaaaa 21371247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25000195 - 25000112
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacga 84  Q
    ||||||| ||||||||||||| |||||||||||| || |||||||| |||||| || ||| ||| | |||||| ||||| ||||    
T  25000195 aatgcaataaaaatgataattaaaggaccattttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 6018416 - 6018315
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||||||||| |  |||||||| |||||||||||| || || || |||| | |||||  ||||| ||||| | ||||| ||||||||    
T  6018416 tgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaaccaaaaatgtaatta 6018318  T
Q  103 agc 105  Q
    |||    
T  6018317 agc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6019211 - 6019274
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttc 64  Q
    ||||||||||||||||||||| || |||  ||||||| ||||||||||| ||| ||||| ||||    
T  6019211 aatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttc 6019274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 4624665 - 4624751
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgagga 87  Q
    ||||||||| |||||||||||||| ||   |||||||||||||||||  | || || ||||||| | ||||||| |||| |||||||    
T  4624665 aatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgtgagtaggttaaaacacgagga 4624751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24332001 - 24332107
Alignment:
Q  1 aatgcaacaaaa-atgataattgaaggaccattttgttatgtttt-aaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatc-aaaagtgt 97  Q
    |||||||||||| |||||||||| |||||| ||||||| |||||| |||| |||||||||| |||| | |||| | ||||| | || || | ||||||||    
T  24332001 aatgcaacaaaaaatgataattgcaggaccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgt 24332100  T
Q  98 aattaag 104  Q
    |||||||    
T  24332101 aattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 109
Target Start/End: Original strand, 15115604 - 15115641
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaa 109  Q
    |||||||||  |||||||||||||||||||||||||||    
T  15115604 ggtcaaaatgtgaggatcaaaagtgtaattaagcctaa 15115641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 28289731 - 28289683
Alignment:
Q  59 aatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcct 107  Q
    |||||| | ||| ||||||||| | ||||||||||||||||||||||||    
T  28289731 aatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcct 28289683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39154460 - 39154566
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  39154460 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 39154559  T
Q  101 taagcct 107  Q
    |||||||    
T  39154560 taagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29870059 - 29870171
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| || |||||| |||||| ||||| ||||||| ||||||||||||    
T  29870059 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaat 29870158  T
Q  101 taagcctaaaaat 113  Q
    |||||| ||||||    
T  29870159 taagccaaaaaat 29870171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15646635 - 15646741
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||| | |||||| ||||| ||||||| ||||||||||||    
T  15646635 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 15646734  T
Q  101 taagcct 107  Q
    |||||||    
T  15646735 taagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18984559 - 18984665
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| | |||||| ||||| || |||| ||||||||||||    
T  18984559 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaat 18984658  T
Q  101 taagcct 107  Q
    |||||||    
T  18984659 taagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 50970718 - 50970824
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  50970718 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaat 50970817  T
Q  101 taagcct 107  Q
    |||||||    
T  50970818 taagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21856147 - 21856038
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | ||||| |||||| ||||||| ||||||||||||    
T  21856147 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaat 21856048  T
Q  101 taagcctaaa 110  Q
    |||| |||||    
T  21856047 taagtctaaa 21856038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 29307382 - 29307487
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||||||||| ||||||| |||||||| |||    
T  29307382 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaat 29307481  T
Q  101 taagcc 106  Q
    ||||||    
T  29307482 taagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4636411 - 4636515
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| |||| | |||||| ||||| ||||||| ||||||||||||    
T  4636411 aatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 4636510  T
Q  101 taagc 105  Q
    |||||    
T  4636511 taagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 5539917 - 5539817
Alignment:
Q  5 caacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaag 104  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| | |||||| ||||| ||||||| ||||||||||||||||    
T  5539917 caacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 5539818  T
Q  105 c 105  Q
    |    
T  5539817 c 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8678646 - 8678542
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  8678646 aatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 8678547  T
Q  101 taagc 105  Q
    |||||    
T  8678546 taagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 18984224 - 18984117
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||  ||||| ||||||| ||||||||||||    
T  18984224 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaat 18984125  T
Q  101 taagccta 108  Q
    ||||||||    
T  18984124 taagccta 18984117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26859499 - 26859606
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| | |||| | |||||  ||||| ||||||||||||||||||||    
T  26859499 aatgcaacaaaaatgataattgaaggaccgtattgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaat 26859598  T
Q  101 taagccta 108  Q
    ||||||||    
T  26859599 taagccta 26859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21856483 - 21856588
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||| ||||||||||| |||||||||| ||||||| |||||||||| |||||||||| |||||| |||||| ||||| ||||||| ||||||||||||    
T  21856483 aatgcagcaaaaatgatacttgaaggaccgttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaat 21856582  T
Q  101 taagcc 106  Q
    ||||||    
T  21856583 taagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 29307058 - 29306953
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| || || || |||| | |||||| ||||| ||||||||||||||||||||    
T  29307058 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaat 29306959  T
Q  101 taagcc 106  Q
    ||||||    
T  29306958 taagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15173534 - 15173640
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || |||  | |||||| ||||| ||||||| ||||||||||||    
T  15173534 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaat 15173632  T
Q  101 taagccta 108  Q
    ||||||||    
T  15173633 taagccta 15173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15646297 - 15646190
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || || |||| | |||||| ||||| ||||||| ||||||| ||||    
T  15646297 aatgcaacaaaaatgataattgaagtaccattttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataat 15646198  T
Q  101 taagccta 108  Q
    ||||||||    
T  15646197 taagccta 15646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33144359 - 33144462
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  33144359 aatgcaacaaaaatgatatttgaaggtccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 33144458  T
Q  101 taag 104  Q
    ||||    
T  33144459 taag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 50970383 - 50970276
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||| |||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  50970383 aatgcaacaaaaatgataattgaaggaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 50970284  T
Q  101 taagccta 108  Q
    ||||||||    
T  50970283 taagccta 50970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5540258 - 5540364
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||| ||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  5540258 aatgcaacaaaaatgataattgaaggaccgttttcttctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 5540357  T
Q  101 taagcct 107  Q
    |||||||    
T  5540358 taagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 26859164 - 26859054
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| || |||| | |||||| ||||| || |||| ||||||||||||    
T  26859164 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggaccaaaagtgtaat 26859065  T
Q  101 taagcctaaaa 111  Q
    |||||| ||||    
T  26859064 taagccaaaaa 26859054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 8678981 - 8679086
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| || || | | |||||| ||||| ||||||| ||||||||||||    
T  8678981 aatgcaacaaaaatgataattgaatgacctttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaat 8679080  T
Q  101 taagcc 106  Q
    ||||||    
T  8679081 taagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9019078 - 9018969
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| ||||| |||| ||||||| |||||||||||||||| | || |||| | |||||| ||||| ||||||| ||||||||||||    
T  9019078 aatgcaacaaaaatgatagttgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaat 9018979  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  9018978 taagcctaaa 9018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9019403 - 9019512
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||| ||||| | || |||  | |||||||||||| ||||||| ||||||||||||    
T  9019403 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaat 9019502  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  9019503 taagcctaaa 9019512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17433321 - 17433216
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||||||| | ||| |||||| |||||| ||||| | ||||| ||||||||||||    
T  17433321 aatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaat 17433222  T
Q  101 taagcc 106  Q
    ||||||    
T  17433221 taagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 52268393 - 52268289
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||| |||| |||  ||||||| |||||||||||||||||| ||||||| | || ||| ||||||||||||| ||||||||||||||    
T  52268393 tgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaatta 52268294  T
Q  103 agcct 107  Q
    |||||    
T  52268293 agcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 17433655 - 17433758
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| || || ||||||| ||||||||||||    
T  17433655 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaat 17433754  T
Q  101 taag 104  Q
    ||||    
T  17433755 taag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29869725 - 29869619
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||||||||| || || |||| | |||| | ||||| ||||||| ||||||||||||    
T  29869725 aatgcaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaat 29869626  T
Q  101 taagcct 107  Q
    |||||||    
T  29869625 taagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 33144021 - 33143925
Alignment:
Q  2 atgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgta 98  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||    
T  33144021 atgcaaaaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5963018 - 5963120
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||  ||||||| | ||||||||||||| ||||| |||| | |||||| ||||| ||||||| ||||||||||||    
T  5963018 aatgcaacaaaaatgataattgaaagactgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 5963117  T
Q  101 taa 103  Q
    |||    
T  5963118 taa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 52269190 - 52269291
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||| |||| |||  ||||||| |||||||||||||||| | | ||||||| |||| ||||||| ||||||| ||||||||||||||    
T  52269190 tgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggaccaaaagtgtaatta 52269289  T
Q  103 ag 104  Q
    ||    
T  52269290 ag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 39154124 - 39154021
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||||||||| ||||| |||| | |||| | ||||| | || || ||||||||||||    
T  39154124 aatgcaacaaaaatgataattgcaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaat 39154025  T
Q  101 taag 104  Q
    ||||    
T  39154024 taag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 15173201 - 15173099
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||| ||| |||||||   ||||||||||||||||  | |||| | |||||| ||||| ||||||| ||||||||||||    
T  15173201 aatgcaacaaaaatgataattgaagaaccgttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 15173102  T
Q  101 taa 103  Q
    |||    
T  15173101 taa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 2733416 - 2733507
Alignment:
Q  20 ttgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaaa 111  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||   | |||| ||||| || |||| ||||||| |||||||||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagcctaaaa 2733507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17112386 - 17112282
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| |||||||||||||||||||| ||||| || | ||||||||||||   | ||||||||| ||||| |||||| | ||| | ||||||||||||    
T  17112386 aatgcaataaaaatgataattgaaggactattttattctattttaaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaat 17112288  T
Q  101 taagcc 106  Q
    ||||||    
T  17112287 taagcc 17112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5962683 - 5962579
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| ||||| |||| ||||||| |||||||||||||| ||| || |||| | | |||  || || ||||||| ||||| ||||||    
T  5962683 aatgcaacaaaaatgatagttgaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaat 5962584  T
Q  101 taagc 105  Q
    |||||    
T  5962583 taagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 47827033 - 47827125
Alignment:
Q  6 aacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgta 98  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| || || |||| | |||||| ||||| | |  |||||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 52235153 - 52235216
Alignment:
Q  45 aaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagccta 108  Q
    ||||||||||||||| |||| | ||| ||| |||||  ||||||||||||||||||||||||||    
T  52235153 aaaagggcaggatcagtttcgtgagttggttaaaatctgaggatcaaaagtgtaattaagccta 52235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  31 ttttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaag 104  Q
    ||||||||| ||||||||||||| || || |||| | |||||  ||||| ||||||| ||||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 44954721 - 44954771
Alignment:
Q  55 gatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagc 105  Q
    ||||| |||||| ||| ||||||||| |||||| |||||||||||||||||    
T  44954721 gatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 44954771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 8229669 - 8229632
Alignment:
Q  74 tcaaaatacgaggatcaaaagtgtaattaagcctaaaa 111  Q
    |||||||  |||||||||||||||||||||||||||||    
T  8229669 tcaaaatgtgaggatcaaaagtgtaattaagcctaaaa 8229632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 44802683 - 44802723
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaaaaa 112  Q
    ||||||||| | |||| ||||||||||||||||||||||||    
T  44802683 ggtcaaaatgcaaggaccaaaagtgtaattaagcctaaaaa 44802723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11063 - 11168
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  11063 aatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaat 11162  T
Q  101 taagcc 106  Q
    ||||||    
T  11163 taagcc 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10726 - 10640
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgagga 87  Q
    |||||||| ||||||||| |||||||||| ||||||| |||||||||||||||||| || |||||| |||||| ||||| |||||||    
T  10726 aatgcaacgaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 9e-34; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22219793 - 22219902
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  22219793 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 22219892  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  22219893 taagcctaaa 22219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12935262 - 12935154
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  12935262 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 12935163  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  12935162 taagcctaa 12935154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 10900370 - 10900481
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||||||||||| ||||||||||||    
T  10900370 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaat 10900469  T
Q  101 taagcctaaaaa 112  Q
    |||||| |||||    
T  10900470 taagccaaaaaa 10900481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20741205 - 20741098
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  20741205 aatgcaacaaaaatgatatttgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 20741106  T
Q  101 taagccta 108  Q
    ||||||||    
T  20741105 taagccta 20741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11445427 - 11445536
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  11445427 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 11445526  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  11445527 taagcctaaa 11445536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 18257242 - 18257135
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||| | ||||| ||||||| ||||||||||||    
T  18257242 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaat 18257143  T
Q  101 taagccta 108  Q
    ||||||||    
T  18257142 taagccta 18257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 23075568 - 23075675
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  23075568 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 23075667  T
Q  101 taagccta 108  Q
    ||||||||    
T  23075668 taagccta 23075675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11445092 - 11444982
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| |||||||| ||  ||| | |||||| ||||| ||||||| ||||||||||||    
T  11445092 aatgcaacaaaaatgataattgaaggaccattttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 11444993  T
Q  101 taagcctaaaa 111  Q
    |||||||||||    
T  11444992 taagcctaaaa 11444982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 1149553 - 1149456
Alignment:
Q  18 aattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaaaattt 115  Q
    |||||||||||||||||||| |||||||||||||||||| || |||| | |||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctataaattt 1149456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 4811696 - 4811801
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||  ||| ||||| |||||| |||||| ||||| ||||||||||||||| ||||    
T  4811696 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagtataat 4811795  T
Q  101 taagcc 106  Q
    ||||||    
T  4811796 taagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28472742 - 28472633
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| || |||| | ||| || ||||| ||||||| ||||||||||||    
T  28472742 aatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaat 28472643  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  28472642 taagcctaaa 28472633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29859931 - 29859822
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| || |||| | ||| || ||||| ||||||| ||||||||||||    
T  29859931 aatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaat 29859832  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  29859831 taagcctaaa 29859822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2319777 - 2319669
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| ||||||| ||||| ||||||    
T  2319777 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 2319678  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  2319677 taagcctaa 2319669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18505359 - 18505463
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||| | |||||  ||||| ||||||| ||||||| ||||    
T  18505359 aatgcaacaaaaatgataattgaaggactgttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataat 18505458  T
Q  101 taagc 105  Q
    |||||    
T  18505459 taagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10900044 - 10899942
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| |||| || ||||||||||||    
T  10900044 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaat 10899945  T
Q  101 taa 103  Q
    |||    
T  10899944 taa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15828081 - 15828187
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| | || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  15828081 aatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 15828180  T
Q  101 taagcct 107  Q
    |||||||    
T  15828181 taagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 20741552 - 20741650
Alignment:
Q  9 aaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcct 107  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||| | |||||| ||||| ||||||| ||| |||||||||||||||    
T  20741552 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcct 20741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11277022 - 11277127
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||| || |||| | |||| | ||||| ||||||| ||||||||||||    
T  11277022 aatgcaacaaaaatgataattgaagaaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaat 11277121  T
Q  101 taagcc 106  Q
    ||||||    
T  11277122 taagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18257577 - 18257682
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||| ||||||||| |||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||||||||| ||||||| ||||||| ||||    
T  18257577 aatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataat 18257676  T
Q  101 taagcc 106  Q
    ||||||    
T  18257677 taagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 29033537 - 29033436
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||| ||||||||  ||||||| |||||||||||||||||| ||||||| | || ||| ||||||||||||| ||||||||||||||    
T  29033537 tgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaatta 29033438  T
Q  103 ag 104  Q
    ||    
T  29033437 ag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 23074096 - 23073998
Alignment:
Q  9 aaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcct 107  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||| || |||| | |||||| ||||| ||||||| |||||||||||||||||||    
T  23074096 aaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1149872 - 1149977
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||| ||||||||||||| ||||||| | ||||||||||||| || || |||||| ||||||  |||| ||||||| ||||||||||||    
T  1149872 aatgcaacaaaaatggtaattgaaggaccgttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaat 1149971  T
Q  101 taagcc 106  Q
    ||||||    
T  1149972 taagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31470756 - 31470865
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | || |||| | ||||||  |||| || |||| ||||||||||||    
T  31470756 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaat 31470855  T
Q  101 taagcctaaa 110  Q
    ||||| ||||    
T  31470856 taagcataaa 31470865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12935597 - 12935704
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||| || ||||||| || |||| | |||| | ||||| ||||||| ||||||||||||    
T  12935597 aatgtaacaaaaatgataattgaaggaccgttttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaat 12935696  T
Q  101 taagccta 108  Q
    ||||||||    
T  12935697 taagccta 12935704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11276695 - 11276589
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||  ||||| ||| |||  ||| |||||||    
T  11276695 aatgaaacaaaaatgacaattgaaggaccattttgttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaat 11276596  T
Q  101 taagcct 107  Q
    |||||||    
T  11276595 taagcct 11276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18505024 - 18504922
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||| |||||||||||||||||||| ||| ||||||| |||||||||| ||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  18505024 aatgaaacaaaaatgataattgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 18504925  T
Q  101 taa 103  Q
    |||    
T  18504924 taa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 31470420 - 31470314
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||| ||||||||| |||  ||||||| ||||||||||| ||| || || |||| | |||||| ||||| ||||||||||||||||||||    
T  31470420 aatgcaacaaaaataataattgaatgactgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaat 31470321  T
Q  101 taagcct 107  Q
    |||||||    
T  31470320 taagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 18296250 - 18296139
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||| ||||||||  ||||||| |||||||||||||||  ||||||||  | |||| ||||||| |||||||  |||| | ||||    
T  18296250 aatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaattttgtgagtaagtcaaaacacgaggactaaaattataat 18296151  T
Q  101 taagcctaaaaa 112  Q
    ||||||||||||    
T  18296150 taagcctaaaaa 18296139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15827745 - 15827639
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccat--tttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgta 98  Q
    |||||||||||||||||| |||||||||| |  ||||||||||||||||||| ||| | || |||| | |||| | ||||| ||||||| ||||||||||    
T  15827745 aatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgta 15827646  T
Q  99 attaagc 105  Q
    |||||||    
T  15827645 attaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 29035077 - 29035180
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||| | |||||| |||||||| |||||||||||||||  | ||||||| | ||||||  |||| |||||||  |||||||||||    
T  29035077 aatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaaagtgtaat 29035176  T
Q  101 taag 104  Q
    ||||    
T  29035177 taag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2322658 - 2322760
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||| ||  | |||| | |||||  ||||| |||| || ||||||||||||    
T  2322658 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaat 2322757  T
Q  101 taa 103  Q
    |||    
T  2322758 taa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 3835166 - 3835268
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||| ||||||||||||||| |||||| |||||||| |||||||||  ||||||| || |||| | |||||||||||| ||  ||| ||||||||||||    
T  3835166 aatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaacacatggaccaaaagtgtaat 3835265  T
Q  101 taa 103  Q
    |||    
T  3835266 taa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4811477 - 4811372
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||| |||||||||||||||||||||||| |||| || | ||||||||||||| || || |||| | |||||  ||||||||  ||| ||||||||||||    
T  4811477 aatgaaacaaaaatgataattgaaggaccgttttattctattttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaat 4811378  T
Q  101 taagcc 106  Q
    ||||||    
T  4811377 taagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 31242867 - 31242802
Alignment:
Q  45 aaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaa 110  Q
    |||| |||||||||| |||| | ||| ||||||||| ||||| |||||||||||||||| ||||||    
T  31242867 aaaaaggcaggatcattttcgtgagttggtcaaaatgcgagggtcaaaagtgtaattaaacctaaa 31242802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 22534214 - 22534270
Alignment:
Q  50 ggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcc 106  Q
    ||||||| || |||| | ||| |||||||||||||||| ||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 30251204 - 30251248
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaaaaatttc 116  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||    
T  30251204 ggtcaaaatagtaggatcaaaagtgtaattaagcctaaaattttc 30251248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 5120968 - 5121020
Alignment:
Q  59 aatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaaa 111  Q
    |||||| | ||| ||||||||| | |||| |||||||||||||||||||||||    
T  5120968 aatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaaaa 5121020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 9e-34; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25447352 - 25447247
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||||| |||||| ||||| ||||||| ||||||||||||    
T  25447352 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaat 25447253  T
Q  101 taagcc 106  Q
    ||||||    
T  25447252 taagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 46193510 - 46193405
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| | |||||| ||||| ||||||| ||||||||||||    
T  46193510 aatgcaacaaaaatgataattgaaggacctttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 46193411  T
Q  101 taagcc 106  Q
    ||||||    
T  46193410 taagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23494883 - 23494991
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  23494883 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 23494982  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  23494983 taagcctaa 23494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2118398 - 2118295
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||||| ||||| || |||| ||||||||||||    
T  2118398 aatgcaacaaaaatgataattgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaat 2118299  T
Q  101 taag 104  Q
    ||||    
T  2118298 taag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33109904 - 33110011
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| | || ||| ||||| | ||||| ||||||||||||    
T  33109904 aatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaacatgaggaccaaaagtgtaat 33110003  T
Q  101 taagccta 108  Q
    ||||||||    
T  33110004 taagccta 33110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4219999 - 4220109
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| |||| | |||||| ||||| ||||||| ||||||||||||    
T  4219999 aatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 4220098  T
Q  101 taagcctaaaa 111  Q
    ||| |||||||    
T  4220099 taaacctaaaa 4220109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22170377 - 22170482
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||| ||||||| ||||||| |||||||||||||| ||||||| ||||||||||||    
T  22170377 aatgcaacaaaaatgataattgaatgaccgttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaat 22170475  T
Q  101 taagcct 107  Q
    |||||||    
T  22170476 taagcct 22170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 46193845 - 46193948
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||| | |||||| ||||| ||||||| ||||||||||||    
T  46193845 aatgcaataaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 46193944  T
Q  101 taag 104  Q
    ||||    
T  46193945 taag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 51021236 - 51021342
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||| |||||||| ||||||| ||||||| |||||||||||||||||| ||||||| | |||||| ||||| ||||||||||||||||||||    
T  51021236 aatgcaacaaaa-tgataattaaaggaccgttttgttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaat 51021334  T
Q  101 taagccta 108  Q
    ||||||||    
T  51021335 taagccta 51021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 25937775 - 25937665
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | ||||||  |||| ||||||| ||||| ||||||    
T  25937775 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaat 25937676  T
Q  101 taagcctaaaa 111  Q
    |||||||||||    
T  25937675 taagcctaaaa 25937665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 25938111 - 25938217
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||| | |||||| ||||| || |||| ||||||||||||    
T  25938111 aatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaat 25938210  T
Q  101 taagcct 107  Q
    |||||||    
T  25938211 taagcct 25938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 48526301 - 48526195
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||   || |||||| |||||||||||| ||||| | ||||||||||||    
T  48526301 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaat 48526202  T
Q  101 taagcct 107  Q
    |||||||    
T  48526201 taagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12234769 - 12234874
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||| | |||||| ||||| ||||||| ||||||| ||||    
T  12234769 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataat 12234868  T
Q  101 taagcc 106  Q
    ||||||    
T  12234869 taagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 11153587 - 11153698
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||||| ||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  11153587 aatgcaacaaaaatgataattgaaggaacgttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 11153686  T
Q  101 taagcctaaaaa 112  Q
    |||||| |||||    
T  11153687 taagccaaaaaa 11153698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15523340 - 15523233
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| |||||| |||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  15523340 aatgcaaaaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 15523241  T
Q  101 taagccta 108  Q
    ||||||||    
T  15523240 taagccta 15523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25447676 - 25447783
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| |||| || ||||||||||||    
T  25447676 aatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaat 25447775  T
Q  101 taagccta 108  Q
    ||||||||    
T  25447776 taagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15523674 - 15523780
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| || |||| | |||||  ||||| |||| || ||||||||||||    
T  15523674 aatgcaacaaaaatgatacttgaaggaccattttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaat 15523773  T
Q  101 taagcct 107  Q
    |||||||    
T  15523774 taagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 22434280 - 22434174
Alignment:
Q  5 caacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaag 104  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||| | ||||| ||||||| ||||||||||||||||    
T  22434280 caacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaag 22434181  T
Q  105 cctaaaa 111  Q
    || ||||    
T  22434180 ccaaaaa 22434174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20958299 - 20958408
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||   |||||| |||||||||||||||||| || |||| | |||||| |||||||||||||  |||||||||||    
T  20958299 aatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggactaaaagtgtaat 20958398  T
Q  101 taagcctaaa 110  Q
    ||||| ||||    
T  20958399 taagcgtaaa 20958408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 45082864 - 45082969
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||| | ||||| ||||||| ||||||||||||    
T  45082864 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaat 45082963  T
Q  101 taagcc 106  Q
    ||||||    
T  45082964 taagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20470951 - 20471059
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||| | || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  20470951 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaat 20471050  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  20471051 taagcctaa 20471059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 48293699 - 48293592
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||| || |||||||| |||||||||  | ||||||||||||| | |||| | ||||| ||||||| ||||||||||||    
T  48293699 aatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttcgtgagtaagccaaaacacgaggaccaaaagtgtaat 48293600  T
Q  101 taagccta 108  Q
    ||||||||    
T  48293599 taagccta 48293592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18751704 - 18751602
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||||||| || || ||| || |||||| ||||| ||||||| ||||||||||||    
T  18751704 aatgcaacaaaaatgatatttgaaggaccgttttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaat 18751605  T
Q  101 taa 103  Q
    |||    
T  18751604 taa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 12234434 - 12234326
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| || |||| | | || | ||||| | ||||| ||||||||||||    
T  12234434 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaat 12234335  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  12234334 taagcctaa 12234326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18763960 - 18764068
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||| || || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  18763960 aatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 18764059  T
Q  101 taagcctaa 109  Q
    |||| ||||    
T  18764060 taagtctaa 18764068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 33109789 - 33109686
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| || |||| | |||| | ||||| ||||||| ||||| ||||||    
T  33109789 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaat 33109690  T
Q  101 taag 104  Q
    ||||    
T  33109689 taag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 48708400 - 48708293
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||| |||| |   |||| ||||| ||  ||| ||||||||||||    
T  48708400 aatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaaaacacatggaccaaaagtgtaat 48708301  T
Q  101 taagccta 108  Q
    ||||||||    
T  48708300 taagccta 48708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 48713786 - 48713893
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||| ||| || || |||||| ||||||  |||| ||||| || |||||||||||    
T  48713786 aatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaattaaaagtgtaat 48713885  T
Q  101 taagccta 108  Q
    ||| ||||    
T  48713886 taaaccta 48713893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 51020902 - 51020791
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| || |||  | | |  | ||||| | ||||||||||||||||||    
T  51020902 aatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaat 51020803  T
Q  101 taagcctaaaaa 112  Q
    ||||||||||||    
T  51020802 taagcctaaaaa 51020791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 54995174 - 54995067
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||  | |||| | |||||| ||| | ||||||| ||||||||||||    
T  54995174 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaat 54995075  T
Q  101 taagccta 108  Q
    ||| ||||    
T  54995074 taaaccta 54995067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2118735 - 2118837
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||  |||| || |||||| || ||| ||||| |||| || ||||||||||||    
T  2118735 aatgcaacaaaaatgataattgaatgaccgttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaat 2118834  T
Q  101 taa 103  Q
    |||    
T  2118835 taa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11153251 - 11153145
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| |||| || | ||||||||||||| || ||||||  | |||||| ||||| ||||||| ||||||| ||||    
T  11153251 aatgcaacaaaaatgataattgaaggaccgttttattctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataat 11153152  T
Q  101 taagcct 107  Q
    |||||||    
T  11153151 taagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 10258329 - 10258433
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||||||||  || |||||  | |||||||||||||||||| ||||||| | |||||| || || ||||||| ||||||||||||||    
T  10258329 tgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaacacgaggaccaaaagtgtaatta 10258428  T
Q  103 agcct 107  Q
    |||||    
T  10258429 agcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 4219662 - 4219559
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||  ||||||| | |||||||| ||||||| || |||| | |||||| ||||| ||||||| ||||| ||||||    
T  4219662 aatgcaacaaaaatgataattgaaggactgttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 4219563  T
Q  101 taag 104  Q
    ||||    
T  4219562 taag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 23494548 - 23494445
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| |||||||||||||||||||||  |||||| ||||||||||||||||||  | |||| | |||||| ||||| ||||||| ||||| ||||||    
T  23494548 aatgcaataaaaatgataattgaaggaccgctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 23494449  T
Q  101 taag 104  Q
    ||||    
T  23494448 taag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 38962259 - 38962362
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| || |||| | | |||  ||||| ||||||| ||||| ||||||    
T  38962259 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaat 38962358  T
Q  101 taag 104  Q
    ||||    
T  38962359 taag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 54995508 - 54995614
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||| ||||| |||||||||| ||||||| | ||||||||||||| ||||| |||| | |||||| ||||| ||||||| ||||||||||||    
T  54995508 aatgcaacaaaa-tgatacttgaaggaccgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 54995606  T
Q  101 taagccta 108  Q
    ||| ||||    
T  54995607 taaaccta 54995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12503541 - 12503455
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgagga 87  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||| |||| | |||| ||||||| |||||||    
T  12503541 aatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgagga 12503455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 35363040 - 35363146
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgtttt-aaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaa 99  Q
    |||||||||||||||||||||||| |||| ||||||| | |||| ||||| |||| | || |||| | |||||| ||||| |||||||||||||||||||    
T  35363040 aatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaa 35363139  T
Q  100 ttaagcc 106  Q
    |||||||    
T  35363140 ttaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 48526621 - 48526723
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||| |||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||  ||||| ||||||| ||||||| ||||    
T  48526621 aatgcaacaaaagtgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataat 48526720  T
Q  101 taa 103  Q
    |||    
T  48526721 taa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 16691512 - 16691616
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||| |||||| |||||| ||||||||||| ||||||  ||||||| || |||| | |||||||||||| ||  ||||||||||||||||    
T  16691512 aatgcaacaaaaataataattaaaggacaattttgttatg-tttaaagaggcaggaccattttcgtgagtaggtcaaaacacagggatcaaaagtgtaat 16691610  T
Q  101 taagcc 106  Q
    ||||||    
T  16691611 taagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22434617 - 22434725
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| || ||||||| ||||||| || |||| | |||||| ||||| ||||||| ||||| ||||||    
T  22434617 aatgcaacaaaaatgataattgaatgaccgttttgttctg-tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 22434715  T
Q  101 taagcctaaa 110  Q
    ||| ||||||    
T  22434716 taaacctaaa 22434725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 48294983 - 48295088
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||  |||| || ||||||| | ||||| |||||| |||| || ||||| ||||||    
T  48294983 aatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaatttcgtgagtagatcaaaacacgatgaccaaaaatgtaat 48295082  T
Q  101 taagcc 106  Q
    ||||||    
T  48295083 taagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16691041 - 16690939
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||||||  |||||||| |||||||||  ||||||| || |||| | ||||| |||||| || |||| ||||| ||||||    
T  16691041 aatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaaaacacaaggaccaaaaatgtaat 16690942  T
Q  101 taa 103  Q
    |||    
T  16690941 taa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43243720 - 43243806
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgagga 87  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||| || || |||| | |||||| ||||| |||||||    
T  43243720 aatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgagga 43243806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 55189626 - 55189528
Alignment:
Q  8 caaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcc 106  Q
    ||||||||||||||||| ||| |||||||| | |||||||||||||  | || ||| || | |||||||||| ||||||||||||| | ||||||||||    
T  55189626 caaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatataattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 16318254 - 16318322
Alignment:
Q  39 tgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcct 107  Q
    ||||||||||||||||||||| |||  | |||||| ||||| ||||||| |||||||||||||||||||    
T  16318254 tgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44892588 - 44892692
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||  ||||||||| |||  ||||||| |||||||||| ||||| | || |||| | |||||||||||| ||||||| ||||| | ||||    
T  44892588 aatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggaccaaaaatataat 44892687  T
Q  101 taagc 105  Q
    |||||    
T  44892688 taagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45082536 - 45082484
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggca 53  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  45082536 aatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggca 45082484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20957294 - 20957246
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaag 49  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  20957294 aatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaag 20957246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 44890622 - 44890518
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||  |||||| |||||   ||||||| ||||||||||||||| || || |||| | | |||||||||| || |||| ||||| ||||||    
T  44890622 aatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaacacaaggaccaaaattgtaat 44890523  T
Q  101 taagc 105  Q
    |||||    
T  44890522 taagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43242375 - 43242328
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaa 48  Q
    ||||||| |||||||||||||||| |||| ||||||| ||||||||||    
T  43242375 aatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 55677451 - 55677510
Alignment:
Q  53 aggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaaaa 112  Q
    |||| ||||||| | ||| ||||||||||| |||| ||||||||||||||||||| ||||    
T  55677451 aggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagccttaaaa 55677510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 12593521 - 12593575
Alignment:
Q  58 caatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaaaa 112  Q
    ||||||| | ||| ||||||||| | |||| ||||||||||||||||||||||||    
T  12593521 caatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaaaaa 12593575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 229195 - 229159
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagccta 108  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  229195 ggtcaaaatacgaggaccaaaagtgtaattaaaccta 229159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12503876 - 12503912
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgtt 37  Q
    |||||||||||||||||| |||||||||| |||||||    
T  12503876 aatgcaacaaaaatgatacttgaaggaccgttttgtt 12503912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44220817 - 44220861
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgtttta 45  Q
    |||| |||||||||||||| |||||||| |||||||| |||||||    
T  44220817 aatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 45838581 - 45838541
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaaaaa 112  Q
    ||||||||||| |||| ||||||||||| ||||||||||||    
T  45838581 ggtcaaaatacaaggaccaaaagtgtaaataagcctaaaaa 45838541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 7446786 - 7446897
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||| | ||||| ||||||||||||| ||||||    
T  7446786 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaat 7446885  T
Q  101 taagcctaaaaa 112  Q
    ||||||||||||    
T  7446886 taagcctaaaaa 7446897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 18451271 - 18451382
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  18451271 aatgcaacaaaaatgatatttgaaggactattttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaat 18451370  T
Q  101 taagcctaaaaa 112  Q
    ||||||||||||    
T  18451371 taagcctaaaaa 18451382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22374765 - 22374872
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || ||||||| | |||||| ||||| ||||||| ||||||||||||    
T  22374765 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 22374864  T
Q  101 taagccta 108  Q
    ||||||||    
T  22374865 taagccta 22374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 7446447 - 7446341
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| |||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||| |||||  ||||| ||||||||||||||||||||    
T  7446447 aatgcaataaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaat 7446348  T
Q  101 taagcct 107  Q
    |||||||    
T  7446347 taagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 26538519 - 26538629
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  26538519 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 26538618  T
Q  101 taagcctaaaa 111  Q
    |||||||||||    
T  26538619 taagcctaaaa 26538629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 239795 - 239896
Alignment:
Q  4 gcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaa 103  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |||||| ||||| ||||||| ||||||||||| |||    
T  239795 gcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaa 239894  T
Q  104 gc 105  Q
    ||    
T  239895 gc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43058773 - 43058881
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| || |||| | |||||| ||||| ||||||||||||||||||||    
T  43058773 aatgcaacaaaa-tgataattgaaggaccattttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaat 43058871  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  43058872 taagcctaaa 43058881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1978549 - 1978656
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||| | |||||| ||||| || |||| ||||||||||||    
T  1978549 aatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaat 1978648  T
Q  101 taagccta 108  Q
    ||||||||    
T  1978649 taagccta 1978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22374425 - 22374318
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  22374425 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 22374326  T
Q  101 taagccta 108  Q
    ||||||||    
T  22374325 taagccta 22374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28617054 - 28617160
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | || |||| | |||||| ||||| ||||||| ||||||||||||    
T  28617054 aatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 28617153  T
Q  101 taagcct 107  Q
    |||||||    
T  28617154 taagcct 28617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40027580 - 40027682
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||| | |||||| ||||| ||||||| ||||||||||||    
T  40027580 aatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 40027679  T
Q  101 taa 103  Q
    |||    
T  40027680 taa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35779813 - 35779708
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| || |||| | |||| ||||||| ||||||| ||||||||||||    
T  35779813 aatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaacacgaggaccaaaagtgtaat 35779714  T
Q  101 taagcc 106  Q
    ||||||    
T  35779713 taagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 28616716 - 28616608
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| ||||||| ||||||||||||||    
T  28616716 tgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 28616617  T
Q  103 agcctaaaa 111  Q
    |||| ||||    
T  28616616 agccaaaaa 28616608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1978213 - 1978106
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| || |||| ||||| ||||||    
T  1978213 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaat 1978114  T
Q  101 taagccta 108  Q
    ||||||||    
T  1978113 taagccta 1978106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11090626 - 11090519
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||  | |||| | |||||| ||||| ||||||| ||||||||||||    
T  11090626 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 11090527  T
Q  101 taagccta 108  Q
    ||| ||||    
T  11090526 taaaccta 11090519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40815450 - 40815347
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  40815450 aatgcaacaaaaatgataattgaagaaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 40815351  T
Q  101 taag 104  Q
    ||||    
T  40815350 taag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14432247 - 14432145
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||||||||||| || || |||||| |||||| ||||| ||||||| ||||||||||||    
T  14432247 aatgcaacaaaaatgatagttgaaggaccgttttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaat 14432148  T
Q  101 taa 103  Q
    |||    
T  14432147 taa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18450935 - 18450829
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||||||||||| ||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  18450935 aatgcaaaaaaaatgataattgaaggaccgttttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 18450836  T
Q  101 taagcct 107  Q
    |||||||    
T  18450835 taagcct 18450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 40027245 - 40027139
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| |||| || ||||||||||||    
T  40027245 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaat 40027146  T
Q  101 taagcct 107  Q
    |||||||    
T  40027145 taagcct 40027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43058438 - 43058333
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| || |||  | ||| || ||||| ||||||||||||||||||||    
T  43058438 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaat 43058339  T
Q  101 taagcc 106  Q
    ||||||    
T  43058338 taagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 239457 - 239350
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| || |||| | |||||| ||||| |||| || ||||||||||||    
T  239457 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaat 239359  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  239358 taagcctaa 239350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 20440473 - 20440581
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||| |||| |||| ||||||| |||||||||||||||||| || |||| | ||| || ||||| ||||||| ||||||||||||||    
T  20440473 tgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaatta 20440572  T
Q  103 agcctaaaa 111  Q
    |||||||||    
T  20440573 agcctaaaa 20440581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 20444852 - 20444748
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||||||||| || |||| | ||| || ||||| ||||||| ||||||||||||||    
T  20444852 tgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaatta 20444753  T
Q  103 agcct 107  Q
    |||||    
T  20444752 agcct 20444748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 35781103 - 35781207
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||||||   ||||||| ||||||||||||||| || || |||| | |||||| ||||| ||||||||||||||||||||    
T  35781103 aatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatcaaaagtgtaat 35781202  T
Q  101 taagc 105  Q
    |||||    
T  35781203 taagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 11090964 - 11091067
Alignment:
Q  5 caacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaag 104  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| ||||||| ||||||||||||||||    
T  11090964 caacaataatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 11091063  T
Q  105 ccta 108  Q
    ||||    
T  11091064 ccta 11091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 28847135 - 28847242
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| || |||| | |||||  ||||| ||||||| ||||| ||||||    
T  28847135 aatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaaatgtaat 28847234  T
Q  101 taagccta 108  Q
    ||||||||    
T  28847235 taagccta 28847242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26538202 - 26538096
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||||||| | || |||| | |||| | ||||| ||||||| ||||||||||||    
T  26538202 aatgcaacaaaaatgataattgaaggaccgctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaat 26538103  T
Q  101 taagcct 107  Q
    |||||||    
T  26538102 taagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 40815785 - 40815895
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||||  | || |||| | |||||| ||||| ||||||| ||||||||||||    
T  40815785 aatgcaacaaaaatgataattgaagggccgttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 40815884  T
Q  101 taagcctaaaa 111  Q
    ||| |||||||    
T  40815885 taaacctaaaa 40815895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14432581 - 14432691
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||| |||||||||| |||||||| || |||||||||| |||| || || |||||| |||||| ||||| ||||||| ||||| ||||||    
T  14432581 aatgcaacaaaaataataattgaagaaccattttattctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaat 14432680  T
Q  101 taagcctaaaa 111  Q
    |||| ||||||    
T  14432681 taaggctaaaa 14432691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 3025571 - 3025463
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||| || |||| | |||||| ||||| ||||||| ||||| ||||||    
T  3025571 aatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T
Q  101 taagcctaa 109  Q
     || |||||    
T  3025471 caaacctaa 3025463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 3025903 - 3026012
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||| |||||||||||||| ||||||| |||||||||||||||| | ||||||| | |||| | ||||| ||||||| ||||| ||||||    
T  3025903 aatgcaacaaaaataataattgaaggaccgttttgtt-tgttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaat 3026000  T
Q  101 taagcctaaaaa 112  Q
    |||||| |||||    
T  3026001 taagccaaaaaa 3026012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8425800 - 8425902
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||  ||||||| | |||||||||||||||| ||||||| | |||||  ||||| || || | ||||||||||||    
T  8425800 aatgcaacaaaaatgataattgaaggacagttttgttctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaat 8425899  T
Q  101 taa 103  Q
    |||    
T  8425900 taa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8972342 - 8972239
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| ||| |||||||| |||||| |||||||| || || |||| | || | | ||||| ||||||| ||||||||||||    
T  8972342 aatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaacacgaggaccaaaagtgtaat 8972243  T
Q  101 taag 104  Q
    ||||    
T  8972242 taag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15551604 - 15551501
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||| ||||||||  ||||||| |||||||||| |||| || || |||| | ||||   ||||| ||||||| ||||||||||||    
T  15551604 aatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 15551505  T
Q  101 taag 104  Q
    ||||    
T  15551504 taag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 15552498 - 15552596
Alignment:
Q  5 caacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaag 104  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||| |||||| |||| | |||||| ||||| |  | || ||||||||||||||||    
T  15552498 caacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 8425459 - 8425358
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||| ||||||||||||||| ||| ||||||| |||||||||| || | || ||||||| | |||||| ||||| || |||| ||||||||||||    
T  8425459 aatgcaacacaaatgataattgaag-accgttttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaat 8425361  T
Q  101 taa 103  Q
    |||    
T  8425360 taa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 103
Target Start/End: Complemental strand, 3822987 - 3822924
Alignment:
Q  40 gttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaa 103  Q
    |||| |||||||||||||||||||||| ||| ||| ||||| |||||| |||||||||||||||    
T  3822987 gtttaaaaagggcaggatcaatttcatgagttggttaaaatgcgaggaccaaaagtgtaattaa 3822924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 38008003 - 38007944
Alignment:
Q  53 aggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaaaa 112  Q
    |||| ||||||| | ||| ||||||||| | |||| ||||||||||||||||||||||||    
T  38008003 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaaaaa 38007944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 20128200 - 20128289
Alignment:
Q  23 aaggaccattttgttatgttttaaaag-ggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaaaaa 112  Q
    |||||| |||||||| || |||||||| || |||| ||||||| | ||| ||| ||||| | |||| ||||||||||||||||||||||||    
T  20128200 aaggacgattttgtt-tgatttaaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaagcctaaaaa 20128289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 4355803 - 4355755
Alignment:
Q  58 caatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcc 106  Q
    ||||||| | ||||||||||||| | |||| ||||||||||||||||||    
T  4355803 caatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagcc 4355755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 16953427 - 16953479
Alignment:
Q  53 aggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagc 105  Q
    |||| ||||||||| ||| ||||||||| | |||| |||||||||||||||||    
T  16953427 aggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 16953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 25336093 - 25336149
Alignment:
Q  53 aggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcctaa 109  Q
    |||| ||||||| | ||| ||||||||| | |||| |||||||||||||||||||||    
T  25336093 aggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaa 25336149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 71; Significance: 5e-32; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 64407 - 64301
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| |||| | |||| ||||||| ||||||| ||||||||||||    
T  64407 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaat 64308  T
Q  101 taagcct 107  Q
    |||||||    
T  64307 taagcct 64301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 64745 - 64847
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||| || |||| | |||| | ||||| ||||||| ||||||||||||    
T  64745 aatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaat 64844  T
Q  101 taa 103  Q
    |||    
T  64845 taa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 205392 - 205355
Alignment:
Q  72 ggtcaaaatacgaggatcaaaagtgtaattaagcctaa 109  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  205392 ggtcaaaatacaaggatcaaaagtgtaattaaacctaa 205355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 210827 - 210884
Alignment:
Q  50 ggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagcct 107  Q
    ||||||| || |||||| ||| |||||||||  ||||| |||||||||||||||||||    
T  210827 ggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagcct 210884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2107 - 2215
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| || |||| | |||||| ||||| ||||||| ||||||||||||    
T  2107 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaat 2206  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  2207 taagcctaa 2215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1772 - 1665
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || |||| | |||||| ||||| | ||||| ||||||||||||    
T  1772 aatgcaacaaaaatgataattgaaggaacattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaat 1673  T
Q  101 taagccta 108  Q
    ||||||||    
T  1672 taagccta 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4898 - 4790
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| ||||||| ||||||||||||    
T  4898 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 4799  T
Q  101 taagcctaa 109  Q
    |||||||||    
T  4798 taagcctaa 4790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5231 - 5334
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||  ||| |||| || |||||||||||| || || || |||| | | |||| ||||| ||||||| ||||||||||||    
T  5231 aatgcaacaaaaatgataattgaattaccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaat 5330  T
Q  101 taag 104  Q
    ||||    
T  5331 taag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 668 - 568
Alignment:
Q  5 caacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaag 104  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||| |||| | |||||| ||||| ||||||||||||||||||||||||    
T  668 caacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaag 569  T
Q  105 c 105  Q
    |    
T  568 c 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 1182 - 1286
Alignment:
Q  2 atgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatt 101  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||| | |||| | ||||| |||||||  ||||||||||||    
T  1182 atgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaatt 1281  T
Q  102 aagcc 106  Q
    |||||    
T  1282 aagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 857 - 755
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||||||||||||| || | || | |||||| ||||| |||| || ||||||||||||    
T  857 aatgcaacaaaa-tgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaat 759  T
Q  101 taag 104  Q
    ||||    
T  758 taag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4647 - 4754
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||| || |||| | |||| | ||||| |||| || ||||||||||||    
T  4647 aatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaat 4746  T
Q  101 taagccta 108  Q
    ||||||||    
T  4747 taagccta 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4308 - 4253
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcagga 56  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  4308 aatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcagga 4253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 19069 - 19171
Alignment:
Q  9 aaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagccta 108  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||  | |||| | |||||| ||||| ||||||| |||||||||||||||||| |    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccaa 19168  T
Q  109 aaa 111  Q
    |||    
T  19169 aaa 19171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18940 - 18834
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| || || |||| | |||||| ||||| |  |||| ||||||||||||    
T  18940 aatgcaacaaaaatgataattgaagcaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaat 18841  T
Q  101 taagcct 107  Q
     ||||||    
T  18840 gaagcct 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42598 - 42707
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||| |||||||||||||| ||||||||| ||||||| |||||||||||||||| |||| |||| | |||||  ||||| ||||||  ||||||| ||||    
T  42598 aatgaaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataat 42697  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  42698 taagcctaaa 42707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 42274 - 42172
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||| |||||||||| |||| | | |||  ||||| ||||| |  |||||||||||    
T  42274 aatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaat 42175  T
Q  101 taa 103  Q
    |||    
T  42174 taa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 134113 - 134222
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||| ||||||||||| | ||||||| ||| ||||||||||| ||  | |||| | |||||| ||||| ||||||| ||||||||||||    
T  134113 aatgcaacaaaaatgttaattgaaggatcgttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 134212  T
Q  101 taagcctaaa 110  Q
    ||||||||||    
T  134213 taagcctaaa 134222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 28685 - 28789
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||||||| || || |||| | |||||| ||||| |||| || ||||||||||||||    
T  28685 tgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaatta 28784  T
Q  103 agcct 107  Q
     ||||    
T  28785 tgcct 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 10312 - 10414
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |  | || |||| | |||||  ||||| ||||||| ||||||||||||    
T  10312 aatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaat 10411  T
Q  101 taa 103  Q
    |||    
T  10412 taa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10037 - 9935
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||| ||||||| |||||||||||||||||||||||| | | ||||||||||| ||||| |||| | | ||||  |||| ||||||| ||||| ||||||    
T  10037 aatgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaat 9938  T
Q  101 taa 103  Q
    |||    
T  9937 taa 9935  T

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Target: scaffold0157 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16936 - 17022
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgagga 87  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||| |||| | |||| ||||||| |||||||    
T  16936 aatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgagga 17022  T

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Target: scaffold0157; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16601 - 16565
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgtt 37  Q
    |||||||||||||||||| |||||||||| |||||||    
T  16601 aatgcaacaaaaatgatacttgaaggaccgttttgtt 16565  T

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Target: scaffold0076 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  3 tgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaatta 102  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||||||| |||| || |||| | |||||  ||||| | || || ||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  103 a 103  Q
    |    
T  8551 a 8551  T

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Target: scaffold0057 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 61903 - 62000
Alignment:
Q  6 aacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaa 103  Q
    ||||||||||||| ||||| ||  |||||||| | ||||||||||| |||| || |||| | |||||  ||||| |||||||||||||||||||||||    
T  61903 aacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

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Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 61102 - 61026
Alignment:
Q  32 tttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaattaagccta 108  Q
    |||||| | |||||||| |||||||||| |||| | |||||| ||||| |||||||||||||||||| |||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagccta 61026  T

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Target: scaffold1696 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 554 - 454
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcaggatcaatttcatcagtaggtcaaaatacgaggatcaaaagtgtaat 100  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||||  || || || |||| | |||||| ||||| |||| || ||||| ||||||    
T  554 aatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttcgtgagtaggccaaaacacgaagaccaaaa-tgtaat 456  T
Q  101 ta 102  Q
    ||    
T  455 ta 454  T

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Target: scaffold1432 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 578 - 614
Alignment:
Q  73 gtcaaaatacgaggatcaaaagtgtaattaagcctaa 109  Q
    |||||||| ||||||||||||||||||||||||||||    
T  578 gtcaaaatgcgaggatcaaaagtgtaattaagcctaa 614  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7728 - 7783
Alignment:
Q  1 aatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagggcagga 56  Q
    ||||||||||||||||||| |||| |||  ||||||| ||||||||||||| ||||    
T  7728 aatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaagga 7783  T

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