View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9881_low_6 (Length: 579)
Name: NF9881_low_6
Description: NF9881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9881_low_6 |
 |  |
|
| [»] scaffold0170 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 398; Significance: 0; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 1 - 561
Target Start/End: Original strand, 25131544 - 25132111
Alignment:
| Q |
1 |
gagtcactgagagtgggagagtcacgataagttagagaaggagaagactgaaaaatagaacatttttacacgcctgaacatttgcctcaattttgcc--- |
97 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25131544 |
gagtcactgagagagggagagtcactataagttagagaaggagaagactgaaaaataga-catttttacacgcctgaacatttgcctcaattttgcccgg |
25131642 |
T |
 |
| Q |
98 |
tcnnnnnnnnnnnaagtaaagaatatggctattgggctgggcttccaacatagaaagcagaagcagagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25131643 |
tttttttttttttaagtaaagaatatggctattgggttgggcttccaacattgaaagcagaagcagagcctgggcactagcccaggctagctggggggtg |
25131742 |
T |
 |
| Q |
198 |
taatcgcccatgttcatggctagtgcacgtgggccagcagagtgggtgggatgcaggaggcagaatggcctgaaaagaggtcaaaattgattttgctgaa |
297 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25131743 |
taatcgcccatgttcatggctagtgcacgtgggccagcagagtgggtgggatgcagg---cagaatggcctgaaaagaggtcaaaattgattttgctgaa |
25131839 |
T |
 |
| Q |
298 |
gaaggatatcaaggaaaggaggtttaggtagtatagaataagttgcgtagtgttatacctaaggaagtgtctgtaaaataataatgtatttgaggaaaat |
397 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
25131840 |
gaaggatatcaaggaaaggaggtttaggtagtatagaataagttgcgtaatgttatacctaaggaagtgtcagtaaaataatcatgtatttgaggaaaat |
25131939 |
T |
 |
| Q |
398 |
aatgtaacggtgggacctggtcattaggcctgtcgggaacaatgagtcttgtatgttggaaatgccgaggcttgggaaacctgagtgtggt--------t |
489 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
25131940 |
aatgtaacggtgggacctggtcattaggcttgttgggaacaatgagtcttgtatgttggaaatgctgaggcttgggaaacctgagtgtggttcctattat |
25132039 |
T |
 |
| Q |
490 |
cctatactaaaattcatagtccaacattataagctggatattctatttttaagtgggccccttgtccacatt |
561 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
25132040 |
cctatactaaaattcatagtccggtattataagttggatgttctatttttaagtgggttccttgtccacatt |
25132111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 39531221 - 39531150
Alignment:
| Q |
124 |
ggctattgggctgggcttccaacatagaaagcagaagcagagcatgggcactagcccaggctagctgggggg |
195 |
Q |
| |
|
|||||||||| ||||||| | || | |||| ||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
39531221 |
ggctattgggttgggcttttagcaaacaaagtagaagtagagcctgggcactagcccaggctagctgggggg |
39531150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 36406640 - 36406674
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
36406640 |
gagcctgggcactagcccaggctagctggggggtg |
36406674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13569932 - 13570028
Alignment:
| Q |
1 |
gagtcactgagagtgggagagtcacgataagttagagaaggagaagactgaaaaatagaacatttttacacgcctgaacatttgcctcaattttgcc |
97 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13569932 |
gagtcactaagagagggagagtcacgataagttagagaaggagaagactgaaaaatagaacatttttacacgcctgaacatttgcctcaattttgcc |
13570028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 10802355 - 10802516
Alignment:
| Q |
1 |
gagtcactgagagtgggagagtcacgataagttagagaaggagaagactgaaaaatagaacatttttacacgcctgaacatttgcctcaattttgcc--- |
97 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10802355 |
gagtcactaagagagggagagtcacgataagttagagaaggagaagactgaaaaatagaacatttttacacg-ctgaacatttgcctcaattttgcccat |
10802453 |
T |
 |
| Q |
98 |
---tcnnnnnnnnnnnaagtaaagaatatggctattgggctgggcttccaacatagaaagcag |
157 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10802454 |
ttttttatttttttttaagtaaagaatatggctattgggctgggcttccaacatagaaagcag |
10802516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 480
Target Start/End: Complemental strand, 25598896 - 25598814
Alignment:
| Q |
398 |
aatgtaacggtgggacctggtcattaggcctgtcgggaacaatgagtcttgtatgttggaaatgccgaggcttgggaaacctg |
480 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||| || |||||||| | || |||||| ||||||||| ||||||||||| |
|
|
| T |
25598896 |
aatgtaacggtgggacctgctcaacaggcctgtcgagaccaatgagtactatagcttggaattgccgaggcctgggaaacctg |
25598814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 44305415 - 44305354
Alignment:
| Q |
136 |
gggcttccaacatagaaagcagaagcagagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||||||| ||| |||||| | ||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
44305415 |
gggcttcctacaaagaaagttggagctgagcctgggcactagcccaggctagctggggggtg |
44305354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 37154104 - 37154163
Alignment:
| Q |
138 |
gcttccaacatagaaagcagaagcagagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||||| ||| |||||| | ||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
37154104 |
gcttcctacaaagaaagttggagctgagcctgggcactagcccaggctagctggggggtg |
37154163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 6331668 - 6331620
Alignment:
| Q |
145 |
acatagaaagcagaagcagagcatgggcactagcccaggctagctgggg |
193 |
Q |
| |
|
|||||||||| | ||| |||| |||||||||||||||||||||||||| |
|
|
| T |
6331668 |
acatagaaagttggagccgagcctgggcactagcccaggctagctgggg |
6331620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 539
Target Start/End: Original strand, 32657770 - 32657917
Alignment:
| Q |
392 |
gaaaataatgtaacggtgggacctggtcattaggcctgtcgggaacaatgagtcttgtatgttggaaatgccgaggcttgggaaacctgagtgtggttcc |
491 |
Q |
| |
|
|||||||||||||||| |||||| | | ||||||| || ||| |||||||||||||| |||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
32657770 |
gaaaataatgtaacggcaggacctaataaccaggcctgacgagaaaaatgagtcttgtattttggaactgccgaggcttgggaaacctgagtgtagttcc |
32657869 |
T |
 |
| Q |
492 |
tatactaaaattcatagtccaacattataagctggatattctattttt |
539 |
Q |
| |
|
|| |||||||||| |||||| | ||||||||| |||| | |||||||| |
|
|
| T |
32657870 |
taaactaaaattcctagtccgatattataagccggatgtcctattttt |
32657917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 31985832 - 31985751
Alignment:
| Q |
124 |
ggctattgggctgggcttccaacatagaaagcagaagcagagcatgggcactagcccaggctagctggggggtgtaatcgcc |
205 |
Q |
| |
|
|||||||||| ||||||| | || | |||| ||||||||||| |||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
31985832 |
ggctattgggttgggcttttaccaaacaaagtagaagcagagcccgggcaccagcccaggctagctggggggtgtagtcgcc |
31985751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 454
Target Start/End: Complemental strand, 32658192 - 32658130
Alignment:
| Q |
392 |
gaaaataatgtaacggtgggacctggtcattaggcctgtcgggaacaatgagtcttgtatgtt |
454 |
Q |
| |
|
|||||||||||||||| |||||||||| | ||||||| || |||||| |||||||||||||| |
|
|
| T |
32658192 |
gaaaataatgtaacggcgggacctggtaaccaggcctgccgagaacaacgagtcttgtatgtt |
32658130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 485
Target Start/End: Original strand, 15786041 - 15786117
Alignment:
| Q |
409 |
gggacctggtcattaggcctgtcgggaacaatgagtcttgtatgttggaaatgccgaggcttgggaaacctgagtgt |
485 |
Q |
| |
|
|||||||||||| ||||||| ||||| |||||||| ||||| ||||| ||||||||| ||||||||||| |||| |
|
|
| T |
15786041 |
gggacctggtcaccaggcctgccgggatcaatgagttttgtagcatggaattgccgaggcctgggaaacctgcgtgt |
15786117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 43585125 - 43585081
Alignment:
| Q |
151 |
aaagcagaagcagagcatgggcactagcccaggctagctgggggg |
195 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
43585125 |
aaagcagaagctgagcccgggcactagcccaggctagctgggggg |
43585081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 44625680 - 44625646
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
44625680 |
gagcctgggcactagcccaggctagctggggggtg |
44625646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 53707181 - 53707111
Alignment:
| Q |
124 |
ggctattgggctgggcttccaacatagaaagcagaagcagagcatgggcactagcccaggctagctggggg |
194 |
Q |
| |
|
|||||||||| ||||||| | || | |||| ||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
53707181 |
ggctattgggttgggcttttaccaaacaaagtagaagcagagcccgggcattagcccaggctagctggggg |
53707111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 197
Target Start/End: Complemental strand, 7500912 - 7500883
Alignment:
| Q |
168 |
tgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
7500912 |
tgggcactagcccaggctagctggggggtg |
7500883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0170 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0170
Description:
Target: scaffold0170; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 7829 - 7731
Alignment:
| Q |
1 |
gagtcactgagagtgggagagtcacgataagttagagaaggagaagactgaaaaatagaacattttta--cacgcctgaacatttgcctcaattttgcc |
97 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||| |||| || | |||||||||||||||||||||| |||| |
|
|
| T |
7829 |
gagtcactgagagagggagagtcacgttaagttagagaaggagaagaccgaaaaatagaaaatttgtatgcgcgcctgaacatttgcctcaattctgcc |
7731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000008; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 544
Target Start/End: Complemental strand, 9541020 - 9540919
Alignment:
| Q |
443 |
gtcttgtatgttggaaatgccgaggcttgggaaacctgagtgtggttcctatactaaaattcatagtccaacattataagctggatattctatttttaag |
542 |
Q |
| |
|
|||||||||||||||| ||| |||| || ||||||| ||||| ||| || ||||||||| |||||||| ||||||| ||||| |||| |||||||| |
|
|
| T |
9541020 |
gtcttgtatgttggaactgctgaggtatgagaaacctaagtgttgtttctcaactaaaatttatagtccagtattataatttggatgttctgtttttaag |
9540921 |
T |
 |
| Q |
543 |
tg |
544 |
Q |
| |
|
|| |
|
|
| T |
9540920 |
tg |
9540919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 1585713 - 1585655
Alignment:
| Q |
136 |
gggcttccaacatagaaagcagaagcagagcatgggcactagcccaggctagctggggg |
194 |
Q |
| |
|
|||||| | ||| |||||| ||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
1585713 |
gggcttgctacaaagaaagttgaagctgagcctgggcactagcccaggctagctggggg |
1585655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 10715631 - 10715597
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
10715631 |
gagcctgggcactagcccaggctagctggggggtg |
10715597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 10929401 - 10929367
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
10929401 |
gagcctgggcactagcccaggctagctggggggtg |
10929367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 197
Target Start/End: Original strand, 2017581 - 2017610
Alignment:
| Q |
168 |
tgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
2017581 |
tgggcactagcccaggctagctggggggtg |
2017610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 4552162 - 4552130
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctgggggg |
195 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |
|
|
| T |
4552162 |
gagcctgggcactagcccaggctagctgggggg |
4552130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 485
Target Start/End: Original strand, 8720708 - 8720784
Alignment:
| Q |
409 |
gggacctggtcattaggcctgtcgggaacaatgagtcttgtatgttggaaatgccgaggcttgggaaacctgagtgt |
485 |
Q |
| |
|
|||||||||||| ||||||| ||||| |||||||| ||||| ||||| ||||||||| ||||||||||| |||| |
|
|
| T |
8720708 |
gggacctggtcaccaggcctgccgggaccaatgagttttgtagcatggaattgccgaggcctgggaaacctgcgtgt |
8720784 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 30248941 - 30248907
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
30248941 |
gagcctgggcactagcccaggctagctggggggtg |
30248907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 34443942 - 34443908
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
34443942 |
gagcctgggcactagcccaggctagctggggggtg |
34443908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 34846331 - 34846297
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
34846331 |
gagcctgggcactagcccaggctagctggggggtg |
34846297 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 195
Target Start/End: Complemental strand, 2476380 - 2476348
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctgggggg |
195 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |
|
|
| T |
2476380 |
gagcctgggcactagcccaggctagctgggggg |
2476348 |
T |
 |
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Target: chr7 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 35300579 - 35300613
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
35300579 |
gagcctgggcactagcccaggctagctggggggtg |
35300613 |
T |
 |
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Target: chr6 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 10397931 - 10397965
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
10397931 |
gagcctgggcactagcccaggctagctggggggtg |
10397965 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 23663898 - 23663932
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
23663898 |
gagcctgggcactagcccaggctagctggggggtg |
23663932 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 13203744 - 13203710
Alignment:
| Q |
163 |
gagcatgggcactagcccaggctagctggggggtg |
197 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
13203744 |
gagcctgggcactagcccaggctagctggggggtg |
13203710 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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