View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9882_low_3 (Length: 330)
Name: NF9882_low_3
Description: NF9882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9882_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 5 - 306
Target Start/End: Original strand, 36027085 - 36027376
Alignment:
| Q |
5 |
tgaaggactgatatgcatgtacgtatacatacatacatatatgcttgtgtctaattcgacttaactctctctcagtcattcactgatatatagatactat |
104 |
Q |
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| T |
36027085 |
tgaaggactgatatgcatgtacgtatac----atacatatatgcttgtgtctaattggacttaactttctctcagtcattcactgatatatagatactat |
36027180 |
T |
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| Q |
105 |
ttctgattgagacaattaatactttctcctaggctcctccattggtcgtttatttccaatatcccttcccatgcaaatttcattatgacaactatcatgg |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36027181 |
ttctgattgagacaattaatactttctcctaggctcctccattggtcgtttatttccaatatcccttcccatgcaaatttcattatgacaactatcatgg |
36027280 |
T |
|
| Q |
205 |
attggatgcnnnnnnnnnnnnnngtccttcacttttttggtattggttagcttagtttatgtggactttgtattgtaccacattcacattaattgagaat |
304 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36027281 |
attggatgc------atatatatgtccttcacttttttggtattggttagcttagtttatgtggactttgtattgtaccacattcacattaattgagaat |
36027374 |
T |
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