View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9884_low_31 (Length: 279)

Name: NF9884_low_31
Description: NF9884
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9884_low_31
NF9884_low_31
[»] chr4 (70 HSPs)
chr4 (5-100)||(36081904-36081999)
chr4 (1-95)||(53763699-53763793)
chr4 (1-95)||(41170861-41170955)
chr4 (1-65)||(46355209-46355273)
chr4 (1-98)||(18874809-18874906)
chr4 (1-101)||(9096026-9096125)
chr4 (1-97)||(46799845-46799940)
chr4 (1-65)||(50291371-50291435)
chr4 (1-65)||(53781755-53781819)
chr4 (1-99)||(24310405-24310503)
chr4 (1-94)||(52636331-52636425)
chr4 (1-65)||(29577354-29577418)
chr4 (1-65)||(46791909-46791973)
chr4 (2-97)||(32574367-32574462)
chr4 (1-67)||(4896416-4896482)
chr4 (1-79)||(9827889-9827967)
chr4 (1-63)||(21766636-21766698)
chr4 (1-63)||(25936329-25936391)
chr4 (1-95)||(43864122-43864216)
chr4 (1-87)||(43982986-43983072)
chr4 (1-95)||(45678352-45678446)
chr4 (57-94)||(12297239-12297276)
chr4 (1-65)||(3475957-3476021)
chr4 (1-65)||(4878056-4878120)
chr4 (1-65)||(5208245-5208309)
chr4 (1-65)||(6126942-6127006)
chr4 (1-65)||(7037402-7037466)
chr4 (1-65)||(9032869-9032933)
chr4 (5-41)||(11493123-11493159)
chr4 (1-101)||(18634790-18634890)
chr4 (9-65)||(18944382-18944438)
chr4 (1-65)||(19807336-19807400)
chr4 (1-65)||(27001327-27001391)
chr4 (5-97)||(32079202-32079294)
chr4 (1-65)||(37775345-37775409)
chr4 (1-97)||(43358702-43358797)
chr4 (1-65)||(44368120-44368184)
chr4 (1-65)||(47106000-47106064)
chr4 (1-65)||(51377211-51377275)
chr4 (5-60)||(32294675-32294730)
chr4 (3-98)||(36110225-36110320)
chr4 (1-60)||(48650179-48650238)
chr4 (1-60)||(54801410-54801469)
chr4 (3-65)||(1728007-1728069)
chr4 (1-79)||(1987617-1987695)
chr4 (1-63)||(3223078-3223140)
chr4 (1-71)||(15596485-15596555)
chr4 (46-88)||(25840613-25840655)
chr4 (1-31)||(38844442-38844472)
chr4 (1-31)||(46309075-46309105)
chr4 (1-34)||(6686135-6686168)
chr4 (1-54)||(8455992-8456045)
chr4 (1-34)||(10096691-10096724)
chr4 (49-98)||(20760252-20760301)
chr4 (49-98)||(20766643-20766692)
chr4 (1-82)||(33914239-33914320)
chr4 (1-34)||(34027985-34028018)
chr4 (1-38)||(38952778-38952815)
chr4 (1-34)||(42854030-42854063)
chr4 (1-65)||(4949152-4949216)
chr4 (1-65)||(8026682-8026746)
chr4 (5-65)||(8614275-8614335)
chr4 (62-94)||(12297393-12297425)
chr4 (1-65)||(15638219-15638283)
chr4 (1-29)||(33438134-33438162)
chr4 (1-65)||(33484024-33484088)
chr4 (5-96)||(34259918-34260010)
chr4 (7-87)||(36488366-36488445)
chr4 (1-65)||(39699385-39699449)
chr4 (9-97)||(48791487-48791575)
[»] chr3 (68 HSPs)
chr3 (195-268)||(45633596-45633669)
chr3 (1-96)||(1834595-1834690)
chr3 (1-87)||(49886752-49886838)
chr3 (1-96)||(47683879-47683974)
chr3 (1-98)||(9027702-9027799)
chr3 (1-70)||(21481853-21481922)
chr3 (1-98)||(44689892-44689989)
chr3 (1-95)||(43149231-43149325)
chr3 (1-65)||(2935429-2935493)
chr3 (1-77)||(25559793-25559869)
chr3 (1-97)||(27198040-27198136)
chr3 (1-65)||(29555759-29555823)
chr3 (1-65)||(48117425-48117489)
chr3 (1-65)||(51385358-51385422)
chr3 (5-100)||(43460481-43460576)
chr3 (5-96)||(50025572-50025663)
chr3 (1-99)||(11327197-11327295)
chr3 (1-95)||(33971972-33972066)
chr3 (96-138)||(45633726-45633768)
chr3 (1-66)||(44127109-44127174)
chr3 (1-65)||(9158954-9159018)
chr3 (1-65)||(13159750-13159814)
chr3 (1-65)||(14838963-14839027)
chr3 (1-65)||(16295553-16295617)
chr3 (7-79)||(29533856-29533928)
chr3 (1-65)||(34021381-34021445)
chr3 (1-65)||(35368700-35368764)
chr3 (1-65)||(36819045-36819109)
chr3 (1-65)||(49361755-49361819)
chr3 (1-65)||(54233419-54233483)
chr3 (49-96)||(19150344-19150391)
chr3 (1-60)||(50745638-50745697)
chr3 (1-31)||(1295421-1295451)
chr3 (1-59)||(2280266-2280324)
chr3 (1-63)||(7351558-7351620)
chr3 (1-99)||(11173539-11173636)
chr3 (1-67)||(11574643-11574709)
chr3 (1-31)||(28300598-28300628)
chr3 (1-95)||(31300891-31300985)
chr3 (5-87)||(32931814-32931896)
chr3 (1-79)||(34208356-34208434)
chr3 (57-99)||(38359339-38359381)
chr3 (1-54)||(7143-7196)
chr3 (1-34)||(622408-622441)
chr3 (1-54)||(20714332-20714385)
chr3 (1-38)||(39932232-39932269)
chr3 (58-99)||(39995393-39995434)
chr3 (2-63)||(43220062-43220123)
chr3 (1-34)||(44334750-44334783)
chr3 (1-38)||(44972822-44972859)
chr3 (1-34)||(45966702-45966735)
chr3 (21-98)||(47783684-47783761)
chr3 (1-54)||(49457654-49457707)
chr3 (1-65)||(8066444-8066507)
chr3 (1-97)||(20380776-20380871)
chr3 (1-29)||(20549339-20549367)
chr3 (1-65)||(23906905-23906969)
chr3 (1-97)||(27276823-27276919)
chr3 (1-65)||(28263634-28263698)
chr3 (1-65)||(29846809-29846873)
chr3 (1-65)||(30400074-30400138)
chr3 (1-65)||(37215149-37215213)
chr3 (56-96)||(41448208-41448248)
chr3 (1-65)||(41877777-41877841)
chr3 (1-65)||(44593055-44593119)
chr3 (1-97)||(46473217-46473312)
chr3 (1-65)||(48205134-48205198)
chr3 (1-65)||(48490431-48490495)
[»] chr1 (68 HSPs)
chr1 (9-95)||(3919395-3919481)
chr1 (1-99)||(39815435-39815530)
chr1 (1-65)||(37947138-37947202)
chr1 (3-97)||(7420725-7420819)
chr1 (1-63)||(8577422-8577484)
chr1 (1-87)||(36794704-36794790)
chr1 (1-65)||(835960-836024)
chr1 (1-100)||(46903559-46903658)
chr1 (7-96)||(29094635-29094724)
chr1 (1-98)||(31244620-31244717)
chr1 (1-65)||(578893-578957)
chr1 (1-65)||(27787578-27787642)
chr1 (1-65)||(30414953-30415017)
chr1 (1-65)||(48962075-48962139)
chr1 (1-96)||(21255672-21255767)
chr1 (1-103)||(22331438-22331540)
chr1 (1-66)||(13813647-13813712)
chr1 (1-66)||(32966356-32966421)
chr1 (5-65)||(644789-644849)
chr1 (1-65)||(1100306-1100370)
chr1 (4-60)||(5574198-5574254)
chr1 (1-65)||(23399907-23399971)
chr1 (1-65)||(41564798-41564862)
chr1 (1-65)||(41885810-41885874)
chr1 (1-65)||(50035456-50035520)
chr1 (1-65)||(50796091-50796154)
chr1 (13-96)||(7423115-7423197)
chr1 (1-96)||(37741839-37741934)
chr1 (1-96)||(40239998-40240093)
chr1 (1-100)||(43640870-43640969)
chr1 (1-96)||(44161673-44161768)
chr1 (8-59)||(49615199-49615250)
chr1 (1-63)||(4618733-4618795)
chr1 (1-79)||(6396416-6396494)
chr1 (1-87)||(43105194-43105280)
chr1 (1-87)||(47059786-47059872)
chr1 (49-87)||(49931561-49931599)
chr1 (1-34)||(2827659-2827692)
chr1 (1-34)||(4511726-4511759)
chr1 (1-54)||(4604618-4604671)
chr1 (1-34)||(11068514-11068547)
chr1 (1-38)||(11097829-11097866)
chr1 (1-98)||(17167938-17168035)
chr1 (1-54)||(25995549-25995602)
chr1 (1-54)||(26501384-26501437)
chr1 (1-34)||(32939235-32939268)
chr1 (1-34)||(33422168-33422201)
chr1 (1-54)||(42843273-42843326)
chr1 (1-34)||(44112543-44112576)
chr1 (1-34)||(48325311-48325344)
chr1 (1-54)||(50527986-50528039)
chr1 (1-62)||(51436352-51436413)
chr1 (1-34)||(52369060-52369093)
chr1 (1-65)||(6829703-6829767)
chr1 (1-29)||(7203798-7203826)
chr1 (1-29)||(15182537-15182565)
chr1 (1-53)||(27578271-27578323)
chr1 (1-65)||(27954317-27954381)
chr1 (1-65)||(28457265-28457329)
chr1 (1-65)||(29489277-29489341)
chr1 (49-97)||(30535989-30536037)
chr1 (1-65)||(31290126-31290190)
chr1 (1-65)||(36669288-36669352)
chr1 (1-65)||(39010903-39010967)
chr1 (1-29)||(40612203-40612231)
chr1 (1-97)||(42829195-42829290)
chr1 (57-97)||(44672063-44672103)
chr1 (1-29)||(50460666-50460694)
[»] chr7 (46 HSPs)
chr7 (5-96)||(7295560-7295651)
chr7 (1-65)||(23034231-23034295)
chr7 (1-65)||(44185265-44185329)
chr7 (1-65)||(29923760-29923823)
chr7 (1-65)||(30864335-30864399)
chr7 (1-65)||(37385151-37385215)
chr7 (1-65)||(37970022-37970086)
chr7 (1-65)||(41910103-41910167)
chr7 (3-98)||(47945074-47945169)
chr7 (3-98)||(47950504-47950599)
chr7 (1-99)||(40693412-40693510)
chr7 (1-87)||(41538569-41538655)
chr7 (1-65)||(2600452-2600516)
chr7 (1-65)||(22331129-22331193)
chr7 (1-65)||(24380639-24380703)
chr7 (1-65)||(25272680-25272744)
chr7 (1-65)||(27704524-27704588)
chr7 (1-61)||(27866459-27866519)
chr7 (5-65)||(32315919-32315979)
chr7 (1-65)||(33050272-33050336)
chr7 (1-61)||(39533308-39533367)
chr7 (1-65)||(42431812-42431876)
chr7 (1-97)||(44187780-44187876)
chr7 (1-65)||(48639303-48639367)
chr7 (1-65)||(49142435-49142499)
chr7 (1-60)||(41227164-41227223)
chr7 (5-64)||(47379653-47379712)
chr7 (7-77)||(384646-384716)
chr7 (1-59)||(640481-640539)
chr7 (1-31)||(2323382-2323412)
chr7 (1-87)||(2346955-2347041)
chr7 (1-31)||(11070317-11070347)
chr7 (1-87)||(46148255-46148341)
chr7 (1-67)||(48866846-48866912)
chr7 (44-97)||(9363385-9363438)
chr7 (1-65)||(45335951-45336016)
chr7 (1-38)||(48086948-48086985)
chr7 (1-29)||(1709373-1709401)
chr7 (1-41)||(8061687-8061727)
chr7 (1-65)||(12141973-12142037)
chr7 (1-65)||(33464955-33465019)
chr7 (1-97)||(37392132-37392228)
chr7 (1-65)||(38197750-38197814)
chr7 (1-65)||(38978581-38978645)
chr7 (1-65)||(39369391-39369455)
chr7 (1-29)||(48522245-48522273)
[»] chr8 (61 HSPs)
chr8 (1-95)||(34247863-34247957)
chr8 (1-92)||(1422593-1422684)
chr8 (1-94)||(9305886-9305979)
chr8 (1-66)||(32234369-32234434)
chr8 (1-65)||(25430735-25430799)
chr8 (1-96)||(8233383-8233478)
chr8 (1-96)||(18550068-18550163)
chr8 (1-100)||(41776264-41776363)
chr8 (5-98)||(42651013-42651106)
chr8 (1-65)||(23709065-23709129)
chr8 (1-65)||(27300435-27300499)
chr8 (9-97)||(33511698-33511786)
chr8 (1-65)||(34838188-34838252)
chr8 (7-65)||(35701761-35701819)
chr8 (4-98)||(45405720-45405814)
chr8 (1-38)||(9985623-9985660)
chr8 (1-54)||(12045582-12045635)
chr8 (55-100)||(20996178-20996223)
chr8 (1-65)||(2597078-2597142)
chr8 (1-65)||(4148573-4148637)
chr8 (1-65)||(5925144-5925208)
chr8 (1-65)||(20994976-20995040)
chr8 (1-65)||(28713182-28713246)
chr8 (1-65)||(28720529-28720593)
chr8 (1-65)||(28728171-28728235)
chr8 (1-65)||(30927849-30927913)
chr8 (1-65)||(37471732-37471796)
chr8 (8-95)||(102344-102431)
chr8 (1-92)||(3394593-3394684)
chr8 (1-31)||(295635-295665)
chr8 (1-59)||(5742581-5742639)
chr8 (1-91)||(6825169-6825259)
chr8 (1-99)||(22836023-22836121)
chr8 (1-31)||(32725734-32725764)
chr8 (1-54)||(5924899-5924952)
chr8 (1-34)||(11180397-11180430)
chr8 (1-54)||(14548754-14548807)
chr8 (5-82)||(24616438-24616515)
chr8 (58-99)||(29107991-29108032)
chr8 (1-98)||(32674117-32674214)
chr8 (1-54)||(34765779-34765832)
chr8 (1-38)||(35633914-35633951)
chr8 (1-54)||(35967335-35967388)
chr8 (1-34)||(37294683-37294716)
chr8 (1-34)||(39359825-39359858)
chr8 (1-34)||(41304931-41304964)
chr8 (4-65)||(43605587-43605648)
chr8 (1-38)||(44380559-44380596)
chr8 (47-87)||(2261481-2261521)
chr8 (1-65)||(6243123-6243187)
chr8 (1-101)||(9227358-9227458)
chr8 (1-65)||(19723124-19723188)
chr8 (1-65)||(21273628-21273692)
chr8 (1-65)||(22203133-22203197)
chr8 (1-65)||(22767219-22767283)
chr8 (1-65)||(28156292-28156356)
chr8 (5-65)||(28623043-28623103)
chr8 (1-29)||(33415665-33415693)
chr8 (49-97)||(35792067-35792115)
chr8 (1-53)||(41273604-41273656)
chr8 (57-89)||(43597768-43597800)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-98)||(48743-48840)
[»] chr5 (57 HSPs)
chr5 (1-94)||(12612906-12612999)
chr5 (1-100)||(17574107-17574206)
chr5 (5-62)||(5043018-5043075)
chr5 (3-60)||(35616724-35616781)
chr5 (1-65)||(2863638-2863702)
chr5 (1-65)||(5005202-5005266)
chr5 (1-65)||(31625994-31626058)
chr5 (1-100)||(19127213-19127311)
chr5 (1-96)||(42364518-42364613)
chr5 (7-61)||(22653734-22653788)
chr5 (1-67)||(28811517-28811583)
chr5 (7-65)||(37821059-37821117)
chr5 (7-65)||(38919941-38919999)
chr5 (3-65)||(39032522-39032584)
chr5 (1-65)||(3518272-3518336)
chr5 (1-65)||(4173042-4173106)
chr5 (1-65)||(9594567-9594631)
chr5 (1-65)||(9957119-9957183)
chr5 (1-65)||(12401281-12401345)
chr5 (1-65)||(15622133-15622197)
chr5 (3-59)||(20040877-20040933)
chr5 (1-65)||(33823612-33823676)
chr5 (1-65)||(35358853-35358917)
chr5 (1-65)||(35595904-35595968)
chr5 (2-66)||(41210431-41210495)
chr5 (1-65)||(43152978-43153042)
chr5 (2-65)||(28501707-28501770)
chr5 (1-96)||(41460205-41460300)
chr5 (1-99)||(8955542-8955640)
chr5 (1-79)||(10469851-10469929)
chr5 (1-99)||(26626704-26626801)
chr5 (1-99)||(33893675-33893773)
chr5 (1-95)||(39595363-39595456)
chr5 (5-34)||(1108091-1108120)
chr5 (1-34)||(1760450-1760483)
chr5 (1-66)||(4954555-4954620)
chr5 (1-54)||(5698257-5698310)
chr5 (1-34)||(8442248-8442281)
chr5 (1-66)||(11464040-11464105)
chr5 (1-54)||(11880916-11880969)
chr5 (1-54)||(14914459-14914512)
chr5 (1-54)||(22920421-22920474)
chr5 (1-54)||(25345427-25345480)
chr5 (1-97)||(30103339-30103433)
chr5 (4-65)||(39458733-39458794)
chr5 (1-65)||(125181-125245)
chr5 (1-65)||(3263426-3263490)
chr5 (1-65)||(8959249-8959313)
chr5 (1-65)||(9596732-9596796)
chr5 (1-65)||(12512882-12512946)
chr5 (1-97)||(17063954-17064050)
chr5 (1-65)||(17489437-17489501)
chr5 (1-29)||(19437346-19437374)
chr5 (1-65)||(27392620-27392684)
chr5 (1-29)||(29803312-29803340)
chr5 (1-29)||(36786212-36786240)
chr5 (1-65)||(40201038-40201102)
[»] chr2 (60 HSPs)
chr2 (5-96)||(35518368-35518459)
chr2 (1-65)||(30340082-30340147)
chr2 (1-96)||(8757633-8757728)
chr2 (1-96)||(22296016-22296111)
chr2 (1-63)||(4114352-4114414)
chr2 (1-99)||(6742294-6742392)
chr2 (5-66)||(26273267-26273328)
chr2 (1-104)||(11084805-11084908)
chr2 (1-87)||(694358-694444)
chr2 (1-87)||(24491573-24491659)
chr2 (1-87)||(37631263-37631349)
chr2 (1-63)||(38598269-38598331)
chr2 (1-79)||(43026025-43026103)
chr2 (1-38)||(4263809-4263846)
chr2 (1-54)||(21805715-21805768)
chr2 (1-65)||(23141442-23141507)
chr2 (1-65)||(23553232-23553297)
chr2 (1-66)||(36383551-36383616)
chr2 (5-65)||(1151622-1151682)
chr2 (7-63)||(3366126-3366182)
chr2 (1-65)||(11828738-11828802)
chr2 (1-65)||(12256990-12257054)
chr2 (1-65)||(16463381-16463445)
chr2 (1-65)||(23048001-23048065)
chr2 (5-65)||(26387749-26387809)
chr2 (5-65)||(27307163-27307223)
chr2 (1-61)||(27329031-27329091)
chr2 (1-65)||(34141532-34141596)
chr2 (1-65)||(35705835-35705899)
chr2 (1-65)||(37064147-37064211)
chr2 (1-65)||(45202050-45202114)
chr2 (46-97)||(28508477-28508528)
chr2 (9-96)||(32755775-32755862)
chr2 (1-99)||(35007985-35008083)
chr2 (1-96)||(36763407-36763502)
chr2 (2-65)||(37966446-37966509)
chr2 (1-79)||(304896-304974)
chr2 (1-63)||(1277820-1277882)
chr2 (1-31)||(7086076-7086106)
chr2 (1-63)||(17999833-17999895)
chr2 (1-31)||(23344941-23344971)
chr2 (1-59)||(34373097-34373155)
chr2 (1-99)||(35203633-35203731)
chr2 (1-63)||(38027535-38027597)
chr2 (1-31)||(42081126-42081156)
chr2 (1-34)||(546334-546367)
chr2 (1-38)||(4842464-4842501)
chr2 (50-87)||(11175143-11175180)
chr2 (8-100)||(3839506-3839598)
chr2 (7-63)||(5852553-5852609)
chr2 (1-65)||(9384464-9384528)
chr2 (1-65)||(13881184-13881248)
chr2 (1-65)||(14021309-14021373)
chr2 (1-29)||(18508167-18508195)
chr2 (1-29)||(18749317-18749345)
chr2 (1-65)||(33857306-33857370)
chr2 (1-65)||(37076742-37076806)
chr2 (1-65)||(43205182-43205246)
chr2 (1-65)||(44484574-44484638)
chr2 (5-65)||(44897719-44897779)
[»] chr6 (27 HSPs)
chr6 (1-99)||(608545-608643)
chr6 (1-98)||(23653778-23653875)
chr6 (5-65)||(7304023-7304083)
chr6 (1-65)||(17442911-17442975)
chr6 (1-100)||(19713083-19713182)
chr6 (1-97)||(22422239-22422335)
chr6 (1-66)||(12044419-12044484)
chr6 (1-96)||(6997437-6997532)
chr6 (1-63)||(34792095-34792157)
chr6 (1-34)||(11742933-11742966)
chr6 (1-54)||(16743195-16743248)
chr6 (1-65)||(9395255-9395319)
chr6 (1-67)||(1897775-1897841)
chr6 (1-67)||(2582751-2582817)
chr6 (1-55)||(21443777-21443831)
chr6 (1-67)||(32457168-32457234)
chr6 (1-66)||(11017471-11017536)
chr6 (1-97)||(28548907-28549003)
chr6 (1-54)||(32644701-32644754)
chr6 (5-65)||(1803962-1804022)
chr6 (1-65)||(2165218-2165282)
chr6 (1-65)||(2176851-2176915)
chr6 (1-29)||(3339453-3339481)
chr6 (1-65)||(10557498-10557562)
chr6 (1-61)||(27790157-27790217)
chr6 (1-29)||(28883700-28883728)
chr6 (1-53)||(33491827-33491879)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-63)||(88897-88959)
[»] scaffold0514 (1 HSPs)
scaffold0514 (1-65)||(1765-1829)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-65)||(3032-3096)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-65)||(145140-145200)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-65)||(147174-147238)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-64)||(9767-9830)
[»] scaffold0076 (1 HSPs)
scaffold0076 (4-67)||(11284-11347)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-63)||(23209-23271)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-54)||(24762-24815)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-34)||(14498-14531)
[»] scaffold0592 (1 HSPs)
scaffold0592 (1-65)||(999-1063)
[»] scaffold0432 (1 HSPs)
scaffold0432 (44-96)||(6540-6592)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-65)||(17127-17191)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-65)||(15107-15170)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-65)||(204365-204429)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-65)||(18684-18748)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-65)||(249060-249124)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-37)||(395950-395986)


Alignment Details
Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 36081904 - 36081999
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | |||||||| ||| ||||||||||||    
T  36081904 tctctctctattgtttttgaccaatgagagaagagaataataaggttgtcccaaaagttgtttaaaaagggttgtacaagtatcattactcttttt 36081999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 53763793 - 53763699
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    ||||||||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||    
T  53763793 tttttctctctctatttattttgaccaatgagaaaaaagaataataaggttgtcccaaaagttgtttaaaaagggttgtacaaatatcattactc 53763699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41170861 - 41170955
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    ||||||||||||||||||||||||||||||| |  | | ||||  |||||||||||||||||||| |||||||| ||||||| |||| |||||||    
T  41170861 tttttctctctctattgtttttgaccaatgaaatgaaagaatagcaaggttgtcccaaaagttgtctaaaaatggttgtacatatatcattactc 41170955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 46355273 - 46355209
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||| |||||||||||||||||| ||||  || |||||||||||||||||    
T  46355273 tttttctctctctattgttattgaccaatgagaaaagagaataccaaagttgtcccaaaagttgt 46355209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 18874906 - 18874809
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||||||||| ||||||||||||||||||||| ||| || ||  ||||||||  ||||||||||   |||||||||| ||||||| ||| ||||||    
T  18874906 tttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctcttt 18874809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9096026 - 9096125
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    |||||| ||||| |||||||||||||||| | |||| | || || |||||||| ||||||||||| | ||||| ||||| ||||||| ||||||||||||    
T  9096026 tttttccctctccattgtttttgaccaataaaaaaa-agaacaacaaggttgtaccaaaagttgtatcaaaataattgttcaaatatcattactcttttt 9096124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 46799845 - 46799940
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||| |||||||| |||||||||||| ||| || || ||||||||||||||| ||||   ||||||||||| ||||||| ||| |||||    
T  46799845 tttttctctctccattgtttt-gaccaatgagaatagagaacaacaaggttgtcccaaaaattgtaccaaaatgattgttcaaatatcattgctctt 46799940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 50291371 - 50291435
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| |||  | || ||||||||||||||||||||    
T  50291371 tttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgt 50291435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53781819 - 53781755
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  |||| ||||||||||||||||||||    
T  53781819 tttttctctctccattgtttttgaccaatgaaaagagagcataacaaggttgtcccaaaagttgt 53781755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24310503 - 24310405
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||||| |||||||||||| ||| | ||||||  | || ||||||||||||||||||||   ||||  ||||| ||||||| |||||||||||    
T  24310503 tttttctctctccattgtttttgactaataaaaaaagagcacaacaaggttgtcccaaaagttgtagcaaaaaaattgttcaaatatcattactctttt 24310405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 52636331 - 52636425
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga-taataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattact 94  Q
    ||||||||||| ||||||||||||||||||| || |||  || || ||||||||| ||||| |||||   |||||||||| ||||||||||||||    
T  52636331 tttttctctctatattgtttttgaccaatgacaagagagaaaaaacaaggttgtcacaaaatttgttatcaaatgattgttcaaatattattact 52636425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29577418 - 29577354
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || ||| || || ||||||||||||||| ||||    
T  29577418 tttttctctctccattgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaaattgt 29577354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 46791973 - 46791909
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||||||||||| ||||||| | ||| || ||| |||||||| ||||||||||    
T  46791973 tttttctctctctattgtttttgatcaatgagtagagagaacaatgaggttgtctcaaaagttgt 46791909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 32574367 - 32574462
Alignment:
Q  2 ttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||||||||| |||||||||||||| ||||||||  || ||||||  ||||||| |  |||||  ||||| ||||||  |||||||||    
T  32574367 ttttctctctctattgttattgaccaatgagaagagataataccaaagttgtcttaaaagttatacaaaaaaaattgttcaaataacattactctt 32574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4896482 - 4896416
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgttt 67  Q
    |||||||||||| |||||||||||||||||| || ||| || ||  |||||||| ||||||||||||    
T  4896482 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgttt 4896416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9827967 - 9827889
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgt 79  Q
    |||||||||||| ||||||||||||||||||||| |||||| || || |||||| |||| ||| |   |||||||||||    
T  9827967 tttttctctctccattgtttttgaccaatgagaagagataacaacaaagttgtctcaaaggttataccaaaatgattgt 9827889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21766636 - 21766698
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    |||||||||||||||||||||| |||||| |||| |||  | || ||||||||||||||||||    
T  21766636 tttttctctctctattgtttttaaccaataagaagagaacacaacaaggttgtcccaaaagtt 21766698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25936329 - 25936391
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    |||||||||||| |||||||||||||||| |||||||| || || ||| ||||| ||||||||    
T  25936329 tttttctctctccattgtttttgaccaataagaaaagagaaaaacaagattgtcacaaaagtt 25936391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 43864122 - 43864216
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    ||||||||||||||||| ||||||||||||| |  | | ||||  ||||||||| ||| |||||| |||||| | ||||||| |||| |||||||    
T  43864122 tttttctctctctattgattttgaccaatgaaatgaaaaaatagcaaggttgtctcaatagttgtctaaaaagggttgtacatatatcattactc 43864216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43982986 - 43983072
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||||||| ||||||||||||||||||||| ||| || ||  || |||||| |||||||||   |||||| |||| |||||||    
T  43982986 tttttctctctccattgtttttgaccaatgagaagagagaacaactagattgtcctaaaagttgtaccaaaatggttgttcaaatat 43983072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 45678352 - 45678446
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    |||||||||||| |||||||||||||||| | || ||| || || |||||||| |||||||||||   |||||  |||| ||||||| |||||||    
T  45678352 tttttctctctccattgtttttgaccaataaaaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 45678446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 12297239 - 12297276
Alignment:
Q  57 aaaagttgtttaaaaatgattgtacaaatattattact 94  Q
    |||| |||||||||||||||||||||||||||||||||    
T  12297239 aaaatttgtttaaaaatgattgtacaaatattattact 12297276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3475957 - 3476021
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||| |||||||||||||||||||||||||| || | | || |||||||||||| |||| |||||    
T  3475957 ttttactctctctattgtttttgaccaatgaaaagaaagaaaaataaggttgtcacaaatgttgt 3476021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4878056 - 4878120
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||| || |||||||||||||||||| || |||  | || ||||||||||||||||||||    
T  4878056 tttttctctttccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgt 4878120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5208309 - 5208245
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  5208309 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 5208245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6126942 - 6127006
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||| ||||||||| |||||||| || |   |||||||| ||||||||||    
T  6126942 tttttctctctctattgttcttgaccaataagaaaagagaaaaggtaggttgtcacaaaagttgt 6127006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7037466 - 7037402
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| ||||  || || || ||||||||||| ||||||||    
T  7037466 tttttctctctccattgtttttgaccaataagaagggagaaaaacaaggttgtccctaaagttgt 7037402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9032869 - 9032933
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| | |||||| || || ||||||||| | ||||||||    
T  9032869 tttttctctctccattgtttttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgt 9032933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 11493159 - 11493123
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataa 41  Q
    ||||||||||||||||||||||||||| |||||||||    
T  11493159 tctctctctattgtttttgaccaatgaaaaaagataa 11493123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 18634790 - 18634890
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    |||||||  ||| ||||||||| | |||| |||| ||| || ||||||||||||  |||| |||||| |||||| ||||| |||||| ||||||| ||||    
T  18634790 tttttcttcctcgattgttttttatcaataagaagagagaaaaataaggttgtcttaaaaattgtttcaaaatggttgtataaatatcattactcatttt 18634889  T
Q  101 c 101  Q
    |    
T  18634890 c 18634890  T

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Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 18944382 - 18944438
Alignment:
Q  9 tctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||| |||||||||||||| |||| |||  | |||||||||||||||||||||||    
T  18944382 tctctaatgtttttgaccaataagaagagaacacaataaggttgtcccaaaagttgt 18944438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19807400 - 19807336
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||||||||||| |||| |||| | || | || ||||||||||||||| ||||    
T  19807400 tttttctctctctattgtttttgatcaataagaagatatcacaacaaggttgtcccaaaaattgt 19807336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 27001391 - 27001327
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  27001391 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 27001327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 32079202 - 32079294
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||| ||||||||||| |||| |||||||| || || ||||||||| | |||||||||   |||||  ||||||||||| | |||||||    
T  32079202 tctctctccattgtttttgatcaataagaaaagagaaaaacaaggttgtcactaaagttgttatgaaatgtatgtacaaatatcactactctt 32079294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37775409 - 37775345
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||| ||||||||||| || ||||||||||| || ||| ||||| ||||||||| ||||||||||    
T  37775409 ttttactctctctattattattgaccaatgataatagagaataacaaggttgtctcaaaagttgt 37775345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43358702 - 43358797
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    ||||||||||||||||| ||||||||||| | || ||| || || || ||||||  |||| ||||||||||| || ||||||||||| | |||||||    
T  43358702 tttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagttgtcataaaaattgtttaaaaaaga-tgtacaaatatcactactctt 43358797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44368184 - 44368120
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||| ||| |||| ||| || |||||||||||| | ||||||||    
T  44368184 tttttctctctccattgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgt 44368120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47106000 - 47106064
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  47106000 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 47106064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 51377275 - 51377211
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  51377275 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 51377211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 32294730 - 32294675
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaa 60  Q
    ||||||||||||||||||||| ||| ||||||||  | || |||||||||||||||    
T  32294730 tctctctctattgtttttgacgaataagaaaagaacacaacaaggttgtcccaaaa 32294675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 36110225 - 36110320
Alignment:
Q  3 tttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||||||||||| |||||||||||| |||| |||  | || ||||||||||||||| |||| | ||||   |||| ||||||| | ||||||||    
T  36110225 tttctctctctattatttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtatcaaaagagttgttcaaatatcactactcttt 36110320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 48650238 - 48650179
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaa 60  Q
    |||||||||||| |||||||||||||||| |||| ||| || || |||||||| ||||||    
T  48650238 tttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaa 48650179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 54801469 - 54801410
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaa 60  Q
    |||||||||||||||| || |||||||||||||| ||| ||||| || |||||| |||||    
T  54801469 tttttctctctctattattattgaccaatgagaagagagaataacaaagttgtctcaaaa 54801410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 1728069 - 1728007
Alignment:
Q  3 tttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||| |||| | |  | || ||||||||||||||| ||||    
T  1728069 tttctctctctattgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgt 1728007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1987695 - 1987617
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgt 79  Q
    |||||||||||| |||||||||||||||||| || ||| || || || |||||| |||| |||||   |||||||||||    
T  1987695 tttttctctctccattgtttttgaccaatgaaaagagagaacaacaaagttgtctcaaaggttgtaccaaaatgattgt 1987617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3223078 - 3223140
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||    
T  3223078 tttttctctctccattgtttttgaccaataagaagagagaaaaagaaggttgtcactaaagtt 3223140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15596485 - 15596555
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaa 71  Q
    |||||||||||| |||||||| ||||||||| ||| || || ||  | |||||| ||||||||||||||||    
T  15596485 tttttctctctccattgttttggaccaatgaaaaatgagaaaaaagaagttgtcacaaaagttgtttaaaa 15596555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 25840655 - 25840613
Alignment:
Q  46 aaggttgtcccaaaagttgtttaaaaatgattgtacaaatatt 88  Q
    |||||||||  |||||||||||||||||| |||||||||||||    
T  25840655 aaggttgtcataaaagttgtttaaaaatggttgtacaaatatt 25840613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 38844472 - 38844442
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  38844472 tttttctctctctattgtttttgaccaatga 38844442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 46309105 - 46309075
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  46309105 tttttctctctctattgtttttgaccaatga 46309075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6686135 - 6686168
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  6686135 tttttctctctctattgtttttgaccaataagaa 6686168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8455992 - 8456045
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    ||||||||||||||||||||||||||||| | || ||| || || |||||||||    
T  8455992 tttttctctctctattgtttttgaccaataaaaagagagaaaaagaaggttgtc 8456045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10096724 - 10096691
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  10096724 tttttctctctctattgttttggaccaatgagaa 10096691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 20760301 - 20760252
Alignment:
Q  49 gttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||| ||||||    
T  20760301 gttgtcacaaaagttgttaaaaaataattgtacaaatatcatttctcttt 20760252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 20766692 - 20766643
Alignment:
Q  49 gttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||| ||||||    
T  20766692 gttgtcacaaaagttgttaaaaaataattgtacaaatatcatttctcttt 20766643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33914320 - 33914239
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtaca 82  Q
    ||||| |||||||||||||||| |||||||| |  | | ||||  ||||||||||||| |||||| |||||| | |||||||    
T  33914320 tttttatctctctattgtttttaaccaatgaaatgaaagaatagcaaggttgtcccaatagttgtctaaaaagggttgtaca 33914239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34027985 - 34028018
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    |||||||||||| |||||||||||||||||||||    
T  34027985 tttttctctctccattgtttttgaccaatgagaa 34028018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38952778 - 38952815
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga 38  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  38952778 tttttctctctccattgtttttgaccaatgaaaaaaga 38952815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 42854030 - 42854063
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    |||||||||||||||||||||||||| |||||||    
T  42854030 tttttctctctctattgtttttgaccgatgagaa 42854063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4949216 - 4949152
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||| |||||||||||| ||||||||||| | | || || || |||||| ||||||||||    
T  4949216 tttttctctttctattgtttttaaccaatgagaagaaagaacaacaaagttgtctcaaaagttgt 4949152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8026746 - 8026682
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || || |||||| | ||||||||    
T  8026746 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 8026682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 8614275 - 8614335
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||| |||| | |  | || ||||||||||||||| ||||    
T  8614275 tctctctctattgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgt 8614335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 12297393 - 12297425
Alignment:
Q  62 ttgtttaaaaatgattgtacaaatattattact 94  Q
    |||| ||||||||||||||||||||||||||||    
T  12297393 ttgtctaaaaatgattgtacaaatattattact 12297425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15638219 - 15638283
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||| ||||| |||| ||| || || ||||||||| | ||||||||    
T  15638219 tttttctctctccattgtttttgtccaataagaagagagaaaaacaaggttgtcaccaaagttgt 15638283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 33438134 - 33438162
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  33438134 tttttctctctctattgtttttgaccaat 33438162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33484088 - 33484024
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||||| |||| |||| ||| || | |||||||||| | ||||||||    
T  33484088 tttttctctctccattgtttttgatcaataagaagagagaaaagtaaggttgtcaccaaagttgt 33484024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 34259918 - 34260010
Alignment:
Q  5 tctctctct-attgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||| || ||||||||||||| |||| ||| || || ||| ||||| ||||||||||    ||||| |||||||||||| ||||||||    
T  34259918 tctctctctcatagtttttgaccaataagaagagagaaaaagaagtttgtcacaaaagttgtcaccaaatggttgtacaaatatcattactct 34260010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 36488445 - 36488366
Alignment:
Q  7 tctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||| ||||||||| |||||| | |||||| || ||| |||||||||||||| ||||  |||||| ||||| |||||||    
T  36488445 tctctccattgtttttaaccaataa-aaaagagaacaatgaggttgtcccaaaaattgtacaaaaataattgttcaaatat 36488366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 39699449 - 39699385
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||| ||||||||||  ||||||||||| |||| |||  | ||||||||||| |||||||||||    
T  39699449 tttttttctctctattaattttgaccaataagaagagaacacaataaggttgttccaaaagttgt 39699385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 48791575 - 48791487
Alignment:
Q  9 tctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    ||||| ||||||||||||||| | || | |||| || ||||||||||||| ||||||    ||||| |||| ||||||| |||||||||    
T  48791575 tctctcttgtttttgaccaataacaagaaataacaacaaggttgtcccaagagttgtcatgaaatggttgttcaaatatcattactctt 48791487  T

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Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 45633669 - 45633596
Alignment:
Q  195 gttccaatttccagccaaccatgtagccgccttcactccaaacgacaccacactcgcaccgtatcctgctctct 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  45633669 gttccaatttccagccaaccatgtagccgccttcactccaaacgacaccacactcgcgccgtatcatgctctct 45633596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 1834595 - 1834690
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||||||||||||||||||||||||| | |||| ||||||||| |||||||||||||| |||||||| | |||||||||||| ||||||||    
T  1834595 tttttctctctctattgtttttgaccaatgaaagaagagaataataagattgtcccaaaagttatttaaaaagggttgtacaaatatcattactct 1834690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 49886752 - 49886838
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||||||||||||||||| |||||| | |||||| |||||||||||||||| |||||||||||||||||  ||||||||||||    
T  49886752 tttttctctctctattgtttttaaccaataaaaaaagagaataataaggttgtcctaaaagttgtttaaaaatagttgtacaaatat 49886838  T

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Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 47683879 - 47683974
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||||||||||| |||||||||||||| |||| ||| ||  | ||||||||| ||||||||||   |||||| |||||||||||| ||||||||    
T  47683879 tttttctctctctaatgtttttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtacaaatatcattactct 47683974  T

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Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 9027702 - 9027799
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||||||||| |||||||||||||||| |||| ||| || || |||||||| |||||||||||   |||||  |||| ||||||| ||||||||||    
T  9027702 tttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactcttt 9027799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21481853 - 21481922
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaa 70  Q
    ||||||| |||||||||||||||||||||||||| ||| || ||| |||||||| |||||||||| ||||    
T  21481853 tttttctgtctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtataaa 21481922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 44689892 - 44689989
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    ||||||||||||||||||||||||||||| | || |||  | || |||||||||||||||||||||  ||||  ||||| ||||||| | ||||||||    
T  44689892 tttttctctctctattgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgttccaaaagaattgttcaaatatcactactcttt 44689989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43149325 - 43149231
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    |||||||||||| |||||||||||||||| |||| ||| || || |||||||| |||||||||||   |||||  |||| ||||||| |||||||    
T  43149325 tttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 43149231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2935493 - 2935429
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||| |||||||||||||| | | ||||| ||||||||| ||||||||||    
T  2935493 tttttctctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgt 2935429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25559793 - 25559869
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgatt 77  Q
    |||||||||||||||||||||||| ||||||||| ||| || |||||  ||||| |||| ||||| | |||||||||    
T  25559793 tttttctctctctattgtttttgatcaatgagaagagagaacaataaaattgtctcaaaggttgtatcaaaatgatt 25559869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 27198136 - 27198040
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||| ||||||||| |||||||| || ||| || ||| ||||||||  ||||||||||   |||||||||| ||||||| ||| |||||    
T  27198136 tttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcataaaagttgttagcaaatgattgttcaaatatcattgctctt 27198040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29555823 - 29555759
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||| ||| |||| |||  | || ||||||||||||||||||||    
T  29555823 tttttctctctctattgtttttgactaataagaagagaacacaacaaggttgtcccaaaagttgt 29555759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 48117425 - 48117489
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | || ||||||||||||||||||||    
T  48117425 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgt 48117489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 51385422 - 51385358
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || ||| || || | ||||||||||||||||||    
T  51385422 tttttctctctccattgtttttgaccaatgaaaagagagaacaacatggttgtcccaaaagttgt 51385358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 43460481 - 43460576
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    ||||||||||||||||||||||||| |||| ||| || |  |||| |||||||||||||||   |||| | |||||||||||| | || |||||||    
T  43460481 tctctctctattgtttttgaccaataagaagagagaaaatgaaggctgtcccaaaagttgtcacaaaaaggttgtacaaatatcactattcttttt 43460576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 50025663 - 50025572
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||||||||||||||||||||||||||| ||| || || || |||||| |||| |||||   |||||| ||||  |||||| ||||||||    
T  50025663 tctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgtgaaaatatcattactct 50025572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11327197 - 11327295
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    ||||||||||||||||||||||||||||| |||| ||| |  || ||||||||| | ||||||||    |||||  ||||||||||| ||| |||||||    
T  11327197 tttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatggatgtacaaatatcattgctctttt 11327295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33971972 - 33972066
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    |||||||||||| ||||||||| ||||||||||| ||| || || ||||||||| ||||| ||||   |||||  |||| ||||||| |||||||    
T  33971972 tttttctctctccattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatcattactc 33972066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 45633768 - 45633726
Alignment:
Q  96 tttttcatttaaaaaacaaaatacagatcaaaccttacacacc 138  Q
    ||||||||||||||||||||||||| || ||||||||||||||    
T  45633768 tttttcatttaaaaaacaaaatacatattaaaccttacacacc 45633726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44127174 - 44127109
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    |||||||||||| ||||||||| ||||||||||| ||| || ||| ||||||||  ||||||||||    
T  44127174 tttttctctctccattgtttttaaccaatgagaagagagaaaaatgaggttgtcataaaagttgtt 44127109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9159018 - 9158954
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||  |||||||||||||||||| || |||  | || ||||||||||||||||||||    
T  9159018 tttttctctcttcattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgt 9158954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 13159750 - 13159814
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  13159750 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 13159814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14839027 - 14838963
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| | || |||  | || ||||||||||||||| ||||    
T  14839027 tttttctctctctattgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaaattgt 14838963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16295553 - 16295617
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| | || ||| || || || |||||| ||||||||||    
T  16295553 tttttctctctctattgtttttgaccaataaaaagagagaacaacaaagttgtctcaaaagttgt 16295617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 29533856 - 29533928
Alignment:
Q  7 tctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgt 79  Q
    |||||| ||||||||||||||||||||| ||| || || || |||||| ||||||||||   |||||||||||    
T  29533856 tctctcaattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaagttgtaccaaaatgattgt 29533928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34021445 - 34021381
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| ||| || || || |||||| | ||||||||    
T  34021445 tttttctctctctattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 34021381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35368700 - 35368764
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||||||||| |||||||| || |||  | || ||| ||||||||||||||||    
T  35368700 tttttctctctctattgttttttaccaatgaaaagagagcacaacaagattgtcccaaaagttgt 35368764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 36819045 - 36819109
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  36819045 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 36819109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 49361819 - 49361755
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||| |||||||||||||| | | ||||| || |||||| ||||||||||    
T  49361819 tttttctctctccattgttattgaccaatgagaagaaagaataacaaagttgtcacaaaagttgt 49361755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 54233483 - 54233419
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  54233483 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 54233419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 19150344 - 19150391
Alignment:
Q  49 gttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||| ||||||||||| |||||||||||||||||||| ||| ||||    
T  19150344 gttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctct 19150391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 50745638 - 50745697
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaa 60  Q
    |||||||||||| |||||||||||||||||| || |||  | || |||||||||||||||    
T  50745638 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaa 50745697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 1295421 - 1295451
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  1295421 tttttctctctctattgtttttgaccaatga 1295451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2280266 - 2280324
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaa 59  Q
    |||||||||||| ||||||||||||||||||||| ||| || || || |||||| ||||    
T  2280266 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaa 2280324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7351620 - 7351558
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    |||||||||||||||| |||||||||||| |||| |||  | || |||||| |||||||||||    
T  7351620 tttttctctctctattatttttgaccaataagaagagaacacaacaaggttttcccaaaagtt 7351558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11173539 - 11173636
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    ||||||||||   |||||||||||||||||| || ||| || ||  | |||||| |||||||||| | ||| || |||| |||||||||||||||||||    
T  11173539 tttttctctcaacattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaa-tggttgttcaaatattattactctttt 11173636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11574643 - 11574709
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgttt 67  Q
    ||||||||| || |||||||||||||||| |||| ||| || | |||||||||| | ||||||||||    
T  11574643 tttttctctttcaattgtttttgaccaataagaagagagaaaattaaggttgtcaccaaagttgttt 11574709  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 28300628 - 28300598
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  28300628 tttttctctctctattgtttttgaccaatga 28300598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 31300891 - 31300985
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    |||| |||||||||||||||||||||||| | |||| | || || || |||||||||| | ||||   |||||| |||| ||||||| |||||||    
T  31300891 ttttcctctctctattgtttttgaccaataacaaaaaagaacaacaaagttgtcccaagaattgtcataaaatggttgttcaaatatcattactc 31300985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 32931896 - 32931814
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||| |||||||||||||||| |||| ||| || || ||||||||| | |||||||||   |||||  |||||||||||    
T  32931896 tctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttgtgaaatggatgtacaaatat 32931814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34208356 - 34208434
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgt 79  Q
    |||||||||||||||||||||| | ||||||||| ||| || || || |||||| ||||| |||| | ||||| |||||    
T  34208356 tttttctctctctattgtttttaatcaatgagaagagagaaaaacaaagttgtctcaaaaattgtattaaaataattgt 34208434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 38359339 - 38359381
Alignment:
Q  57 aaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||| |||||||||||||||||||| ||| |||||||    
T  38359339 aaaagttgttaaaaaatgattgtacaaatatcatttctctttt 38359381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7196 - 7143
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||| | |||||| || || |||||||||    
T  7196 tttttctctctccattgtttttgaccaataaaaaaagagaaaaagaaggttgtc 7143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 622441 - 622408
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  622441 tttttctctctctattgttttggaccaatgagaa 622408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20714332 - 20714385
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||| |||| | | || ||||||||||||    
T  20714332 tttttctctctccattgtttttgaccaataagaagatagaaaaataaggttgtc 20714385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 39932232 - 39932269
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga 38  Q
    |||||||||||||||||||||  |||||||||||||||    
T  39932232 tttttctctctctattgttttgaaccaatgagaaaaga 39932269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 39995434 - 39995393
Alignment:
Q  58 aaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||| ||||||||| ||||||||||||| |||||||    
T  39995434 aaagttgtttcaaaatgattatacaaatattatttctctttt 39995393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 43220123 - 43220062
Alignment:
Q  2 ttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    |||||| ||||||||| |||||||||||||||| ||| || || ||  ||||||||||||||    
T  43220123 ttttctatctctattgcttttgaccaatgagaatagagaacaacaaaattgtcccaaaagtt 43220062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 44334783 - 44334750
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  44334783 tttttctctctctattgttttggaccaatgagaa 44334750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44972822 - 44972859
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga 38  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  44972822 tttttctctctctattgttttggaccaataagaaaaga 44972859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 45966702 - 45966735
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  45966702 tttttctctctctattgtttttgaccaataagaa 45966735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 47783684 - 47783761
Alignment:
Q  21 ttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    ||||||||| | || ||| || |||||| ||||||| |||||||||  |||||||||||| |||||| ||| ||||||    
T  47783684 ttgaccaataaaaagagagaagaataagattgtccccaaagttgttacaaaatgattgtataaatataattcctcttt 47783761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49457654 - 49457707
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||||| || ||| || ||| ||||||||    
T  49457654 tttttctctctccattgtttttgaccaatgaaaagagagaaaaatgaggttgtc 49457707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8066444 - 8066507
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || ||| || ||||| |||||| ||| ||||||    
T  8066444 tttttctctctccattgtttttgaccaatgaaaagagagaaaaataa-gttgtcacaatagttgt 8066507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 20380871 - 20380776
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    ||||||| |||| |||||||||||||||||| ||  || || ||  | |||||| |||||||||||| |||||| |||| ||||||| | |||||||    
T  20380871 tttttctttctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagttgttt-aaaatggttgttcaaatatcactactctt 20380776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 20549367 - 20549339
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  20549367 tttttctctctctattgtttttgaccaat 20549339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23906969 - 23906905
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || |  ||||||||| | ||||||||    
T  23906969 tttttctctctccattgtttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgt 23906905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27276823 - 27276919
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||| ||||||||| | |||| | |||||| || || ||||||||| ||||| ||||   |||||  |||| ||||||| |||||||||    
T  27276823 tttttctctctccattgtttttaatcaataaaaaaagaaaacaacaaggttgtctcaaaaattgtaccaaaatagttgttcaaatatcattactctt 27276919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28263634 - 28263698
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| | | || ||||| |||||| | ||||||||    
T  28263634 tttttctctctccattgtttttgaccaataagaagaaagaaaaataaagttgtcactaaagttgt 28263698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29846873 - 29846809
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||| ||||| || || |||  | || ||||||||||||||||||||    
T  29846873 tttttctctctccattgttttttaccaacgaaaagagagcacaacaaggttgtcccaaaagttgt 29846809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30400138 - 30400074
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||| ||||| | ||||||||    
T  30400138 tttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgt 30400074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37215213 - 37215149
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || ||| || ||  | |||||| ||||||||||    
T  37215213 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 37215149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 41448208 - 41448248
Alignment:
Q  56 caaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||||||||||||| |||||||||||| ||| ||||    
T  41448208 caaaagttgtttaaaaatggttgtacaaatatcatttctct 41448248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41877777 - 41877841
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| | |||||| || || || |||||| | ||||||||    
T  41877777 tttttctctctccattgtttttgaccaatcaaaaaagagaaaaacaaagttgtcaccaaagttgt 41877841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44593055 - 44593119
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || ||| || |  |||||||||  |||||||||    
T  44593055 tttttctctctccattgtttttgaccaatgaaaatagagaaaatgaaggttgtcaaaaaagttgt 44593119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 46473217 - 46473312
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||| |||||||||||||||||| || ||| || ||  | ||||||  ||||||||| |  ||||| |||| ||||||| |||||||||    
T  46473217 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgtat-caaatggttgttcaaatatcattactctt 46473312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 48205134 - 48205198
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||  |||||| |||| ||||||||| | | ||||| ||||||||| ||||||||||    
T  48205134 tttttctctctacattgttattgatcaatgagaagaaaaaataacaaggttgtcacaaaagttgt 48205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 48490495 - 48490431
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||| || |||||| |||||||||||||| | | ||||| ||| ||||| ||||||||||    
T  48490495 tttttctctatccattgttattgaccaatgagaagaaaaaataacaagattgtcacaaaagttgt 48490431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 3919395 - 3919481
Alignment:
Q  9 tctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    ||||||||||||||||||||||||| |||| |||||||| |||||||||||| ||||||||||| | |||||||||||| |||||||    
T  3919395 tctctattgtttttgaccaatgagagaagagaataataaagttgtcccaaaaattgtttaaaaagggttgtacaaatatcattactc 3919481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 39815435 - 39815530
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||||||||| |||||||||||||||| |||| |||||||||    |||||||||||||||||||| | |||||||||||| |||||||||||    
T  39815435 tttttctctctctattttttttgaccaatgagagaagagaataataag---atcccaaaagttgtttaaaaagggttgtacaaatatcattactctttt 39815530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37947202 - 37947138
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||    
T  37947202 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgt 37947138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 7420725 - 7420819
Alignment:
Q  3 tttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    ||||||||||||||||| ||||||||| |||||||| || || || ||||||| |||||||||    |||| ||||||||||||| |||||||||    
T  7420725 tttctctctctattgttcttgaccaataagaaaagagaagaaaaaagttgtcctaaaagttgtcacgaaataattgtacaaatatcattactctt 7420819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8577484 - 8577422
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    |||||||||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  8577484 tttttctctctccattgtttttgaccaatgagaatagagaacaacaaggttgtcccaaaagtt 8577422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36794704 - 36794790
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||||||||||||||||||||||| || || ||| ||||| || ||||| |||||| |||||| ||||  |||||||||||||    
T  36794704 tttttctctctctattgtttttgaccaacgaaaagagagaataacaaagttgttccaaaaattgtttcaaaaaaattgtacaaatat 36794790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 835960 - 836024
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||| || |||||||||||||| ||| ||||| ||| ||||||||||||||||    
T  835960 tttttctctctctattattattgaccaatgagaagagaaaataacaagattgtcccaaaagttgt 836024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 46903559 - 46903658
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    |||||||||||||||||||||||||||||||||| ||| || || || |||||| |||| |||||   |||||| ||||  |||||| | ||||||||||    
T  46903559 tttttctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttttt 46903658  T

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Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 96
Target Start/End: Complemental strand, 29094724 - 29094635
Alignment:
Q  7 tctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||||| ||||||||||| |||| |||  | ||||||||||||||||||||||| | ||||   |||| ||||||| ||||||||    
T  29094724 tctctctattgattttgaccaataagaagagaacacaataaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcattactct 29094635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31244717 - 31244620
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||||||||| ||||||||||||||||||||| ||| || || | |||||||||||| |||||   |||||  |||| ||||||| ||| ||||||    
T  31244717 tttttctctctccattgtttttgaccaatgagaagagagaacaacatggttgtcccaaatgttgtaccaaaatagttgttcaaatatcattgctcttt 31244620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 578893 - 578957
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| | || ||||||||| || ||| | |||||||||||    
T  578893 tttttctctctctattgtttttgaccaataaaaagagataataaaaaagttattccaaaagttgt 578957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27787578 - 27787642
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||| |||||||| ||| || || || |||||| ||||||||||    
T  27787578 tttttctctctctattgtttttgacaaatgagaagagagaacaacaaagttgtctcaaaagttgt 27787642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30414953 - 30415017
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| |||  | || ||| ||||||||||||||||    
T  30414953 tttttctctctctattgtttttgaccaataagaagagaacacaacaagattgtcccaaaagttgt 30415017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 48962075 - 48962139
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| |||  | || ||||||||||||||| ||||    
T  48962075 tttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgt 48962139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21255767 - 21255672
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||||||||| ||||||||||||||||||||| ||| || ||  ||||||||  ||||||||||   ||||| |||| ||||||| ||| ||||    
T  21255767 tttttctctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatcattgctct 21255672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 22331438 - 22331540
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    ||||||||||||||||  ||| ||| ||||| || ||| ||||  ||||||| ||||||| |||| | |||| | |||||||||||| ||||||| ||||    
T  22331438 tttttctctctctattactttagacaaatgaaaagagagaatagcaaggttgacccaaaaattgtctcaaaagggttgtacaaatatcattactcatttt 22331537  T
Q  101 cat 103  Q
    |||    
T  22331538 cat 22331540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13813647 - 13813712
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | |||||||||    
T  13813647 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtt 13813712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32966356 - 32966421
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    |||||||||||| |||||||||||||||| | || ||| || ||| |||||||| |||||||||||    
T  32966356 tttttctctctccattgtttttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgtt 32966421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 644789 - 644849
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||| |||||||| ||| || ||||| |||||| |||| |||||    
T  644789 tctctctctattgtttttgactaatgagaagagagaacaataaagttgtctcaaatgttgt 644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1100306 - 1100370
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||| |||||| |||||| |||||||||||||| | | ||||| ||||||||| ||||||||||    
T  1100306 tttttttctctcaattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgt 1100370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 5574254 - 5574198
Alignment:
Q  4 ttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaa 60  Q
    |||||||||||||||||||||||||| | ||||||  | ||||| ||||||||||||    
T  5574254 ttctctctctattgtttttgaccaataaaaaaagaacacaataaagttgtcccaaaa 5574198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23399971 - 23399907
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||| ||||||||||||||||||| |||| |||  | || ||||||||||||||| ||||    
T  23399971 tttttctctttctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgt 23399907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41564862 - 41564798
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||| ||||||||||||||||| |||| |||  | || ||||||||||||||| ||||    
T  41564862 tttttctctctgtattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgt 41564798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41885810 - 41885874
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || |||||||||  |||||||||    
T  41885810 tttttctctctccattgtttttgaccaatcagaatagagaaaaagaaggttgtcaaaaaagttgt 41885874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 50035520 - 50035456
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||| |||||||||||| | |||||| || ||||| |||||| | ||||||||    
T  50035520 tttttctctctctattctttttgaccaataacaaaagagaaaaataaagttgtcactaaagttgt 50035456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 50796091 - 50796154
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||| || ||||||||||| |||||| ||||  |||||||||||||| |||||    
T  50796091 tttttctctctctattattattgaccaatga-aaaagagaatatcaaggttgtcccaaatgttgt 50796154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 7423115 - 7423197
Alignment:
Q  13 tattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||||||||||| |||||||| || |  ||||||||| ||||||||| ||||||||  ||||| |||||| | ||||||    
T  7423115 tattgtttttgaccaataagaaaagagaaaaggaaggttgtcacaaaagttg-ttaaaaatagttgtataaatatcactactct 7423197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37741934 - 37741839
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||| ||||||||||||||| ||||||||||| ||| || || || |||||| ||||| |||| | |||||| ||||  |||||| | ||||||    
T  37741934 tttttccctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaaattgtatcaaaatggttgtcaaaatatcactactct 37741839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 40240093 - 40239998
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||| || |||||||||||||||||| || | |  | || ||||||||||||||||||||   ||||   |||| ||||||||||||||||    
T  40240093 tttttctctatccattgtttttgaccaatgaaaagatagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatattattactct 40239998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 43640969 - 43640870
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    |||||||||||| |||||||||||||||||| || ||| || ||| ||||||||   |||||||||   ||||| |||| ||||||| ||| ||| ||||    
T  43640969 tttttctctctccattgtttttgaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctcatttt 43640870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44161768 - 44161673
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||||||||||||||||||||||| | || ||| ||||| ||| |||| || ||| || | | |||| | |||||||||||| ||| ||||    
T  44161768 tttttctctctctattgtttttgaccaattaaaatagagaataacaagattgtgccgaaaattatcttaaaagggttgtacaaatatcattgctct 44161673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 49615250 - 49615199
Alignment:
Q  8 ctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaa 59  Q
    ||||||||| ||||||||||||||||||||| || ||||| |||||| ||||    
T  49615250 ctctctattatttttgaccaatgagaaaagagaacaataaagttgtctcaaa 49615199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4618733 - 4618795
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    ||||| |||||| ||| |||||||||||||| |||||| || || |||||| |||||||||||    
T  4618733 tttttttctctccattatttttgaccaatgaaaaaagagaacaacaaggttatcccaaaagtt 4618795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6396416 - 6396494
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgt 79  Q
    ||||||||| |||||||||||| ||||||||||| ||| || || || |||||| |||| |||||   |||||||||||    
T  6396416 tttttctctttctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaatgttgtaccaaaatgattgt 6396494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43105194 - 43105280
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||||||| ||| |||||||||||| | || ||| || ||||| |||||||||||| ||||   ||||| ||||| |||||||    
T  43105194 tttttctctctccattatttttgaccaataaaaagagagaacaataaagttgtcccaaaaattgtaccaaaataattgttcaaatat 43105280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 47059872 - 47059786
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||||||| |||||||||||||||||| || ||| || |||||| |||||   |||||||||   ||||| |||| |||||||    
T  47059872 tttttctctctccattgtttttgaccaatgaaaagagagaaaaataagattgtcatgaaagttgttagcaaatggttgttcaaatat 47059786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Complemental strand, 49931599 - 49931561
Alignment:
Q  49 gttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  49931599 gttgtcacaaaagttgttaaaaaatgattgtacaaatat 49931561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2827692 - 2827659
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  2827692 tttttctctctctattgtttttgaccaataagaa 2827659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4511759 - 4511726
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  4511759 tttttctctctctattgttttggaccaatgagaa 4511726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4604618 - 4604671
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||||| || ||| || || |||||||||    
T  4604618 tttttctctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtc 4604671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11068514 - 11068547
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  11068514 tttttctctctctattgttttagaccaatgagaa 11068547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11097866 - 11097829
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga 38  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  11097866 tttttctctctccattgtttttgaccaattagaaaaga 11097829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 17167938 - 17168035
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||||||||||||||||||| |||||||| || ||| || |   |||||||  ||||||||||  | | | |||||| ||||||| ||||||||||    
T  17167938 tttttctctctctattgttttttaccaatgaaaagagagaagatgtaggttgttacaaaagttgtcaatagaagattgttcaaatatcattactcttt 17168035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25995549 - 25995602
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||| | || ||| || ||||||||||||    
T  25995549 tttttctctctccattgtttttgaccaataaaaagagagaaaaataaggttgtc 25995602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26501384 - 26501437
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||| |||| ||| || || |||||||||    
T  26501384 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtc 26501437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32939268 - 32939235
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  32939268 tttttctctctctattgtttttgaccaataagaa 32939235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33422201 - 33422168
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  33422201 tttttctctctctattgttttggaccaatgagaa 33422168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42843326 - 42843273
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||| |||| ||| || || |||||||||    
T  42843326 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtc 42843273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44112543 - 44112576
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  44112543 tttttctctctctattgttttggaccaatgagaa 44112576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 48325311 - 48325344
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    |||||||||||| |||||||||||||||||||||    
T  48325311 tttttctctctccattgtttttgaccaatgagaa 48325344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50528039 - 50527986
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||||| || ||| || || |||||||||    
T  50528039 tttttctctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtc 50527986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51436413 - 51436352
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagt 62  Q
    |||||| ||||||||||||||| ||||||||||| ||| || || || |||||| |||||||    
T  51436413 tttttccctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaagt 51436352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 52369093 - 52369060
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  52369093 tttttctctctctattgttttggaccaatgagaa 52369060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6829767 - 6829703
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||| |||||||||||| |||| ||| || || ||| ||||| | ||||||||    
T  6829767 tttttctctctctattatttttgaccaataagaagagagaaaaacaagattgtcactaaagttgt 6829703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 7203826 - 7203798
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  7203826 tttttctctctctattgtttttgaccaat 7203798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 15182565 - 15182537
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  15182565 tttttctctctctattgtttttgaccaat 15182537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27578271 - 27578323
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgt 53  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||    
T  27578271 tttttctctctccattgtttttgaccaataagaatagagaaaaacaaggttgt 27578323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27954317 - 27954381
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||| | |||||||||||||||||||||| ||| || || || ||||| |||||| ||||    
T  27954317 tttttctctttatattgtttttgaccaatgagaagagagaacaacaaagttgttccaaaaattgt 27954381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28457329 - 28457265
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||  |||||||||||||||||| || ||| || ||||| |||||| |||| |||||    
T  28457329 tttttctctcttcattgtttttgaccaatgaaaatagagaacaataaagttgtctcaaaggttgt 28457265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29489341 - 29489277
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| | | || || ||||||||| | ||||||||    
T  29489341 tttttctctctccattgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgt 29489277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 30536037 - 30535989
Alignment:
Q  49 gttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||| ||||| ||||| |||||||||||||||||||| ||| |||||    
T  30536037 gttgtcacaaaaattgttaaaaaatgattgtacaaatatcatttctctt 30535989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31290190 - 31290126
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||| |||||||| |||||| || ||  | |||||| ||||||||||    
T  31290190 tttttctctctccattgtttttaaccaatgaaaaaagagaaaaaataagttgtcacaaaagttgt 31290126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36669352 - 36669288
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||| |||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  36669352 tttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 36669288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39010903 - 39010967
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || ||| || ||  | |||||| ||||||||||    
T  39010903 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgt 39010967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 40612203 - 40612231
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  40612203 tttttctctctctattgtttttgaccaat 40612231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42829290 - 42829195
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||||||||||||| |||||| |||| ||| || |  | ||||||| | ||| ||| ||| ||||| |||||||||||| | |||||||    
T  42829290 tttttctctctctattgttttttaccaataagaagagagaaaagaagggttgtcaccaaaattg-ttataaatggttgtacaaatatcactactctt 42829195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 44672063 - 44672103
Alignment:
Q  57 aaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||| |||||||||||||||||||| ||| |||||    
T  44672063 aaaagttgttaaaaaatgattgtacaaatatcatttctctt 44672103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 50460694 - 50460666
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  50460694 tttttctctctctattgtttttgaccaat 50460666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 7295560 - 7295651
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||||| ||||||||||| | ||||   |||||||||||| ||||||||    
T  7295560 tctctctctattgtttttgaccaatgagaagagagaataacaaggttgttccaaaagttgtctcaaaaaagttgtacaaatatcattactct 7295651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23034295 - 23034231
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| ||||||||  | || ||||||||||||||||||||    
T  23034295 tttttctctctctattgtttttgaccaataagaaaagagcacaacaaggttgtcccaaaagttgt 23034231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44185265 - 44185329
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||||||||||||||||||||| ||| || ||| |||||||| ||||||||||    
T  44185265 tttttctctctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgt 44185329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29923760 - 29923823
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| ||||||||  | || |||||||| |||||||||||    
T  29923760 tttttctctctctattgtttttgaccaataagaaaagaacacaacaaggttgt-ccaaaagttgt 29923823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30864399 - 30864335
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||||||| || || ||||||||| | ||||||||    
T  30864399 tttttctctctccattgtttttgaccaataagaaaagagaaaaacaaggttgtcactaaagttgt 30864335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 37385215 - 37385151
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||||||| || || ||||||||| | ||||||||    
T  37385215 tttttctctctcaattgtttttgaccaataagaaaagagaagaacaaggttgtcaccaaagttgt 37385151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37970022 - 37970086
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||||||||||||||||||||| ||| || || || |||||| |||| |||||    
T  37970022 tttttctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaatgttgt 37970086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41910167 - 41910103
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| |||  | || |||||||||| |||||||||    
T  41910167 tttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgt 41910103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 47945074 - 47945169
Alignment:
Q  3 tttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||||||||||| |||||||||||| |||| |||  | || |||||||||||||||||||| | ||||   |||| ||||||| | ||||||||    
T  47945074 tttctctctctattatttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactcttt 47945169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 47950504 - 47950599
Alignment:
Q  3 tttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||||||||||| |||||||||||| |||| |||  | || |||||||||||||||||||| | ||||   |||| ||||||| | ||||||||    
T  47950504 tttctctctctattatttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgtatcaaaagagttgttcaaatatcactactcttt 47950599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 40693510 - 40693412
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||||||||||||||||||||||||||| ||| || ||  ||||||||  | ||||||||   | ||| |||| ||||||| ||| |||||||    
T  40693510 tttttctctctctattgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttgttcaaatatcattgctctttt 40693412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 41538569 - 41538655
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    ||||||||| ||||||||||||||||||| |||| | |  | || |||||||||||||||||||| | ||||  ||||| |||||||    
T  41538569 tttttctctttctattgtttttgaccaataagaagataacacaacaaggttgtcccaaaagttgtatcaaaagaattgttcaaatat 41538655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2600516 - 2600452
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||||||||||||||| ||| || || || |||||| |||| |||||    
T  2600516 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgt 2600452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22331193 - 22331129
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||| |||||||| || |||  |||| ||||||||||||||| ||||    
T  22331193 tttttctctctccattgttttttaccaatgaaaagagagcataacaaggttgtcccaaaaattgt 22331129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24380703 - 24380639
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||| ||||||||||||||||| |||| |||  | || |||||||| |||||||||||    
T  24380703 tttttctctctttattgtttttgaccaataagaagagaacacaacaaggttgttccaaaagttgt 24380639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25272680 - 25272744
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||| ||||||||| |||| | | ||||| ||||||||| ||||||||||    
T  25272680 tttttctctctccattgttattgaccaataagaagaaagaataacaaggttgtcacaaaagttgt 25272744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27704524 - 27704588
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||| |||||||||||||||||| |||| |||  | || || |||||||||||||||||    
T  27704524 tttttctctcgctattgtttttgaccaataagaagagaacacaacaaagttgtcccaaaagttgt 27704588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27866519 - 27866459
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaag 61  Q
    ||||| ||||| | ||||||||| |||||||||| ||| || |||||||||||||||||||    
T  27866519 tttttatctctttgttgtttttggccaatgagaagagagaacaataaggttgtcccaaaag 27866459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 32315919 - 32315979
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||| |||| ||| || || || |||||| ||||||||||    
T  32315919 tctctctctattgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgt 32315979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33050272 - 33050336
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| ||| |  || ||||||||| | ||||||||    
T  33050272 tttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgt 33050336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 39533367 - 39533308
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaag 61  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||| || |||||| ||||||    
T  39533367 tttttctatctctattgtttttgaccaatga-aaaagagaataacaatgttgtctcaaaag 39533308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 42431812 - 42431876
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  42431812 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 42431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 44187780 - 44187876
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||| |||||||||||||||||| |||| | || ||||| ||||||   |||||||||   ||||  |||| ||||||||||| |||||    
T  44187780 tttttctctctccattgtttttgaccaatgaaaaaaaagaacaataaagttgtcatgaaagttgttagtaaatagttgttcaaatattattgctctt 44187876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 48639367 - 48639303
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||||||||||||||||  ||| |||  | || |||||||| |||||||||||    
T  48639367 tttttctctctctattgtttttgaccaatacgaagagaacacaacaaggttgttccaaaagttgt 48639303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 49142499 - 49142435
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||| |||||| |||||| |||||||||||||| | | ||||| ||||||||| ||||||||||    
T  49142499 tttttttctctccattgttattgaccaatgagaagaaaaaataacaaggttgtcacaaaagttgt 49142435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41227164 - 41227223
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaa 60  Q
    |||||||||| |||||||||||||||||| |||  ||| || |||||||||||| |||||    
T  41227164 tttttctctcactattgtttttgaccaataagagtagagaaaaataaggttgtcacaaaa 41227223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 47379653 - 47379712
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttg 64  Q
    |||||||||||||||||| ||||||||||| ||| || || || |||||| |||||||||    
T  47379653 tctctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaagttg 47379712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 384646 - 384716
Alignment:
Q  7 tctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgatt 77  Q
    |||||||||| ||||| ||||||||||| ||| ||||| || |||||| |||| ||||| | |||||||||    
T  384646 tctctctattttttttaaccaatgagaagagagaataacaaagttgtctcaaaggttgtatcaaaatgatt 384716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 640481 - 640539
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaa 59  Q
    |||||||||||| ||||||||||||||||||||| ||| || || || |||||| ||||    
T  640481 tttttctctctcaattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaa 640539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 2323382 - 2323412
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  2323382 tttttctctctctattgtttttgaccaatga 2323412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2347041 - 2346955
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||||||| |||| ||||||||||| | || | | || |||||||||||| | ||||||||   ||||||| |||||||||||    
T  2347041 tttttctctctccattgcttttgaccaataacaagaaagaaaaataaggttgtcactaaagttgtcataaaatgaatgtacaaatat 2346955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 11070317 - 11070347
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  11070317 tttttctctctctattgtttttgaccaatga 11070347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 46148255 - 46148341
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||||||| |||||||||||||||||| || ||| |  |||||||||||    ||||||||| | ||||| |||| |||||||    
T  46148255 tttttctctctccattgtttttgaccaatgaaaagagagagaaataaggttgttatgaaagttgttaacaaatggttgttcaaatat 46148341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48866912 - 48866846
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgttt 67  Q
    |||||||||||| |||||||||||| ||||| || ||| || ||  |||||||| ||||||||||||    
T  48866912 tttttctctctccattgtttttgactaatgaaaagagagaaaaaagaggttgtcacaaaagttgttt 48866846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 9363438 - 9363385
Alignment:
Q  44 ataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||| |||||| |||||||||||  ||||||||||||||||||| ||| |||||    
T  9363438 ataaagttgtcacaaaagttgttataaaatgattgtacaaatatcatttctctt 9363385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45335951 - 45336016
Alignment:
Q  1 tttttctctctctattg-tttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||| |||||||||||| | || ||| || || ||||||||||||||| ||||    
T  45335951 tttttctctctctattgttttttgaccaataaaaagagagaacaacaaggttgtcccaaaatttgt 45336016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48086948 - 48086985
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga 38  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  48086948 tttttctctctccattgtttttgaccaataagaaaaga 48086985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 1709373 - 1709401
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  1709373 tttttctctctctattgtttttgaccaat 1709401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8061727 - 8061687
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataa 41  Q
    |||||||||||| |||||||||||||||| |||| ||||||    
T  8061727 tttttctctctccattgtttttgaccaataagaagagataa 8061687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12141973 - 12142037
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||| ||||||||||||||||||||| || | | || || || |||||| ||||||||||    
T  12141973 tttttctctttctattgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgt 12142037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33465019 - 33464955
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||| |||| |||||| || | | ||||| ||||||||| ||||||||||    
T  33465019 tttttctctctccattgttattgatcaatgaaaagaaaaaataacaaggttgtcacaaaagttgt 33464955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37392132 - 37392228
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||| ||||||||| |||||||| || ||| || ||| ||||||||   |||||||||   ||||| |||| ||||||| ||| |||||    
T  37392132 tttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatcattgctctt 37392228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38197750 - 38197814
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || | |  | || ||| ||||||||||||||||    
T  38197750 tttttctctctccattgtttttgaccaatgaaaagatagcacaacaagattgtcccaaaagttgt 38197814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38978581 - 38978645
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||| ||| |||| ||| || || ||||||||| | ||||||||    
T  38978581 tttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcactaaagttgt 38978645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39369391 - 39369455
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||| |||||| |||||||| || || || |||||| | ||||||||    
T  39369391 tttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagttgt 39369455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 48522245 - 48522273
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  48522245 tttttctctctctattgtttttgaccaat 48522273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 34247863 - 34247957
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    ||||||||| ||||||||||||||||||||| || ||| || || |||||||||||||||||||| | |||| | |||||||||||| |||||||    
T  34247863 tttttctctttctattgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaagttgtctcaaaagggttgtacaaatatcattactc 34247957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 1422684 - 1422593
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattatta 92  Q
    |||||||||||| |||||||||||||||||| |||| | ||||| |||||||||||||||||||| | |||||  |||| ||||||| ||||    
T  1422684 tttttctctctccattgtttttgaccaatgaaaaaatagaataacaaggttgtcccaaaagttgtatcaaaatagttgttcaaatatcatta 1422593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9305979 - 9305886
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattact 94  Q
    ||||||||||| |||||||||||| |||||| || ||| ||||  ||||||||| |||||||||| | |||  |||||||||||||| ||||||    
T  9305979 tttttctctctatattgtttttgatcaatgaaaagagagaatatcaaggttgtctcaaaagttgtctcaaatggattgtacaaatatcattact 9305886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32234434 - 32234369
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    ||||||||||| ||||||| |||||||||||||| ||| ||||| |||||||||| ||||||||||    
T  32234434 tttttctctctatattgttattgaccaatgagaagagagaataaaaaggttgtcctaaaagttgtt 32234369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25430735 - 25430799
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| |||  | || ||||||||||||||||||||    
T  25430735 tttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgt 25430799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 8233478 - 8233383
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||||||||| ||||||||||||||||||||| ||| || || |||||| ||| |||||||||  ||||||   ||| ||||||| ||||||||    
T  8233478 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttatccaaaaagttgtacaaaaatagatgttcaaatatcattactct 8233383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18550068 - 18550163
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||||||||||||||||||||| |||| |||| |||  | || ||||||||||||||||||||   |||||  |||| ||||||| ||||||||    
T  18550068 tttttctctctctattgtttttgatcaataagaagagaacacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactct 18550163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41776264 - 41776363
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    |||||||||||| |||||||||||||||||| || |||  | || ||||||||||||||||||||   ||||   |||| ||||||| ||||||||||||    
T  41776264 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactcttttt 41776363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 42651013 - 42651106
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||||||||||||||| ||||||||||| ||| || || ||||||||| ||||||||||   |||||  |||| ||||||| |||| |||||    
T  42651013 tctctctctattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaagttgtaccaaaatagttgttcaaatatcattattcttt 42651106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23709065 - 23709129
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||| ||||||||||| || |||  |||| ||||||||||||||| ||||    
T  23709065 tttttctctctctattgttcttgaccaatgaaaagagagcataacaaggttgtcccaaaaattgt 23709129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27300435 - 27300499
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| |||  | || ||| ||||||||||||||||    
T  27300435 tttttctctctctattgtttttgaccaataagaagagaatacaacaagattgtcccaaaagttgt 27300499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 33511698 - 33511786
Alignment:
Q  9 tctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    ||||||||||||||||||||| |||| ||| || || || ||||||||||||||| |   |||||  |||||||||||| |||||||||    
T  33511698 tctctattgtttttgaccaataagaagagagaagaagaatgttgtcccaaaagttttcacaaaatagttgtacaaatatcattactctt 33511786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34838252 - 34838188
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| |||  | || |||||||||| |||||||||    
T  34838252 tttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcctaaaagttgt 34838188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 35701819 - 35701761
Alignment:
Q  7 tctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||| |||| |||  |||| ||| ||||||||||||||||    
T  35701819 tctctctattgtttttgaccaataagaagagaacataacaagattgtcccaaaagttgt 35701761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 45405814 - 45405720
Alignment:
Q  4 ttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||||| |||||||||||||||||||||| ||| || ||||| |||||| |||| |||||   |||||| ||||  |||||| | ||||||||    
T  45405814 ttctctctttattgtttttgaccaatgagaagagagaacaataaagttgtctcaaaggttgtaccaaaatggttgttaaaatatcactactcttt 45405720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9985660 - 9985623
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga 38  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  9985660 tttttctctctctattgtttttgaccaataagaaaaga 9985623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12045635 - 12045582
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| ||||||||||||||||||||| ||| || || |||||||||    
T  12045635 tttttctctctccattgtttttgaccaatgagaagagacaagaagaaggttgtc 12045582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 20996178 - 20996223
Alignment:
Q  55 ccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    |||||||||||| |||||||||||||||||||| ||| ||||||||    
T  20996178 ccaaaagttgttcaaaaatgattgtacaaatatcatttctcttttt 20996223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2597142 - 2597078
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  2597142 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 2597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4148637 - 4148573
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||| |||| ||||||||||||||||| ||||  ||  | |||||||||||||||||||||||    
T  4148637 tttttccctctttattgtttttgaccaataagaagggaacacaataaggttgtcccaaaagttgt 4148573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5925144 - 5925208
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||| |||||||||||| |||| ||| || ||||||||||||  |||||||||    
T  5925144 tttttctctctccattatttttgaccaataagaatagagaaaaataaggttgtcataaaagttgt 5925208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20995040 - 20994976
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| ||| || |   |||||||| ||||||||||    
T  20995040 tttttctctctctattgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgt 20994976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28713182 - 28713246
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||| ||||||| |||| |||  | || ||||||||||||||| ||||    
T  28713182 tttttctctctctattgttttcgaccaataagaagagaatacaacaaggttgtcccaaaaattgt 28713246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28720529 - 28720593
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||| ||||||| |||| |||  | || ||||||||||||||| ||||    
T  28720529 tttttctctctctattgttttcgaccaataagaagagaatacaacaaggttgtcccaaaaattgt 28720593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28728171 - 28728235
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||| ||||||| |||| |||  | || ||||||||||||||| ||||    
T  28728171 tttttctctctctattgttttcgaccaataagaagagaatacaacaaggttgtcccaaaaattgt 28728235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30927913 - 30927849
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  30927913 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 30927849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37471732 - 37471796
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | || ||| ||||||||||||||||    
T  37471732 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgt 37471796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 102431 - 102344
Alignment:
Q  8 ctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    ||||||||||||||||||| |||||||  ||  | || ||||||| || |||||||||   |||||| |||||||||||| |||||||    
T  102431 ctctctattgtttttgacctatgagaagcgaggaaaagaaggttggcctaaaagttgtaacaaaatggttgtacaaatatcattactc 102344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 3394684 - 3394593
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattatta 92  Q
    |||||||||||| ||| ||||| | ||||||||| ||| || ||||| ||||||||||||||| | | |||||  |||| ||||||| ||||    
T  3394684 tttttctctctccattatttttaatcaatgagaagagagaacaataaagttgtcccaaaagttatatcaaaatacttgttcaaatataatta 3394593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 295635 - 295665
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  295635 tttttctctctctattgtttttgaccaatga 295665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5742639 - 5742581
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaa 59  Q
    |||||||||||| ||||||||||||||||||||| ||| || || || |||||| ||||    
T  5742639 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaa 5742581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6825259 - 6825169
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattatt 91  Q
    |||||||||||| ||||||||| |||||| |||| ||| || |||||||||| | | ||||||||  | ||||   |||||||||||||||    
T  6825259 tttttctctctccattgtttttaaccaataagaagagagaaaaataaggttgacaccaaagttgtcaataaatagatgtacaaatattatt 6825169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22836121 - 22836023
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||||| |||||||||||||||||| || |||  | || |||||| |||||||| ||||   ||||   |||| ||||||| |||||||||||    
T  22836121 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttatcccaaaaattgtagcaaaaaagttgttcaaatatcattactctttt 22836023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 32725764 - 32725734
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  32725764 tttttctctctctattgtttttgaccaatga 32725734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5924899 - 5924952
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| ||| |||||||||||| |||| ||| || ||||||||||||    
T  5924899 tttttctctctccattatttttgaccaataagaagagagaaaaataaggttgtc 5924952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11180397 - 11180430
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  11180397 tttttctctctctattgttttggaccaatgagaa 11180430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14548807 - 14548754
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| ||||||||| ||||||||||| ||| || ||| ||||||||    
T  14548807 tttttctctctccattgttttttaccaatgagaagagagaaaaatgaggttgtc 14548754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 24616438 - 24616515
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtaca 82  Q
    ||||||||||||||||||||||||||| |  | | ||||  ||||||||||||| | |||| |||||| | |||||||    
T  24616438 tctctctctattgtttttgaccaatgaaatgaaagaatagcaaggttgtcccaataattgtctaaaaagggttgtaca 24616515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 29108032 - 29107991
Alignment:
Q  58 aaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    ||||||||| |||||||||||||||||||| ||| |||||||    
T  29108032 aaagttgttaaaaaatgattgtacaaatatcatttctctttt 29107991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 32674214 - 32674117
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    ||||||||| |||||||||||| |||||||||||  ||||| || || |||||| |||| |||||   |||||| ||||  |||||| | ||||||||    
T  32674214 tttttctctttctattgtttttaaccaatgagaagggataacaacaaagttgtctcaaaggttgtactaaaatggttgtcaaaatatcactactcttt 32674117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34765832 - 34765779
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||| | |||||| || | ||||||||||    
T  34765832 tttttctctctccattgtttttgaccaataaaaaaagagaaaagtaaggttgtc 34765779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35633951 - 35633914
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga 38  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  35633951 tttttctctctccattgtttttgaccaatgaaaaaaga 35633914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35967388 - 35967335
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||| | ||| || || ||||||||||||    
T  35967388 tttttctctctccattgtttttgaccaataaaaaatgagaaaaataaggttgtc 35967335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37294683 - 37294716
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  37294683 tttttctctctctattgtttttgaccaataagaa 37294716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39359825 - 39359858
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  39359825 tttttctctctctattgtttttgaccaataagaa 39359858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 41304964 - 41304931
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  41304964 tttttctctctctattgttttggaccaatgagaa 41304931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 43605648 - 43605587
Alignment:
Q  4 ttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||||||||||||| |||| ||| || |   |||||||| ||||||||||    
T  43605648 ttctctctctattgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgt 43605587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44380596 - 44380559
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga 38  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  44380596 tttttctctctctattgtttttgaccaatcaaaaaaga 44380559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 2261521 - 2261481
Alignment:
Q  47 aggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||| |||||||| || ||||||||||||||||||||    
T  2261521 aggttgtcacaaaagttattaaaaaatgattgtacaaatat 2261481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6243123 - 6243187
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | || ||  ||||||||||||||||    
T  6243123 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaaattgtcccaaaagttgt 6243187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9227358 - 9227458
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    ||||||| |||| |||||||||||||||| | || | | || |||||  ||||||||||| || | | ||| | ||||| ||||||| ||||||||||||    
T  9227358 tttttctttctcaattgtttttgaccaataaaaagatagaacaataaaattgtcccaaaaattatatcaaattaattgttcaaatatcattactcttttt 9227457  T
Q  101 c 101  Q
    |    
T  9227458 c 9227458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19723188 - 19723124
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||| ||| |||| ||| || || ||||||||| | ||||||||    
T  19723188 tttttctctctccattgtttttgactaataagaagagagaaaaacaaggttgtcactaaagttgt 19723124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21273692 - 21273628
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||||||||| |||||||| || ||| || |  || |||||| ||||||||||    
T  21273692 tttttctctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtcacaaaagttgt 21273628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22203197 - 22203133
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||| || |||||||||||||||| | || |||  | || ||||||||||||||||||||    
T  22203197 tttttctctttccattgtttttgaccaatcaaaagagagcacaacaaggttgtcccaaaagttgt 22203133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22767219 - 22767283
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || ||| || ||  | |||||| ||||||||||    
T  22767219 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 22767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28156292 - 28156356
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| | ||||||||||||||||||| ||| || || || |||||| |||| |||||    
T  28156292 tttttctctctccaatgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgt 28156356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 28623103 - 28623043
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||| |||||||||||||||| |||||||| || |  ||||||||| | ||||||||    
T  28623103 tctctctccattgtttttgaccaataagaaaagagaaaagcaaggttgtcaccaaagttgt 28623043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 33415693 - 33415665
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  33415693 tttttctctctctattgtttttgaccaat 33415665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 35792115 - 35792067
Alignment:
Q  49 gttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||| |||||||| || |||||||||||||||||||| ||| |||||    
T  35792115 gttgtcacaaaagtttttaaaaaatgattgtacaaatatcatttctctt 35792067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41273604 - 41273656
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgt 53  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||    
T  41273604 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgt 41273656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 43597768 - 43597800
Alignment:
Q  57 aaaagttgtttaaaaatgattgtacaaatatta 89  Q
    |||||||||||||||||||||||| ||||||||    
T  43597768 aaaagttgtttaaaaatgattgtataaatatta 43597800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 48743 - 48840
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    ||||||||||||||||||||||||||||| |||| |||  | || ||||||||||||||| |||| | ||||  ||||| ||||||| ||||||||||    
T  48743 tttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgtatcaaaagaattgttcaaatatcattactcttt 48840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12612999 - 12612906
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattact 94  Q
    ||||| |||||| ||||||||||||||||||||| ||| || || ||||||||||||||||||||   |||||| |||| ||||||| ||||||    
T  12612999 tttttatctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatcattact 12612906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17574206 - 17574107
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    ||||||||| || |||||||||||||| |||||| | | || || ||||||||||||||||||||   |||||  |||| ||||||| ||||||||||||    
T  17574206 tttttctctatccattgtttttgaccagtgagaagaaagaacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactcttttt 17574107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 5043018 - 5043075
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagt 62  Q
    ||||||||| |||||||||||||||||||| ||| || || |||||||||||||||||    
T  5043018 tctctctctgttgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagt 5043075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 35616781 - 35616724
Alignment:
Q  3 tttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaa 60  Q
    ||||||||||||||||||||||||||| |||| ||| || || |||||||||||||||    
T  35616781 tttctctctctattgtttttgaccaataagaagagagaacaacaaggttgtcccaaaa 35616724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2863638 - 2863702
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||| |||||||||||||| || |||||| || ||||||||||||||| ||||    
T  2863638 tttttctctctccattatttttgaccaatgaaaagagataacaacaaggttgtcccaaaaattgt 2863702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5005202 - 5005266
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||||| || ||| || || || |||||| ||||||||||    
T  5005202 tttttctctctctattgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 5005266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31626058 - 31625994
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||| ||||||||||||||||| ||| || ||||| ||||||  |||||||||    
T  31626058 tttttctctctctattttttttgaccaatgagaagagagaacaataaagttgtcttaaaagttgt 31625994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 19127213 - 19127311
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    |||||||||||| |||||||| ||||||||| ||| || || ||  | |||||| |||||||||||| |||||| |||| ||||||| | ||||||||||    
T  19127213 tttttctctctccattgttttggaccaatgaaaaatgagaaaaaagaagttgtcgcaaaagttgttt-aaaatggttgttcaaatatcactactcttttt 19127311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42364518 - 42364613
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||||| ||||||||||||||||||| || | |  | || |||||||||||||||||||||  ||||   |||| ||||||| ||||||||    
T  42364518 tttttctctctatattgtttttgaccaatgaaaagataacacaacaaggttgtcccaaaagttgttggaaaaaagttgttcaaatatcattactct 42364613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 22653734 - 22653788
Alignment:
Q  7 tctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaag 61  Q
    |||||||||| ||||||||||||||||| ||| || |||||| ||||||||||||    
T  22653734 tctctctattatttttgaccaatgagaagagagaacaataagattgtcccaaaag 22653788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28811517 - 28811583
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgttt 67  Q
    |||||||||||| |||||||||||||||||| || ||| || ||  |||||||| ||||||||||||    
T  28811517 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgttt 28811583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 37821117 - 37821059
Alignment:
Q  7 tctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||| |||| |||  | || ||||||||||||||||||||    
T  37821117 tctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgt 37821059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 38919941 - 38919999
Alignment:
Q  7 tctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||| ||||||||||||||||| ||| || || |||||||||| |||||||||    
T  38919941 tctctctattatttttgaccaatgagaagagagaacaacaaggttgtcctaaaagttgt 38919999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 39032584 - 39032522
Alignment:
Q  3 tttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||| |||| |||  | || ||||||||||||||| ||||    
T  39032584 tttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaaattgt 39032522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3518272 - 3518336
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||||||||||||||| ||| || || || |||||| |||| |||||    
T  3518272 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgt 3518336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4173106 - 4173042
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||| |||||||||||||| | | ||||| ||||||||| |||| |||||    
T  4173106 tttttctctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaggttgt 4173042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9594567 - 9594631
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| |  |||||||||||| | ||||||||    
T  9594567 tttttctctctccattgtttttgaccaataagaagagagagaaataaggttgtcactaaagttgt 9594631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9957183 - 9957119
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||| ||||||||| |||| | | ||||||||||||||| ||||| ||||    
T  9957183 tttttctctctccattgttattgaccaattagaagaaagaataataaggttgtcacaaaaattgt 9957119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12401281 - 12401345
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||| |||| |||||||||||||||| |||| ||| || |||||||||||| | ||||||||    
T  12401281 tttttctgtctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgt 12401345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15622133 - 15622197
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  15622133 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 15622197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 20040877 - 20040933
Alignment:
Q  3 tttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaa 59  Q
    |||||||||| ||||||||||||||||||||| ||| || || |||||||| |||||    
T  20040877 tttctctctccattgtttttgaccaatgagaagagagaagaagaaggttgtaccaaa 20040933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33823676 - 33823612
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  33823676 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 33823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35358917 - 35358853
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||| |||||||||| ||| || || || |||||| |||| |||||    
T  35358917 tttttctctctctattgtttttgtccaatgagaagagagaacaacaaagttgtctcaaaggttgt 35358853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35595968 - 35595904
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| ||||||  | || ||| ||||||||||| ||||    
T  35595968 tttttctctctccattgtttttgaccaatgaaaaaagagcacaacaagattgtcccaaaaattgt 35595904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 41210495 - 41210431
Alignment:
Q  2 ttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    |||||||||||||||||||||||||||| |||| ||| || ||  ||||||||  ||||||||||    
T  41210495 ttttctctctctattgtttttgaccaataagaagagagaaaaaggaggttgtcataaaagttgtt 41210431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43153042 - 43152978
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||||||||||||||| ||| || || || ||||||| || ||||||    
T  43153042 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtcctaagagttgt 43152978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 28501707 - 28501770
Alignment:
Q  2 ttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  28501707 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 28501770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41460205 - 41460300
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||||||||| ||||||||| |||||||| || ||| || ||| ||||||||   |||||||||   ||||| |||| ||||||||||| ||||    
T  41460205 tttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatattattgctct 41460300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8955640 - 8955542
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    ||||||||| |||||||||||| |||||| | |||| | || || ||||||||||||| |||| |    ||||| |||| ||||||| |||||||||||    
T  8955640 tttttctctttctattgtttttaaccaataacaaaaaagaacaacaaggttgtcccaagagttatcatgaaatggttgttcaaatatcattactctttt 8955542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10469929 - 10469851
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgt 79  Q
    |||||||||||| ||||||||||||||||||||| ||| || || || |||||| ||||  ||||   |||||||||||    
T  10469929 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaagattgtaccaaaatgattgt 10469851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26626801 - 26626704
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||||| |||||||||||||||| | |||||| || || |||||||||   ||||||| | | ||||| |||| ||||||| ||| |||||||    
T  26626801 tttttctctctccattgtttttgaccaataacaaaagagaaaaaaaaggttgtcatgaaagttg-taacaaatggttgttcaaatatcattgctctttt 26626704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 33893675 - 33893773
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||||| |||||||||||| ||||| || | |  | || ||||||||||||||||||||   ||||  ||||| ||||||| ||| |||||||    
T  33893675 tttttctctctccattgtttttgacaaatgaaaagatagcacaacaaggttgtcccaaaagttgtagtaaaaaaattgttcaaatatcattgctctttt 33893773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 39595363 - 39595456
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactc 95  Q
    |||||||||||| |||||||||||||||||| || ||| || ||  | |||||| |||||||||| |  ||||| |||| ||||||| |||||||    
T  39595363 tttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtat-caaatggttgttcaaatatcattactc 39595456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 1108091 - 1108120
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||||||||||||    
T  1108091 tctctctctattgtttttgaccaatgagaa 1108120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1760450 - 1760483
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  1760450 tttttctctctctattgtttttgaccaataagaa 1760483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4954555 - 4954620
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    |||||||||||| ||||||||||||| || |||| ||| || || ||||||||| | |||||||||    
T  4954555 tttttctctctccattgtttttgacccataagaagagagaaaaacaaggttgtcactaaagttgtt 4954620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5698310 - 5698257
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||| | |||||| || || |||||||||    
T  5698310 tttttctctctccattgtttttgaccaataacaaaagagaaaaagaaggttgtc 5698257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8442248 - 8442281
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    |||||||||||||||||||| |||||||||||||    
T  8442248 tttttctctctctattgtttctgaccaatgagaa 8442281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11464105 - 11464040
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    |||||||||||| |||||||||||||||| | || ||| || || ||||||||| | |||||||||    
T  11464105 tttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgtt 11464040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11880969 - 11880916
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    ||||||||| || ||||||||||||||||||||| ||| || || |||||||||    
T  11880969 tttttctctttccattgtttttgaccaatgagaagagagaaaaagaaggttgtc 11880916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14914459 - 14914512
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||| |||| |||||| || || ||||||    
T  14914459 tttttctctctccattgtttttgaccaataagaagagataaaaacaaagttgtc 14914512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22920474 - 22920421
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| |||||||||||||||| |||| ||| || || |||||||||    
T  22920474 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtc 22920421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25345427 - 25345480
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    ||||||||||| ||||||||||||||||| |||| ||| || |||||| |||||    
T  25345427 tttttctctctttattgtttttgaccaataagaagagagaaaaataagattgtc 25345480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 30103433 - 30103339
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    ||||||| ||||| ||||||||||||| ||| |||||  || || ||| ||||||||||| || ||| |||||  |||| ||||||| |||||||||    
T  30103433 tttttctttctcttttgtttttgaccattgaaaaaag--aacaacaagattgtcccaaaaattattttaaaatagttgttcaaatatcattactctt 30103339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 39458733 - 39458794
Alignment:
Q  4 ttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||| |||||||||||||||||| || |||||| || || |||||| ||||| ||||    
T  39458733 ttctctctccattgtttttgaccaatgaaaagagataaaaaaaaagttgtcacaaaaattgt 39458794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 125181 - 125245
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||| ||||||||||||||||||||||||| || ||| || ||  | |||||| ||||||||||    
T  125181 tttttttctctctattgtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgt 125245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3263490 - 3263426
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||| |||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  3263490 tttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 3263426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8959249 - 8959313
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| | || ||| || || ||||||||| | ||||||||    
T  8959249 tttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgt 8959313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9596796 - 9596732
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||| ||||| | ||||||||    
T  9596796 tttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgt 9596732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12512882 - 12512946
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||| ||||| | ||||||||    
T  12512882 tttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgt 12512946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17063954 - 17064050
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||| ||||||||| |||||||| || ||| |  ||| ||||||||  ||||||||||   |||||||||| ||| ||| ||| |||||    
T  17063954 tttttctctctccattgtttttaaccaatgaaaagagagagaaatgaggttgtcataaaagttgttagcaaatgattgttcaagtatcattgctctt 17064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17489437 - 17489501
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||| ||||| | ||||||||    
T  17489437 tttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgt 17489501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 19437346 - 19437374
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  19437346 tttttctctctctattgtttttgaccaat 19437374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 27392684 - 27392620
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || ||| || ||  | |||||| ||||||||||    
T  27392684 tttttctctctccattgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttgt 27392620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 29803312 - 29803340
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  29803312 tttttctctctctattgtttttgaccaat 29803340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 36786240 - 36786212
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  36786240 tttttctctctctattgtttttgaccaat 36786212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 40201102 - 40201038
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||| ||||||  |||||| |||||||||||||| | | ||||| ||||||||| ||||||||||    
T  40201102 ttttcctctcttcattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaagttgt 40201038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 35518368 - 35518459
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||||||||||||||||||| |||| ||| || || || ||||||||||||||||| | |||||  |||| ||||||| ||||||||    
T  35518368 tctctctctattgtttttgaccaataagaagagagaacaacaaagttgtcccaaaagttgtatcaaaatagttgttcaaatatcattactct 35518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30340082 - 30340147
Alignment:
Q  1 tttttctctctctattgtttt-tgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||| ||||||||||||| ||| || || ||||||||||||||||||||    
T  30340082 tttttctctctctattgttttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgt 30340147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 8757633 - 8757728
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||||||||| |||||||||||||||| |||| ||| || || |||||||| |||||||||||   |||||  |||| ||||||| ||||||||    
T  8757633 tttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactct 8757728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 22296111 - 22296016
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||||| ||||| ||||||||||||| ||||||  | || ||||||||||||||| ||||  |||||   |||| ||||||||||||||||    
T  22296111 tttttctctctatattgattttgaccaatgaaaaaagagcacaacaaggttgtcccaaaaattgtagaaaaaaagttgttcaaatattattactct 22296016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4114414 - 4114352
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    ||||||||||| |||| || ||||||||||| |||||| ||||||||||||||| ||||||||    
T  4114414 tttttctctctttattattattgaccaatgaaaaaagagaataataaggttgtctcaaaagtt 4114352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6742392 - 6742294
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||||||| | |||||||||||| |||| ||| |  || ||| ||||| ||||||||||  | |||||||||||||| ||| |||||||||||    
T  6742392 tttttctctctctactatttttgaccaataagaagagagagaaagaagattgtcacaaaagttgtcaacaaatgattgtacaattatcattactctttt 6742294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 26273267 - 26273328
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    ||||||||||||||||||||||||| |||| |||  | |||| |||||||||||||||||||    
T  26273267 tctctctctattgtttttgaccaataagaagagaacacaatatggttgtcccaaaagttgtt 26273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11084805 - 11084908
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    |||||||| |||||||||| ||| || || ||||||||  | || || |||||| | |||||||||||||| ||||||| ||||||| ||| ||||| ||    
T  11084805 tttttctccctctattgttattgtccgataagaaaagaggaaaaaaaagttgtcactaaagttgtttaaaattgattgtccaaatatgattcctcttatt 11084904  T
Q  101 catt 104  Q
    ||||    
T  11084905 catt 11084908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 694358 - 694444
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||||||| |||||||||||||||||| |||||| |  ||| ||||||||  ||||||| ||   |||||||||| |||||||    
T  694358 tttttctctctccattgtttttgaccaatgaaaaaagagataaatgaggttgtcataaaagttattagcaaatgattgttcaaatat 694444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24491659 - 24491573
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    ||||||||| |||||||||||| |||||| |||| ||| || |||||| ||||| |||||||||| | ||||  ||||| |||||||    
T  24491659 tttttctctttctattgtttttaaccaataagaagagagaacaataagattgtctcaaaagttgtatcaaaagaattgttcaaatat 24491573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37631349 - 37631263
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||||||||||| ||||||||||||||||||||| ||| || ||  ||||||||  ||||||||||   ||||| |||| |||||||    
T  37631349 tttttctctctccattgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgttagcaaatggttgttcaaatat 37631263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38598331 - 38598269
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    ||||||||||||||||||||||||||||| |||| |||  | || ||||||||| ||||||||    
T  38598331 tttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcacaaaagtt 38598269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43026025 - 43026103
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgt 79  Q
    |||||||||||||||||||||| ||||||||||| ||| || || || |||||| |||| |||||   |||||||||||    
T  43026025 tttttctctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaggttgtaccaaaatgattgt 43026103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4263846 - 4263809
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  4263846 tttttctctctccattgtttttgaccaatgagaaaaga 4263809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21805768 - 21805715
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    ||||||||||||||||| |||||||||||| ||| ||| ||||| |||||||||    
T  21805768 tttttctctctctattgcttttgaccaatgggaagagagaataagaaggttgtc 21805715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23141442 - 23141507
Alignment:
Q  1 tttttctctctctattgtttt-tgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||| | ||||||||| ||||||||||||| ||| || || ||||||||||||||||||||    
T  23141442 tttttctctttttattgttttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgt 23141507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23553232 - 23553297
Alignment:
Q  1 tttttctctctctattgtttt-tgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||| | ||||||||| ||||||||||||| ||| || || ||||||||||||||||||||    
T  23553232 tttttctctttttattgttttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgt 23553297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36383551 - 36383616
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | |||||||||    
T  36383551 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtt 36383616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 1151622 - 1151682
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||| |||||| || || || |||||| |||| |||||    
T  1151622 tctctctctattgtttttgaccaatgaaaaaagagaacaacaaagttgtctcaaaggttgt 1151682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 3366126 - 3366182
Alignment:
Q  7 tctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    |||||| |||||| |||||||||||||| | | ||||||||||||||| ||||||||    
T  3366126 tctctccattgttattgaccaatgagaagaaagaataataaggttgtcacaaaagtt 3366182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11828802 - 11828738
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | || |||||||||| |||||||||    
T  11828802 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgtcctaaaagttgt 11828738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12256990 - 12257054
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| | |  | || ||||||||||||||| ||||    
T  12256990 tttttctctctctattgtttttgaccaataagaagaaaacacaacaaggttgtcccaaaaattgt 12257054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16463381 - 16463445
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||| ||||||||||||||||||||||| |||| |||  | || ||| ||||||||||||||||    
T  16463381 tttttttctctctattgtttttgaccaataagaagagagcacaacaagattgtcccaaaagttgt 16463445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23048065 - 23048001
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  23048065 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 23048001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 26387809 - 26387749
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||| ||||| ||||||||||| ||||||||  | || ||||||||||||||||||||    
T  26387809 tctctctatattgattttgaccaataagaaaagaacacaacaaggttgtcccaaaagttgt 26387749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 27307223 - 27307163
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||| |||||||||||||||| |||| ||| || |||||||||||| | ||||||||    
T  27307223 tctctctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgt 27307163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27329091 - 27329031
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaag 61  Q
    |||||| ||||||||| ||||||||||||||||||||| || || || |||||| ||||||    
T  27329091 tttttccctctctattatttttgaccaatgagaaaagagaacaacaaagttgtctcaaaag 27329031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34141532 - 34141596
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||||||| |||| |||  | || || ||||| |||||||||||    
T  34141532 tttttctctctctattgtttttgaccaataagaagagaacacaacaaagttgttccaaaagttgt 34141596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35705899 - 35705835
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | || ||| ||||||||||||||||    
T  35705899 tttttctctctccattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgt 35705835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37064147 - 37064211
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||| ||| |||| ||||||||||||||||| ||| || || |||||| |||||||||||||    
T  37064147 tttttctatctttattatttttgaccaatgagaagagaaaacaacaaggttatcccaaaagttgt 37064211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45202114 - 45202050
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||||| |||||| || |||  | || ||||||||||||||||||||    
T  45202114 tttttctctctccattgtttttgatcaatgaaaagagagcacaacaaggttgtcccaaaagttgt 45202050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 28508528 - 28508477
Alignment:
Q  46 aaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    ||||||||||||||||||||   |||||| |||||||||||| |||||||||    
T  28508528 aaggttgtcccaaaagttgtcacaaaatggttgtacaaatatcattactctt 28508477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 32755775 - 32755862
Alignment:
Q  9 tctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||||||||||||||| | || ||| || ||||||| |||| ||||||||||   |||||| ||||| |||||| | ||||||    
T  32755775 tctctattgtttttgaccaatcaaaagagagaaaaataaggctgtctcaaaagttgtcacaaaatggttgtagaaatatcactactct 32755862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35008083 - 35007985
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt-ttaaaaatgattgtacaaatattattactctttt 99  Q
    ||||||||| || ||||| |||||||||||| || |||  | || ||||||||||||||||||||  |||||| | |||| ||||||| |||||||||||    
T  35008083 tttttctctatccattgtgtttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagtaaaaaag-ttgttcaaatatcattactctttt 35007985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 36763502 - 36763407
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    ||||||||||||  ||||||||||||||||| || ||| || || |||||||||  |||| ||||| | ||||| |||| ||||||| ||| ||||    
T  36763502 tttttctctctccgttgtttttgaccaatgaaaagagagaaaaagaaggttgtcataaaaattgttaacaaatggttgttcaaatatcattgctct 36763407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 37966446 - 37966509
Alignment:
Q  2 ttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  37966446 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 37966509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 304974 - 304896
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgt 79  Q
    |||||||||||| ||||||||||||||||||||| ||  || || || |||||| |||| ||||| | |||||| ||||    
T  304974 tttttctctctcaattgtttttgaccaatgagaagagtgaacaacaaagttgtctcaaaggttgtatcaaaatggttgt 304896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1277820 - 1277882
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    ||||| ||||||||||||| |||||||||||||| ||| ||||  ||| |||||| |||||||    
T  1277820 tttttttctctctattgttattgaccaatgagaagagagaatatcaagattgtcctaaaagtt 1277882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 7086106 - 7086076
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  7086106 tttttctctctctattgtttttgaccaatga 7086076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17999833 - 17999895
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    |||||||||||  |||||||||||||||||| || | || | || ||||||||||||||||||    
T  17999833 tttttctctctgcattgtttttgaccaatgaaaagatatcacaacaaggttgtcccaaaagtt 17999895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 23344971 - 23344941
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  23344971 tttttctctctctattgtttttgaccaatga 23344941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34373097 - 34373155
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaa 59  Q
    ||||| |||||||||||||||||||||||||||| ||| || || || |||||| ||||    
T  34373097 tttttttctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaa 34373155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35203731 - 35203633
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||||  |||||||||||||||||| || | |  | || ||||||||||||||| ||||   ||||  ||||| ||||||| |||||||||||    
T  35203731 tttttctctcttcattgtttttgaccaatgaaaagatagcacaacaaggttgtcccaaaaattgtagcaaaaaaattgttcaaatatcattactctttt 35203633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38027597 - 38027535
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    ||||||||||||||||||||||||||||| |||| |||  | || ||||||||  ||||||||    
T  38027597 tttttctctctctattgtttttgaccaataagaagagaacacaacaaggttgtttcaaaagtt 38027535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 42081126 - 42081156
Alignment:
Q  1 tttttctctctctattgtttttgaccaatga 31  Q
    |||||||||||||||||||||||||||||||    
T  42081126 tttttctctctctattgtttttgaccaatga 42081156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 546367 - 546334
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  546367 tttttctctctctattgttttggaccaatgagaa 546334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4842501 - 4842464
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaaga 38  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  4842501 tttttctctctccattgtttttgaccaatgaaaaaaga 4842464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 11175180 - 11175143
Alignment:
Q  50 ttgtcccaaaagttgtttaaaaatgattgtacaaatat 87  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  11175180 ttgttccaaaagttgtttaaaaatgattgtagaaatat 11175143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 3839506 - 3839598
Alignment:
Q  8 ctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttttt 100  Q
    ||||||||| |||||||||||| | |||||| || |||||  ||||| |||||||| |   |||||||||||   ||||| ||||||||||||    
T  3839506 ctctctattatttttgaccaataaaaaaagagaacaataaaattgtcacaaaagttatactaaaatgattgttagaatatcattactcttttt 3839598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 5852553 - 5852609
Alignment:
Q  7 tctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    ||||||||||||||||||| ||| |||| |||  | || ||||||||||||||||||    
T  5852553 tctctctattgtttttgacaaataagaagagaacacaacaaggttgtcccaaaagtt 5852609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9384464 - 9384528
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||| |||||||||| ||| | | ||||| ||| ||||| ||||||||||    
T  9384464 tttttctctctccattgttattgaccaatgcgaagaaagaataacaagattgtcacaaaagttgt 9384528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 13881184 - 13881248
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||| ||||| |||||||||||||||||| || |||  | ||||| |||||| ||||||||||    
T  13881184 tttttcactctccattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgt 13881248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14021309 - 14021373
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||| ||||| |||||||||||||||||| || |||  | ||||| |||||| ||||||||||    
T  14021309 tttttcactctccattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgt 14021373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 18508167 - 18508195
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  18508167 tttttctctctctattgtttttgaccaat 18508195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 18749345 - 18749317
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  18749345 tttttctctctctattgtttttgaccaat 18749317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33857306 - 33857370
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| | | || ||||| |||||| | ||||||||    
T  33857306 tttttctctctccattgtttttgaccaataagaagacagaaaaataaagttgtcaccaaagttgt 33857370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37076742 - 37076806
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||| |||||| |||||| |||||||||||||| | | ||||| ||||||||| ||||| ||||    
T  37076742 tttttttctctccattgttattgaccaatgagaagaaagaataacaaggttgtcacaaaaattgt 37076806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43205182 - 43205246
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||  |||||||||||||||||| || |||  | || || |||||||||||||||||    
T  43205182 tttttctctcttcattgtttttgaccaatgaaaagagagcacaacaaagttgtcccaaaagttgt 43205246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44484638 - 44484574
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || || |||||| | ||||||||    
T  44484638 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgt 44484574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 44897719 - 44897779
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||| ||||||||||| | || |||  | || ||||||||||||||||||||    
T  44897719 tctctctctattgattttgaccaataaaaagagaacacaacaaggttgtcccaaaagttgt 44897779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 608643 - 608545
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||||| ||||||||||||||||||||| ||| || || ||||||||||||| ||||||   |||||  |||| ||||||| ||| |||||||    
T  608643 tttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaacagttgtaccaaaatagttgttcaaatatcattgctctttt 608545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 23653875 - 23653778
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactcttt 98  Q
    |||||||||||| ||||||||||||| ||||||| ||| || ||| ||||||||  ||||||||||   ||||| |||| ||||||||||| ||||||    
T  23653875 tttttctctctcaattgtttttgacctatgagaagagagaaaaatgaggttgtcataaaagttgttagcaaatggttgttcaaatattattgctcttt 23653778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 7304083 - 7304023
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||||||||||||||||| ||| || ||| |||||||| ||||||||||    
T  7304083 tctctctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgt 7304023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17442911 - 17442975
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||||||||||| |||| |||| |||  | |||||||||||||||||||||||    
T  17442911 tttttctctctctattgtttttgatcaataagaagagaacacaataaggttgtcccaaaagttgt 17442975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 19713083 - 19713182
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt-taaaaatgattgtacaaatattattactctttt 99  Q
    |||||||||||| ||||||||| |||||||| || |||  | || ||||||||||||||||||||| |||||| | |||| ||||||| |||||||||||    
T  19713083 tttttctctctccattgttttttaccaatgaaaagagagcacaacaaggttgtcccaaaagttgttgtaaaaaag-ttgttcaaatatcattactctttt 19713181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 22422239 - 22422335
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||| |||||||||||| |||||||| ||| || || || ||||| |||||||||||   ||||| ||||| ||||||| |||||||||    
T  22422239 tttttctctctccattgtttttgactaatgagaagagagaacaacaaagttgtaccaaaagttgtaccaaaataattgttcaaatatcattactctt 22422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12044419 - 12044484
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    |||||||||||| ||||||||||||||||||||||||| || ||  ||||||||  ||||||||||    
T  12044419 tttttctctctccattgtttttgaccaatgagaaaagagaaaaaggaggttgtcataaaagttgtt 12044484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6997532 - 6997437
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||||||||||| || ||||||||||||||| || |||  | || ||||||||||||||||||||   ||||  ||||| ||||||| ||||||||    
T  6997532 tttttctctctccatcgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaaattgttcaaatatcattactct 6997437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34792095 - 34792157
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    ||||||||| ||||||||||||||||||| | ||||||  | || ||||||||||||||||||    
T  34792095 tttttctctttctattgtttttgaccaataaaaaaagaacacaacaaggttgtcccaaaagtt 34792157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11742966 - 11742933
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  11742966 tttttctctctctattgtttttgaccaatgagaa 11742933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16743248 - 16743195
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| ||||||||||||||||||||| ||| || ||| ||||||||    
T  16743248 tttttctctctcaattgtttttgaccaatgagaagagagaaaaatgaggttgtc 16743195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9395319 - 9395255
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | || ||| ||||||||||||||||    
T  9395319 tttttctctctccattgtttttgaccaatgataagagagcacaacaagattgtcccaaaagttgt 9395255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1897775 - 1897841
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgttt 67  Q
    |||||||||||  |||||||||||||||||| || ||| || ||  |||||||| ||||||||||||    
T  1897775 tttttctctcttcattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgttt 1897841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2582751 - 2582817
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgttt 67  Q
    |||||||||||| ||||||||||| |||||| || ||| || ||  |||||||| ||||||||||||    
T  2582751 tttttctctctccattgtttttgatcaatgaaaagagagaaaaaagaggttgtcacaaaagttgttt 2582817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21443777 - 21443831
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcc 55  Q
    |||||||||||| |||||||||||||||||| || |||||| |  ||||||||||    
T  21443777 tttttctctctccattgtttttgaccaatgaaaagagataaaatgaaggttgtcc 21443831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32457234 - 32457168
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgttt 67  Q
    |||||||||||| |||||||||||||||||| |||||| || ||  ||||| || ||||| ||||||    
T  32457234 tttttctctctccattgtttttgaccaatgaaaaaagagaaaaaagaggttatcacaaaatttgttt 32457168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11017471 - 11017536
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgtt 66  Q
    |||||||||||| |||||||||||||||| |||| ||| |  || ||||||||| | |||||||||    
T  11017471 tttttctctctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtt 11017536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28549003 - 28548907
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc-ccaaaagttgtttaaaaatgattgtacaaatattattactctt 97  Q
    |||||||||||| ||||||||| |||||||| || ||| || || || |||||| ||||||||||| | |||||| |||| ||||||  |||||||||    
T  28549003 tttttctctctccattgtttttaaccaatgaaaagagaaaaaaaaaaagttgtcaccaaaagttgtat-aaaatggttgttcaaataacattactctt 28548907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32644701 - 32644754
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| ||||||||| ||||||||||| ||| || ||| ||||||||    
T  32644701 tttttctctctccattgttttttaccaatgagaagagagaaaaatgaggttgtc 32644754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 1803962 - 1804022
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  1803962 tctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 1804022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2165282 - 2165218
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | |  ||||||||| ||||||||||    
T  2165282 tttttctctctccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgt 2165218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2176915 - 2176851
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | |  ||||||||| ||||||||||    
T  2176915 tttttctctctccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgt 2176851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 3339481 - 3339453
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  3339481 tttttctctctctattgtttttgaccaat 3339453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10557498 - 10557562
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | || ||| |||| |||||||||||    
T  10557498 tttttctctctccattgtttttgaccaatgaaaagagagtacaacaagattgttccaaaagttgt 10557562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27790217 - 27790157
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaag 61  Q
    ||||||||||| ||||||||||||||||| | || |||  | || ||||||||||||||||    
T  27790217 tttttctctctatattgtttttgaccaataaaaagagaacacaacaaggttgtcccaaaag 27790157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 28883728 - 28883700
Alignment:
Q  1 tttttctctctctattgtttttgaccaat 29  Q
    |||||||||||||||||||||||||||||    
T  28883728 tttttctctctctattgtttttgaccaat 28883700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33491827 - 33491879
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgt 53  Q
    ||||||||||||||| ||||||||||||| |||| ||| |  |||||||||||    
T  33491827 tttttctctctctatagtttttgaccaataagaagagagagaaataaggttgt 33491879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 88897 - 88959
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    |||||||||||| |||||||||||||||| |||||||| || |||||||||||| | ||||||    
T  88897 tttttctctctccattgtttttgaccaataagaaaagaaaaaaataaggttgtcactaaagtt 88959  T

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Target: scaffold0514 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1829 - 1765
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||||||| |||||||||||| |||| |||  |||| ||| ||||||||||||||||    
T  1829 tttttctctctctattatttttgaccaataagaagagaacataacaagattgtcccaaaagttgt 1765  T

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Target: scaffold0058 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3032 - 3096
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | ||||| |||||||||||||||||    
T  3032 tttttctctctccattgtttttgaccaatgaaaagagagcacaataaagttgtcccaaaagttgt 3096  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 145140 - 145200
Alignment:
Q  5 tctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||||||||||||||| |||| |||  | || ||||||||||||||||||||    
T  145140 tctctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgt 145200  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 147238 - 147174
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||| |||| ||| || || ||||||||| | ||||||||    
T  147238 tttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 147174  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9830 - 9767
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttg 64  Q
    ||||||||||||||||||||||||||||||| || ||| || ||  | |||||| |||||||||    
T  9830 tttttctctctctattgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttg 9767  T

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Target: scaffold0076 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 11284 - 11347
Alignment:
Q  4 ttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgttt 67  Q
    ||||||||| |||||||||||||||||| || ||| || ||  |||||||| ||||||||||||    
T  11284 ttctctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgttt 11347  T

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Target: scaffold0119 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23271 - 23209
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagtt 63  Q
    ||||| ||||||||||||| |||||||||||||| ||| ||||  ||| |||||| |||||||    
T  23271 tttttttctctctattgttattgaccaatgagaagagagaatatcaagattgtcctaaaagtt 23209  T

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Target: scaffold0193 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24762 - 24815
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtc 54  Q
    |||||||||||| ||||||||| |||||| |||| ||| || ||||||||||||    
T  24762 tttttctctctccattgtttttaaccaataagaagagagaaaaataaggttgtc 24815  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14531 - 14498
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  14531 tttttctctctctattgttttggaccaatgagaa 14498  T

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Target: scaffold0592 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 999 - 1063
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    ||||||||||||| ||||||||||||||||| || ||| || || || ||| || ||||||||||    
T  999 tttttctctctctgttgtttttgaccaatgaaaagagagaacaacaaagttatctcaaaagttgt 1063  T

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Target: scaffold0432 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 6540 - 6592
Alignment:
Q  44 ataaggttgtcccaaaagttgtttaaaaatgattgtacaaatattattactct 96  Q
    |||| |||||| ||||||||||| |||||||||||| ||||||| ||| ||||    
T  6540 ataaagttgtcacaaaagttgttaaaaaatgattgttcaaatatcatttctct 6592  T

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Target: scaffold0286 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17127 - 17191
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||||||||| || |||  | |  ||||||||| ||||||||||    
T  17127 tttttctctctccattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgt 17191  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15170 - 15107
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||| |||||||| |||||| || || || |||||| ||||||||||    
T  15170 tttttctctctccattgtttttaaccaatgaaaaaagagaaaaagaa-gttgtcacaaaagttgt 15107  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 204429 - 204365
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||| |||||||||||||||||||| |||| ||| || ||  || ||||| ||||||||||    
T  204429 tttttctccctctattgtttttgaccaataagaagagagaaaaagtagattgtcacaaaagttgt 204365  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18684 - 18748
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| |||||||||||| ||| |||| ||| || ||||||||| || | ||||||||    
T  18684 tttttctctctccattgtttttgactaataagaatagagaaaaataaggttatcactaaagttgt 18748  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 249124 - 249060
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaagataataataaggttgtcccaaaagttgt 65  Q
    |||||||||||| ||||||||||| |||| |||| ||| || || ||||||||| | ||||||||    
T  249124 tttttctctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgt 249060  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 395950 - 395986
Alignment:
Q  1 tttttctctctctattgtttttgaccaatgagaaaag 37  Q
    |||||||||||||||||||||| |||||||| |||||    
T  395950 tttttctctctctattgtttttaaccaatgaaaaaag 395986  T

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