View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9885_low_10 (Length: 245)
Name: NF9885_low_10
Description: NF9885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9885_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 4823544 - 4823313
Alignment:
| Q |
1 |
cggattttcttcctatacgtgatttcaaaatcaaacttttgatcactagcttaaactactcgagtcccttactactcggaccaacatatagtttgtccag |
100 |
Q |
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| T |
4823544 |
cggattttcttcctatacgtgatttcaaaatcaaacttttgatcactagcttaaactactcgagtcccttactactcggaccaacatatagtttgtccag |
4823445 |
T |
|
| Q |
101 |
aaaccctatttcatttaaaagcaagcacttaagtgcaccaaaaacttaaaacttagttgaatctaagtctatatggtacatagtatgatataaccagtgc |
200 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4823444 |
aaaacctatttcatttaaaagcaagcacttaagtgcaccaaaaacttaaaacttagttgaatctaagtctatatggtacatagtatgatataaccagtgc |
4823345 |
T |
|
| Q |
201 |
tttaaaacgagatggcacaatccttaatattg |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
4823344 |
tttaaaacgagatggcacaatccttaatattg |
4823313 |
T |
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