View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9885_low_7 (Length: 255)
Name: NF9885_low_7
Description: NF9885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9885_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 43450591 - 43450826
Alignment:
| Q |
1 |
tgttaaattttctagaatgaagttaacaagaattaggtcaattttggaaattttattggcctctttgattttaattaaggcctcctgaaatttaaattgg |
100 |
Q |
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| T |
43450591 |
tgttaaattttctagaatgaagttaacaagaattaggtcaattttggaaattttattggcctctttgattttaattaaggcctcctgaaatttaaattgg |
43450690 |
T |
|
| Q |
101 |
actgctcaaaatttgctgttagttgtttgtgcatatagtcatggtccgtgattttctccggtaccaacggatgatttttgtttggtgacactttgtttcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
43450691 |
actgctcaaaatttgctgttagttgtttgtgcatatagtcatggtccgtgattttctccggtaccaacggatgacttttgtttggtgacactttgtttcc |
43450790 |
T |
|
| Q |
201 |
tataatagctagaaaacaaaattgtatttgcactga |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
43450791 |
tataatagctagaaaacaaaattgtatttgcactga |
43450826 |
T |
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