View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9888_low_6 (Length: 344)

Name: NF9888_low_6
Description: NF9888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9888_low_6
NF9888_low_6
[»] chr7 (57 HSPs)
chr7 (2-344)||(24609931-24610272)
chr7 (128-207)||(11344027-11344106)
chr7 (128-207)||(48930925-48931004)
chr7 (128-207)||(35133165-35133244)
chr7 (40-114)||(38880568-38880642)
chr7 (128-204)||(28476444-28476520)
chr7 (37-125)||(41554103-41554191)
chr7 (38-125)||(5348571-5348658)
chr7 (128-207)||(25068275-25068354)
chr7 (146-203)||(38880422-38880479)
chr7 (37-125)||(24069373-24069461)
chr7 (46-125)||(24350818-24350895)
chr7 (37-125)||(41553413-41553501)
chr7 (37-125)||(41553758-41553846)
chr7 (128-211)||(3876042-3876125)
chr7 (50-125)||(28476264-28476339)
chr7 (50-125)||(35132984-35133059)
chr7 (39-125)||(24770272-24770358)
chr7 (61-130)||(5000003-5000072)
chr7 (52-125)||(22742983-22743056)
chr7 (36-125)||(37837437-37837526)
chr7 (20-111)||(3394485-3394574)
chr7 (143-207)||(4999823-4999887)
chr7 (37-109)||(5775230-5775301)
chr7 (135-206)||(25255452-25255521)
chr7 (155-207)||(31481892-31481944)
chr7 (57-112)||(1769170-1769225)
chr7 (172-211)||(3222906-3222945)
chr7 (42-112)||(35665127-35665197)
chr7 (137-207)||(38439934-38440004)
chr7 (153-206)||(11654043-11654096)
chr7 (138-207)||(24069195-24069264)
chr7 (137-206)||(46822538-46822607)
chr7 (51-111)||(1749140-1749200)
chr7 (37-125)||(11343834-11343922)
chr7 (37-124)||(9977186-9977273)
chr7 (175-210)||(37890165-37890200)
chr7 (174-217)||(40741822-40741865)
chr7 (50-125)||(42978647-42978722)
chr7 (50-125)||(46700072-46700147)
chr7 (171-217)||(2407850-2407896)
chr7 (176-206)||(8169279-8169309)
chr7 (167-217)||(25286983-25287033)
chr7 (165-211)||(26017332-26017377)
chr7 (42-111)||(3224403-3224472)
chr7 (174-211)||(10574789-10574826)
chr7 (174-211)||(14733741-14733778)
chr7 (39-128)||(22087343-22087432)
chr7 (166-211)||(30992498-30992542)
chr7 (36-121)||(38798804-38798889)
chr7 (134-207)||(46821546-46821619)
chr7 (37-125)||(5792820-5792908)
chr7 (175-211)||(32312925-32312961)
chr7 (175-211)||(34893511-34893547)
chr7 (174-210)||(35261553-35261589)
chr7 (37-125)||(39328769-39328857)
chr7 (37-121)||(45349782-45349866)
[»] chr8 (63 HSPs)
chr8 (128-212)||(14585895-14585979)
chr8 (37-125)||(8443488-8443576)
chr8 (37-113)||(21237814-21237890)
chr8 (37-125)||(29617251-29617339)
chr8 (36-126)||(5333452-5333542)
chr8 (40-125)||(15344336-15344420)
chr8 (40-125)||(15433401-15433485)
chr8 (40-125)||(15524705-15524789)
chr8 (143-207)||(18890491-18890555)
chr8 (137-204)||(8868035-8868102)
chr8 (50-125)||(18890676-18890751)
chr8 (128-207)||(42046439-42046518)
chr8 (144-217)||(19443846-19443919)
chr8 (38-126)||(26469122-26469210)
chr8 (143-207)||(34610069-34610133)
chr8 (37-124)||(8981187-8981274)
chr8 (128-211)||(26468938-26469021)
chr8 (128-207)||(43833788-43833867)
chr8 (39-125)||(471143-471229)
chr8 (51-125)||(14585715-14585789)
chr8 (39-113)||(14916176-14916250)
chr8 (128-206)||(41896735-41896812)
chr8 (40-125)||(1236674-1236758)
chr8 (40-125)||(1239374-1239458)
chr8 (176-217)||(34680666-34680707)
chr8 (143-207)||(18846261-18846325)
chr8 (37-125)||(33214648-33214736)
chr8 (165-211)||(8054482-8054527)
chr8 (39-125)||(8826238-8826323)
chr8 (39-125)||(33347498-33347583)
chr8 (55-125)||(42046263-42046333)
chr8 (172-217)||(15344560-15344605)
chr8 (172-217)||(15433625-15433670)
chr8 (172-217)||(15524929-15524974)
chr8 (170-207)||(40618876-40618913)
chr8 (162-206)||(470951-470995)
chr8 (167-207)||(3673687-3673727)
chr8 (172-211)||(1236497-1236536)
chr8 (174-217)||(12654326-12654369)
chr8 (170-217)||(16247017-16247064)
chr8 (170-217)||(27498159-27498206)
chr8 (50-125)||(39657491-39657566)
chr8 (18-113)||(3240389-3240480)
chr8 (165-211)||(5457466-5457511)
chr8 (189-226)||(11267286-11267324)
chr8 (165-206)||(589029-589069)
chr8 (165-206)||(624853-624893)
chr8 (170-211)||(6314913-6314954)
chr8 (174-211)||(9799685-9799722)
chr8 (65-126)||(24419142-24419203)
chr8 (36-73)||(27110494-27110531)
chr8 (170-207)||(28086615-28086652)
chr8 (174-211)||(30568120-30568157)
chr8 (53-113)||(5046793-5046853)
chr8 (175-211)||(7579523-7579559)
chr8 (174-206)||(21238040-21238072)
chr8 (9-78)||(26469232-26469297)
chr8 (175-211)||(28296783-28296819)
chr8 (175-211)||(31712748-31712784)
chr8 (143-211)||(31720643-31720711)
chr8 (167-207)||(40211103-40211143)
chr8 (179-223)||(40490202-40490246)
chr8 (167-207)||(41684619-41684659)
[»] chr2 (60 HSPs)
chr2 (37-125)||(10929697-10929785)
chr2 (128-207)||(10237011-10237090)
chr2 (128-211)||(14955755-14955838)
chr2 (128-206)||(3309171-3309249)
chr2 (40-125)||(17249127-17249211)
chr2 (40-125)||(32448599-32448683)
chr2 (143-207)||(19595694-19595758)
chr2 (46-125)||(10237196-10237275)
chr2 (39-114)||(12554172-12554247)
chr2 (128-211)||(14416381-14416464)
chr2 (42-113)||(29574620-29574691)
chr2 (50-125)||(30400015-30400090)
chr2 (40-126)||(17151458-17151544)
chr2 (36-113)||(24461474-24461551)
chr2 (40-124)||(23933600-23933684)
chr2 (137-204)||(16376216-16376283)
chr2 (137-207)||(6358676-6358746)
chr2 (38-112)||(33760186-33760260)
chr2 (143-200)||(3460527-3460584)
chr2 (40-125)||(31128760-31128845)
chr2 (40-113)||(37416745-37416818)
chr2 (143-207)||(3465576-3465640)
chr2 (53-113)||(12647101-12647161)
chr2 (50-125)||(3308990-3309065)
chr2 (50-125)||(14955574-14955649)
chr2 (172-211)||(32448419-32448458)
chr2 (143-217)||(12553965-12554039)
chr2 (136-202)||(18107550-18107616)
chr2 (137-211)||(19598074-19598148)
chr2 (39-125)||(25509048-25509134)
chr2 (128-206)||(34128480-34128558)
chr2 (40-113)||(6436642-6436715)
chr2 (172-217)||(17248944-17248989)
chr2 (139-207)||(32519026-32519096)
chr2 (172-207)||(37994542-37994577)
chr2 (37-111)||(4264504-4264578)
chr2 (165-207)||(5754698-5754739)
chr2 (167-217)||(30399825-30399875)
chr2 (40-94)||(37994314-37994368)
chr2 (170-211)||(1415814-1415855)
chr2 (170-211)||(1421932-1421973)
chr2 (174-211)||(11550340-11550377)
chr2 (166-211)||(11931268-11931312)
chr2 (39-120)||(19595888-19595969)
chr2 (176-217)||(24461702-24461743)
chr2 (40-113)||(28533946-28534019)
chr2 (174-211)||(30923259-30923296)
chr2 (142-207)||(32092140-32092205)
chr2 (174-211)||(32197536-32197573)
chr2 (174-207)||(37884056-37884089)
chr2 (68-125)||(41694684-41694741)
chr2 (37-125)||(1415589-1415677)
chr2 (175-211)||(4878408-4878444)
chr2 (175-211)||(12366272-12366308)
chr2 (175-211)||(15920278-15920314)
chr2 (175-207)||(18089076-18089108)
chr2 (175-211)||(18141155-18141191)
chr2 (37-125)||(19028894-19028982)
chr2 (175-207)||(26491705-26491737)
chr2 (128-207)||(28871585-28871662)
[»] chr4 (58 HSPs)
chr4 (129-207)||(33332384-33332462)
chr4 (36-125)||(52944352-52944441)
chr4 (128-211)||(6155010-6155093)
chr4 (136-217)||(36161955-36162036)
chr4 (36-112)||(12199685-12199761)
chr4 (137-217)||(43853688-43853768)
chr4 (129-196)||(7393435-7393502)
chr4 (18-125)||(2069559-2069662)
chr4 (128-217)||(27652179-27652268)
chr4 (143-207)||(18936033-18936097)
chr4 (143-207)||(36194959-36195023)
chr4 (136-216)||(52933734-52933814)
chr4 (128-207)||(1621305-1621384)
chr4 (42-113)||(36161758-36161829)
chr4 (19-125)||(31891266-31891372)
chr4 (36-121)||(10496376-10496461)
chr4 (34-115)||(52060912-52060993)
chr4 (2-111)||(6155219-6155324)
chr4 (40-112)||(9643433-9643505)
chr4 (143-207)||(37465724-37465788)
chr4 (19-113)||(22300877-22300967)
chr4 (134-207)||(42032323-42032396)
chr4 (9-111)||(51888204-51888302)
chr4 (37-113)||(28857444-28857520)
chr4 (128-196)||(48350999-48351067)
chr4 (50-125)||(27651999-27652074)
chr4 (50-125)||(33332548-33332623)
chr4 (39-125)||(9048708-9048794)
chr4 (129-211)||(31891073-31891159)
chr4 (166-211)||(46716568-46716612)
chr4 (41-125)||(8670531-8670615)
chr4 (37-125)||(21662479-21662567)
chr4 (37-125)||(21671243-21671331)
chr4 (175-207)||(28857672-28857704)
chr4 (42-125)||(36204358-36204446)
chr4 (166-217)||(12493595-12493646)
chr4 (36-103)||(18048924-18048991)
chr4 (19-111)||(22038795-22038883)
chr4 (176-211)||(35395465-35395500)
chr4 (82-125)||(47320391-47320434)
chr4 (62-113)||(52933934-52933985)
chr4 (50-112)||(36194764-36194826)
chr4 (50-115)||(1621493-1621558)
chr4 (166-211)||(9549828-9549872)
chr4 (130-211)||(9714148-9714228)
chr4 (170-211)||(13634382-13634423)
chr4 (166-207)||(14542190-14542230)
chr4 (166-211)||(44374949-44374993)
chr4 (172-217)||(51888007-51888052)
chr4 (182-211)||(52555425-52555454)
chr4 (36-125)||(56040625-56040714)
chr4 (37-125)||(10258875-10258963)
chr4 (175-211)||(24100558-24100594)
chr4 (37-113)||(26633662-26633738)
chr4 (176-208)||(38545830-38545862)
chr4 (175-211)||(38943817-38943853)
chr4 (167-207)||(52979008-52979048)
chr4 (175-211)||(56236491-56236527)
[»] chr5 (37 HSPs)
chr5 (40-125)||(8088191-8088275)
chr5 (128-207)||(2979100-2979179)
chr5 (143-211)||(35920786-35920854)
chr5 (128-207)||(14211442-14211521)
chr5 (128-206)||(19103262-19103340)
chr5 (128-217)||(28540690-28540779)
chr5 (155-217)||(16758781-16758843)
chr5 (128-206)||(24874744-24874822)
chr5 (143-205)||(39567500-39567562)
chr5 (37-112)||(16758561-16758636)
chr5 (50-125)||(28540885-28540960)
chr5 (37-125)||(41630523-41630611)
chr5 (50-125)||(2979285-2979360)
chr5 (50-125)||(14211261-14211336)
chr5 (128-211)||(19121127-19121210)
chr5 (18-125)||(35920975-35921078)
chr5 (174-211)||(15710947-15710984)
chr5 (40-125)||(31391732-31391817)
chr5 (176-217)||(36057106-36057147)
chr5 (39-112)||(38110940-38111013)
chr5 (171-211)||(8088014-8088054)
chr5 (50-126)||(10722795-10722871)
chr5 (176-211)||(28423710-28423745)
chr5 (175-218)||(33486236-33486279)
chr5 (37-111)||(10332541-10332615)
chr5 (183-217)||(12628188-12628222)
chr5 (166-211)||(5378698-5378742)
chr5 (40-125)||(6216922-6217007)
chr5 (174-207)||(8984794-8984827)
chr5 (178-211)||(26905309-26905342)
chr5 (182-211)||(34866843-34866872)
chr5 (37-125)||(14726440-14726528)
chr5 (175-211)||(17218127-17218163)
chr5 (167-207)||(24229589-24229629)
chr5 (37-125)||(25980179-25980267)
chr5 (175-211)||(40775165-40775201)
chr5 (166-210)||(41358430-41358473)
[»] chr3 (74 HSPs)
chr3 (143-211)||(16235656-16235724)
chr3 (9-125)||(35175401-35175513)
chr3 (128-211)||(53508437-53508520)
chr3 (40-126)||(628901-628986)
chr3 (130-207)||(41818432-41818509)
chr3 (128-204)||(42460964-42461040)
chr3 (128-207)||(21289608-21289687)
chr3 (36-113)||(4821827-4821904)
chr3 (40-125)||(14859514-14859599)
chr3 (40-125)||(53807837-53807921)
chr3 (143-207)||(8914942-8915006)
chr3 (143-207)||(27706020-27706084)
chr3 (143-207)||(51923957-51924021)
chr3 (40-113)||(12947265-12947338)
chr3 (38-126)||(29239365-29239453)
chr3 (50-125)||(7546649-7546724)
chr3 (50-125)||(8914746-8914821)
chr3 (128-199)||(27856380-27856451)
chr3 (172-211)||(50194137-50194176)
chr3 (42-113)||(53508252-53508323)
chr3 (129-200)||(38142741-38142814)
chr3 (50-123)||(21313070-21313143)
chr3 (36-125)||(33579900-33579989)
chr3 (143-211)||(3085092-3085160)
chr3 (143-207)||(7546846-7546910)
chr3 (128-207)||(51487297-51487381)
chr3 (163-206)||(14859734-14859777)
chr3 (54-125)||(16235464-16235535)
chr3 (50-125)||(21289793-21289868)
chr3 (50-125)||(42460784-42460858)
chr3 (38-113)||(44805052-44805127)
chr3 (50-113)||(50194326-50194389)
chr3 (50-125)||(51303622-51303697)
chr3 (50-125)||(51923761-51923836)
chr3 (137-211)||(52115807-52115881)
chr3 (174-211)||(628725-628762)
chr3 (176-217)||(4822057-4822098)
chr3 (50-123)||(7887424-7887497)
chr3 (40-125)||(26716086-26716171)
chr3 (174-211)||(32881160-32881197)
chr3 (39-111)||(6889874-6889946)
chr3 (171-211)||(20464766-20464806)
chr3 (37-125)||(29922078-29922166)
chr3 (37-125)||(29971231-29971319)
chr3 (175-211)||(35501443-35501479)
chr3 (36-103)||(4396335-4396402)
chr3 (184-223)||(25460776-25460815)
chr3 (174-217)||(35175653-35175696)
chr3 (144-206)||(1650176-1650238)
chr3 (37-115)||(32246468-32246546)
chr3 (167-217)||(36910561-36910611)
chr3 (38-124)||(53099812-53099898)
chr3 (170-207)||(9797339-9797376)
chr3 (174-211)||(17238058-17238095)
chr3 (174-211)||(20252059-20252096)
chr3 (36-125)||(20464949-20465038)
chr3 (170-211)||(21533610-21533651)
chr3 (170-207)||(46304326-46304363)
chr3 (170-211)||(47041849-47041890)
chr3 (170-211)||(48650535-48650576)
chr3 (154-207)||(55061754-55061807)
chr3 (167-207)||(7448719-7448759)
chr3 (167-207)||(7456861-7456901)
chr3 (176-208)||(7658422-7658454)
chr3 (175-207)||(10977647-10977679)
chr3 (179-207)||(11225762-11225790)
chr3 (37-125)||(12149763-12149851)
chr3 (175-211)||(25939170-25939206)
chr3 (154-198)||(26715936-26715980)
chr3 (175-211)||(33076689-33076725)
chr3 (175-211)||(36540371-36540407)
chr3 (175-211)||(36623931-36623967)
chr3 (37-121)||(45424819-45424903)
chr3 (175-211)||(48652117-48652153)
[»] scaffold0021 (1 HSPs)
scaffold0021 (136-211)||(4370-4445)
[»] chr6 (40 HSPs)
chr6 (128-211)||(30776880-30776963)
chr6 (128-207)||(8102943-8103022)
chr6 (3-125)||(30493525-30493643)
chr6 (138-206)||(14802055-14802123)
chr6 (128-211)||(679325-679408)
chr6 (38-113)||(26588463-26588538)
chr6 (129-207)||(1523621-1523699)
chr6 (143-211)||(31851682-31851750)
chr6 (50-125)||(14801863-14801938)
chr6 (18-113)||(34185684-34185775)
chr6 (150-207)||(22571628-22571685)
chr6 (40-109)||(28981203-28981272)
chr6 (50-125)||(546066-546142)
chr6 (128-200)||(546248-546320)
chr6 (36-112)||(679131-679207)
chr6 (155-211)||(10084942-10084998)
chr6 (50-125)||(8102762-8102837)
chr6 (37-124)||(30894623-30894710)
chr6 (170-217)||(32060124-32060171)
chr6 (39-125)||(528329-528415)
chr6 (39-125)||(1933671-1933757)
chr6 (50-124)||(29255426-29255500)
chr6 (176-217)||(1450531-1450572)
chr6 (137-206)||(9380249-9380318)
chr6 (40-125)||(31296846-31296931)
chr6 (170-206)||(29744483-29744519)
chr6 (81-132)||(6957217-6957268)
chr6 (62-113)||(27097633-27097684)
chr6 (172-207)||(31297069-31297104)
chr6 (128-190)||(6957358-6957420)
chr6 (165-207)||(20845408-20845449)
chr6 (171-217)||(34185489-34185535)
chr6 (170-211)||(606452-606493)
chr6 (170-207)||(14174876-14174913)
chr6 (170-207)||(14179412-14179449)
chr6 (37-126)||(23128641-23128730)
chr6 (34-78)||(7976203-7976247)
chr6 (175-211)||(14731030-14731066)
chr6 (50-113)||(22571510-22571574)
chr6 (61-125)||(30776710-30776774)
[»] chr1 (56 HSPs)
chr1 (129-207)||(48750405-48750483)
chr1 (40-125)||(24582979-24583063)
chr1 (37-113)||(47132928-47133004)
chr1 (172-223)||(19061160-19061211)
chr1 (128-207)||(36775504-36775583)
chr1 (9-125)||(41994428-41994540)
chr1 (40-125)||(49626942-49627026)
chr1 (140-211)||(31692257-31692328)
chr1 (19-125)||(16262872-16262974)
chr1 (40-125)||(44543301-44543385)
chr1 (36-125)||(44915663-44915752)
chr1 (40-126)||(19060938-19061023)
chr1 (154-207)||(16162074-16162127)
chr1 (53-125)||(36775689-36775761)
chr1 (144-207)||(40163235-40163298)
chr1 (170-217)||(44915889-44915936)
chr1 (50-125)||(48750223-48750298)
chr1 (137-208)||(50616468-50616539)
chr1 (137-208)||(50624295-50624366)
chr1 (128-202)||(13075455-13075529)
chr1 (50-124)||(16161876-16161950)
chr1 (129-207)||(41994684-41994762)
chr1 (40-125)||(3228297-3228382)
chr1 (40-125)||(23291621-23291706)
chr1 (170-207)||(39888432-39888469)
chr1 (175-211)||(11121380-11121416)
chr1 (175-211)||(13969314-13969350)
chr1 (81-121)||(25564067-25564107)
chr1 (175-211)||(30853621-30853657)
chr1 (37-125)||(31919013-31919101)
chr1 (42-126)||(45789571-45789655)
chr1 (167-207)||(50377570-50377610)
chr1 (9-113)||(6217818-6217918)
chr1 (172-211)||(24583201-24583240)
chr1 (172-211)||(24583397-24583436)
chr1 (40-111)||(34528758-34528829)
chr1 (50-125)||(37720128-37720203)
chr1 (45-112)||(43412407-43412474)
chr1 (135-217)||(45789766-45789846)
chr1 (172-207)||(47133154-47133189)
chr1 (37-115)||(27456565-27456643)
chr1 (136-205)||(25564225-25564294)
chr1 (170-207)||(26535586-26535623)
chr1 (36-121)||(27580111-27580196)
chr1 (138-226)||(34479643-34479729)
chr1 (174-211)||(38646987-38647024)
chr1 (174-211)||(49648660-49648697)
chr1 (166-211)||(49652231-49652275)
chr1 (37-125)||(1742306-1742394)
chr1 (175-211)||(8893696-8893732)
chr1 (175-211)||(12967407-12967443)
chr1 (37-125)||(14872665-14872752)
chr1 (37-125)||(21947597-21947685)
chr1 (175-211)||(26771510-26771546)
chr1 (175-211)||(34659315-34659351)
chr1 (175-211)||(46589552-46589588)
[»] scaffold0039 (3 HSPs)
scaffold0039 (144-217)||(93338-93411)
scaffold0039 (39-125)||(93131-93217)
scaffold0039 (174-207)||(53206-53239)
[»] scaffold0042 (2 HSPs)
scaffold0042 (38-126)||(92474-92562)
scaffold0042 (176-217)||(92292-92333)
[»] scaffold0888 (2 HSPs)
scaffold0888 (128-207)||(1472-1551)
scaffold0888 (49-123)||(1659-1733)
[»] scaffold0009 (1 HSPs)
scaffold0009 (36-113)||(58079-58156)
[»] scaffold0136 (1 HSPs)
scaffold0136 (39-130)||(38077-38168)
[»] scaffold0347 (1 HSPs)
scaffold0347 (19-113)||(6038-6128)
[»] scaffold0445 (1 HSPs)
scaffold0445 (37-125)||(1366-1454)
[»] scaffold0015 (1 HSPs)
scaffold0015 (135-207)||(3839-3911)
[»] scaffold0121 (1 HSPs)
scaffold0121 (170-217)||(31069-31116)
[»] scaffold0157 (1 HSPs)
scaffold0157 (166-217)||(26831-26882)
[»] scaffold0012 (1 HSPs)
scaffold0012 (177-211)||(245035-245069)
[»] scaffold0209 (1 HSPs)
scaffold0209 (165-206)||(30290-30330)
[»] scaffold0146 (1 HSPs)
scaffold0146 (174-211)||(16104-16141)
[»] scaffold0064 (2 HSPs)
scaffold0064 (56-113)||(19065-19122)
scaffold0064 (129-193)||(18891-18955)
[»] scaffold0634 (1 HSPs)
scaffold0634 (37-125)||(8534-8622)


Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 24610272 - 24609931
Alignment:
Q  2 gtcgtcttcttctgcaacgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaa 101  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24610272 gtcgtctttttctgcaacgttgtttgatttcgcatgcgtcttgttgcggtgttcgtttagttcatattaaaatatcagtttcagtcgatcacagattcaa 24610173  T
Q  102 tcaatgatttgggcttcaacgttgttgattcaacctttacatttttagcgatattgatcatat----tattatatctgatgtattatatcaatttgaatg 197  Q
    ||||||||||||| |||||||||||||||||||||||||  |||| || |||||| |||||||    ||||||| |||||||||||||||||||||||||    
T  24610172 tcaatgatttgggtttcaacgttgttgattcaacctttatgttttcagtgatatt-atcatattatatattatacctgatgtattatatcaatttgaatg 24610074  T
Q  198 aatgaatatcatttcattttatttttgtc-nnnnnnntattaactttgcactaacacaataataaacattgctagtgacgtgttagtttgctttaatctt 296  Q
    ||||||||     ||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24610073 aatgaata-----tcattttatttttgtcaaaaaaaatattaactttgcactaacacaataataaacattgctagtgacgtgttagtttgctttaatctt 24609979  T
Q  297 ttttaacatatcaatcagcagttagaaattcttagaattaattataat 344  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24609978 ttttaacatatcaatcaccagttagaaattcttagaattaattataat 24609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 11344027 - 11344106
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| | ||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||    
T  11344027 gattcatcatttacgtttttagcgatgttgatcatgttattgtatctgatgtattatatcaatttgaataaatgaatatc 11344106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 48930925 - 48931004
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||| ||| |||||||||||||||||||| ||||| | ||||||||||| ||||||||| ||||||||||||||    
T  48930925 gattcaacctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttaaatgaatgaatatc 48931004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 35133165 - 35133244
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||| ||| |||||| ||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  35133165 gattcaccctatacgtttttaacgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 35133244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 38880642 - 38880568
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttggg 114  Q
    ||||||||| |||||||||| |||| |||||||| ||||| ||||||| |||||| |||||||||||||||||||    
T  38880642 tcttgttgcggtgttcgtttggttcttattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttggg 38880568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 28476444 - 28476520
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaat 204  Q
    |||||| | ||||| |||||||| ||||||||||| ||||||| ||||||||||| ||||||| |||||||||||||    
T  28476444 gattcaccatttacgtttttagcaatattgatcatgttattatctctgatgtattctatcaatatgaatgaatgaat 28476520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 41554191 - 41554103
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||||   |||||||||| |||||||||||||||||| |||||||| |||||| ||||| | |||||||||| | |||||||||    
T  41554191 gcgtcttgttatggtgttcgtttggttcatattgaaatatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttg 41554103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 5348658 - 5348571
Alignment:
Q  38 cgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||| |||| |||||||||| |||| |||||||| |||| ||||| || || |||||||||||||||||||||||| || ||||||    
T  5348658 cgtcttattgcggtgttcgtttggttcctattgaaagatcaatttcaatcaattacagattcaatcaatgatttgggcgtcgacgttg 5348571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 25068275 - 25068354
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| | ||||| ||||||||||||||||| || ||||| | ||||||||||| |||||||||||| |||||||||||    
T  25068275 gattcaccatttacgtttttagcgatattgatgatgttattgtttctgatgtattctatcaatttgaaagaatgaatatc 25068354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 38880479 - 38880422
Alignment:
Q  146 ttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaa 203  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||||||| ||||||    
T  38880479 ttagcgatattgatcatgttattatatctgatgtattctaacaatttgaataaatgaa 38880422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 24069461 - 24069373
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||| ||||||| ||||||||||  |||||||||||||||||| |||  || ||||||| ||||||||||||||||  | |||||||||    
T  24069461 gcgtattgttgcggtgttcgtttgattcatattgaaatatcagcttcgatcaatcacaggttcaatcaatgatttgaacgtcaacgttg 24069373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 24350895 - 24350818
Alignment:
Q  46 tgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||||| |||| |||||||| ||||| ||||  | |||||| |||||||||||||||||||| |||||||||    
T  24350895 tgcagtgttcgtttggttcgtattgaaagatcagcttca--caatcacaaattcaatcaatgatttgggcgtcaacgttg 24350818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 41553501 - 41553413
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||||   |||||||||| ||||||||||||| |||| |||||||| |||||| ||||| | |||||||||| | |||||||||    
T  41553501 gcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttg 41553413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 41553846 - 41553758
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||||   |||||||||| ||||||||||||| |||| |||||||| |||||| ||||| | |||||||||| | |||||||||    
T  41553846 gcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatattcagttaatgatttggacgtcaacgttg 41553758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 3876125 - 3876042
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||| ||||||  |||||||||||| ||||| ||| ||||||||| |||||||||||| ||| |||||||||||    
T  3876125 gattcatcatttacgtttttaatgatattgatcatgttattgtatttgatgtattctatcaatttgaacgaaagaatatcattt 3876042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 28476264 - 28476339
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| ||||| ||||| | |||||| ||||| |||||||||||||| |||||||||    
T  28476264 gtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttg 28476339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 35132984 - 35133059
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| ||||  ||||| | |||||| |||||||||||||||||||| |||||||||    
T  35132984 gtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttg 35133059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 24770272 - 24770358
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||| || ||||||||||| ||| |||||||| ||| |  |||||| |||||| |||||| ||||||||||||| |||||||||    
T  24770272 gtcttgtcgcggtgttcgtttatttcttattgaaagatcggcatcagtcaatcacaaattcaaccaatgatttgggcgtcaacgttg 24770358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 5000072 - 5000003
Alignment:
Q  61 gttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgttgat 130  Q
    ||||||||| |||||||| |||||||| || ||| ||||||||||| |||||| ||||||||||| ||||    
T  5000072 gttcatattaaaatatcaatttcagtcaattacaaattcaatcaattatttggacttcaacgttgctgat 5000003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 22742983 - 22743056
Alignment:
Q  52 gttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||| |||| |||||||| ||||| ||||| | |||||| ||||||||||||||||| || |||||||||    
T  22742983 gttcgtttggttcgtattgaaagatcagcttcagccaatcacaaattcaatcaatgatttgagcgtcaacgttg 22743056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 37837526 - 37837437
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| || ||||||||||||||| |||||||| |||    |||||| || ||| |||||| ||||||||||||| |||||||||    
T  37837526 tgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttg 37837437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 3394485 - 3394574
Alignment:
Q  20 gttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgattt 111  Q
    ||||||||||||||| ||  |||| |||| ||||| |||||| ||||||||||  ||||  ||||||| |||||| ||||||||||||||||    
T  3394485 gttgtttgatttcgtgtg--tcttcttgcggtgtttgtttagatcatattgaatgatcaacttcagtcaatcacatattcaatcaatgattt 3394574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 4999887 - 4999823
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| |||| ||||| || ||||| |||||||| |||||||| ||||||||||||||||||||    
T  4999887 tttttatcgatgttgatgatgttattgtatctgatatattatattaatttgaatgaatgaatatc 4999823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 5775230 - 5775301
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgat 109  Q
    |||||||||||||||||| |||| |||||||| |||| ||||| ||||||| |||||| | ||||||||||||    
T  5775230 gcgtcttgttgcagtgtt-gtttggttcatatcgaaagatcagattcagtcaatcacataatcaatcaatgat 5775301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 25255452 - 25255521
Alignment:
Q  135 cctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    ||||||| |||||||||||||||| ||| ||||||||| |||||||   | |||||||||||||||||||||    
T  25255452 cctttacgtttttagcgatattgaacatgttattatatttgatgta--ctctcaatttgaatgaatgaatat 25255521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 31481944 - 31481892
Alignment:
Q  155 ttgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||    
T  31481944 ttgatcatgttattgtatatgatgtattctatcaatttgaatgaatgaatatc 31481892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 1769225 - 1769170
Alignment:
Q  57 tttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttg 112  Q
    ||||||||||||||||| || |  ||||||| ||||||||||||||||||||||||    
T  1769225 tttagttcatattgaaaaattatcttcagtcaatcacagattcaatcaatgatttg 1769170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 3222945 - 3222906
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3222945 tctgatgtattatatcaatttaaatgaatgaatatcattt 3222906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 35665197 - 35665127
Alignment:
Q  42 ttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttg 112  Q
    ||||||| || |||||||  ||||||| |||| ||||  |||||||||||| |||||||||||||||||||    
T  35665197 ttgttgcggtattcgtttgattcatatcgaaagatcaacttcagtcgatcagagattcaatcaatgatttg 35665127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 38439934 - 38440004
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||||| ||| ||||||||  |||| |||| ||| |||||||||||||| |||||||| |||||    
T  38439934 tttacatttttagtgatgttgatcatgatattgtatcagatatattatatcaatttaaatgaatgcatatc 38440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 11654043 - 11654096
Alignment:
Q  153 tattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    ||||||| || ||||| ||| ||||||||| |||||||||||||||||||||||    
T  11654043 tattgatgatgttattgtatttgatgtattctatcaatttgaatgaatgaatat 11654096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 24069264 - 24069195
Alignment:
Q  138 ttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||| ||||||||||| ||||| || ||||| ||||||| ||||| |||| |||||||| ||||||||||    
T  24069264 ttacgtttttagcgatgttgattatgttattttatctgaggtattctatcgatttgaatcaatgaatatc 24069195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 46822607 - 46822538
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    ||||| ||| ||||||| |||||||| ||||| ||||| ||| ||| |||||||||||||||||| ||||    
T  46822607 tttacgtttgtagcgatgttgatcatgttattgtatctaatgcattctatcaatttgaatgaatggatat 46822538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 1749200 - 1749140
Alignment:
Q  51 tgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgattt 111  Q
    ||||||||| |||| |||||||| ||||| ||||| | |||||| ||||||||||||||||    
T  1749200 tgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgattt 1749140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 11343834 - 11343922
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||| ||||| |||| ||||||||||||| || |  ||||||| || ||| ||| ||| |||||||||| | |||||||||    
T  11343834 gcgtcttgttgcggtgtttgtttggttcatattgaaagattaaattcagtcaattacaaatttaattaatgatttggacgtcaacgttg 11343922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 9977273 - 9977186
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgtt 124  Q
    ||||||||| || ||| || |||||||| |||||||| |||   ||||||| || ||| |||||| ||||||||||||| ||||||||    
T  9977273 gcgtcttgtcgcggtgctcatttagttcctattgaaagatcgacttcagtcaattacaaattcaaacaatgatttgggcgtcaacgtt 9977186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 37890200 - 37890165
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcatt 210  Q
    |||||| |||||||||||||||||||||||||||||    
T  37890200 gatgtactatatcaatttgaatgaatgaatatcatt 37890165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 40741822 - 40741865
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||    
T  40741822 tgatgtactatatcaatttgaatgaattaatatcattttatttt 40741865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 42978647 - 42978722
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||||||||| |||||||| |||    |||||| || ||| |||||| ||||||||||||| |||||||||    
T  42978647 gtgttcgtttagttcttattgaaagatcgacatcagtcaataacaaattcaaccaatgatttgggcgtcaacgttg 42978722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 46700072 - 46700147
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||||||||| ||||||||||||    |||||| |  ||| |||||||||||||||||||| ||| |||||    
T  46700072 gtgttcgtttagttcctattgaaatatcgacatcagtcaactacaaattcaatcaatgatttgggcatcagcgttg 46700147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 2407850 - 2407896
Alignment:
Q  171 atctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||||| ||||||||| |||||||||||||| ||| |||||    
T  2407850 atctgatgtattctatcaatttaaatgaatgaatatcttttaatttt 2407896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 206
Target Start/End: Complemental strand, 8169309 - 8169279
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatat 206  Q
    |||||||||||||||||||||||||||||||    
T  8169309 atgtattatatcaatttgaatgaatgaatat 8169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 25287033 - 25286983
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||||||| | ||||||||||||||||| |||||| ||| |||||    
T  25287033 ttatatctgatgtactctatcaatttgaatgaataaatatcgttttatttt 25286983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 26017377 - 26017332
Alignment:
Q  165 tattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||    
T  26017377 tattatatc-gatgtactctatcaatttgaatgaatgaatatcattt 26017332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 3224472 - 3224403
Alignment:
Q  42 ttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgattt 111  Q
    |||||||  ||||||||| ||||||||||||  ||||  ||||||| ||||| |||||||| ||||||||    
T  3224472 ttgttgcgatgttcgtttggttcatattgaaggatcaacttcagtcaatcacggattcaattaatgattt 3224403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 10574789 - 10574826
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  10574789 tgatgtactctatcaatttgaatgaatgaatatcattt 10574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 14733778 - 14733741
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  14733778 tgatgtatcatatcaatttgaatgaatgaatgtcattt 14733741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 22087343 - 22087432
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgttg 128  Q
    |||||||||| ||||| ||||  | | |||||||| ||||  ||||||| || ||| ||||||||||||| |||||  ||||||||||||    
T  22087343 gtcttgttgctgtgtttgtttgatacctattgaaagatcaacttcagtcaattacaaattcaatcaatgacttgggtgtcaacgttgttg 22087432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 30992542 - 30992498
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||    
T  30992542 attatatc-gatgtactctatcaatttgaatgaatgaatatcattt 30992498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 38798804 - 38798889
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaac 121  Q
    ||||| |||| |||||||| ||||| ||| |||||||| ||| |  |||||| || ||| |||||| ||||||||||||| |||||    
T  38798804 tgcgttttgtcgcagtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaac 38798889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 46821619 - 46821546
Alignment:
Q  134 acctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||| |||||| |||| |||||||| |||||  || |||| |||| ||| ||||| ||||||||||||||    
T  46821619 acctttacgtttttaacgatgttgatcatgttattgcatatgatatattctattaatttaaatgaatgaatatc 46821546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 5792820 - 5792908
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||  ||||||||||||||||| |||||||| |||    |||||| || |||  || |||||||||||||| | |||||||||    
T  5792820 gcgtcttgtcacagtgttcgtttagttcctattgaaagatcgacatcagtcaattacaagttaaatcaatgatttggacgtcaacgttg 5792908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 32312925 - 32312961
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  32312925 gatgtactctatcaatttgaatgaatgaatatcattt 32312961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 34893511 - 34893547
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  34893511 gatgtactctatcaatttgaatgaatgaatatcattt 34893547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 35261553 - 35261589
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcatt 210  Q
    ||||||| | |||||||||||||||||||||||||||    
T  35261553 tgatgtactctatcaatttgaatgaatgaatatcatt 35261589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 39328857 - 39328769
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||| |||| || ||||| ||||| ||| |||||||| ||| |  |||||| || ||| |||||| ||||||||||||| |||||||||    
T  39328857 gcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttg 39328769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 121
Target Start/End: Complemental strand, 45349866 - 45349782
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaac 121  Q
    ||||||||| || ||||||||||||||| |||||||| ||  |  |||||| || ||| |||||| ||||||||| ||| |||||    
T  45349866 gcgtcttgtcgcggtgttcgtttagttcctattgaaagattggcatcagtcaattacaaattcaagcaatgattttggcgtcaac 45349782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 14585895 - 14585979
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttc 212  Q
    |||||| ||| ||| |||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  14585895 gattcaccctatacgtttttagcgatattgatcatgttattatctctgatgtattctatcaatttgaatgaatgaatatcctttc 14585979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 8443576 - 8443488
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||||||||||||||||| |||||  |||||| ||||  ||||||| |||||| |||||||||||||||||| | |||||||||    
T  8443576 gcgtcttgttgcagtgttcgtttggttcaatttgaaagatcaacttcagtcaatcacatattcaatcaatgatttggacatcaacgttg 8443488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 21237814 - 21237890
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||||||||||||||||| ||||||||||||| | |||||||| || ||| || ||||||||||||||||||    
T  21237814 gcgtcttgttgcagtgttcgtttggttcatattgaaagaccagtttcaatcaatcccatattcaatcaatgatttgg 21237890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 29617339 - 29617251
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||| |||||||||| |||| |||||||| | ||  ||||||| ||||||||||||||||||||||||| | |||||||||    
T  29617339 gcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttg 29617251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 5333452 - 5333542
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    ||||||||||| | |||||||||| |||| |||||||| ||||  ||||||| |||||| ||||||||||| |||||||| ||||||||||    
T  5333452 tgcgtcttgttccggtgttcgtttggttcctattgaaagatcaacttcagtcaatcacatattcaatcaattatttgggcgtcaacgttgt 5333542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 15344336 - 15344420
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||  ||||||| ||||||||||||||||||||||||| | |||||||||    
T  15344336 tcttgttgcggtgttcgttg-gttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttg 15344420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 15433401 - 15433485
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||  ||||||| ||||||||||||||||||||||||| | |||||||||    
T  15433401 tcttgttgcggtgttcgttg-gttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttg 15433485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 15524705 - 15524789
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||  ||||||| ||||||||||||||||||||||||| | |||||||||    
T  15524705 tcttgttgcggtgttcgttg-gttcatattgaaagatcaagttcagtcaatcacagattcaatcaatgatttggacgtcaacgttg 15524789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 18890555 - 18890491
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||| ||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  18890555 tttttagcgatattaatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 18890491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 8868035 - 8868102
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaat 204  Q
    ||||| |||||||| || |||||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  8868035 tttacgtttttagcaatgttgatcatgttattgtatctgatgtattctatcaatttgaatgaatgaat 8868102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 18890751 - 18890676
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| ||||| ||||| | |||||| |||||||||||||||||||| |||||||||    
T  18890751 gtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttg 18890676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 42046439 - 42046518
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| |  |||||||||| |||| |||||||||||||||||||    
T  42046439 gattcaccctatacgtttttagcgatattgatcatgttattgtcactgatgtattctatcgatttgaatgaatgaatatc 42046518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 19443919 - 19443846
Alignment:
Q  144 ttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||| |||| |||| ||| ||||||||||||||||| | |||||||||||||||||||||||| ||| |||||    
T  19443919 ttttaacgatgttgaacatgttattatatctgatgtactctatcaatttgaatgaatgaatatcgttttatttt 19443846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 26469210 - 26469122
Alignment:
Q  38 cgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    |||||||||| ||||||||||| |||| |||||||| ||||  || |||  ||| || |||||||||||||||||||| ||||||||||    
T  26469210 cgtcttgttgtagtgttcgttttgttcctattgaaagatcaagtttagttaatcgcatattcaatcaatgatttgggcgtcaacgttgt 26469122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 34610069 - 34610133
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||| ||||| || || ||||| ||||||||||||||||||||||||||||||| ||||||    
T  34610069 tttttagcaatattaatgatgttattgtatctgatgtattatatcaatttgaatgaataaatatc 34610133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 8981187 - 8981274
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgtt 124  Q
    |||||||||||| ||||||||||  || ||||||||| |||||  |||||| ||||||||||||||  ||||||||| | ||||||||    
T  8981187 gcgtcttgttgcggtgttcgtttgtttgatattgaaagatcagcgtcagtcaatcacagattcaattgatgatttggacgtcaacgtt 8981274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 26469021 - 26468938
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||| |||||||| || || ||||| ||||||||| |||||||||| || ||||||||| ||||||||||||||    
T  26469021 gattcaccatttacgtttttagcaatgttaatcatgttattatatatgatgtattacattaatttgaataaatgaatatcattt 26468938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 43833867 - 43833788
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| | ||||| |||||||||||||||||||| ||||| | | ||||||||| ||||||||||| || |||||||||    
T  43833867 gattcaccatttacttttttagcgatattgatcatgttattgtctttgatgtattctatcaatttgattggatgaatatc 43833788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 471229 - 471143
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| ||| |||||| |||| |||||||| ||||  |||| || |||| ||||||||||||||||||| || |||||||||    
T  471229 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 471143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 14585715 - 14585789
Alignment:
Q  51 tgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||| |||||||||||||| ||||| | |||||| ||||||||| |||||||| | |||||||||    
T  14585715 tgttcgtttggttcgtattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttg 14585789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 14916250 - 14916176
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||||||| |||||||||| ||||||||||||| | ||  |||| || |||| ||||||||||||||||||||    
T  14916250 gtcttgttgcggtgttcgtttggttcatattgaaagaccaacttcaatcaatcagagattcaatcaatgatttgg 14916176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 41896735 - 41896812
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    |||||| ||| ||| |||||||| ||||||||||| |||||   ||||||||||| |||||||||||||||||||||||    
T  41896735 gattcaccctatacgtttttagcaatattgatcatgttattgc-tctgatgtattctatcaatttgaatgaatgaatat 41896812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 1236758 - 1236674
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||  ||||||| |||||| |||||||||||||| ||| | |||||||||    
T  1236758 tcttgttgcggtgttcgttg-gttcatattgaaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttg 1236674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 1239458 - 1239374
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||  ||||||| |||||| |||||||||||||| ||| | |||||||||    
T  1239458 tcttgttgcggtgttcgttg-gttcatattgaaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttg 1239374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 34680707 - 34680666
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  34680707 atgtattatatcaatttgaatgaatgaatatcattttatttt 34680666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 18846325 - 18846261
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||| ||| |||||||  ||||| |||||||||||||||||||| || ||||||||||||||    
T  18846325 tttttagtgatgttgatcaagttattgtatctgatgtattatatcaaattaaatgaatgaatatc 18846261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 33214736 - 33214648
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |  |||||| |||||||| |||||||| ||| |  |||||| || ||| |||||| |||||||||||||||||||||||    
T  33214736 gcgtcttgtcgtggtgttcttttagttcctattgaaagatcggcgtcagtcaattacaaattcaaccaatgatttgggcttcaacgttg 33214648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 8054527 - 8054482
Alignment:
Q  165 tattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  8054527 tattatatc-gatgtattctatcaatttgaatgaatgaatatcattt 8054482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 8826238 - 8826323
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||||| || | |||||||||||||||||  |||| |  ||||  ||||||||||||||||||||| |||||||||    
T  8826238 gtcttgttgcggtgttctttga-ttcatattgaaatatcaacttcaatgaatcatcgattcaatcaatgatttgggcatcaacgttg 8826323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 33347583 - 33347498
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||||| ||| | || |||||||| ||||  ||||||| ||||||||||||||||||||||| ||| || ||||||    
T  33347583 gtcttgttgcggtgttcattt-gatcctattgaaagatcaacttcagtcaatcacagattcaatcaatgatttaggcgtcgacgttg 33347498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 42046263 - 42046333
Alignment:
Q  55 cgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||| |||| |||||||| ||||| ||||| | |||||| |||||||||||||||||||| |||| ||||    
T  42046263 cgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttg 42046333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 15344560 - 15344605
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||||    
T  15344560 tctgatgtattctatcaatttgaatgaataaatatcattttatttt 15344605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 15433625 - 15433670
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||||    
T  15433625 tctgatgtattctatcaatttgaatgaataaatatcattttatttt 15433670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 15524929 - 15524974
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||| ||||||||||||||||| |||||||||| |||||    
T  15524929 tctgatgtattctatcaatttgaatgaataaatatcattttatttt 15524974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 40618913 - 40618876
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  40618913 tatctgatgtattctatcaatttgaatgaatgaatatc 40618876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 470995 - 470951
Alignment:
Q  162 tattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    ||||||| ||||||||||||| ||||||||| |||||||||||||    
T  470995 tattattgtatctgatgtattctatcaatttaaatgaatgaatat 470951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 3673687 - 3673727
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  3673687 ttatatctagtgtattatatcaatttgaatgaatgaatatc 3673727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 1236536 - 1236497
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  1236536 tctgatgtattctatcgatttgaatgaatgaatatcattt 1236497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 12654326 - 12654369
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||||||| |||||||||||| |||||||||| |||||    
T  12654326 tgatgtattatatcgatttgaatgaataaatatcattttatttt 12654369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 16247064 - 16247017
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||||||  |||||||||||| |||||||||||||| |||||    
T  16247064 tatctgatgtattccatcaatttgaataaatgaatatcattttatttt 16247017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 27498206 - 27498159
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||| | ||||||||||||||||||||||| |||| |||||    
T  27498206 tatctgatgtactctatcaatttgaatgaatgaatattattttatttt 27498159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 39657491 - 39657566
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| || || ||||| | |||| | |||||||||||||||||| | |||||||||    
T  39657491 gtgttcgtttggttcgtattgaaagattagcttcagacaatcataaattcaatcaatgatttggacgtcaacgttg 39657566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 3240389 - 3240480
Alignment:
Q  18 acgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||||||||||||    |||| ||||||  ||||| |||| ||| ||||||||| ||| | ||||||| |||||| |||||||| |||||||||    
T  3240389 acgttgtttgatttc----gcgtgttgttgtggtgtttgtttggttaatattgaaagatcggcttcagtcaatcacatattcaatcgatgatttgg 3240480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 5457466 - 5457511
Alignment:
Q  165 tattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||    
T  5457466 tattatatc-gatgtactctatcaatttgaatgaatgaatatcattt 5457511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 11267286 - 11267324
Alignment:
Q  189 atttgaatgaatgaatatca-tttcattttatttttgtc 226  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  11267286 atttgaatgaatgaatatcattttcattttatttttgtc 11267324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 589069 - 589029
Alignment:
Q  165 tattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  589069 tattatatc-gatgtattttatcaatttgaatgaatgaatat 589029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 624853 - 624893
Alignment:
Q  165 tattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  624853 tattatatc-gatgtattttatcaatttgaatgaatgaatat 624893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 6314913 - 6314954
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||| |||||| | ||||||||||||||||||||||||||||    
T  6314913 tatccgatgtaatctatcaatttgaatgaatgaatatcattt 6314954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 9799722 - 9799685
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  9799722 tgatgtactctatcaatttgaatgaatgaatatcattt 9799685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 24419203 - 24419142
Alignment:
Q  65 atattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    ||||||||| ||||||||||||| | || | |||||||||||||||| | | ||||||||||    
T  24419203 atattgaaagatcagtttcagtcaaccaaatattcaatcaatgattttgacgtcaacgttgt 24419142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 27110531 - 27110494
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaa 73  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  27110531 tgcgtcttgtcgcagtgttcgtttagttcatgttgaaa 27110494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 28086652 - 28086615
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  28086652 tatctgatgtactatatcaatttgaataaatgaatatc 28086615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 30568157 - 30568120
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  30568157 tgatgtaatctatcaatttgaatgaatgaatatcattt 30568120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 5046793 - 5046853
Alignment:
Q  53 ttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||| |||| |||||||| ||||  ||||||| || ||||||||||||||| ||||||    
T  5046793 ttcgtttggttcctattgaaaaatcaaattcagtcaattacagattcaatcaataatttgg 5046853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 7579559 - 7579523
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  7579559 gatgtactctatcaatttgaatgaatgaatatcattt 7579523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 21238040 - 21238072
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatat 206  Q
    ||||||||| |||||||||||||||||||||||    
T  21238040 tgatgtattctatcaatttgaatgaatgaatat 21238072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 26469297 - 26469232
Alignment:
Q  9 tcttctgcaacgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatca 78  Q
    |||| ||||||||||||||| ||| |    ||||||||||||||||||||| |||| |||||||| ||||    
T  26469297 tcttgtgcaacgttgtttgacttcat----gtcttgttgcagtgttcgtttggttcctattgaaagatca 26469232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 28296819 - 28296783
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  28296819 gatgtactctatcaatttgaatgaatgaatatcattt 28296783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 31712784 - 31712748
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  31712784 gatgtactctatcaatttgaatgaatgaatatcattt 31712748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 31720711 - 31720643
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| |||||||||  || | |||||||  |||||||| ||||||||| | ||||||||||||||||    
T  31720711 tttttatcgatattgaatatgtcattatattcgatgtattttatcaatttaagtgaatgaatatcattt 31720643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 40211143 - 40211103
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||| | |||| |||||||||||||||||||    
T  40211143 ttatatctgatgtactctatcgatttgaatgaatgaatatc 40211103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 40490246 - 40490202
Alignment:
Q  179 tattatatcaatttgaatgaatgaatatcatttcattttattttt 223  Q
    |||| ||||||||||||||||| ||||||||||  ||||||||||    
T  40490246 tattgtatcaatttgaatgaataaatatcatttatttttattttt 40490202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 41684619 - 41684659
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||| | ||||||||| ||||||||||||||    
T  41684619 ttatatctgatgtactctatcaatttaaatgaatgaatatc 41684659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 9e-24; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 10929697 - 10929785
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||| |||||||||| |||||| |||||| ||||| ||||||| ||||||||||||||||||||||||| | |||||||||    
T  10929697 gcgtcttgttgcggtgttcgtttggttcatgttgaaaaatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttg 10929785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 10237090 - 10237011
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  10237090 gattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 10237011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 14955755 - 14955838
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| |||||| ||||||||||||||||||||| ||||| | ||| ||||||| ||||||||| ||||||||||||||||||    
T  14955755 gattcatcctttatatttttagcgatattgatcatgttattgtctcttatgtattctatcaatttaaatgaatgaatatcattt 14955838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 3309171 - 3309249
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | ||||||||||| |||||||||||||||||||||||    
T  3309171 gattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatat 3309249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 17249211 - 17249127
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| ||||| |||  ||||||||||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  17249211 tcttgttgcggtgtttgttg-gttcatattgaaagatcagtttcagtcaatcacagattcaatcaatgatttggacgtcaacgttg 17249127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 32448683 - 32448599
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| | |||||||||    
T  32448683 tcttgttgcggtgttcgttg-gttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttg 32448599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 19595758 - 19595694
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||| |||||||||    
T  19595758 tttttagcgatcttgatcatgttattgtatctgatatattatatcaatttgaatgcatgaatatc 19595694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 10237275 - 10237196
Alignment:
Q  46 tgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||||| |||| |||||||| ||||| ||||| | |||||| |||||||||||||||||| | |||||||||    
T  10237275 tgcagtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttg 10237196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 12554247 - 12554172
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttggg 114  Q
    |||| ||||| ||||||||||  |||||||||||||||||  ||||||| || |||||||||||||||||||||||    
T  12554247 gtctagttgcggtgttcgtttgattcatattgaaatatcaacttcagtcaattacagattcaatcaatgatttggg 12554172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 14416381 - 14416464
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||| || |||||||| |||| ||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  14416381 gattcaccatttacgttgttagcgatgttgaacatgttattgtatctgatgtattctatcaatttgaatgaataaatatcattt 14416464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 29574691 - 29574620
Alignment:
Q  42 ttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||||||| ||||  |||||||||||| || || ||||||| |||||||||||||||||||||||||    
T  29574691 ttgttgcagtgtttgtttgattcatattgaaagattagcttcagtcaatcacagattcaatcaatgatttgg 29574620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 30400090 - 30400015
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||||||||| |||||||| ||||  ||||||| || ||| |||||||||||||||||||| |||||||||    
T  30400090 gtgttcgtttagttcctattgaaagatcaacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttg 30400015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 17151458 - 17151544
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    ||||||| | ||||||||||  ||| |||||||| |||| |||||||| || |||||||||||||||||||||||| || |||||||    
T  17151458 tcttgttacggtgttcgtttgattcctattgaaagatcaatttcagtcaattacagattcaatcaatgatttgggcgtcgacgttgt 17151544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 24461474 - 24461551
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||| |||||||| |||||||||| ||||||||||||| ||||  ||||||| | ||||||||||||| |||||||||    
T  24461474 tgcgccttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaaccacagattcaatcgatgatttgg 24461551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 23933684 - 23933600
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgtt 124  Q
    ||||||||| |||||||||| |||| ||||||||  |||  ||||||| |||||||||||||||||| |||||| | ||||||||    
T  23933684 tcttgttgcggtgttcgtttggttcttattgaaagttcaacttcagtcaatcacagattcaatcaattatttggacgtcaacgtt 23933600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 16376216 - 16376283
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaat 204  Q
    ||||||||| || | ||||  ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  16376216 tttacatttgtaacaatatcaatcatattattatatctgatgtattttattaatttgaatgaatgaat 16376283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 6358746 - 6358676
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||| ||||||  |||||||||||  ||||| |||||||||||||  |||||||||||||||||||||||    
T  6358746 tttacgtttttaatgatattgatcaagttattgtatctgatgtattccatcaatttgaatgaatgaatatc 6358676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 33760260 - 33760186
Alignment:
Q  38 cgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttg 112  Q
    ||||||||||||||||||||||  |||||||||||| ||||  ||||||| || | ||| |||||||||||||||    
T  33760260 cgtcttgttgcagtgttcgtttgattcatattgaaagatcaacttcagtcaattatagactcaatcaatgatttg 33760186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 3460527 - 3460584
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaat 200  Q
    |||||||||||||||||||| ||||| | |||||| |||| |||||||||||||||||    
T  3460527 tttttagcgatattgatcatgttattgtctctgatatattctatcaatttgaatgaat 3460584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 31128845 - 31128760
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||| || ||||||||||||||| |||||||| |||  | |||||| || ||| |||||||||||||||| ||| |||||||||    
T  31128845 tcttgtcgcggtgttcgtttagttcctattgaaaaatcgatatcagtcaattacaaattcaatcaatgatttaggcgtcaacgttg 31128760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 37416745 - 37416818
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||||| | |||||| || ||||||||||||||||||  |  |||| |||||||||||||||||||||||||    
T  37416745 tcttgttgtaatgttcggttggttcatattgaaatatcaactcgagtcaatcacagattcaatcaatgatttgg 37416818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 3465576 - 3465640
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||| ||||||||||| ||||| | |||||| |||| ||||||||| ||||||||||||||    
T  3465576 tttttagcaatattgatcatgttattgtctctgatatattctatcaatttaaatgaatgaatatc 3465640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 12647161 - 12647101
Alignment:
Q  53 ttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||| ||||||||||||| ||||| ||||||| ||||||||||||||| || ||||||    
T  12647161 ttcgttttgttcatattgaaagatcagcttcagtcaatcacagattcaatcgatcatttgg 12647101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 3308990 - 3309065
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||  |||||||||||||  ||||| | |||||| |||||||||||||||||||| | |||||||    
T  3308990 gtgttcgtttggtttgtattgaaatatcaacttcagacaatcacaaattcaatcaatgatttgggcgttaacgttg 3309065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 14955574 - 14955649
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| ||||||||||||||||||  |||||   |||| | ||||||||||||||||| || |||||||||    
T  14955574 gtgttcgtttggttcatattgaaatatcatcttcagataatcataaattcaatcaatgatttgagcgtcaacgttg 14955649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 32448458 - 32448419
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  32448458 tctgatgtattctatcaatttgaatgaatgaatatcattt 32448419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 12554039 - 12553965
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||| || ||||  || ||||| |||||||| || | |||||||||||||||||||||||||||| |||||    
T  12554039 tttttagcaatgttgaatatgttattgtatctgatatactctatcaatttgaatgaatgaatatcattttatttt 12553965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 18107616 - 18107550
Alignment:
Q  136 ctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatga 202  Q
    |||||| ||||||| |||| ||| ||| ||||||||| ||||||| | |||||||||||||||||||    
T  18107616 ctttacgtttttagtgataatgaacatgttattatatgtgatgtactctatcaatttgaatgaatga 18107550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 19598074 - 19598148
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||| ||||| || || |||||||| ||||||||||| || |||| ||||||||| |||||||| |||||||||    
T  19598074 tttacgttttttgcaatgttgatcatgttattatatcttatatattctatcaattttaatgaatggatatcattt 19598148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 25509134 - 25509048
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||| || |||||||||||||||  ||||||| ||||   |||||| || ||| |||||||||||||| ||||| |||||||||    
T  25509134 gtcttgtcgcggtgttcgtttagttcccattgaaagatcaacatcagtcaattacaaattcaatcaatgatctgggcgtcaacgttg 25509048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 34128558 - 34128480
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    |||||| ||||||||||||| |||||||||| |||||||||  || |||| || | || |||||||||||||| |||||    
T  34128558 gattcaccctttacattttttgcgatattgaacatattattggatttgatttaatttaacaatttgaatgaataaatat 34128480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 6436642 - 6436715
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||| | |||||||| | ||||||| ||||| ||||| ||||||| |||| | ||||||||||||||||||    
T  6436642 tcttgttacggtgttcgtctggttcataatgaaagatcagcttcagtcaatcaaatattcaatcaatgatttgg 6436715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 17248989 - 17248944
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||    
T  17248989 tctgatgtattttatcgatttgaatgaatgaatatcattttatttt 17248944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 32519026 - 32519096
Alignment:
Q  139 tacatttttagcgatattgatcatattat--tatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||| | ||||||||||||||  | | ||||||||||| ||| ||||| ||||||||||||||    
T  32519026 tacatttttagcaaaattgatcatattatattgtctctgatgtattctattaatttaaatgaatgaatatc 32519096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 37994542 - 37994577
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||| ||||||||||||||||||||||||    
T  37994542 tctgatgtattctatcaatttgaatgaatgaatatc 37994577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 4264504 - 4264578
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgattt 111  Q
    ||||||| |||| |||||| ||| |||| |||||||| ||||  ||||||| || ||||||| ||||||||||||    
T  4264504 gcgtcttattgcggtgttcatttggttcttattgaaagatcaacttcagtcaattacagatttaatcaatgattt 4264578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 5754698 - 5754739
Alignment:
Q  165 tattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  5754698 tattatatc-gatgtattctatcaatttgaatgaatgaatatc 5754739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 30399875 - 30399825
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||||||| |  |||||||||||| |||||||||||||| |||||    
T  30399875 ttatatctgatgtactcgatcaatttgaataaatgaatatcattttatttt 30399825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 37994314 - 37994368
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcaca 94  Q
    |||||||||||||||| |||  |||||||||||| ||||| ||||||| ||||||    
T  37994314 tcttgttgcagtgttcatttgattcatattgaaaaatcagcttcagtcaatcaca 37994368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 1415814 - 1415855
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  1415814 tatctgatgtaatctatcgatttgaatgaatgaatatcattt 1415855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 1421932 - 1421973
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  1421932 tatctgatgtactttatcgatttgaatgaatgaatatcattt 1421973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 11550377 - 11550340
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  11550377 tgatgtactctatcaatttgaatgaatgaatatcattt 11550340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 11931268 - 11931312
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||    
T  11931268 attatatc-gatgtactttatcaatttgaatgaatgaatatcattt 11931312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 19595969 - 19595888
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaa 120  Q
    ||||||||||  |||| ||||||||| |||||||| ||||| || | || |||| | ||||||| |||||||||||| ||||    
T  19595969 gtcttgttgcgatgtttgtttagttcttattgaaagatcagctttaatcaatcataaattcaataaatgatttgggcgtcaa 19595888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 24461702 - 24461743
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||| |||||||||||||||||||||||| ||| |||||    
T  24461702 atgtattctatcaatttgaatgaatgaatatcgttttatttt 24461743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 28534019 - 28533946
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||| ||||||||||  ||| |||||||| |  || |||| || |||||||||||||| ||||||||||    
T  28534019 tcttgttgcggtgttcgtttgattcctattgaaagacaagcttcactcaatcacagattcaataaatgatttgg 28533946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 30923296 - 30923259
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  30923296 tgatgtactctatcaatttgaatgaatgaatatcattt 30923259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 32092205 - 32092140
Alignment:
Q  142 atttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||| ||| |||||||||||||| ||||| |||| ||| ||| ||||||||| || ||||||    
T  32092205 atttttagtgatgttgatcatattattgtatcttatgtgttagatcgatttgaatgcattaatatc 32092140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 32197573 - 32197536
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  32197573 tgatgtattatatcaatttgaatgattaaatatcattt 32197536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 37884056 - 37884089
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||| ||||||||||||||||||||||||||    
T  37884056 tgatgtactatatcaatttgaatgaatgaatatc 37884089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 41694684 - 41694741
Alignment:
Q  68 ttgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||| ||||| ||||| | || ||| |||||||||||||||||||| |||||||||    
T  41694684 ttgaaagatcagcttcagccaattacatattcaatcaatgatttgggcatcaacgttg 41694741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 1415589 - 1415677
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||| |||| || ||||| ||||| ||| |||||||| ||| |  |||||| || ||| |||||| ||||||||||||| |||||||||    
T  1415589 gcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttg 1415677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 4878444 - 4878408
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  4878444 gatgtactctatcaatttgaatgaatgaatatcattt 4878408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 12366272 - 12366308
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  12366272 gatgtactctatcaatttgaatgaatgaatatcattt 12366308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 15920278 - 15920314
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  15920278 gatgtactctatcaatttgaatgaatgaatatcattt 15920314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 18089108 - 18089076
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||||||||||||||||||||||||||    
T  18089108 gatgtactatatcaatttgaatgaatgaatatc 18089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 18141191 - 18141155
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  18141191 gatgtactctatcaatttgaatgaatgaatatcattt 18141155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 19028982 - 19028894
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||  | |||||| |||||||| |||||||| |||   ||||||| |  ||| ||||||||||||||||| || |||||||||    
T  19028982 gcgtcttgtctcggtgttcatttagttcctattgaaagatcgacttcagtcaagtacaaattcaatcaatgatttgagcgtcaacgttg 19028894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 26491705 - 26491737
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||| ||||||||||||||||||||||||    
T  26491705 gatgtattctatcaatttgaatgaatgaatatc 26491737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 28871662 - 28871585
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| |||||| ||||||||| || ||||  || ||||| ||||||||||| | |  |||||||||||||||||||||    
T  28871662 gattcaccctttatatttttagcaatgttgaaaatgttattgtatctgatgtactct--caatttgaatgaatgaatatc 28871585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 33332462 - 33332384
Alignment:
Q  129 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||| ||||||| |||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||| |||||    
T  33332462 attcaccctttacgtttttagcgatattgatcatattattgtctctgatgtattctatcaatttgaatgaatggatatc 33332384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 52944352 - 52944441
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||||||| ||||||||||  |||||||||||| ||||| ||||||| ||||||||||||||| ||||||||| | |||||||||    
T  52944352 tgcgtcttgttgcggtgttcgtttgtttcatattgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacgttg 52944441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 6155093 - 6155010
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| ||||||  ||||||||||| |||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  6155093 gattcaccctttatgtttttagcgatgttgatcattttattgtatctaatgtattctatcaatttgaatgaatgaatatcattt 6155010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 36161955 - 36162036
Alignment:
Q  136 ctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||| |||||| |||| |||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  36161955 ctttacgtttttaacgatgttgatcatgttattgtatttgatgtattctatcaatttgaatgaatgaatatcattttatttt 36162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 12199761 - 12199685
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttg 112  Q
    ||||||||||||| |||||||||||||||||||||||||||||  |||||||  | |||||||||||||| ||||||    
T  12199761 tgcgtcttgttgcggtgttcgtttagttcatattgaaatatcaacttcagtcagttacagattcaatcaaagatttg 12199685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 43853688 - 43853768
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||||||||| ||||  || ||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||    
T  43853688 tttacatttttagcgatgttgagtatgttattgtatctgatgtattctatcaatttgaatgaatgaatatcgttttatttt 43853768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 7393435 - 7393502
Alignment:
Q  129 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaat 196  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||||||| |||| |||||||||||||    
T  7393435 attcaccctttacatttttagcgatattgatcataatattgtatctgatatattctatcaatttgaat 7393502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 2069662 - 2069559
Alignment:
Q  18 acgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggctt 117  Q
    |||||||||||||||| ||    |||||||| || ||| ||| |||||||||||||||||||||| |||| |||| ||||||||||||| |||||||  |    
T  2069662 acgttgtttgatttcgcat----cttgttgcggtattcatttggttcatattgaaatatcagttttagtcaatcatagattcaatcaattatttgggtgt 2069567  T
Q  118 caacgttg 125  Q
    ||||||||    
T  2069566 caacgttg 2069559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 27652179 - 27652268
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||| ||| ||| ||||||||||||| |||||| ||||| | | ||||||||| |||||||||||||||||||||||| ||| |||||    
T  27652179 gattcatcctatacgtttttagcgatatcgatcatgttattgtctttgatgtattctatcaatttgaatgaatgaatatcctttgatttt 27652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 18936033 - 18936097
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||||||||||||  |||| | ||||||||||| ||||||||||||||||||||||||    
T  18936033 tttttagcgatattgatcatgctattgtctctgatgtattctatcaatttgaatgaatgaatatc 18936097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 36194959 - 36195023
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||| |||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||    
T  36194959 tttttagtgatattgatcgtgttattatgtctgatgtattctatcaatttgaatgaatgaatatc 36195023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 52933814 - 52933734
Alignment:
Q  136 ctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcattt 216  Q
    |||||||||||||||||| ||| |||| ||||| ||||| ||||||| ||||||||||||| |||||||||| ||| ||||    
T  52933814 ctttacatttttagcgatgttggtcatgttattgtatctaatgtattttatcaatttgaataaatgaatatcgttttattt 52933734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 1621384 - 1621305
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||| ||| |||||||| ||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||||||    
T  1621384 gattcaccctatacgtttttagcaatattgatcatgttattgtctctgatgtattctataaatttgaatgaatgaatatc 1621305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 36161758 - 36161829
Alignment:
Q  42 ttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||| |||||||||| |||||||| |||| || |||||||||| |||||| ||||||||||||||||||    
T  36161758 ttgttgcggtgttcgttttgttcatatcgaaagattagtttcagtcaatcacatattcaatcaatgatttgg 36161829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 31891372 - 31891266
Alignment:
Q  19 cgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttc 118  Q
    ||||||||||||||| || |||  |  ||| |||||||||| |||| |||||||| ||||||||||| | |||||| |||||| | ||||||||||| ||    
T  31891372 cgttgtttgatttcgcatccgttgttgtgcggtgttcgtttggttcgtattgaaaaatcagtttcagacaatcacaaattcaaaccatgatttgggcgtc 31891273  T
Q  119 aacgttg 125  Q
    |||||||    
T  31891272 aacgttg 31891266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 10496376 - 10496461
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaac 121  Q
    |||||||||| |||||||||||||||||| |||||||| ||| |  |||||| || ||| |||||| ||||||||||||| |||||    
T  10496376 tgcgtcttgtcgcagtgttcgtttagttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaac 10496461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 52060993 - 52060912
Alignment:
Q  34 tatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggc 115  Q
    |||| |||||||||  ||||||||||| ||| |||||||| ||||  ||||||| || ||||||||||||||||||||||||    
T  52060993 tatgtgtcttgttgaggtgttcgtttaattcctattgaaagatcaacttcagtcaattacagattcaatcaatgatttgggc 52060912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 6155324 - 6155219
Alignment:
Q  2 gtcgtcttcttctgcaacgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaa 101  Q
    |||||| |||| |||  ||||||||||||||||    || |||| |||||||||||||  |||||||||||| ||||||||||||| ||||||  |||||    
T  6155324 gtcgtcatcttgtgcgtcgttgtttgatttcgt----gttttgtcgcagtgttcgtttgattcatattgaaagatcagtttcagtcaatcacatgttcaa 6155229  T
Q  102 tcaatgattt 111  Q
    || |||||||    
T  6155228 tcgatgattt 6155219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 9643433 - 9643505
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttg 112  Q
    |||||||||||||||||||| ||||||||| ||| ||||  ||||||| |||||| ||||||| |||||||||    
T  9643433 tcttgttgcagtgttcgtttggttcatattaaaagatcaacttcagtcaatcacatattcaattaatgatttg 9643505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 37465724 - 37465788
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| |||| |||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  37465724 tttttaacgatgttgatcatgttattgtatctgatgtattctatcaatttaaatgaatgaatatc 37465788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 22300877 - 22300967
Alignment:
Q  19 cgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||||||||||||    |||| |||||| ||||| |||||| |||| |||||| ||||| || |||| ||||||||||||||| |||||||||    
T  22300877 cgttgtttgatttcg----cgtcctgttgcggtgtttgtttagctcatcttgaaagatcagctttagtcaatcacagattcaatcgatgatttgg 22300967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 42032396 - 42032323
Alignment:
Q  134 acctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||  |||||| |||| ||||| || |||||| || ||||||||| ||||||||||||||||||||||||    
T  42032396 acctttatgtttttaacgatgttgattatgttattacatatgatgtattctatcaatttgaatgaatgaatatc 42032323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 51888302 - 51888204
Alignment:
Q  9 tcttctgcaacgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatga 108  Q
    |||| ||| |||||||||||||||| ||    |||||||| |||||||||| ||||||||||||| ||||  |||| || |||||| ||| |||||||||    
T  51888302 tcttatgcgacgttgtttgatttcgcat----cttgttgcggtgttcgtttggttcatattgaaagatcaacttcaatcaatcacaaatttaatcaatga 51888207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 28857444 - 28857520
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||| ||||| ||||||||||  |||||||||||| ||||| ||||||| |||||| |||||||  |||||||||    
T  28857444 gcgtctagttgcggtgttcgtttgtttcatattgaaagatcagcttcagtcaatcacatattcaattgatgatttgg 28857520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 48351067 - 48350999
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaat 196  Q
    |||||| ||||||| || |||||||| |||||||| | ||| ||||||||||||| |||||||||||||    
T  48351067 gattcatcctttacgttattagcgatgttgatcatgtcattgtatctgatgtattctatcaatttgaat 48350999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 27651999 - 27652074
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| ||||| || || | |||||| |||||||||||||||||||  |||||||||    
T  27651999 gtgttcgtttggttcgtattgaaagatcagctttagacaatcacaaattcaatcaatgatttgggtatcaacgttg 27652074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 33332623 - 33332548
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||  |||||||| ||||  ||||| | ||||||||||||||||||||||||| | |||||||||    
T  33332623 gtgttcgtttcgtttttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttg 33332548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 9048708 - 9048794
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||||||||| |||  | |||||| || || ||||||  |||||| ||||||||||||||||| || |||||||||    
T  9048708 gtcttgttgcggtgttcgtttggtttcttttgaaagataagcttcagttaatcacaaattcaatcaatgatttgagcgtcaacgttg 9048794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 31891159 - 31891073
Alignment:
Q  129 attcaacctttacatttttagcgatattgatc----atattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||| ||| ||| ||||||||||||||||||    || || || | ||||||||||| ||||||||||||||||| ||||||||||    
T  31891159 attcaccctatacgtttttagcgatattgatcgatcatgtttttgtctctgatgtattctatcaatttgaatgaataaatatcattt 31891073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 46716612 - 46716568
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  46716612 attatatc-gatgtactatatcaatttgaatgaatgaatatcattt 46716568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 8670531 - 8670615
Alignment:
Q  41 cttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||| || ||||||||||| ||| |||||||| ||| |  |||||| || ||| |||||| ||||||||||||| |||||||||    
T  8670531 cttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttg 8670615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 21662479 - 21662567
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| || || |||||||||||| |||||||| ||||   |||||| || ||| || |||||||||||||| || |||||||||    
T  21662479 gcgtcttgtcgcggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttg 21662567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 21671243 - 21671331
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| || || |||||||||||| |||||||| ||||   |||||| || ||| || |||||||||||||| || |||||||||    
T  21671243 gcgtcttgtcgcggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgttg 21671331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 28857672 - 28857704
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||||||||||||||||||||||    
T  28857672 gatgtattatatcaatttgaatgaatgaatatc 28857704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 36204446 - 36204358
Alignment:
Q  42 ttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtc-----gatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||| |||||| ||| ||||||||||||| ||||| |||||||      |||||| |||||||||||||||||| | |||||||||    
T  36204446 ttgttgcggtgttcatttggttcatattgaaaaatcagcttcagtcaatcacatcacaaattcaatcaatgatttggacgtcaacgttg 36204358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 12493595 - 12493646
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||| ||||||| | ||||||||| |||||||||||||||||| |||||    
T  12493595 attatatttgatgtactctatcaattttaatgaatgaatatcattttatttt 12493646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 18048924 - 18048991
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatc 103  Q
    |||| |||||||| ||||||||||  |||||||||||| || || ||||||| |||| ||||||||||    
T  18048924 tgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcatagattcaatc 18048991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 22038883 - 22038795
Alignment:
Q  19 cgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgattt 111  Q
    |||||||||||||||    ||||||||||  ||| |||||| ||||||||||||| |||   ||||||| |||||| ||||||| ||||||||    
T  22038883 cgttgtttgatttcg----cgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatcacatattcaataaatgattt 22038795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 211
Target Start/End: Complemental strand, 35395500 - 35395465
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||||||||||||||||| ||||||||||    
T  35395500 atgtattatatcaatttgaatgaataaatatcattt 35395465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 47320434 - 47320391
Alignment:
Q  82 tcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||| ||||||||||||||||||||||||| | |||||||||    
T  47320434 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttg 47320391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 52933985 - 52933934
Alignment:
Q  62 ttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||||||||| ||||| |||| ||||||| ||||||||||||| ||||||    
T  52933985 ttcatattgaaagatcagcttcaatcgatcaaagattcaatcaataatttgg 52933934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 36194764 - 36194826
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttg 112  Q
    |||||||||| |||| |||||||| ||||| ||||  | |||||| |||||||||||||||||    
T  36194764 gtgttcgtttggttcgtattgaaagatcagcttcaaacaatcacaaattcaatcaatgatttg 36194826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 1621558 - 1621493
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggc 115  Q
    |||||||||| |||| |||||||| ||||| ||||  | |||| | ||||||||||||||||||||    
T  1621558 gtgttcgtttggttcgtattgaaagatcagcttcaaacaatcataaattcaatcaatgatttgggc 1621493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 9549828 - 9549872
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||    
T  9549828 attatatc-gatgtactatattaatttgaatgaatgaatatcattt 9549872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 9714148 - 9714228
Alignment:
Q  130 ttcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||| ||||||| |||||| |||| |||||||  ||||| | | | ||||||| |||||||||||||||| |||||||||||    
T  9714148 ttcaccctttacgtttttaacgat-ttgatcaggttattgtcttttatgtattctatcaatttgaatgaacgaatatcattt 9714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 13634382 - 13634423
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  13634382 tatctgatgtactctatcgatttgaatgaatgaatatcattt 13634423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 14542230 - 14542190
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  14542230 attatatc-gatgtattctatcaatttgaatgaatgaatatc 14542190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 44374993 - 44374949
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||    
T  44374993 attatatc-gatgtactctatcaatttgaatgaatgaatatcattt 44374949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 51888052 - 51888007
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||| |||| ||||||||||||||||||||| |||||| |||||    
T  51888052 tctgatatattctatcaatttgaatgaatgaatgtcattttatttt 51888007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 211
Target Start/End: Complemental strand, 52555454 - 52555425
Alignment:
Q  182 tatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||||||||||||||||||||||    
T  52555454 tatatcaatttgaatgaatgaatatcattt 52555425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 56040714 - 56040625
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||||||| ||||||||| ||||| || |||    |||||| || ||| |||||| |||||||||||||  ||||||||    
T  56040714 tgcgtcttgtcgcagtgtttgtttagttcctattggaagatctacatcagtcaattacaaattcaaccaatgatttgggcggcaacgttg 56040625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 10258963 - 10258875
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||  || ||||||||||||||||| |||||| |||    | |||| || ||| ||||||||||||||||||||  ||||||||    
T  10258963 gcgtcttgacgcggtgttcgtttagttcatgttgaaagatcgacattagtcaattacaaattcaatcaatgatttgggcgccaacgttg 10258875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 24100558 - 24100594
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  24100558 gatgtactctatcaatttgaatgaatgaatatcattt 24100594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 26633738 - 26633662
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||| |||||||| ||| ||||| |||||||| |||    ||||||||| ||| |||||| |||||||||||    
T  26633738 gcgtcttgtcgcagtgtttgttcagttcctattgaaagatctacatcagtcgattacaaattcaaccaatgatttgg 26633662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 38545862 - 38545830
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatatca 208  Q
    ||||| |||||||||||||||||||||||||||    
T  38545862 atgtactatatcaatttgaatgaatgaatatca 38545830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 38943853 - 38943817
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  38943853 gatgtactctatcaatttgaatgaatgaatatcattt 38943817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 52979008 - 52979048
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||| || ||||||||||||||| |||||||    
T  52979008 ttatatctgatgtactagatcaatttgaatgaaagaatatc 52979048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 56236527 - 56236491
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  56236527 gatgtactctatcaatttgaatgaatgaatatcattt 56236491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 8088275 - 8088191
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||||||||||  ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| | |||||||||    
T  8088275 tcttgttgcagtgttcgttg-gttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttg 8088191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 2979179 - 2979100
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||| |||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||||| ||||||||||    
T  2979179 gattcaccctatacatttttagcgatattgatcatgttattgtttctgatgtattctatcaatttgaataaatgaatatc 2979100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 35920854 - 35920786
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||||| ||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  35920854 tttttagcgacattgatcatgtgattgtatctgatgtattatatcaatttgattgaatgaatatcattt 35920786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 14211442 - 14211521
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||| ||| ||||||||||||||||||||  |||| | | ||||||||||||||||||||||||||||||||||    
T  14211442 gattcaccctatacgtttttagcgatattgatcatgctattgtctatgatgtattatatcaatttgaatgaatgaatatc 14211521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 19103340 - 19103262
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||| |||||    
T  19103340 gattcatcctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaataaatat 19103262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 28540779 - 28540690
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | | ||||||||| ||||||||| |||||||||||||| |||| ||||    
T  28540779 gattcaccctatacgtttttagcgatattgatcatgttattgtctttgatgtattttatcaatttaaatgaatgaatatcctttcttttt 28540690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 16758781 - 16758843
Alignment:
Q  155 ttgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||| |||||    
T  16758781 ttgatcatattattatatcttatgtattctatcaatttaaatgaaagaatatcattttatttt 16758843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 24874744 - 24874822
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    |||||| ||||||| ||||||| |||||||||||||||||  ||| |||||||| |||||||||| ||| |||||||||    
T  24874744 gattcatcctttacgtttttagggatattgatcatattatcctatatgatgtatcatatcaattttaataaatgaatat 24874822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 39567500 - 39567562
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaata 205  Q
    ||||||| |||||||||||| ||||| | | ||||||||||||||||||||||||||||||||    
T  39567500 tttttagtgatattgatcatgttattgtctttgatgtattatatcaatttgaatgaatgaata 39567562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 16758561 - 16758636
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttg 112  Q
    |||| ||||| | |||||||||| ||||||||||||| ||| || |||||| |||| |||||||||||||||||||    
T  16758561 gcgttttgttacggtgttcgtttggttcatattgaaaaatctgtgtcagtcaatcatagattcaatcaatgatttg 16758636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 28540960 - 28540885
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| || || ||||| | |||||| |||||||||||||||||||| |||||||||    
T  28540960 gtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttg 28540885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 41630523 - 41630611
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||  | ||||||||||||||| |||| ||| |||   ||||||| || ||| |||||||||||||||||||| |||||||||    
T  41630523 gcgtcttgtcacggtgttcgtttagttcctattaaaagatcgacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttg 41630611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 2979360 - 2979285
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||| ||| ||||  ||||| | |||||| |||||||||||||||||||| |||||||||    
T  2979360 gtgttcgtttggttcgtattaaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttg 2979285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 14211261 - 14211336
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| ||||| ||||| | |||||| || ||||||||||||||| | |||||||||    
T  14211261 gtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaatgcaatcaatgatttggacgtcaacgttg 14211336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 19121127 - 19121210
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| ||||||| |||| || ||| |||  ||| ||||| ||||||||||| | ||||||||||||||||||||||| ||||    
T  19121127 gattcaccctttacgttttcagagatgttggacatgttattgtatctgatgtagtttatcaatttgaatgaatgaatataattt 19121210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 35921078 - 35920975
Alignment:
Q  18 acgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggctt 117  Q
    ||||||||||||||||    ||||||||||| |||||| |||  ||| |||| ||| ||||  |||| || ||||||||||||||||||||||||  | |    
T  35921078 acgttgtttgatttcg----cgtcttgttgcggtgttcatttgtttcctattaaaagatcaaattcaatcaatcacagattcaatcaatgatttgaacgt 35920983  T
Q  118 caacgttg 125  Q
    ||||||||    
T  35920982 caacgttg 35920975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 15710947 - 15710984
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  15710947 tgatgtattctatcaatttgaatgaatgaatatcattt 15710984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 31391817 - 31391732
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||| |||||||| ||||||||  |||||||| ||| |  |||||| || ||| |||||| ||||||||||||| |||||||||    
T  31391817 tcttgtcgcagtgtttgtttagtttttattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttg 31391732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 36057147 - 36057106
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  36057147 atgtattatatcgatttgaatgaatgaatatcattttatttt 36057106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 38111013 - 38110940
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttg 112  Q
    |||||||||||||||| |||| |||| ||||||||||||| ||| |||| |||| | | ||| |||||||||||    
T  38111013 gtcttgttgcagtgtttgtttggttcctattgaaatatcaatttaagtcaatcataaactcagtcaatgatttg 38110940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 8088054 - 8088014
Alignment:
Q  171 atctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| ||| ||||||||||||||||||||||||||||    
T  8088054 atctgatgcattctatcaatttgaatgaatgaatatcattt 8088014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 10722795 - 10722871
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    ||||||||||||||| |||||||| |||   |||||||  | | | |||||||||||||||||||| ||||||||||    
T  10722795 gtgttcgtttagttcctattgaaagatcgacttcagtcatttaaaaattcaatcaatgatttgggcgtcaacgttgt 10722871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 211
Target Start/End: Complemental strand, 28423745 - 28423710
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||| ||||||||||||||||||||||||||||||    
T  28423745 atgtactatatcaatttgaatgaatgaatatcattt 28423710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 33486279 - 33486236
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcatttcatttta 218  Q
    |||||||| |||||||||||||||||||||||| ||| ||||||    
T  33486279 gatgtattctatcaatttgaatgaatgaatatcttttaatttta 33486236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 10332615 - 10332541
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgattt 111  Q
    |||||||||||||||||| ||||  |||||||||||| || ||  |||||| |||||| |||| ||| |||||||    
T  10332615 gcgtcttgttgcagtgtttgtttgattcatattgaaagattaggctcagtcaatcacatattcgatcgatgattt 10332541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 12628222 - 12628188
Alignment:
Q  183 atatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||||||||||||||||||||| |||||    
T  12628222 atatcaatttgaatgaatgaatatcatttaatttt 12628188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 5378698 - 5378742
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||    
T  5378698 attatatc-gatgtactctatcaatttgaatgaatgaatatcattt 5378742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 6216922 - 6217007
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||| |||||||| ||||||||  |||||||| |||    ||| || || ||| |||||||||||||||||||| |||||||||    
T  6216922 tcttgtcgcagtgtttgtttagtttctattgaaagatctacatcaatcaattacaaattcaatcaatgatttgggcgtcaacgttg 6217007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 8984827 - 8984794
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||| ||||||||||||||||||||||||    
T  8984827 tgatgtattctatcaatttgaatgaatgaatatc 8984794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 26905342 - 26905309
Alignment:
Q  178 gtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||||||| ||||||||||||||||||    
T  26905342 gtattatatcaattttaatgaatgaatatcattt 26905309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 211
Target Start/End: Original strand, 34866843 - 34866872
Alignment:
Q  182 tatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||||||||||||||||||||||    
T  34866843 tatatcaatttgaatgaatgaatatcattt 34866872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 14726528 - 14726440
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||  | ||||| ||||| ||| |||||||| ||| |  |||||| |||||| |||||| ||||||||||||  |||||||||    
T  14726528 gcgtcttgtcacggtgttagtttatttcttattgaaagatcggcatcagtcaatcacaaattcaaccaatgatttgggtgtcaacgttg 14726440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 17218127 - 17218163
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  17218127 gatgtactctatcaatttgaatgaatgaatatcattt 17218163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 24229629 - 24229589
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||| | |||| |||||||||||||||||||    
T  24229629 ttatatctgatgtactctatcgatttgaatgaatgaatatc 24229589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 25980179 - 25980267
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| || ||||| ||||||||| |||||||| ||||   |||||| |  ||| |||||| ||||||||||||| |||| ||||    
T  25980179 gcgtcttgtcgcggtgtttgtttagttcctattgaaagatcaacatcagtcaactacaaattcaaccaatgatttgggcgtcaaagttg 25980267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 40775165 - 40775201
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  40775165 gatgtactctatcaatttgaatgaatgaatatcattt 40775201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 41358430 - 41358473
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatcatt 210  Q
    |||||||| |||||| | |||||||||||||||||||||||||||    
T  41358430 attatatc-gatgtactctatcaatttgaatgaatgaatatcatt 41358473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 16235656 - 16235724
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||    
T  16235656 tttttagcgatattgatcatattattgtctctgatgtattctatcaatttgaatgaataaatatcattt 16235724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 35175401 - 35175513
Alignment:
Q  9 tcttctgcaacgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatga 108  Q
    |||| |||| |||||||||||||| |    |||||||||| |||||||||| ||| ||||||||| ||||| ||||||| |||||| |||||||||||||    
T  35175401 tcttgtgcagcgttgtttgatttcat----gtcttgttgcggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaatcaatga 35175496  T
Q  109 tttgggcttcaacgttg 125  Q
    ||||| | |||||||||    
T  35175497 tttggacatcaacgttg 35175513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 53508437 - 53508520
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| ||||||  |||||||||||||||||||| ||||| ||||||||||||| |||||| || ||||||||||||||||||    
T  53508437 gattcaccctttatgtttttagcgatattgatcatgttattgtatctgatgtattctatcaaattaaatgaatgaatatcattt 53508520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 628986 - 628901
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    ||||||||| |||||||||  ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| | ||||||||||    
T  628986 tcttgttgcggtgttcgttg-gttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgt 628901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 41818432 - 41818509
Alignment:
Q  130 ttcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||| |||||| ||||||||||||||| || || ||||||| ||||||||||| ||||||||||||||||||||||||    
T  41818432 ttcaccctttatatttttagcgatattaatgatgttattatctctgatgtattctatcaatttgaatgaatgaatatc 41818509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 42460964 - 42461040
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaat 204  Q
    |||||| ||||||||||| |||||||||||||||| ||||| | ||||||||||| | |||||||||||||||||||    
T  42460964 gattcaccctttacatttatagcgatattgatcatgttattgtctctgatgtattctgtcaatttgaatgaatgaat 42461040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 21289687 - 21289608
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | ||||||| ||| ||||||||||||||||||||||||    
T  21289687 gattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgcattctatcaatttgaatgaatgaatatc 21289608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 4821827 - 4821904
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||| || |||| |||||| |||||||| |||||||||    
T  4821827 tgcgtcttgttgcggtgttcgtttggttcatattgaaagatcagcttgagtcaatcacatattcaatccatgatttgg 4821904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 14859514 - 14859599
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||| ||| ||||||||||||| ||||| |||| || |||||| |||||||||||||||||| | |||||||||    
T  14859514 tcttgttgcggtgttcatttggttcatattgaaagatcagcttcaatcaatcacatattcaatcaatgatttggacgtcaacgttg 14859599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 53807921 - 53807837
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||  ||||||| ||||||||||||||||||||||||| | |||||||||    
T  53807921 tcttgttgctgtgttcgttg-gttcatattgaaagatcaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttg 53807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 8914942 - 8915006
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||||||||| || ||||| | ||||||||||| ||||||||||||||||||||||||    
T  8914942 tttttagcgatattgatgatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 8915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 27706084 - 27706020
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||||| |||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  27706084 tttttagcgatatcgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 27706020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 51923957 - 51924021
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||||||||| ||||| | ||||||| ||| ||||||||||||||||||||||||    
T  51923957 tttttagcgatattgatcatgttattgtctctgatgcattctatcaatttgaatgaatgaatatc 51924021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 12947338 - 12947265
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||  |||||||||| ||||||||||||||||||  ||||||| |||| |||||||||| |||||||||    
T  12947338 tcttgttgtggtgttcgtttggttcatattgaaatatcaacttcagtcaatcatagattcaatcgatgatttgg 12947265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 29239365 - 29239453
Alignment:
Q  38 cgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    ||||||||||  |||||||||| |||| ||||| || ||||| ||||||| |||||||||| |||||||||||||| | || |||||||    
T  29239365 cgtcttgttgtggtgttcgtttggttcgtattggaagatcagcttcagtcaatcacagatttaatcaatgatttggacgtcgacgttgt 29239453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 7546649 - 7546724
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| ||||||||||| | |||||| ||||| ||||||||||| || |||||||||    
T  7546649 gtgttcgtttggttcgtattgaaagatcagtttcagacaatcacaaattcagtcaatgatttgagcgtcaacgttg 7546724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 8914746 - 8914821
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| || || ||||| | |||||| |||||||||||||||||||| |||||||||    
T  8914746 gtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttg 8914821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 27856380 - 27856451
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaa 199  Q
    |||||| | ||||| |||||||||||||||||||| ||||| | |||||||| || ||||||||||||||||    
T  27856380 gattcatcttttacgtttttagcgatattgatcatgttattgtgtctgatgtgttttatcaatttgaatgaa 27856451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 50194176 - 50194137
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50194176 tctgatgtattatatcaatttgaatgaatgaatatcattt 50194137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 53508252 - 53508323
Alignment:
Q  42 ttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||||||||||||||| |||| |||||||| ||||  | ||||  |||||||||||||||||||||||||    
T  53508252 ttgttgcagtgttcgtttggttcctattgaaagatcaaatccagttaatcacagattcaatcaatgatttgg 53508323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 38142741 - 38142814
Alignment:
Q  129 attcaacctttacatttttagcgatat--tgatcatattattatatctgatgtattatatcaatttgaatgaat 200  Q
    ||||| |||||||||||||||||||||  ||||||| ||| | ||||| ||||||| |||||||||||||||||    
T  38142741 attcaccctttacatttttagcgatatgctgatcattttactgtatctaatgtattctatcaatttgaatgaat 38142814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 21313070 - 21313143
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgt 123  Q
    ||||||||||||||  |||||||||||| || |||||| || ||| |||||||||||||||||| | |||||||    
T  21313070 gtgttcgtttagtttctattgaaatatcggtatcagtcaattacaaattcaatcaatgatttggacgtcaacgt 21313143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 33579900 - 33579989
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| || ||||||||||| |||||||||||| |||    |||||| || ||| |||||| ||||||||||||| |||||||||    
T  33579900 tgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttg 33579989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 3085160 - 3085092
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| ||  ||| ||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  3085160 tttttagcaatgatgaccatgttattgtatctgaagtattctatcaatttgaatgaatgaatatcattt 3085092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 7546846 - 7546910
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||||||||| | ||| | | ||||||||| ||||||||||||| ||||||||||    
T  7546846 tttttagcgatattgatcatgtcattgtctttgatgtattttatcaatttgaataaatgaatatc 7546910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 51487297 - 51487381
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtatt-----atatcaatttgaatgaatgaatatc 207  Q
    |||||| ||||||| |||||||||||||| ||||| ||||||| ||| |||||||      ||||||||||||||||||||||||    
T  51487297 gattcaccctttacgtttttagcgatattaatcatgttattatctctaatgtattctatcctatcaatttgaatgaatgaatatc 51487381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 14859734 - 14859777
Alignment:
Q  163 attattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  14859734 attattgtatctgatgtattctatcaatttgaatgaatgaatat 14859777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 16235464 - 16235535
Alignment:
Q  54 tcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||| |||| |||||||| || ||||| || | |||||| |||||||||||||||||||| |||||||||    
T  16235464 tcgtttggttcgtattgaaagattagttttagacaatcacaaattcaatcaatgatttgggcgtcaacgttg 16235535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 21289868 - 21289793
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| ||||| ||||| | |||||| |||||||||||||||| ||  |||||||||    
T  21289868 gtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgattttggtgtcaacgttg 21289793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 42460784 - 42460858
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||| ||||||||  ||||| | |||||| |||||||||||||||||||| |||||||||    
T  42460784 gtgttcgtttggttcgtattcaaatatcaacttcagac-atcacaaattcaatcaatgatttgggcgtcaacgttg 42460858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 44805052 - 44805127
Alignment:
Q  38 cgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||||| |||||||||| || |||||||||||||||   |||||| |||||| || |||||||| ||||||    
T  44805052 cgtcttgttgcggtgttcgtttggtgcatattgaaatatcatcctcagtcaatcacatatgcaatcaataatttgg 44805127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 50194389 - 50194326
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||||  |||||||||||| | ||| ||||||| ||||||||||||||| |||||||||    
T  50194389 gtgttcgtttgtttcatattgaaagaccagcttcagtcaatcacagattcaatcgatgatttgg 50194326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 51303697 - 51303622
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||  |||||||| ||||| ||| | | |||||| |||||||||||||||||||| |||||||||    
T  51303697 gtgttcgtttggtttgtattgaaagatcagcttctgacaatcacaaattcaatcaatgatttgggcgtcaacgttg 51303622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 51923761 - 51923836
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| ||||| ||||| | ||| || |||||||||||||||||| | |||||||||    
T  51923761 gtgttcgtttggttcgtattgaaagatcagcttcagacaatcgcaaattcaatcaatgatttggacgtcaacgttg 51923836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 52115881 - 52115807
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||| |||||||||||||  ||||| ||||| | || |||||||| ||||||||||||| ||||||||| ||||    
T  52115881 tttacgtttttagcgatatcaatcatgttattgtctccgatgtattctatcaatttgaataaatgaatattattt 52115807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 628762 - 628725
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  628762 tgatgtattctatcaatttgaatgaatgaatatcattt 628725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 4822057 - 4822098
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  4822057 atgtattttatcaatttgaatgaatgaatatcattttatttt 4822098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 7887497 - 7887424
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgt 123  Q
    ||||||||||||||| |||||||| ||||  ||||| | |||||| |||| || |||||||||||| |||||||    
T  7887497 gtgttcgtttagttcctattgaaagatcaacttcagacaatcacatattcgattaatgatttgggcgtcaacgt 7887424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 26716171 - 26716086
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| ||||||||||  ||  |||||||| || || ||||||| |||| | |||||||||||||||| ||| |||||||||    
T  26716171 tcttgttgcggtgttcgtttgatttctattgaaagattagcttcagtcaatcataaattcaatcaatgattttggcgtcaacgttg 26716086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 32881197 - 32881160
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  32881197 tgatgtattctatcaatttgaatgaatgaatatcattt 32881160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 6889946 - 6889874
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgattt 111  Q
    ||||||||||||| |||||||||||||| |||| |||||||||| | |  |||| | ||| ||||||||||||    
T  6889946 gtcttgttgcagtattcgtttagttcatgttgacatatcagttttaattcatcagatattaaatcaatgattt 6889874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 20464806 - 20464766
Alignment:
Q  171 atctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  20464806 atctgatgtactctatcaatttgaatgaatgaatatcattt 20464766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 29922078 - 29922166
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||| ||||   ||| ||||||||||||| ||||  ||||  | |||||| |||||||||||||||||| | |||||||||    
T  29922078 gcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttg 29922166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 29971231 - 29971319
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||| ||||   ||| ||||||||||||| ||||  ||||  | |||||| |||||||||||||||||| | |||||||||    
T  29971231 gcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttg 29971319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 35501479 - 35501443
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| ||||||||||||||||||||||||||||    
T  35501479 gatgtattttatcaatttgaatgaatgaatatcattt 35501443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 4396402 - 4396335
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatc 103  Q
    |||| |||||||| ||||||||||  |||||||||||| || || ||||||| |||| ||||||||||    
T  4396402 tgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcatagattcaatc 4396335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 25460815 - 25460776
Alignment:
Q  184 tatcaatttgaatgaatgaatatcatttcattttattttt 223  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  25460815 tatcaatttgaataaatgaatatcattttattttattttt 25460776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 35175653 - 35175696
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||    
T  35175653 tgatgtattctatcaatttgaatgaatgaatatcgttttatttt 35175696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 1650176 - 1650238
Alignment:
Q  144 ttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    ||||||||||||||| || |||||| ||| ||||||| | ||||||||  |||||||||||||    
T  1650176 ttttagcgatattgaacaaattattgtatatgatgtactctatcaattcaaatgaatgaatat 1650238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 32246468 - 32246546
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggc 115  Q
    ||||||||||||  |||||  || |||| |||||||| ||||  ||||||  |||||| ||||||||||||||||||||    
T  32246468 gcgtcttgttgcgctgttcacttggttcctattgaaagatcaacttcagttaatcacatattcaatcaatgatttgggc 32246546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 36910611 - 36910561
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||||||| | |||| ||||||||||||||||||| ||| |||||    
T  36910611 ttatatctgatgtactctatcgatttgaatgaatgaatatcgttttatttt 36910561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 53099812 - 53099898
Alignment:
Q  38 cgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgtt 124  Q
    |||||||| || || ||| |||||||| |||||||| |||||  | |||| || |||  ||||||||||||||||||| ||||||||    
T  53099812 cgtcttgtcgccgtattcatttagttcctattgaaagatcagcatgagtcaattacaagttcaatcaatgatttgggcgtcaacgtt 53099898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 9797376 - 9797339
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  9797376 tatctgatgtactatatcgatttgaatgaatgaatatc 9797339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 17238058 - 17238095
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  17238058 tgatgtaatatctcaatttgaatgaatgaatatcattt 17238095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 20252059 - 20252096
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  20252059 tgatgtactttatcaatttgaatgaatgaatatcattt 20252096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 20465038 - 20464949
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| || |||||| ||||  || |||||||| |||  |||||||| || ||| ||||||| |||||||||||| |||| ||||    
T  20465038 tgcgtcttgtcgcggtgttcatttaaatcctattgaaagatcgatttcagtcaattacaaattcaataaatgatttgggcgtcaatgttg 20464949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 21533651 - 21533610
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  21533651 tatctgatgtactctatcgatttgaatgaatgaatatcattt 21533610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 46304363 - 46304326
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  46304363 tatctgatgtactctatcaatttgaatgaatgaatatc 46304326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 47041890 - 47041849
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  47041890 tatctgatgtaatctatctatttgaatgaatgaatatcattt 47041849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 48650576 - 48650535
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  48650576 tatctgatgtactctatcgatttgaatgaatgaatatcattt 48650535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 55061754 - 55061807
Alignment:
Q  154 attgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||| ||||| ||||||||||||| |||||  ||||| |||||||||||    
T  55061754 attgatcatgttattgtatctgatgtattctatcaggttgaacgaatgaatatc 55061807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 7448759 - 7448719
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||| |||| | ||||||||||||||||||||||||    
T  7448759 ttatatctgttgtactctatcaatttgaatgaatgaatatc 7448719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 7456901 - 7456861
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||| |||| | ||||||||||||||||||||||||    
T  7456901 ttatatctgttgtactctatcaatttgaatgaatgaatatc 7456861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 7658422 - 7658454
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatatca 208  Q
    ||||| |||||||||||||||||||||||||||    
T  7658422 atgtactatatcaatttgaatgaatgaatatca 7658454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 10977647 - 10977679
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||||||||||||||||||||||||||    
T  10977647 gatgtactatatcaatttgaatgaatgaatatc 10977679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 207
Target Start/End: Original strand, 11225762 - 11225790
Alignment:
Q  179 tattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||||||||||||||||||    
T  11225762 tattatatcaatttgaatgaatgaatatc 11225790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 12149851 - 12149763
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| ||  |||||||||||||| |||||||| |||    ||||||  | ||| |||||| ||||||||||||| |||||||||    
T  12149851 gcgtcttgtcgcgatgttcgtttagttcctattgaaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttg 12149763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 25939206 - 25939170
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  25939206 gatgtactttatcaatttgaatgaatgaatatcattt 25939170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 26715980 - 26715936
Alignment:
Q  154 attgatcatattattatatctgatgtattatatcaatttgaatga 198  Q
    ||||||||||||||| || ||||||| || |||||||||||||||    
T  26715980 attgatcatattattgtaactgatgtgttctatcaatttgaatga 26715936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 33076689 - 33076725
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  33076689 gatgtactctatcaatttgaatgaatgaatatcattt 33076725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 36540407 - 36540371
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| |||||||||||||||||||| |||||||||    
T  36540407 gatgtactatatcaatttgaatgaatggatatcattt 36540371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 36623967 - 36623931
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  36623967 gatgtactctatcaatttgaatgaatgaatatcattt 36623931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 45424819 - 45424903
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaac 121  Q
    |||| ||||||| ||||| ||||||||| |||||||| |||    || ||| || ||| |||||||||||||||||||| |||||    
T  45424819 gcgtattgttgcggtgtttgtttagttcctattgaaaaatcgacatcggtcaattacaaattcaatcaatgatttgggcgtcaac 45424903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 48652153 - 48652117
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  48652153 gatgtactttatcaatttgaatgaatgaatatcattt 48652117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 136 - 211
Target Start/End: Original strand, 4370 - 4445
Alignment:
Q  136 ctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| ||||||||||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  4370 ctttacgtttttagcgatattgatgatgttattgtatctgatgtattttatcaatttgaatgaatgaatattattt 4445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 30776880 - 30776963
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| ||||||| |||||||||||||||||||| ||||| | ||||| ||||| ||||||| ||||||||||||||||||||    
T  30776880 gattcaccctttacgtttttagcgatattgatcatgttattgtctctgacgtattctatcaatatgaatgaatgaatatcattt 30776963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 8102943 - 8103022
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| | ||||| |||||||||||||||||||| ||||| | ||||||||||| ||||||| ||||||||||||||||    
T  8102943 gattcaccttttacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatatgaatgaatgaatatc 8103022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 30493525 - 30493643
Alignment:
Q  3 tcgtcttcttctgcaacgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaat 102  Q
    ||||| |||| |||| ||||||||||||||||||    ||||||   |||||||||| ||||||||||||| ||||  ||||||| ||| || |||||||    
T  30493525 tcgtcgtcttgtgcagcgttgtttgatttcgtat----cttgttctggtgttcgtttggttcatattgaaagatcaacttcagtcaatctcatattcaat 30493620  T
Q  103 caatgatttgggcttcaacgttg 125  Q
    ||||||||||| | |||||||||    
T  30493621 caatgatttggacgtcaacgttg 30493643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 14802055 - 14802123
Alignment:
Q  138 ttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    |||| |||||||||||||| ||||| ||||| | ||||||||||| |||||||||||||||||||||||    
T  14802055 ttacgtttttagcgatattaatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatat 14802123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 679325 - 679408
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| ||||||| |||||||| || ||||| || ||||| ||||||||||||| ||||||||||||||||| |||| |||||    
T  679325 gattcaccctttacgtttttagcaatgttgattatgttattgtatctgatgtattctatcaatttgaatgaataaataacattt 679408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 26588538 - 26588463
Alignment:
Q  38 cgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||||| |||||||||| ||||||||||||| ||||  ||||||| |||||| ||||||| ||||||||||    
T  26588538 cgtcttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtcaatcacacattcaattaatgatttgg 26588463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 1523621 - 1523699
Alignment:
Q  129 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||| ||||||| |||| ||| ||||||||||||||||| | ||||||||||| || |||| ||||||||||||||||    
T  1523621 attcatcctttacgttttcagcaatattgatcatattattttctctgatgtattctaccaatatgaatgaatgaatatc 1523699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 31851750 - 31851682
Alignment:
Q  143 tttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| |||||| | |||||  |||||||||||| ||||||||||||||||||||||| ||||    
T  31851750 tttttagcgatgttgatcttgttattgcatctgatgtattctatcaatttgaatgaatgaatattattt 31851682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 14801863 - 14801938
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| || || ||||| | |||||| |||||||||||||||||||| |||||||||    
T  14801863 gtgttcgtttggttcgtattgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttg 14801938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 34185775 - 34185684
Alignment:
Q  18 acgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||||||||    ||||||||||||  |||||| ||||||||||||||||| ||||  |||||  ||||||  ||||||||||||||||||    
T  34185775 acgttgtttgattt----tgcgtcttgttgtggtgttcttttagttcatattgaaagatcaacttcaggtgatcacgaattcaatcaatgatttgg 34185684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 22571628 - 22571685
Alignment:
Q  150 cgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||| |||||||  ||||||||||||||||||| |||||||||||||||| |||||||    
T  22571628 cgattttgatcaacttattatatctgatgtattctatcaatttgaatgaacgaatatc 22571685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 28981203 - 28981272
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgat 109  Q
    ||||||||  |||||||||| ||||||||| ||| || ||||| |||| |||||||||||||||||||||    
T  28981203 tcttgttgtggtgttcgtttggttcatattcaaagattagttttagtcaatcacagattcaatcaatgat 28981272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 546066 - 546142
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacaga-ttcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| ||||| ||||| | |||||| | ||||||||||||||||||| |||||||||    
T  546066 gtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaaattcaatcaatgatttgggcgtcaacgttg 546142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 546248 - 546320
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaat 200  Q
    |||||| ||| ||| |||||||||||||||||||| | ||| | |||||| |||| |||||||||||||||||    
T  546248 gattcatcctatacgtttttagcgatattgatcatgtcattgtgtctgatatattctatcaatttgaatgaat 546320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 679131 - 679207
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttg 112  Q
    ||||||||||||  || ||||||| |||  ||||||||  |||||||||||| |||||| |||||||||||||||||    
T  679131 tgcgtcttgttgtggtattcgtttggtttttattgaaaggtcagtttcagtcaatcacatattcaatcaatgatttg 679207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 10084998 - 10084942
Alignment:
Q  155 ttgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||| || ||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  10084998 ttgatgatgttattctatctgatgtattctatcaatttgaatgaatgaatattattt 10084942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 8102762 - 8102837
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||| |||| |||| |||||||| ||||| ||||| | |||||| ||||| |||||||||||||| |||||||||    
T  8102762 gtgtttgtttggttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttg 8102837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 30894623 - 30894710
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgtt 124  Q
    ||||||||  || |||||||||||||||||||||||| |||    |||||| || ||| |||||| ||||||||||||| ||||||||    
T  30894623 gcgtcttgccgcggtgttcgtttagttcatattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgtt 30894710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 32060124 - 32060171
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  32060124 tatctgatgtaatatatcaatttgaatgaatgaatatcgttttatttt 32060171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 528415 - 528329
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||||||| |||| |||| ||| |||| ||||| ||||||  || ||| ||| ||||||| |||||||| |||||||||    
T  528415 gtcttgttgcagtgtttgtttcgttcttatcgaaagatcagcttcagtaaattacatatttaatcaattatttgggcgtcaacgttg 528329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 1933757 - 1933671
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||| ||||| ||||| |||| ||||||||  ||| ||||  |||| || ||||||||||||||||||||||||| | |||||||||    
T  1933757 gtctggttgcggtgtttgtttggttcatatcaaaagatcaacttcaatcaatcacagattcaatcaatgatttggacgtcaacgttg 1933671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 29255500 - 29255426
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgtt 124  Q
    ||||||||||||||| |||||||| |||    |||||| || ||| |||||||||||||||||||| ||||||||    
T  29255500 gtgttcgtttagttcctattgaaagatcttcatcagtcaattacaaattcaatcaatgatttgggcgtcaacgtt 29255426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 1450572 - 1450531
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  1450572 atgtattatatcgatttgaatgaatgaatatcattttatttt 1450531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 9380249 - 9380318
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    |||||||||||| | || |||||||| ||||  ||| |||| |||||||||||||||||||| |||||||    
T  9380249 tttacatttttatcaatgttgatcatgttatagtatttgatatattatatcaatttgaatgagtgaatat 9380318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 31296846 - 31296931
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||||||| |||  |||||||||||| ||||||||||||| |||  | |||||||  ||||||| | | |||||||||    
T  31296846 tcttgttgcagtgttcatttgattcatattgaaaaatcagtttcagtcaatccaatattcaattgatgatttagacgtcaacgttg 31296931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 29744483 - 29744519
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29744483 tatctgatgtattctatcaatttgaatgaatgaatat 29744519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 6957217 - 6957268
Alignment:
Q  81 ttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgttgattc 132  Q
    ||||||| || |||||||||||||||||||| ||| |||||||||| |||||    
T  6957217 ttcagtcaataacagattcaatcaatgatttaggcatcaacgttgtagattc 6957268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 27097684 - 27097633
Alignment:
Q  62 ttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||||||||| || ||||| |||| |||| ||||||||||||||||||||    
T  27097684 ttcatattgaaagattagttttagtcaatcatagattcaatcaatgatttgg 27097633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 31297069 - 31297104
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31297069 tctgatgtattctatcaatttgaatgaatgaatatc 31297104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 6957358 - 6957420
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaat 190  Q
    |||||| ||||||| ||||||||||| |||| ||||||||| ||| ||||||| | |||||||    
T  6957358 gattcaccctttacgtttttagcgatgttgaacatattattgtatttgatgtactctatcaat 6957420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 20845408 - 20845449
Alignment:
Q  165 tattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||| |||||| ||||||||||||||||||||||||||    
T  20845408 tattatatc-gatgtactatatcaatttgaatgaatgaatatc 20845449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 34185535 - 34185489
Alignment:
Q  171 atctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||    
T  34185535 atctgatatactctatcaatttgaatgaatgaatatcattttatttt 34185489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 606452 - 606493
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  606452 tatctgatgtactctatcgatttgaatgaatgaatatcattt 606493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 14174913 - 14174876
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  14174913 tatctgatgtaatatatcgatttgaatgaatgaatatc 14174876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 14179449 - 14179412
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  14179449 tatctgatgtaatatatcgatttgaatgaatgaatatc 14179412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 23128641 - 23128730
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    |||| |||| |||||||| ||| ||||| |||||||| ||||   |||||| || ||| ||||||||||||||||||   ||||||||||    
T  23128641 gcgttttgtcgcagtgtttgttcagttcttattgaaagatcaacatcagtcaattacaaattcaatcaatgatttggatgtcaacgttgt 23128730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 7976247 - 7976203
Alignment:
Q  34 tatgcgtcttgttgcagtgttcgtttagttcatattgaaatatca 78  Q
    ||||||||||||||  |||||||||||||||||||| ||| ||||    
T  7976247 tatgcgtcttgttgtggtgttcgtttagttcatattaaaagatca 7976203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 14731030 - 14731066
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||  ||||||||||||||||||||||||||||    
T  14731030 gatgtatgttatcaatttgaatgaatgaatatcattt 14731066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 22571510 - 22571574
Alignment:
Q  50 gtgttcgtttagttcatattgaaata-tcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||||||| ||| ||||||||| | |||| |||||||||| ||| |||||| |||||||||||    
T  22571510 gtgttcgtttggttaatattgaaaaaatcagcttcagtcgattacaaattcaaccaatgatttgg 22571574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 30776710 - 30776774
Alignment:
Q  61 gttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||| |||||||| ||||| ||||| | |||||| ||||| |||||||||||||| | |||||||    
T  30776710 gttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtgaacgttg 30776774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 48750405 - 48750483
Alignment:
Q  129 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||| ||| ||| |||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  48750405 attcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 48750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 24582979 - 24583063
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| | |||||||||    
T  24582979 tcttgttgcggtgttcgttg-gttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttg 24583063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 47132928 - 47133004
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||||||||| ||||||||||  |||||||||||| ||||| ||||||| ||||||||||||||| |||||||||    
T  47132928 gcgtcttgttgcggtgttcgtttgcttcatattgaaagatcagcttcagtcaatcacagattcaatcgatgatttgg 47133004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 19061160 - 19061211
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcatttcattttattttt 223  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19061160 tctgatgtattatatcaatttgaatgaatgaatatcatatcattttattttt 19061211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 36775583 - 36775504
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| | |||||||||||  |||||||||||||||||||||||    
T  36775583 gattcaccctatacgtttttagcgatattgatcatgttattgtctctgatgtattcaatcaatttgaatgaatgaatatc 36775504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 41994428 - 41994540
Alignment:
Q  9 tcttctgcaacgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatga 108  Q
    |||| |||| ||||||||||||||| ||    |||||||  |||||||||| ||||||||||||| ||||||||||||| |||| | ||| |||||||||    
T  41994428 tcttgtgcagcgttgtttgatttcggat----cttgttgtggtgttcgtttcgttcatattgaaagatcagtttcagtcaatcaaatatttaatcaatga 41994523  T
Q  109 tttgggcttcaacgttg 125  Q
    ||||| | |||||||||    
T  41994524 tttggacgtcaacgttg 41994540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 49626942 - 49627026
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||||||  ||||||||||||| ||||| ||||||| |||||| |||||||||||||||||| | |||||||||    
T  49626942 tcttgttgcggtgttcgttg-gttcatattgaaagatcagcttcagtcaatcacaaattcaatcaatgatttggacgtcaacgttg 49627026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 31692328 - 31692257
Alignment:
Q  140 acatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||| |||| |||||||| |||||| || ||||||||| ||||||||||||| ||||||||||||||    
T  31692328 acatttttaacgatgttgatcatgttattacatatgatgtattctatcaatttgaataaatgaatatcattt 31692257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 16262872 - 16262974
Alignment:
Q  19 cgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttc 118  Q
    |||||||||||||||    ||||||||||  ||||||||||  |||||||||||| ||||  | ||||| |||||| ||||||||||||||||| || ||    
T  16262872 cgttgtttgatttcg----cgtcttgttgtggtgttcgtttgattcatattgaaaaatcaactgcagtcaatcacatattcaatcaatgatttgtgcatc 16262967  T
Q  119 aacgttg 125  Q
    |||||||    
T  16262968 aacgttg 16262974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 44543301 - 44543385
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||| |||| |||||||||  ||||||||||||| ||||| || |||| ||||||||||||||||||||||||| | |||||||||    
T  44543301 tcttattgcggtgttcgttg-gttcatattgaaagatcagctttagtcaatcacagattcaatcaatgatttggacgtcaacgttg 44543385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 44915663 - 44915752
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||| |||| || |||||||||||||||||||||||| ||||   |||||| || ||| |||||||||||||||||||| |||| ||||    
T  44915663 tgcgttttgtcgcggtgttcgtttagttcatattgaaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttg 44915752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 19060938 - 19061023
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    |||||||||||||||||||  ||||||||||||| || || ||||||| ||||||| |||||||||| |||||| | |||| |||||    
T  19060938 tcttgttgcagtgttcgttg-gttcatattgaaagattagcttcagtcaatcacaggttcaatcaataatttggacatcaatgttgt 19061023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 16162074 - 16162127
Alignment:
Q  154 attgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||||||| | ||||||||||| ||||||| ||||||||||||||||    
T  16162074 attgatcatattattgtctctgatgtattctatcaatatgaatgaatgaatatc 16162127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 36775761 - 36775689
Alignment:
Q  53 ttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||| |||| |||||||| ||| | ||||| | |||||| |||||||||||||||||||| |||||||||    
T  36775761 ttcgtttggttcgtattgaaagatcggcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttg 36775689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 40163298 - 40163235
Alignment:
Q  144 ttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||| ||||| |  ||||| ||||| ||||||| ||||||||||||||||||||||||    
T  40163298 ttttagcgatgttgattaagttattgtatctcatgtattctatcaatttgaatgaatgaatatc 40163235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 44915889 - 44915936
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||||    
T  44915889 tatctgatgtactctatcaatttgaatgaatgaatatcattttatttt 44915936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 48750223 - 48750298
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||||  ||| |||||||| ||||| ||||| | |||||| ||| |||||||||||||||| |||||||||    
T  48750223 gtgttcgtttgattcgtattgaaagatcagcttcagacaatcacaaatttaatcaatgatttgggcgtcaacgttg 48750298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 50616539 - 50616468
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatca 208  Q
    ||||| |||||||| || |||||||| ||||||||||| ||||||| ||||||||| ||| ||| |||||||    
T  50616539 tttacgtttttagcaatgttgatcatgttattatatctaatgtattttatcaatttaaataaataaatatca 50616468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 50624366 - 50624295
Alignment:
Q  137 tttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatca 208  Q
    ||||| |||||||| || |||||||| ||||||||||| ||||||| ||||||||| ||| ||| |||||||    
T  50624366 tttacgtttttagcaatgttgatcatgttattatatctaatgtattttatcaatttaaataaataaatatca 50624295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 13075529 - 13075455
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatga 202  Q
    |||||| ||||||| ||||||||||||||||| || ||||| ||||| || |||| |||||| || |||||||||    
T  13075529 gattcaccctttacttttttagcgatattgattatgttattgtatctaatatattctatcaacttaaatgaatga 13075455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 16161876 - 16161950
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgtt 124  Q
    |||||||||| |||| |||||||| ||||| || || | |||||| ||||| |||||||||||||| ||||||||    
T  16161876 gtgttcgtttggttcgtattgaaagatcagcttaagacaatcacaaattcattcaatgatttgggcgtcaacgtt 16161950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 41994684 - 41994762
Alignment:
Q  129 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||| |||||| |||||||| ||| |||||||| ||||| |||||||| | || ||||||||||||| ||| ||||||    
T  41994684 attcatcctttaaatttttagtgattttgatcatgttattgtatctgatattttctatcaatttgaataaataaatatc 41994762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 3228297 - 3228382
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||| || ||||| ||||||||| |||||||| |||  | |||||| || ||| || ||||||||||||||||| |||||||||    
T  3228297 tcttgtcgcggtgtttgtttagttcctattgaaagatcgatatcagtcaattacaaatacaatcaatgatttgggcgtcaacgttg 3228382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 23291706 - 23291621
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||| || ||||||||||| ||| |||||||| ||| |  |||||| || ||| |||||| ||||||||||||| |||||||||    
T  23291706 tcttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcatcaacgttg 23291621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 39888432 - 39888469
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||||||||||||| |||||||||||||    
T  39888432 tatctgatgtattatatcaatttgtatgaatgaatatc 39888469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 11121380 - 11121416
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| ||||||||||||||||||||||||||||    
T  11121380 gatgtattctatcaatttgaatgaatgaatatcattt 11121416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 13969350 - 13969314
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| ||||||||||||||||||||||||||||    
T  13969350 gatgtattctatcaatttgaatgaatgaatatcattt 13969314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 25564067 - 25564107
Alignment:
Q  81 ttcagtcgatcacagattcaatcaatgatttgggcttcaac 121  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  25564067 ttcagtcaatcacagattcaatcaatgatttgggcgtcaac 25564107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 30853657 - 30853621
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||||||||||||||||| ||||||||||||||    
T  30853657 gatgtattatatcaatttgaataaatgaatatcattt 30853621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 31919013 - 31919101
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |||||||||||||||||| | |||||| |||    |||||| || |||  |||||||||||||||| || |||||||||    
T  31919013 gcgtcttgtcgcagtgttcgtttagttcctgttgaaagatcgacatcagtcaattacaagttcaatcaatgatttgagcatcaacgttg 31919101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 45789571 - 45789655
Alignment:
Q  42 ttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    |||||||  |||| |||| |||| |||||||||||||  || | || || |||||||||||||||||||||||| || |||||||    
T  45789571 ttgttgcgatgtttgtttggttcctattgaaatatcaactttaatcaattacagattcaatcaatgatttgggcgtcgacgttgt 45789655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 50377570 - 50377610
Alignment:
Q  167 ttatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  50377570 ttatatctgatgtatcttatcaatttgaatgaatgaatatc 50377610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 6217918 - 6217818
Alignment:
Q  9 tcttctgcaacgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatga 108  Q
    |||| ||| ||||||||||||||    |||||||||||    ||||||||| ||  ||||||||| ||||  ||||||| |||||| |||||||||||||    
T  6217918 tcttgtgcgacgttgtttgattt----tgcgtcttgttatgttgttcgtttggtatatattgaaagatcaacttcagtcaatcacaaattcaatcaatga 6217823  T
Q  109 tttgg 113  Q
    |||||    
T  6217822 tttgg 6217818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 24583201 - 24583240
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  24583201 tctgatgtattctatcgatttgaatgaatgaatatcattt 24583240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 24583397 - 24583436
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  24583397 tctgatgtattctatcgatttgaatgaatgaatatcattt 24583436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 34528758 - 34528829
Alignment:
Q  40 tcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgattt 111  Q
    ||||||| | |||||  ||| ||| ||||||||| ||||  ||||||| |||||||||||||||||||||||    
T  34528758 tcttgtttcggtgtttctttggtttatattgaaagatcaacttcagtcaatcacagattcaatcaatgattt 34528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 37720203 - 37720128
Alignment:
Q  50 gtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||| |||| |||||||| ||||  ||||| | |||||| ||||| | |||||||||||| |||||||||    
T  37720203 gtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcatttaatgatttgggcgtcaacgttg 37720128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 43412407 - 43412474
Alignment:
Q  45 ttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttg 112  Q
    |||||||||| ||||  ||||||||||||||||  ||||| || ||| || |||||||||||||||||    
T  43412407 ttgcagtgtttgtttgattcatattgaaatatctatttcaatcaatcgcatattcaatcaatgatttg 43412474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 217
Target Start/End: Original strand, 45789766 - 45789846
Alignment:
Q  135 cctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||||||||||| |||| ||| ||||| ||||||||| |   | ||||||| |||||||||||||| ||| |||||    
T  45789766 cctttacatttttagcgatgttgaacatgttattgtatctgatgca--ctctcaatttaaatgaatgaatatcgttttatttt 45789846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 47133154 - 47133189
Alignment:
Q  172 tctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||| ||||||||||||||||||||||||    
T  47133154 tctgatgtattctatcaatttgaatgaatgaatatc 47133189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 27456565 - 27456643
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggc 115  Q
    ||||||||| || ||||||||||||||| |||||||| |||    |||||| || |||  |||||||||||||||||||    
T  27456565 gcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaagttcaatcaatgatttgggc 27456643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 25564225 - 25564294
Alignment:
Q  136 ctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaata 205  Q
    ||||| ||||||| | || |||||||| | ||| |||| |||||||||||||||||| ||||||| ||||    
T  25564225 ctttatatttttaacaatgttgatcatgtcattgtatcagatgtattatatcaattttaatgaataaata 25564294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 26535586 - 26535623
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  26535586 tatctgatgtactctatcaatttgaatgaatgaatatc 26535623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 27580196 - 27580111
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaac 121  Q
    |||||||||| || |||||| |||||||| |||||||| |||   ||||||  || ||| ||||||| |||||||||||| |||||    
T  27580196 tgcgtcttgtcgcggtgttcatttagttcctattgaaagatcgacttcagtaaattacaaattcaataaatgatttgggcgtcaac 27580111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 34479643 - 34479729
Alignment:
Q  138 ttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcattttatttttgtc 226  Q
    |||| ||||||| ||| ||||  || ||||||||||||||||||  | ||||||| |||||||||||||| ||| ||||  ||||||||    
T  34479643 ttacgtttttagtgatgttgaaaatgttattatatctgatgtat--tctcaatttaaatgaatgaatatcgttttatttattttttgtc 34479729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 38646987 - 38647024
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  38646987 tgatgtactctatcaatttgaatgaatgaatatcattt 38647024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 49648697 - 49648660
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  49648697 tgatgtattttatcaatttgaatgagtgaatatcattt 49648660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 49652231 - 49652275
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||    
T  49652231 attatatc-gatgtactctatcaatttgaatgaatgaatatcattt 49652275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 1742306 - 1742394
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| |  ||||||||||| ||| |||||||| ||| |  ||| || || ||| |||||| ||||||||||||| |||||||||    
T  1742306 gcgtcttgtcgtggtgttcgtttatttcctattgaaagatcggcatcaatcaattacaaattcaaccaatgatttgggcgtcaacgttg 1742394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 8893696 - 8893732
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  8893696 gatgtactctatcaatttgaatgaatgaatatcattt 8893732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 12967443 - 12967407
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  12967443 gatgtactctatcaatttgaatgaatgaatatcattt 12967407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 14872665 - 14872752
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| || |||||| |||||||| |||||||| |||    |||||| || ||| |||||| ||||||||||||| |||||||||    
T  14872665 gcgtcttgtcgcggtgttcatttagttc-tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttg 14872752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 21947685 - 21947597
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| || ||||| ||||||||| |||||||| |||    |||||| || ||| |||||| ||||||||||| | |||||||||    
T  21947685 gcgtcttgtcgcggtgtttgtttagttcttattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttg 21947597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 26771510 - 26771546
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  26771510 gatgtactctatcaatttgaatgaatgaatatcattt 26771546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 34659351 - 34659315
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  34659351 gatgtactctatcaatttgaatgaatgaatatcattt 34659315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 46589552 - 46589588
Alignment:
Q  175 gatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||||| | ||||||||||||||||||||||||||||    
T  46589552 gatgtactctatcaatttgaatgaatgaatatcattt 46589588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 93338 - 93411
Alignment:
Q  144 ttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    |||||||||| || ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  93338 ttttagcgatgtttatcatgttattttatctgatgtattttatcaatttgaatgaatgaatatcattttatttt 93411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 93131 - 93217
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||  |||||||||| ||||||||||||| ||| |||||| || |||||| ||| ||||||||||| || | |||||||||    
T  93131 gtcttgttgtggtgttcgtttggttcatattgaaagatcggtttcactcaatcacatattgaatcaatgattaggacgtcaacgttg 93217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 53239 - 53206
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||| ||||||||||||||||||||||||||    
T  53239 tgatgtactatatcaatttgaatgaatgaatatc 53206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 92562 - 92474
Alignment:
Q  38 cgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgt 126  Q
    ||||||||||  |||||||||| ||||||||||||| |||| ||| |||  ||||||||||||||||||||||||| | ||||||||||    
T  92562 cgtcttgttgtggtgttcgtttggttcatattgaaagatcaattttagtaaatcacagattcaatcaatgatttggacgtcaacgttgt 92474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 92333 - 92292
Alignment:
Q  176 atgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||||||||||||||||||| |||||||| |||||    
T  92333 atgtattatatcaatttgaatgaatgagtatcattttatttt 92292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 1551 - 1472
Alignment:
Q  128 gattcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    |||||| ||| ||| |||| || |||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||    
T  1551 gattcaccctatacgttttaagggatattgatcatgttattgtctctgatgtattctatcaatttgaatgaatgaatatc 1472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 1733 - 1659
Alignment:
Q  49 agtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgt 123  Q
    ||||||||||| |||| |||||||| ||||  ||||| | |||||| |||||||||||||||||||  |||||||    
T  1733 agtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggtatcaacgt 1659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 58156 - 58079
Alignment:
Q  36 tgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    ||||||||||||| ||||| ||||  |||||| ||||| ||||| ||||||| ||||||||||||||| |||||||||    
T  58156 tgcgtcttgttgcggtgtttgtttgtttcatactgaaagatcagcttcagtcaatcacagattcaatcgatgatttgg 58079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 38077 - 38168
Alignment:
Q  39 gtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttgttgat 130  Q
    |||||||| |||||||||||||||||||||||||| ||    ||||||| || ||| |||||||| ||||||||||  ||||| ||||||||    
T  38077 gtcttgttacagtgttcgtttagttcatattgaaagatagacttcagtcaattacaaattcaatcgatgatttgggtgtcaacattgttgat 38168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 6038 - 6128
Alignment:
Q  19 cgttgtttgatttcgtatgcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||||||||||||||    ||| ||||||| |||||| ||| |||||||||||||| | |  ||||||| |||||| ||||||||||||||||||    
T  6038 cgttgtttgatttcg----cgtattgttgcggtgttcatttggttcatattgaaatgttaacttcagtcaatcacatattcaatcaatgatttgg 6128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 1366 - 1454
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    |||||||||||| ||||||||||||||| |||||||| ||| |  |||||| || ||| |||| | |||| |||||||| |||||||||    
T  1366 gcgtcttgttgcggtgttcgtttagttcctattgaaagatcggcatcagtcaattacaaattcgaccaataatttgggcgtcaacgttg 1454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 3911 - 3839
Alignment:
Q  135 cctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttgaatgaatgaatatc 207  Q
    ||||||||||||||||||| | |||||  ||||| |||| |||| | | ||||||||||||||||||||||||    
T  3911 cctttacatttttagcgatgtcgatcactttattgtatcagatgaactctatcaatttgaatgaatgaatatc 3839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 31116 - 31069
Alignment:
Q  170 tatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  31116 tatctgatgtactatatcaatttgaatgaatgaatatcgttttatttt 31069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 26882 - 26831
Alignment:
Q  166 attatatctgatgtattatatcaatttgaatgaatgaatatcatttcatttt 217  Q
    ||||||| ||||||| | ||||||||| |||||||||||||||||| |||||    
T  26882 attatatttgatgtactctatcaattttaatgaatgaatatcattttatttt 26831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 211
Target Start/End: Original strand, 245035 - 245069
Alignment:
Q  177 tgtattatatcaatttgaatgaatgaatatcattt 211  Q
    |||| ||||||||||||||||||||||||||||||    
T  245035 tgtactatatcaatttgaatgaatgaatatcattt 245069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 30290 - 30330
Alignment:
Q  165 tattatatctgatgtattatatcaatttgaatgaatgaatat 206  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  30290 tattatatc-gatgtattttatcaatttgaatgaatgaatat 30330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 16141 - 16104
Alignment:
Q  174 tgatgtattatatcaatttgaatgaatgaatatcattt 211  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  16141 tgatgtaatatctcaatttgaatgaatgaatatcattt 16104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 19122 - 19065
Alignment:
Q  56 gtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 113  Q
    |||| ||||||||||||| || |  ||||||| |||||||| ||||||||||||||||    
T  19122 gtttggttcatattgaaagatgaacttcagtcaatcacagaatcaatcaatgatttgg 19065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 18955 - 18891
Alignment:
Q  129 attcaacctttacatttttagcgatattgatcatattattatatctgatgtattatatcaatttg 193  Q
    ||||| |||||| ||||| || ||| |||||||| ||||| ||||||||||||| |||| |||||    
T  18955 attcaccctttagattttcagggatgttgatcatgttattgtatctgatgtattctatcgatttg 18891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 8534 - 8622
Alignment:
Q  37 gcgtcttgttgcagtgttcgtttagttcatattgaaatatcagtttcagtcgatcacagattcaatcaatgatttgggcttcaacgttg 125  Q
    ||||||||| ||  |||||||||||||| |||||||| |||    ||||||  | ||| |||||| ||||||||||||| |||||||||    
T  8534 gcgtcttgtcgcgatgttcgtttagttcctattgaaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttg 8622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University