View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9889_high_20 (Length: 266)
Name: NF9889_high_20
Description: NF9889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9889_high_20 |
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Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 24480924 - 24481176
Alignment:
| Q |
1 |
atcatcaagattagcaacaacaaatacgaaactatatatcagtatatgaaatttgataaaacagattaaaatacgcttctgaaataacacttatacaaaa |
100 |
Q |
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| T |
24480924 |
atcatcaagattagcaacaacaaatacgaaactatatatcagtatatgaaatttgataaaacagattaaaatacgcttctgaaataacacttatacaaaa |
24481023 |
T |
|
| Q |
101 |
tgatacaacatggagtccaaagcatagctttattacagagcagacttttattactaatgaaaactttattgcaatacaaacaacacaacaatgatcatag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24481024 |
tgatacaacatggagtccaaagcatagctttattacagagcagacttttattactaatgaaaactttattgcaatacaaacaacacaacaatgatcatag |
24481123 |
T |
|
| Q |
201 |
tataactattggaaggagtcaaaatgcatatgtcatcaagcttaatacacagg |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24481124 |
tataactattggaaggagtcaaaatgcatatgtcatcaagcttaatacacagg |
24481176 |
T |
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