View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9889_high_24 (Length: 248)
Name: NF9889_high_24
Description: NF9889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9889_high_24 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 5563247 - 5563487
Alignment:
| Q |
2 |
ataagggttgaatataatagatggctataatttggacacattttgagtataaaatgttcataagcttcacgtttatatcaatataaattgactattagag |
101 |
Q |
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| T |
5563247 |
ataagggttgaatataatagatggctataatttggacacattttgagcataaaatgttcataagcttcaagtttatatcaacataaattgactattagag |
5563346 |
T |
|
| Q |
102 |
accaacaatgaaatgtgggtttctcatgtcattgttcagtcacactatatacgttttgactcaatcctgaggtcttgtcaacccacatattgagttaata |
201 |
Q |
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| T |
5563347 |
accaacaatgaaatgtgggtttctcatgtcattgttcaatcacactatatacgttttgactcaatcctgaggtcttgtcgacccacatcttgagttaata |
5563446 |
T |
|
| Q |
202 |
accttaagaaagaattgaatcaatcccttggttctctgctt |
242 |
Q |
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| T |
5563447 |
accttaagaaagaattgaatcaatcccttggttgtctgctt |
5563487 |
T |
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