View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9889_low_12 (Length: 410)

Name: NF9889_low_12
Description: NF9889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9889_low_12
NF9889_low_12
[»] chr8 (63 HSPs)
chr8 (133-385)||(27691154-27691406)
chr8 (133-385)||(33708696-33708947)
chr8 (133-384)||(8609681-8609931)
chr8 (133-385)||(41042476-41042728)
chr8 (133-384)||(13485992-13486243)
chr8 (136-385)||(42941777-42942026)
chr8 (133-385)||(13108229-13108480)
chr8 (133-385)||(38547228-38547479)
chr8 (136-367)||(41825554-41825785)
chr8 (134-385)||(5036446-5036701)
chr8 (131-367)||(7745022-7745258)
chr8 (176-385)||(9673057-9673266)
chr8 (132-314)||(13282477-13282658)
chr8 (136-367)||(26242224-26242455)
chr8 (133-344)||(22272334-22272547)
chr8 (185-385)||(40339572-40339772)
chr8 (130-252)||(22273861-22273983)
chr8 (133-252)||(42943396-42943515)
chr8 (133-281)||(27406893-27407041)
chr8 (133-252)||(26238726-26238845)
chr8 (133-222)||(27692837-27692926)
chr8 (133-214)||(34681074-34681155)
chr8 (151-281)||(15305815-15305945)
chr8 (151-281)||(15486184-15486314)
chr8 (132-222)||(601704-601794)
chr8 (133-222)||(33762713-33762802)
chr8 (133-222)||(38548831-38548920)
chr8 (130-222)||(29239187-29239279)
chr8 (133-252)||(5038032-5038150)
chr8 (133-252)||(33761069-33761188)
chr8 (133-222)||(13106804-13106893)
chr8 (133-222)||(29237151-29237240)
chr8 (133-222)||(35509214-35509303)
chr8 (134-222)||(33707207-33707295)
chr8 (133-252)||(35510789-35510908)
chr8 (133-252)||(41040720-41040839)
chr8 (131-252)||(41823888-41824009)
chr8 (133-252)||(8608237-8608357)
chr8 (136-252)||(13283965-13284081)
chr8 (132-222)||(13484544-13484634)
chr8 (133-222)||(15308261-15308350)
chr8 (133-222)||(15488630-15488719)
chr8 (133-214)||(43262145-43262226)
chr8 (322-385)||(27406830-27406893)
chr8 (143-256)||(31821428-31821541)
chr8 (322-382)||(15305945-15306005)
chr8 (322-382)||(15486314-15486374)
chr8 (143-267)||(28433706-28433830)
chr8 (136-222)||(9671980-9672066)
chr8 (145-222)||(3151969-3152046)
chr8 (133-184)||(600760-600811)
chr8 (136-222)||(27404213-27404299)
chr8 (170-252)||(31201148-31201230)
chr8 (170-256)||(42897775-42897861)
chr8 (334-370)||(13282665-13282701)
chr8 (169-256)||(33750385-33750472)
chr8 (189-256)||(37526024-37526091)
chr8 (143-222)||(44620671-44620750)
chr8 (209-267)||(40020625-40020683)
chr8 (170-235)||(1320654-1320719)
chr8 (143-256)||(32822371-32822484)
chr8 (143-239)||(462388-462484)
chr8 (143-239)||(33160166-33160262)
[»] chr7 (65 HSPs)
chr7 (133-385)||(27665937-27666189)
chr7 (133-385)||(29996386-29996638)
chr7 (133-385)||(56330-56581)
chr7 (131-384)||(39859102-39859355)
chr7 (133-383)||(30940299-30940549)
chr7 (133-385)||(6602335-6602587)
chr7 (133-385)||(38474015-38474267)
chr7 (133-385)||(47386081-47386333)
chr7 (136-375)||(34776797-34777036)
chr7 (133-384)||(45359336-45359587)
chr7 (136-377)||(24228289-24228530)
chr7 (156-375)||(13168143-13168365)
chr7 (132-378)||(37115419-37115651)
chr7 (133-281)||(20478042-20478190)
chr7 (175-385)||(35693242-35693454)
chr7 (211-385)||(23906133-23906307)
chr7 (133-222)||(23904583-23904672)
chr7 (133-252)||(13169653-13169772)
chr7 (136-335)||(37796103-37796302)
chr7 (189-368)||(48852236-48852415)
chr7 (136-252)||(39857648-39857764)
chr7 (133-252)||(35403589-35403708)
chr7 (243-384)||(46439403-46439544)
chr7 (132-252)||(37113940-37114060)
chr7 (136-222)||(48227941-48228027)
chr7 (133-252)||(22155817-22155936)
chr7 (133-252)||(22211732-22211851)
chr7 (134-252)||(24226582-24226700)
chr7 (130-252)||(47384291-47384413)
chr7 (133-222)||(78014-78103)
chr7 (136-252)||(27664433-27664549)
chr7 (132-252)||(35401968-35402088)
chr7 (322-385)||(20478190-20478253)
chr7 (131-222)||(34774996-34775087)
chr7 (131-222)||(46437105-46437196)
chr7 (136-222)||(6605397-6605483)
chr7 (137-222)||(35691431-35691516)
chr7 (133-222)||(20479719-20479808)
chr7 (133-248)||(38549547-38549662)
chr7 (75-132)||(39426260-39426318)
chr7 (133-194)||(23906295-23906356)
chr7 (136-256)||(13018036-13018158)
chr7 (134-193)||(29994907-29994966)
chr7 (133-252)||(45361246-45361365)
chr7 (142-223)||(13039641-13039722)
chr7 (143-256)||(33038798-33038911)
chr7 (143-256)||(46996703-46996816)
chr7 (288-356)||(13034828-13034896)
chr7 (143-267)||(45463680-45463804)
chr7 (132-216)||(46439539-46439623)
chr7 (136-223)||(37791657-37791744)
chr7 (198-256)||(366763-366821)
chr7 (175-339)||(11682823-11682987)
chr7 (189-356)||(1546343-1546510)
chr7 (143-258)||(34691005-34691120)
chr7 (173-252)||(35344295-35344374)
chr7 (143-222)||(46810715-46810794)
chr7 (170-256)||(2167516-2167602)
chr7 (170-235)||(38613503-38613568)
chr7 (143-267)||(48303639-48303763)
chr7 (143-267)||(4322562-4322686)
chr7 (170-222)||(8421453-8421505)
chr7 (296-356)||(31913632-31913692)
chr7 (143-239)||(46812600-46812696)
chr7 (143-231)||(47341712-47341800)
[»] chr4 (57 HSPs)
chr4 (133-383)||(43519424-43519674)
chr4 (134-385)||(49523125-49523376)
chr4 (136-384)||(41761619-41761867)
chr4 (132-385)||(51011925-51012177)
chr4 (133-384)||(41781539-41781790)
chr4 (133-367)||(48813787-48814021)
chr4 (133-378)||(35404324-35404569)
chr4 (172-384)||(42980674-42980886)
chr4 (156-367)||(48646637-48646848)
chr4 (136-365)||(2693145-2693373)
chr4 (133-222)||(49524733-49524822)
chr4 (133-252)||(35401749-35401868)
chr4 (133-252)||(4173710-4173829)
chr4 (136-367)||(11601674-11601904)
chr4 (143-222)||(39345574-39345653)
chr4 (133-252)||(43507167-43507286)
chr4 (133-252)||(43508623-43508742)
chr4 (271-385)||(11255812-11255926)
chr4 (133-252)||(20493827-20493946)
chr4 (133-252)||(33264382-33264501)
chr4 (133-252)||(51013856-51013975)
chr4 (156-315)||(52868091-52868250)
chr4 (130-214)||(48645252-48645336)
chr4 (132-222)||(4169685-4169775)
chr4 (133-222)||(319273-319362)
chr4 (137-252)||(11254123-11254238)
chr4 (133-252)||(33265980-33266099)
chr4 (133-219)||(320903-320989)
chr4 (134-223)||(20819986-20820075)
chr4 (156-223)||(2691396-2691463)
chr4 (170-256)||(35996100-35996186)
chr4 (133-222)||(833223-833312)
chr4 (133-222)||(5439647-5439736)
chr4 (328-385)||(52868040-52868097)
chr4 (143-267)||(39083649-39083773)
chr4 (143-269)||(39189392-39189518)
chr4 (170-252)||(47941848-47941930)
chr4 (133-222)||(5437811-5437900)
chr4 (143-252)||(10372711-10372820)
chr4 (151-252)||(44794765-44794866)
chr4 (143-267)||(39921504-39921628)
chr4 (138-222)||(43521109-43521193)
chr4 (143-267)||(43779857-43779981)
chr4 (133-252)||(835012-835131)
chr4 (133-252)||(42982422-42982541)
chr4 (170-256)||(44558494-44558580)
chr4 (170-267)||(5484577-5484674)
chr4 (143-252)||(10762591-10762700)
chr4 (136-256)||(7149542-7149662)
chr4 (308-356)||(27382292-27382340)
chr4 (130-214)||(54387890-54387973)
chr4 (143-222)||(39923009-39923088)
chr4 (170-267)||(32652136-32652233)
chr4 (169-222)||(34460261-34460314)
chr4 (170-267)||(44994277-44994374)
chr4 (175-239)||(27624848-27624912)
chr4 (170-222)||(44792971-44793023)
[»] scaffold0058 (3 HSPs)
scaffold0058 (133-385)||(3294-3546)
scaffold0058 (133-385)||(4466-4718)
scaffold0058 (133-252)||(14313-14432)
[»] chr3 (73 HSPs)
chr3 (133-385)||(44794208-44794459)
chr3 (133-382)||(3152113-3152362)
chr3 (139-385)||(2660218-2660464)
chr3 (132-385)||(53190652-53190904)
chr3 (133-384)||(27898974-27899225)
chr3 (131-385)||(46112485-46112739)
chr3 (133-385)||(30599810-30600062)
chr3 (131-385)||(17515308-17515562)
chr3 (133-367)||(51684610-51684844)
chr3 (133-370)||(2226060-2226296)
chr3 (133-377)||(21348723-21348967)
chr3 (133-385)||(23293062-23293314)
chr3 (133-385)||(41977750-41978001)
chr3 (133-385)||(54898437-54898688)
chr3 (135-384)||(43765139-43765388)
chr3 (179-385)||(19987489-19987692)
chr3 (136-367)||(42279510-42279741)
chr3 (146-385)||(35905605-35905843)
chr3 (136-384)||(2377032-2377280)
chr3 (163-384)||(46197750-46197971)
chr3 (207-385)||(44276088-44276266)
chr3 (198-367)||(48830716-48830885)
chr3 (132-252)||(23291569-23291689)
chr3 (133-385)||(600725-600961)
chr3 (211-385)||(7884766-7884939)
chr3 (134-252)||(2378953-2379071)
chr3 (130-222)||(611222-611314)
chr3 (131-222)||(38193510-38193601)
chr3 (133-252)||(44267981-44268100)
chr3 (133-252)||(46308807-46308926)
chr3 (133-222)||(41979352-41979441)
chr3 (133-222)||(53094273-53094362)
chr3 (130-222)||(3150249-3150341)
chr3 (133-252)||(54900044-54900163)
chr3 (136-222)||(42282473-42282559)
chr3 (133-252)||(38191895-38192014)
chr3 (133-252)||(53187742-53187861)
chr3 (132-222)||(46310436-46310526)
chr3 (133-222)||(30598337-30598426)
chr3 (133-222)||(35903825-35903914)
chr3 (133-252)||(46611273-46611392)
chr3 (130-252)||(21350575-21350697)
chr3 (136-222)||(54412547-54412633)
chr3 (133-194)||(7884927-7884988)
chr3 (133-222)||(44795890-44795979)
chr3 (133-222)||(46609149-46609238)
chr3 (133-214)||(51686402-51686483)
chr3 (143-239)||(23774162-23774258)
chr3 (133-252)||(53092623-53092742)
chr3 (133-214)||(48829356-48829437)
chr3 (138-222)||(2661908-2661992)
chr3 (143-257)||(23888772-23888886)
chr3 (133-222)||(46114105-46114195)
chr3 (133-222)||(7883328-7883417)
chr3 (143-252)||(17516943-17517052)
chr3 (133-222)||(28626411-28626500)
chr3 (143-256)||(40508912-40509025)
chr3 (143-256)||(45898349-45898462)
chr3 (143-256)||(48633887-48634000)
chr3 (143-239)||(2977347-2977443)
chr3 (189-256)||(1845840-1845907)
chr3 (133-222)||(27897151-27897239)
chr3 (136-221)||(35572525-35572610)
chr3 (143-252)||(41021008-41021117)
chr3 (208-256)||(25535250-25535298)
chr3 (143-222)||(48635375-48635454)
chr3 (198-256)||(23876979-23877037)
chr3 (170-256)||(45257221-45257307)
chr3 (143-256)||(18430272-18430385)
chr3 (95-128)||(26282629-26282662)
chr3 (130-163)||(43767075-43767108)
chr3 (170-222)||(1847647-1847699)
chr3 (174-222)||(33051467-33051515)
[»] chr5 (46 HSPs)
chr5 (133-385)||(24541083-24541336)
chr5 (132-385)||(2854200-2854451)
chr5 (133-385)||(17574318-17574569)
chr5 (130-383)||(34327632-34327885)
chr5 (133-384)||(7267843-7268093)
chr5 (133-385)||(30468152-30468404)
chr5 (133-344)||(36057526-36057737)
chr5 (136-385)||(18624880-18625129)
chr5 (133-385)||(8539675-8539927)
chr5 (132-365)||(2179786-2180019)
chr5 (132-281)||(29621757-29621906)
chr5 (133-281)||(42473583-42473731)
chr5 (136-281)||(40780553-40780698)
chr5 (133-252)||(12738706-12738825)
chr5 (133-252)||(12801529-12801648)
chr5 (133-222)||(30463900-30463989)
chr5 (133-252)||(8541241-8541360)
chr5 (132-252)||(2852885-2853005)
chr5 (130-222)||(34328827-34328919)
chr5 (133-222)||(7269446-7269535)
chr5 (133-222)||(32134231-32134320)
chr5 (133-222)||(28813765-28813856)
chr5 (322-385)||(29621694-29621757)
chr5 (131-252)||(21842962-21843083)
chr5 (135-252)||(17577905-17578022)
chr5 (133-222)||(40782211-40782300)
chr5 (308-384)||(12737313-12737389)
chr5 (136-252)||(28822060-28822176)
chr5 (243-370)||(28819397-28819524)
chr5 (322-385)||(40780698-40780761)
chr5 (322-385)||(42473520-42473583)
chr5 (130-252)||(41493841-41493963)
chr5 (143-256)||(18728603-18728716)
chr5 (133-222)||(29620138-29620227)
chr5 (143-224)||(43492131-43492212)
chr5 (308-384)||(12800136-12800212)
chr5 (324-384)||(21841182-21841242)
chr5 (327-385)||(32135721-32135779)
chr5 (143-256)||(35395343-35395456)
chr5 (143-256)||(32087524-32087637)
chr5 (131-192)||(42471546-42471607)
chr5 (143-239)||(38596878-38596974)
chr5 (189-252)||(27075876-27075939)
chr5 (143-256)||(43318061-43318174)
chr5 (325-356)||(27349338-27349369)
chr5 (143-256)||(33256410-33256523)
[»] chr1 (64 HSPs)
chr1 (133-385)||(46583428-46583680)
chr1 (136-385)||(33602516-33602765)
chr1 (133-385)||(31238367-31238619)
chr1 (133-385)||(6818550-6818802)
chr1 (133-384)||(25278241-25278492)
chr1 (133-384)||(37344342-37344593)
chr1 (132-385)||(2869578-2869831)
chr1 (133-385)||(4855839-4856090)
chr1 (131-385)||(34778011-34778264)
chr1 (133-384)||(27087283-27087533)
chr1 (131-384)||(50555970-50556223)
chr1 (133-385)||(3013342-3013600)
chr1 (173-385)||(15104481-15104693)
chr1 (131-281)||(9121644-9121794)
chr1 (132-281)||(47013058-47013207)
chr1 (133-294)||(51896115-51896276)
chr1 (133-235)||(25278975-25279077)
chr1 (131-220)||(8167940-8168029)
chr1 (133-222)||(31236819-31236908)
chr1 (134-222)||(50554164-50554252)
chr1 (136-367)||(52643510-52643736)
chr1 (133-222)||(8169568-8169657)
chr1 (132-252)||(46582009-46582129)
chr1 (132-214)||(52641887-52641969)
chr1 (133-222)||(26223587-26223676)
chr1 (133-222)||(34776569-34776658)
chr1 (136-252)||(51894570-51894686)
chr1 (206-281)||(1442594-1442669)
chr1 (322-385)||(1442669-1442732)
chr1 (134-201)||(6816866-6816933)
chr1 (133-252)||(25276742-25276861)
chr1 (133-252)||(37088106-37088225)
chr1 (133-252)||(37345932-37346051)
chr1 (136-222)||(3011858-3011944)
chr1 (75-132)||(12141461-12141518)
chr1 (132-252)||(2871046-2871166)
chr1 (287-384)||(26225427-26225524)
chr1 (133-213)||(25278854-25278934)
chr1 (322-385)||(9121581-9121644)
chr1 (322-385)||(47012995-47013058)
chr1 (326-385)||(51896057-51896116)
chr1 (132-222)||(1444181-1444271)
chr1 (75-132)||(1953919-1953977)
chr1 (133-222)||(4854410-4854499)
chr1 (133-222)||(9120039-9120128)
chr1 (133-222)||(27089279-27089368)
chr1 (132-201)||(33599186-33599255)
chr1 (133-222)||(47011456-47011545)
chr1 (133-193)||(45044949-45045009)
chr1 (189-349)||(51121961-51122121)
chr1 (144-222)||(33599229-33599307)
chr1 (143-256)||(42134492-42134605)
chr1 (143-267)||(5783374-5783498)
chr1 (134-197)||(1442551-1442614)
chr1 (75-132)||(47580627-47580685)
chr1 (143-222)||(44159296-44159375)
chr1 (170-239)||(18183961-18184030)
chr1 (175-252)||(27940650-27940727)
chr1 (143-256)||(31801643-31801756)
chr1 (143-256)||(36895511-36895624)
chr1 (170-235)||(44157470-44157535)
chr1 (143-256)||(46638808-46638921)
chr1 (170-222)||(27952502-27952554)
chr1 (170-222)||(35478124-35478176)
[»] chr6 (41 HSPs)
chr6 (133-385)||(13613454-13613706)
chr6 (134-385)||(20523367-20523618)
chr6 (134-385)||(11355223-11355474)
chr6 (133-384)||(32516877-32517128)
chr6 (137-367)||(10568403-10568633)
chr6 (185-385)||(9398712-9398912)
chr6 (133-384)||(32438957-32439215)
chr6 (133-367)||(6899485-6899719)
chr6 (133-281)||(32455867-32456015)
chr6 (151-278)||(3456766-3456893)
chr6 (211-367)||(7049835-7049991)
chr6 (148-360)||(14338372-14338584)
chr6 (130-253)||(10569888-10570011)
chr6 (136-281)||(7372934-7373079)
chr6 (132-222)||(11357194-11357284)
chr6 (132-252)||(32518467-32518587)
chr6 (132-252)||(18645074-18645193)
chr6 (322-385)||(3456896-3456959)
chr6 (132-252)||(6902868-6902987)
chr6 (133-252)||(20525304-20525423)
chr6 (322-385)||(32455804-32455867)
chr6 (133-222)||(7371175-7371264)
chr6 (133-222)||(9400035-9400124)
chr6 (133-212)||(7051255-7051334)
chr6 (131-198)||(8605349-8605416)
chr6 (133-222)||(3480657-3480746)
chr6 (133-222)||(32454248-32454337)
chr6 (137-211)||(33276805-33276879)
chr6 (133-214)||(13610690-13610771)
chr6 (133-201)||(32437140-32437208)
chr6 (148-256)||(3018433-3018541)
chr6 (143-267)||(17952032-17952156)
chr6 (136-252)||(21068628-21068744)
chr6 (143-258)||(35175862-35175977)
chr6 (174-239)||(2968180-2968245)
chr6 (137-194)||(7049790-7049847)
chr6 (143-252)||(29077338-29077447)
chr6 (170-252)||(4641392-4641474)
chr6 (136-180)||(21091109-21091153)
chr6 (189-257)||(30891180-30891248)
chr6 (227-267)||(34343929-34343969)
[»] chr2 (52 HSPs)
chr2 (133-385)||(40560223-40560475)
chr2 (131-385)||(17696204-17696458)
chr2 (133-375)||(39664650-39664892)
chr2 (131-384)||(19908139-19908393)
chr2 (133-385)||(14388976-14389228)
chr2 (133-385)||(44709637-44709889)
chr2 (137-378)||(42519104-42519346)
chr2 (133-385)||(16763076-16763327)
chr2 (133-385)||(2766934-2767186)
chr2 (133-385)||(39455169-39455421)
chr2 (133-385)||(6797507-6797759)
chr2 (133-281)||(6785977-6786125)
chr2 (133-281)||(37020508-37020656)
chr2 (133-259)||(24208060-24208186)
chr2 (126-367)||(37645480-37645721)
chr2 (133-252)||(39663154-39663273)
chr2 (133-222)||(16376736-16376825)
chr2 (169-277)||(16377197-16377305)
chr2 (136-252)||(19906685-19906801)
chr2 (131-222)||(14387347-14387438)
chr2 (130-241)||(19581411-19581522)
chr2 (322-385)||(24207984-24208047)
chr2 (133-222)||(16764611-16764700)
chr2 (322-385)||(37020656-37020719)
chr2 (133-252)||(40561848-40561967)
chr2 (133-222)||(34400314-34400403)
chr2 (133-222)||(39456780-39456869)
chr2 (322-385)||(6785914-6785977)
chr2 (133-222)||(6783364-6783453)
chr2 (133-222)||(24205598-24205687)
chr2 (136-222)||(6799408-6799494)
chr2 (133-222)||(37022185-37022274)
chr2 (133-222)||(2577480-2577569)
chr2 (143-342)||(361455-361654)
chr2 (170-252)||(15372536-15372618)
chr2 (170-267)||(11023003-11023100)
chr2 (143-356)||(17946104-17946317)
chr2 (143-256)||(29909661-29909774)
chr2 (287-367)||(10716793-10716873)
chr2 (133-177)||(42517558-42517602)
chr2 (136-223)||(31475079-31475166)
chr2 (173-255)||(26584819-26584901)
chr2 (170-256)||(37417310-37417396)
chr2 (143-222)||(41144-41223)
chr2 (136-223)||(37646477-37646564)
chr2 (170-256)||(39593-39679)
chr2 (156-241)||(162056-162141)
chr2 (175-352)||(7744085-7744262)
chr2 (170-239)||(15432365-15432434)
chr2 (143-256)||(25619670-25619783)
chr2 (143-267)||(28246673-28246797)
chr2 (170-222)||(41708432-41708484)
[»] scaffold0564 (1 HSPs)
scaffold0564 (135-385)||(8264-8512)
[»] scaffold1454 (1 HSPs)
scaffold1454 (136-368)||(1266-1497)
[»] scaffold0024 (1 HSPs)
scaffold0024 (211-383)||(37282-37454)
[»] scaffold0345 (1 HSPs)
scaffold0345 (132-222)||(1555-1645)
[»] scaffold0081 (1 HSPs)
scaffold0081 (133-222)||(54258-54347)
[»] scaffold1712 (1 HSPs)
scaffold1712 (133-222)||(982-1071)
[»] scaffold0002 (1 HSPs)
scaffold0002 (129-209)||(436261-436341)
[»] scaffold0477 (1 HSPs)
scaffold0477 (170-252)||(6639-6721)


Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 27691154 - 27691406
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  27691154 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 27691253  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  27691254 catcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgtggcttcttgcatgctttgttgtcctgtacacgtgtcagcaagtcagccacgt 27691353  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27691354 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 27691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 33708947 - 33708696
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||| ||| |||||||||||||| ||| ||| |||||| ||||||||||| ||||||  | ||||||||||||||||||| |||||    
T  33708947 gactaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtc 33708849  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||||||    
T  33708848 catcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttcttgcatgctttgttgtcatgcacacgcgtcagcaagtcaaccacgt 33708749  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33708748 gtacaaggactaaattgatggaaattgtcaaaattcgatatttaacatttcag 33708696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 133 - 384
Target Start/End: Complemental strand, 8609931 - 8609681
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  8609931 gactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 8609832  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| ||| |   ||||||||| ||||||| || |||||||||  |||| |||||||||    
T  8609831 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcgacaaggcagccacgt 8609733  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  8609732 gtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttca 8609681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 41042728 - 41042476
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||| |||| ||||| ||||||||||||||| ||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||| ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||||||| | | ||||||||| |||||||||||||| |||||| |||| ||||||||     
T  41042628 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcctgcacatgtgtcaacaaggcagccacgg 41042529  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| || ||||||| | ||||||| ||||||    
T  41042528 gtacaaggactaaattgatggaaattgtaaaaattcaagatttaacttttcag 41042476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 133 - 384
Target Start/End: Complemental strand, 13486243 - 13485992
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||||| || | |||||||| ||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  13486243 gactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtc 13486144  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||| ||||||||  ||| ||| ||||||||||||| | | ||||||| | ||||| |||| |||||||||| |||| ||| |||||    
T  13486143 catcaaaatggtccctctgtccaaaagctccattagtagtgatgatgtgtcctcttgcatgttgtgttgccctgtacacgtgtcaacaaggcagtcacgt 13486044  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  13486043 gtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttca 13485992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 136 - 385
Target Start/End: Original strand, 42941777 - 42942026
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||  |||||| |||||||||||||||||||||||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   ||||||||||||||||  ||||||| | | ||||||||| | | ||||||| | |||||||  | |||||||||| |||| ||||||| ||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgtgtcctcttgcatgttgtgttgtcaggtacacgtgtcaacaaggcagccacatgta 42941976  T
Q  336 caaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  42941977 caaggactaaattgatggaaatggtaaaaattcgagatttaacttttcag 42942026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 13108480 - 13108229
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||| ||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  | ||||| | ||||||| ||| |   ||||||||| ||||||| || |||||||||| |||| |||||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgt 13108282  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||| ||||||    
T  13108281 gtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcag 13108229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 38547228 - 38547479
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| ||||  |||||||||| ||||||| | |||||||||||||||||||||||||    
T  38547228 gactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 38547327  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   |||||||| |||||||  ||||||| | ||||||| ||| |   ||||||||| ||||||| || |||||||||| |||| |||||||||    
T  38547328 catcaaaatggtccctccatccaaaagctccgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgt 38547426  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  38547427 gtacaaggactaaattgatggaaatgataaaaattcgatacttaacttttcag 38547479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 136 - 367
Target Start/End: Complemental strand, 41825785 - 41825554
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||||| |||||||| |||||||    |||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41825686  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   ||| ||||||||||||  || |||| ||||||||||||| ||| ||||||||| |||||||||| |||| ||||| |||| ||| ||||||||    
T  41825685 caaaatggtcactccgtccaaaagctctgttagtagtgatgatgtgtcttcttgcatgctgtgttgtcctgtacacatgtcaacaaggcagtcacgtgta 41825586  T
Q  336 caaggactaaattgatggaaatggtcaaaatt 367  Q
    |||||||||| ||||| |||||||| ||||||    
T  41825585 caaggactaatttgatagaaatggtaaaaatt 41825554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 134 - 385
Target Start/End: Original strand, 5036446 - 5036701
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 233  Q
    ||||||||||||||||||||| | |||||||||||||| | |||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  234 atcaaatccgtccctccgtccaa---aaag-tccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagcca 329  Q
    ||||||   ||| ||||||||||   |||| || |||| |  |||||||||| | | ||||||| | ||||||| || |||||||||| |||| ||||||    
T  5036546 atcaaaatggtctctccgtccaaattaaagctctgttagtgatgatgatgtgtcctcttgcatgttgtgttgtcttgtacacgtgtcaacaaggcagcca 5036645  T
Q  330 cgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  5036646 cgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcag 5036701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 131 - 367
Target Start/End: Complemental strand, 7745258 - 7745022
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    |||||||||| ||||||||||||  |||||||| ||||||| |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||     
T  7745258 tagactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagaca 7745159  T
Q  231 tccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccac 330  Q
    |||||||||   |||||||| |||||||  ||||||| | ||||||||||| | | ||||||| | ||||||| || |||||||||| |||| ||| ||     
T  7745158 tccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtcctcttgcatgatgtgttgtcttgtacacgtgtcaacaaggcagtcat 7745059  T
Q  331 gtgtacaaggactaaattgatggaaatggtcaaaatt 367  Q
     |||||||||||||| |||||||||||||| ||||||    
T  7745058 atgtacaaggactaatttgatggaaatggtaaaaatt 7745022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 176 - 385
Target Start/End: Complemental strand, 9673266 - 9673057
Alignment:
Q  176 aaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgat 275  Q
    ||||||||| ||||||||||  ||||||||||||| ||||||||||||||||||||||||||||   ||||||||||| ||||  | ||||| | |||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgat 9673167  T
Q  276 gatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatattt 375  Q
    |||||| ||| ||||||| | ||||||| || |||||||||| |||| |||||||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  9673166 gatgtgtcttcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagattt 9673067  T
Q  376 aacatttcag 385  Q
    ||| ||||||    
T  9673066 aacttttcag 9673057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 132 - 314
Target Start/End: Original strand, 13282477 - 13282658
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  13282477 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgt 13282576  T
Q  232 ccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtg 314  Q
    ||||||||   ||||||||||||||||  ||||||| | ||||||||||| |   ||||||||| ||||||| || |||||||    
T  13282577 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtc-ccttgcatgctctgttgtcttgtacacgtg 13282658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 136 - 367
Target Start/End: Complemental strand, 26242455 - 26242224
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||| ||||| | |||||||| ||||||| |||||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||    
T  26242455 taatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccat 26242356  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   ||||||||||||||||  ||||||| | | ||||||||| | | ||||||| | ||||||| || |||||||||| |||| || ||| |||||    
T  26242355 caaaatggtccctccgtccaaaagctccgttagtggcgatgatgtgtcctcttgcatgttgtgttgtcttgtacacgtgtcaacaaggcaaccatgtgta 26242256  T
Q  336 caaggactaaattgatggaaatggtcaaaatt 367  Q
    |||  ||||| |||||||||||||| ||||||    
T  26242255 caataactaatttgatggaaatggtaaaaatt 26242224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 133 - 344
Target Start/End: Original strand, 22272334 - 22272547
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaa--tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    |||||||||||||||||||||  ||||||||||||||  || | |||||||||| |||||||||||  |||||||||||||||||||||||||||| |||    
T  22272334 gactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacg 22272433  T
Q  231 tccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccac 330  Q
    |||||||||   |||||||| |||||||  ||||||| | |||||||||||   | ||||||| | ||||||| || ||| |||||| |||| |||||||    
T  22272434 tccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgtgttctcttgcatgttgtgttgtcatgtacatgtgtcaacaaggcagccac 22272533  T
Q  331 gtgtacaaggacta 344  Q
    ||||||||||||||    
T  22272534 gtgtacaaggacta 22272547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 185 - 385
Target Start/End: Complemental strand, 40339772 - 40339572
Alignment:
Q  185 tctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgact 284  Q
    |||||||| ||  ||||||||||||||||| ||||||||||||| ||||||||||   |||||| | |||||||  ||||||| ||||||||||||  |     
T  40339772 tctgaattatgtgaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgtatcc 40339673  T
Q  285 ttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||||| | ||||||| || |||| ||||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| |||||    
T  40339672 ttttgcatgttgtgttgtcatgtacacctgtcaacaaggcagccacgtgtacaaggactaaatggatggaaatggtaaaaattcgagatttaacttttca 40339573  T
Q  385 g 385  Q
    |    
T  40339572 g 40339572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 22273983 - 22273861
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 229  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   | |     
T  22273983 atagactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaaaat 22273884  T
Q  230 gtccatcaaatccgtccctccgt 252  Q
    ||| |||||||| ||||||||||    
T  22273883 gtcaatcaaatcagtccctccgt 22273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 42943515 - 42943396
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||   | | |||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 42943416  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  42943415 aatcaaatcagtccctccgt 42943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 133 - 281
Target Start/End: Complemental strand, 27407041 - 27406893
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||| | |||| |||||||| |||||| |||||| ||||||  |||||| | | ||||||  |  ||||||||||||||||||||||||    
T  27407041 gactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagacgtc 27406942  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    ||||||||| ||| |||||||||||| ||||||||| ||||||||||||    
T  27406941 catcaaatcagtctctccgtccaaaatgtccgttaacagtgatgatgtg 27406893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 26238726 - 26238845
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||||  ||||||   | | |||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 26238825  T
Q  233 catcaaatccgtccctccgt 252  Q
    ||||||||| ||||||||||    
T  26238826 catcaaatcagtccctccgt 26238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 27692926 - 27692837
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||||||||| | |||||||||||||||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 34681155 - 34681074
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 214  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  34681155 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 151 - 281
Target Start/End: Original strand, 15305815 - 15305945
Alignment:
Q  151 gtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctcc 250  Q
    |||| |||||||| |||||| || ||| || ||| ||||||| |   ||||||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  15305815 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15305914  T
Q  251 gtccaaaaagtccgttaatagtgatgatgtg 281  Q
    ||||||||  |||||||| ||||||||||||    
T  15305915 gtccaaaatatccgttaacagtgatgatgtg 15305945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 151 - 281
Target Start/End: Original strand, 15486184 - 15486314
Alignment:
Q  151 gtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctcc 250  Q
    |||| |||||||| |||||| || ||| || ||| ||||||| |   ||||||| | |||||||||||||||||||||||||||||||||| ||||||||    
T  15486184 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15486283  T
Q  251 gtccaaaaagtccgttaatagtgatgatgtg 281  Q
    ||||||||  |||||||| ||||||||||||    
T  15486284 gtccaaaatatccgttaacagtgatgatgtg 15486314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 601794 - 601704
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  601794 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 33762802 - 33762713
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  33762802 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 38548920 - 38548831
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | ||| |||||||||||    
T  38548920 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 29239279 - 29239187
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||| || |||||| | ||||||| | |||||||||||||||    
T  29239279 atagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 5038150 - 5038032
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||||   |||||||||| ||||| |||||||||||||||||||   | | |||    
T  5038150 gactaatacctcaaattcgtct-tgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatttacaaaatgtc 5038052  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  5038051 aatcaaatcagtccctccgt 5038032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 33761069 - 33761188
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||  |||||||| ||||||| ||||| |||||| ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  33761069 gactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33761168  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  33761169 aatcaaatcagtccctccgt 33761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 13106804 - 13106893
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||| ||| || ||||||||||| ||||||| | |||||||||||||||    
T  13106804 gactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 29237151 - 29237240
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  29237151 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 35509214 - 35509303
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||| |||| |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  35509214 gactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 33707207 - 33707295
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 35510908 - 35510789
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| ||||||  |||||||||  ||||||| | |||||||||||||||   | | |||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 35510809  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  35510808 aatcaaatcagtccctccgt 35510789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 41040720 - 41040839
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||||| |||  |||||||| |||||||||| |||||||| |||||||||| ||||||| |||||| |||| |||||||   | | |||    
T  41040720 gactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaatttacaaaatgtc 41040819  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  41040820 aatcaaatcggtccctccgt 41040839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 41823888 - 41824009
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    ||||||||||||| |||||||||| |||||||| ||||||| || || ||||||  |||||||||| |||||||||||||||||  ||||||   | | |    
T  41823888 tagactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatg 41823987  T
Q  231 tccatcaaatccgtccctccgt 252  Q
    | ||||||||| ||||||||||    
T  41823988 ttcatcaaatcagtccctccgt 41824009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 8608237 - 8608357
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctg-aattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||| |||||||||| |||||||| ||||||||| ||| |||||| ||| |||||||| ||||||| | |||||||||||||||   | | ||    
T  8608237 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaatttataaaatgt 8608336  T
Q  232 ccatcaaatccgtccctccgt 252  Q
    | |||||||| ||||||||||    
T  8608337 caatcaaatcagtccctccgt 8608357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 13284081 - 13283965
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||| ||||||||||| |||||||| ||||||||||||| || ||| ||||||||||| ||||||| | ||||||| |||||||   | | ||| ||    
T  13284081 taataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaat 13283982  T
Q  236 caaatccgtccctccgt 252  Q
    |||||| ||||||||||    
T  13283981 caaatcagtccctccgt 13283965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 13484544 - 13484634
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||| |||||||||||||  |||||||| |||||||||||||||||||| ||||||||||| ||||   ||||| |||| |||||||    
T  13484544 agactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaattgttattttgtccttgaattt 13484634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 15308350 - 15308261
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| | |||||||||||||||    
T  15308350 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 15488719 - 15488630
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| | |||||||||||||||    
T  15488719 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 43262226 - 43262145
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 214  Q
    |||||||||||||||||||||| | |||||| ||||||| || ||||||| | || |||||||| |||||||||||||||||    
T  43262226 gactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcc 43262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 27406893 - 27406830
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  | | ||||||||||||    
T  27406893 gtcagccacgtgtacaaggactaaactgatggaaatggtcaaaatttaaaaattaacatttcag 27406830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 31821428 - 31821541
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| | |  |||| ||| |||||| || |||| ||| ||||||| | |||||||| ||||||  |||||||||||||||       
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaag 31821527  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  31821528 gtccctccgtccaa 31821541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 15305945 - 15306005
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacattt 382  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| | | |||||||||    
T  15305945 gtcagccacgtatacaaggactaaactgatggaaatggtcaaaattcaaaacttaacattt 15306005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 15486314 - 15486374
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacattt 382  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| | | |||||||||    
T  15486314 gtcagccacgtatacaaggactaaactgatggaaatggtcaaaattcaaaacttaacattt 15486374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 267
Target Start/End: Complemental strand, 28433830 - 28433706
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| |||||||||||||||| ||  |||||||||||||||| || |||||  | ||||||| |  ||||||||||||||    |||||||||| | | |    
T  28433830 tcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttc 28433731  T
Q  243 gtccctccgtccaaaaagtccgtta 267  Q
    |||||||||||||||| || |||||    
T  28433730 gtccctccgtccaaaaggttcgtta 28433706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 9671980 - 9672066
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||| |||||||||| |||||||| |  ||||   ||||||||||  |||||||||| |||||||||||||||||| ||||||    
T  9671980 taataccttaaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 3151969 - 3152046
Alignment:
Q  145 aaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||| |||| ||||||| ||||||| ||||||||| ||| |||| |||| ||||||| ||||||||||||| |||||    
T  3151969 aaatttgtccttgaatttaaaaaaattggccaaatttgtccctgagtttttcaaaatagctatttagtcccttaattt 3152046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 600760 - 600811
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtc 184  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||| ||||||    
T  600760 gactaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtc 600811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 27404213 - 27404299
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| |  |||||||| |||||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 31201230 - 31201148
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgt 252  Q
    |||||||||||||||  | |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||   ||||||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 42897861 - 42897775
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    ||||||||||||||| || |||| ||  ||||||| | ||||||| |||||||  |||||||||||||||   ||||||||||||||    
T  42897861 tcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 42897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 13282665 - 13282701
Alignment:
Q  334 tacaaggactaaattgatggaaatggtcaaaattcga 370  Q
    ||||||||||||||||||||||||||| |||||||||    
T  13282665 tacaaggactaaattgatggaaatggtaaaaattcga 13282701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 33750472 - 33750385
Alignment:
Q  169 atcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    ||||||||| |||||| || |||| ||| ||||||| | |||||||||||||||  ||||| | |||||||   ||||||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaa 33750385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 37526091 - 37526024
Alignment:
Q  189 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    |||| ||| ||||||| | |||||||||||||||| ||||| |||||||||   ||||||||||||||    
T  37526091 aattatgcgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtccaa 37526024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 44620750 - 44620671
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||| |||||||||||||||  ||  ||||| |||| ||||| |  |||||||||||||||| |||| ||||||||||||    
T  44620750 tcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaattt 44620671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 40020683 - 40020625
Alignment:
Q  209 tagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgtta 267  Q
    ||||||||||||||    |||||||||||| | ||||||||||||||||| ||||||||    
T  40020683 tagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 40020625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 1320654 - 1320719
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||| |||||| || || |||| ||||||||||| | |||||||||||||||  |||||||||||    
T  1320654 tcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcagacgtccat 1320719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 32822371 - 32822484
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| ||||||| |||||||| |   ||||||||||||| || || |||| |  |||||||| | |||||||||||||||  |||| ||||||||||       
T  32822371 tcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtccatcaaaaag 32822470  T
Q  243 gtccctccgtccaa 256  Q
    |||| |||||||||    
T  32822471 gtccttccgtccaa 32822484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 462484 - 462388
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaa 239  Q
    |||||||||||  |||||||| | | ||||||||||||| ||  | |||| ||| ||||||| | ||||||| |||||||  || ||||||||||||    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaa 462388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 33160262 - 33160166
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaa 239  Q
    |||||||||||| |||||||| | |  |||||||||||| || || |||| ||  ||||||| | |||||| ||||||||  |||||| ||||||||    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaa 33160166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 27666189 - 27665937
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | ||||||||||||||||||| |||||    
T  27666189 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 27666090  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  27666089 catcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgtggcttcttgcatgctttgttgtcctgtacacgtgtcagcaagtcagccacgt 27665990  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27665989 gtacaaggactaaattgatggaaattgtcaaaattcgatatttaacatttcag 27665937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 29996638 - 29996386
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| || ||| ||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  29996638 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtc 29996539  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||| ||| ||| || |||| ||||||||| || |||||||||||||| |||| |||||    
T  29996538 catcaaattcgtccctccatccaaaaggtccgttaatagtgatgacgtggcttcttacatgttttgttgtcatgtacacgtgtcagcaaatcagtcacgt 29996439  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29996438 gtacaaggactaaattgatggaaatggtcaaaattcaatatttaacatttcag 29996386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 56330 - 56581
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| |||||||||| || |||||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||| ||  ||||||||||||||| ||| |||| ||||||||||||| ||| ||||||| | ||||||| || |||||||||||||||||||||||||    
T  56430 catcaattcactccctccgtccaaaatgtctgttagtagtgatgatgtggcttcttgcatgttgtgttgtcttgtacacgtgtcagcaagtcagccacgt 56529  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  56530 gta-agagactaaattgatggaaatggtcaaaattcgatatttaacatttcag 56581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 131 - 384
Target Start/End: Complemental strand, 39859355 - 39859102
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  39859355 tagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacg 39859256  T
Q  231 tccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccac 330  Q
    ||| |||||   ||||||||||||||||  ||||||| | ||||||| ||| | | ||||||||| ||||||| || |||||||||| |||| |||||||    
T  39859255 tccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtgtcaacaagacagccac 39859156  T
Q  331 gtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||| || |||||    
T  39859155 gtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttca 39859102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 133 - 383
Target Start/End: Complemental strand, 30940549 - 30940299
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||| ||||| || | |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| ||||     
T  30940549 gactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgtt 30940450  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||| ||||||||||||  ||||||| | ||||||||||| | | ||||||||| |||||||||| |||| ||||| |||| |||||||||    
T  30940449 catcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgtgtcctattgcatgctgtgttgtcctgtacacatgtcaacaaggcagccacgt 30940350  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttc 383  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||| ||||    
T  30940349 gtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttc 30940299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 6602335 - 6602587
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||| |||||||||| || ||||||||||||||||||| ||| |  || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  6602335 gactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 6602434  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | |||||||  || | ||||||||||| ||||||| || |||||||||| | || |||||||||    
T  6602435 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacatgtccttttgcatgctgtgttgtcatgtacacgtgtcaaccaggcagccacgt 6602534  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||| | ||||||    
T  6602535 gtacaaggactaatttgatggaaatggtaaaaattcgagatttatcttttcag 6602587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 38474267 - 38474015
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||||| ||||  ||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
     ||||||   |||| |||||||||||  ||||||| | ||||||||||| | | ||| ||||| |||||||||| |||||||||| |||| |||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgtgtcctcttgtatgctgtgttgtcctgtacacgtgtcaacaagacagccacgt 38474068  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    || |||||||| |||||||||||||||| ||||||| | ||||||| ||||||    
T  38474067 gtgcaaggactgaattgatggaaatggtaaaaattcaagatttaacttttcag 38474015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 47386333 - 47386081
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| | |||||||||||||| | ||||||||||  |||||||||| |||||| ||||||||| || |||||||||||||||    
T  47386333 gactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtc 47386234  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   |||  |||||||||||  ||||||| | |||||||||||   | ||||||| | |||||||||| ||| |||||| |||| |||||||||    
T  47386233 catcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgtgttctcttgcatgatgtgttgtcctgtacaagtgtcaacaaggcagccacgt 47386134  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||| ||||||    
T  47386133 gtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcag 47386081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 136 - 375
Target Start/End: Complemental strand, 34777036 - 34776797
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||| | | ||||||||||||| |||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34777036 taatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34776937  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   ||||||||||||||||| ||||||| |  |||||| ||| | | ||||||| | ||||||| || ||||||| || |||| || |||| ||||    
T  34776936 caaaatggtccctccgtccaaaaactccgttagtgatgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgccaacaaggcaaccacatgta 34776837  T
Q  336 caaggactaaattgatggaaatggtcaaaattcgatattt 375  Q
    |||| ||||| |||||||||||||| ||||||||||||||    
T  34776836 caagaactaatttgatggaaatggtaaaaattcgatattt 34776797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 133 - 384
Target Start/End: Original strand, 45359336 - 45359587
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||| ||||| |||| |||||||||||||||||| ||||| ||||  |||||||||| ||||||||||||||||| |||||||||||||||||    
T  45359336 gactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtc 45359435  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   |||||||| |||||||  ||||||| | ||||||| ||| | | ||||||||| ||||||| || |||||| |||  ||| ||| |||||    
T  45359436 catcaaaatggtccctccatccaaaagctccgttagtggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtttcaaaaaggcagtcacgt 45359535  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||||||||| |||||||||||||| ||||||||| |||| || |||||    
T  45359536 gtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttca 45359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 136 - 377
Target Start/End: Complemental strand, 24228530 - 24228289
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||| ||||| | ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  24228530 taatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 24228431  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   |||||| |||||||||  ||| ||| | ||||||||||| | | ||||||| | ||||||| |  |||||||||| |||| ||||||||||||    
T  24228430 caaaatggtcccttcgtccaaaagctccattagtggtgatgatgtgtcctcttgcatgttgtgttgtcatatacacgtgtcaacaaggcagccacgtgta 24228331  T
Q  336 caaggactaaattgatggaaatggtcaaaattcgatatttaa 377  Q
    | | |||||||||||||||||| || |||||| || ||||||    
T  24228330 cgaagactaaattgatggaaattgtaaaaatttgagatttaa 24228289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 375
Target Start/End: Original strand, 13168143 - 13168365
Alignment:
Q  156 tgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccct---gaattttacagacgtccatcaaatccgtccctccgt 252  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||   |||||||||||||||||||||||   |||| |||||    
T  13168143 tgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccgt 13168242  T
Q  253 ccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatg 352  Q
    ||||||  ||||||| | ||||||| ||| | | ||||||||| ||||||| || |||||||||| |||| ||| |||||||||||||||||| ||||||    
T  13168243 ccaaaagctccgttagtggtgatgacgtgtcatcttgcatgctgtgttgtcatgtacacgtgtcaacaagacagacacgtgtacaaggactaatttgatg 13168342  T
Q  353 gaaatggtcaaaattcgatattt 375  Q
    |||||||| ||||||||| ||||    
T  13168343 gaaatggtaaaaattcgagattt 13168365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 132 - 378
Target Start/End: Complemental strand, 37115651 - 37115419
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||||||||||||||  |||||||||||||||| | |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  37115651 agactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgt 37115552  T
Q  232 ccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacg 331  Q
    ||||||||   ||||||||||||||||  ||||||| | ||||||||||| | | ||||||||              ||||||||| |||| ||||||||    
T  37115551 ccatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcatgc--------------cacgtgtcaacaaggcagccacg 37115466  T
Q  332 tgtacaaggactaaattgatggaaatggtcaaaattcgatatttaac 378  Q
    ||||||||||||| ||| ||| ||||||| ||||||||| |||||||    
T  37115465 tgtacaaggactatattaatgaaaatggtaaaaattcgagatttaac 37115419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 133 - 281
Target Start/End: Original strand, 20478042 - 20478190
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||  ||||||||| | ||||||| | |||||||||||||||| ||||||||    
T  20478042 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 20478141  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  20478142 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 20478190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 175 - 385
Target Start/End: Complemental strand, 35693454 - 35693242
Alignment:
Q  175 caaattcgtctctgaattttgcaaaatatctat--ttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagt 272  Q
    ||||||||||  ||||||||||  ||||||| |  ||||||||||||||||||||||||||||||||   |||||||| |||||||  || |||| | ||    
T  35693454 caaattcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggt 35693355  T
Q  273 gatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgata 372  Q
    ||||||||| | | |||||||   ||||||| || |||||||||| |||| ||||||||||||||||||||||||||||| ||||||| || |||||| |    
T  35693354 gatgatgtgtcctcttgcatgtagtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatgaaaatggtaaagattcgaga 35693255  T
Q  373 tttaacatttcag 385  Q
    |||||| ||||||    
T  35693254 tttaacttttcag 35693242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 211 - 385
Target Start/End: Complemental strand, 23906307 - 23906133
Alignment:
Q  211 gtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcaca 310  Q
    |||||| |||||||||| |||||||||||   ||||||||||||||||  ||||||||| | ||||| ||| | | ||||||||| |||||||||| |||    
T  23906307 gtccctaaattttacagtcgtccatcaaaatggtccctccgtccaaaagctccgttaatggcgatgacgtgtcctcttgcatgctgtgttgtcctgtaca 23906208  T
Q  311 cgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||| |||| ||  ||| |||||||||||||||||||||||||| || ||||||||| ||||||| ||||||    
T  23906207 cgtgtcaacaaggcaaacacttgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcag 23906133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 23904583 - 23904672
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  23904583 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaattt 23904672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 13169772 - 13169653
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||   | | |||    
T  13169772 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 13169673  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  13169672 aatcaaatcagtccctccgt 13169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 136 - 335
Target Start/End: Complemental strand, 37796302 - 37796103
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||||||||||| |||| |||||||| ||||||| ||||||||||||    |||||||| |||||||||||||||||||||||||||| |||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   ||||||||||||| ||  |||||||    || ||||||| | | ||||||| | ||||||| |  ||||||||||  ||| ||||||||||||    
T  37796202 caaaatagtccctccgtccataagctccgttagcgatgctgatgtgtcctcttgcatgttgtgttgtcttctacacgtgtcaagaaggcagccacgtgta 37796103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 368
Target Start/End: Complemental strand, 48852415 - 48852236
Alignment:
Q  189 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgacttttt 288  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||   ||| ||| ||||||||  || |||| | ||||||||||| | | ||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgtgtcctctt 48852316  T
Q  289 gcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattc 368  Q
     |||| | ||||||| || ||| |||||| |||| ||| |||||||||||| ||||| |||||||||||||| |||||||    
T  48852315 acatgatgtgttgtcttgtacatgtgtcaacaagacagtcacgtgtacaagaactaatttgatggaaatggtaaaaattc 48852236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 39857648 - 39857764
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| ||||||   | | ||| ||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaat 39857747  T
Q  236 caaatccgtccctccgt 252  Q
    |||||| ||||||||||    
T  39857748 caaatcagtccctccgt 39857764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 35403708 - 35403589
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  35403708 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35403609  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  35403608 aatcaaatcagtccctccgt 35403589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 243 - 384
Target Start/End: Complemental strand, 46439544 - 46439403
Alignment:
Q  243 gtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggac 342  Q
    ||||||||||||||||  ||||||| | |||| |||||| | | ||||||| | ||||||| || |||||||||| || | |||||||||||||| ||||    
T  46439544 gtccctccgtccaaaagctccgttagtggtgacgatgtgtcctcttgcatgttgtgttgtcttgtacacgtgtcaacagggcagccacgtgtacatggac 46439445  T
Q  343 taaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    |||||||||||||||||| ||||||||| ||||||| |||||    
T  46439444 taaattgatggaaatggtaaaaattcgagatttaacttttca 46439403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 37113940 - 37114060
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||| || ||||||||||| ||||||||||||||||||| |||||   | | ||    
T  37113940 agactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatttacaaaatgt 37114039  T
Q  232 ccatcaaatccgtccctccgt 252  Q
    | |||||||| ||||||||||    
T  37114040 caatcaaatcagtccctccgt 37114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 48228027 - 48227941
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaattt 48227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 22155936 - 22155817
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||| || ||||||| |||||||| ||||||||||||||||||||  |||||||||||||||| |||||| ||||||||||||   | | |||    
T  22155936 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22155837  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  22155836 aatcaaatcagtccctccgt 22155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 22211851 - 22211732
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||| || ||||||| |||||||| ||||||||||||||||||||  |||||||||||||||| |||||| ||||||||||||   | | |||    
T  22211851 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22211752  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  22211751 aatcaaatcagtccctccgt 22211732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 24226582 - 24226700
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 233  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||  |||||||||| ||||| |||||| |||| |||||||   | | |||     
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtca 24226681  T
Q  234 atcaaatccgtccctccgt 252  Q
    |||||||| ||||||||||    
T  24226682 atcaaatcagtccctccgt 24226700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 47384291 - 47384413
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 229  Q
    ||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||  |||||||||| ||||||||| |||||||| ||||||   | |     
T  47384291 atagactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaat 47384390  T
Q  230 gtccatcaaatccgtccctccgt 252  Q
    ||| |||||||| ||||||||||    
T  47384391 gtcaatcaaatcagtccctccgt 47384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 78103 - 78014
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||  |||||||| ||||||||||||| |||||| ||||||||||||||||||| | || ||||||||||||    
T  78103 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaattt 78014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 27664433 - 27664549
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||||||||||| |||| |||||||| ||||||||||||| || ||| ||||||||||||||||||| | |||||||||||||||   | | ||| ||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaat 27664532  T
Q  236 caaatccgtccctccgt 252  Q
    |||||| ||||||||||    
T  27664533 caaatcagtccctccgt 27664549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 35401968 - 35402088
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| || |||||| ||||||||||| ||||||| | |||||||||||||||   | | ||    
T  35401968 agactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 35402067  T
Q  232 ccatcaaatccgtccctccgt 252  Q
    | |||||||| ||||||||||    
T  35402068 caatcaaatcagtccctccgt 35402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 20478190 - 20478253
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  20478190 gtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcag 20478253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 34774996 - 34775087
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||| ||||||||||||  |||||||||||||||||| ||||||| |   |||||||||||||||| |||||||||||||||||||    
T  34774996 tagactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaattt 34775087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 46437105 - 46437196
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||  |||||||||| ||||| |||||| |||| |||||||    
T  46437105 tagactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaattt 46437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 6605483 - 6605397
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||| |||| |||||||||||||||||| |||||| ||  ||||||||||| ||||| |||||||||||||||||||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 35691431 - 35691516
Alignment:
Q  137 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||| ||||| |||||| |||| |||||||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaattt 35691516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 20479808 - 20479719
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  20479808 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 20479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 38549547 - 38549662
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||| |||||||||| |||||||| ||||||| ||||| |||||| ||||||||||  ||||||||||||| |||  ||||||   | | |||    
T  38549547 gactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgtc 38549646  T
Q  233 catcaaatccgtccct 248  Q
    ||||||||| ||||||    
T  38549647 catcaaatcagtccct 38549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 39426260 - 39426318
Alignment:
Q  75 tgttgtaaatt-agatgtggaattatcatgtataagaagaaattaaaagaaatatgata 132  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  39426260 tgttgtaaatttagatgtggaactatcatgtataagaagaaattaaaagaaatatgata 39426318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 23906356 - 23906295
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaatttt 194  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||    
T  23906356 gactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 256
Target Start/End: Original strand, 13018036 - 13018158
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgc--aaaatatctatttagtccctgaattttacagacgtcc 233  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||    ||||| ||  || ||||||||||  || |||||||| ||| ||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcctcaaatttagcgaaatatatctatttcatctctgaatttaacatacgtcc 13018135  T
Q  234 atcaaatccgtccctccgtccaa 256  Q
    ||||||   ||||||||||||||    
T  13018136 atcaaaatggtccctccgtccaa 13018158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattt 193  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 45361365 - 45361246
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||| ||| ||||||||||||||| || ||| || ||  |||||||||||||||||  |||||||||| |||| ||   | | |||    
T  45361365 gactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaacttacaaaatgtc 45361266  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  45361265 aatcaaatcagtccctccgt 45361246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 13039722 - 13039641
Alignment:
Q  142 ctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 223  Q
    ||||| ||||||| |||||||| |||||||   |||||||||| || |||||||| ||||| ||||||||||||||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaatttt 13039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 33038911 - 33038798
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||||||| |||||||| |    |||| ||||||| || || |||| ||| ||||||| | |||||||||||||||| |||||||||||||||       
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  33038811 gtccctccgtccaa 33038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 46996816 - 46996703
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| |    |||||||| |||||| || |||| ||| ||||||| | |||||| ||||||||  |||||||||||||||       
T  46996816 tcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaag 46996717  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  46996716 gtccctccgtccaa 46996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 13034828 - 13034896
Alignment:
Q  288 tgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaa 356  Q
    |||||||| |||||||||| |||||||||| | |||||||||||||||||||||| || || |||||||    
T  13034828 tgcatgctgtgttgtcctgtacacgtgtcatctagtcagccacgtgtacaaggaccaatttcatggaaa 13034896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 45463680 - 45463804
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| |||||||||||||||| |    ||||||||||||||| || |||||  | ||||||| |  ||||||||||||||    |||||||||||| | |    
T  45463680 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 45463779  T
Q  243 gtccctccgtccaaaaagtccgtta 267  Q
    |||||||||||||||| ||||||||    
T  45463780 gtccctccgtccaaaaggtccgtta 45463804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 46439623 - 46439539
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccct 216  Q
    ||||||||| ||||||||||||  |||||||| ||||||||  |||| | |||| | |||||||| |||||||||||||||||||    
T  46439623 agactaatatctcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtccct 46439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 37791657 - 37791744
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 223  Q
    |||||||| || ||||||  | |||||||||||||| ||||||||| || |  |||||||| ||||||||||||||||||| ||||||    
T  37791657 taatacctaaacttcgtctttaaattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttt 37791744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 366763 - 366821
Alignment:
Q  198 aaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    ||||||| | ||||||||||||||| ||||||||| ||||||| | |||||||||||||    
T  366763 aaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtccaa 366821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 339
Target Start/End: Original strand, 11682823 - 11682987
Alignment:
Q  175 caaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtga 274  Q
    |||| ||||| || |||| ||||||||||| | ||||||| ||||||    ||||||||||||| |  ||||||||||||||    || |||| | ||||    
T  11682823 caaaatcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtccaatctctctgttagtggtga 11682922  T
Q  275 tgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaag 339  Q
    ||| ||| ||| ||| ||||| || |||  || |||| ||||| |||||||||||||| ||||||    
T  11682923 tgaggtgtcttcttgaatgctgtgatgtgttgtacacatgtcatcaagtcagccacgtatacaag 11682987  T

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Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 356
Target Start/End: Original strand, 1546343 - 1546510
Alignment:
Q  189 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgacttttt 288  Q
    |||||||| ||||||| |||  |||| |||||||  |  ||||||||||||   |||||||||||||||| |||||||| |  || |||  || ||   |    
T  1546343 aattttgcgaaatatcaattgcgtccttgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 1546442  T
Q  289 gcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaa 356  Q
    ||||| | ||||||| |  | ||||||||  |||  || |||||||||||||||||||||||||||||    
T  1546443 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 1546510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 34691005 - 34691120
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| ||| |||||||||||| |   |||||||||||||||| |  |||||  ||||||||| |  ||||| ||||||||  | |||||||||||| | |    
T  34691005 tcaatttcatccctgaatttttagggatcggccaaattcgtccccaaatttaacaaaatatcaaaatagtctctgaatttgtctgacgtccatcaatttc 34691104  T
Q  243 gtccctccgtccaaaa 258  Q
    |||||||| |||||||    
T  34691105 gtccctccatccaaaa 34691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 252
Target Start/End: Complemental strand, 35344374 - 35344295
Alignment:
Q  173 gccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgt 252  Q
    |||||||||||| || |||| ||| ||||||| ||||| |||||||||||   ||||||||||||||   ||||||||||    
T  35344374 gccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 46810715 - 46810794
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||| |||||||||||||||| |   |||||||||||| ||| || |||| ||| ||||||| ||||| |||||||||||    
T  46810715 tcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaattt 46810794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 2167516 - 2167602
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    |||| ||||||| || || |||| ||| ||||||| | |||||||||||||||  |||||| ||||||||   ||||||||||||||    
T  2167516 tcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtccaa 2167602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 38613568 - 38613503
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||||||||| || || |||| ||| ||||||| | |||||||||||||||  |||||||||||    
T  38613568 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 38613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 267
Target Start/End: Complemental strand, 48303763 - 48303639
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtc-tctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatc 241  Q
    |||| |||||||||||||||| |   ||||| ||||| |||| ||| |||||  ||||||||| |  ||||||||||||||    |||||||||||| |     
T  48303763 tcaatttcgtccctgaattttcagcgatcggtcaaatccgtcctct-aatttaacaaaatatcaaaatagtccctgaatttatttgacgtccatcaattt 48303665  T
Q  242 cgtccctccgtccaaaaagtccgtta 267  Q
    ||||||||||||||||| ||| ||||    
T  48303664 cgtccctccgtccaaaaggtctgtta 48303639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 267
Target Start/End: Complemental strand, 4322686 - 4322562
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| ||||||||||||| || |   |||||||||| ||||| |  |||||  | ||||||| |  ||||||||||||||    ||| |||||||| | |    
T  4322686 tcaatttcgtccctgaatattcagggatcggccaaactcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacatccatcaatttc 4322587  T
Q  243 gtccctccgtccaaaaagtccgtta 267  Q
    |||||||||||||||| ||||||||    
T  4322586 gtccctccgtccaaaaggtccgtta 4322562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 8421453 - 8421505
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  8421453 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 8421505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 31913632 - 31913692
Alignment:
Q  296 ttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaa 356  Q
    |||||||| ||||||||||||  ||||  |||||||||||||||||| || ||||| ||||    
T  31913632 ttgttgtcttgcacacgtgtctacaaggaagccacgtgtacaaggaccaatttgattgaaa 31913692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 46812696 - 46812600
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaa 239  Q
    |||| ||||||| |||||||| |  | |||||||||||| || || ||||  |  ||||||| ||||||||||| |||||  |||||||||||||||    
T  46812696 tcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaa 46812600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 47341800 - 47341712
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    |||||||||||| |||||||| |    |||||||||||| || || |||| ||| ||||||| | |||||||||||||||  |||||||    
T  47341800 tcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 47341712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 133 - 383
Target Start/End: Original strand, 43519424 - 43519674
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | ||||||||||||||||||| |||||    
T  43519424 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 43519523  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||    
T  43519524 catcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgtggcttcttgcatgctttgttgtcatgcacacgtgtcagcaagtcagccatgt 43519623  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttc 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43519624 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttc 43519674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 134 - 385
Target Start/End: Original strand, 49523125 - 49523376
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 233  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||||||||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  234 atcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtg 333  Q
    ||||||   ||||||||||||||||| ||||||| | ||||||||||| ||| ||||||| | ||||||| || |||||||||| |||| || || ||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgtgccttcttgcatgttgtgttgtcttgtacacgtgtcaacaagacaaccgcgtg 49523324  T
Q  334 tacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  49523325 tacaaagactaaattgatggaaatggtaaaaattcgagatttaacttttcag 49523376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 136 - 384
Target Start/End: Complemental strand, 41761867 - 41761619
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   ||||||||||||||||  | ||||| | ||||||||||| | | ||||||||| |||| || || |||||||||| |||| ||| ||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgtgtcctcttgcatgctgtgttctcatgtacacgtgtcaacaaggcagtcacgtgta 41761668  T
Q  336 caaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    |||||||||||| |||||||||||| ||||||| | ||||||| |||||    
T  41761667 caaggactaaatcgatggaaatggtaaaaattcaagatttaacttttca 41761619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 132 - 385
Target Start/End: Original strand, 51011925 - 51012177
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||| |   |||||||||| |||||||||||||||| |||||||||||||||||    
T  51011925 agactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgt 51012024  T
Q  232 ccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacg 331  Q
    ||||||||   ||||||||||||||||  || |||| ||||||||| ||| |   ||||||| | ||||||| || |||||||||| |||| ||||||||    
T  51012025 ccatcaaaatggtccctccgtccaaaagctctgttagtagtgatgacgtgtc-ccttgcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacg 51012123  T
Q  332 tgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||    
T  51012124 tgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcag 51012177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 133 - 384
Target Start/End: Original strand, 41781539 - 41781790
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||||| || | |||||||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| ||    
T  41781539 gactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacatc 41781638  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| |  |||||||||| | | ||||||| | ||||||| || ||  |||||| |||  |||||| ||    
T  41781639 catcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgtgtcctcttgcatgatgtgttgtcatgtacgtgtgtcaacaaagcagccatgt 41781738  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||| |||||||||||||||||||| ||| ||||| ||||||| |||||    
T  41781739 gtacaagaactaaattgatggaaatggtaaaacttcgagatttaacttttca 41781790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 133 - 367
Target Start/End: Original strand, 48813787 - 48814021
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||||||  || |||||||||||||||||| |||||||| ||||||||||| |||||||    
T  48813787 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtc 48813886  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   |||||| |||||||||  || |||  | ||||||||||| | | ||||||| | ||||||| || ||| |||| | |||| |||||||||    
T  48813887 catcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtacatgtgttaacaaggcagccacgt 48813986  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaatt 367  Q
    |||||||||||||||||||||||||||| ||||||    
T  48813987 gtacaaggactaaattgatggaaatggtaaaaatt 48814021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 133 - 378
Target Start/End: Complemental strand, 35404569 - 35404324
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||| |||| | | ||||||||||||||||||| |||||||||  | |||||||| |||||| |||||| |||||||||||||||||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    || ||||   |||| |||||||||||  ||||||| | ||||||| ||| | | || |||| | ||||||| || ||| |||||| |||| |||||||||    
T  35404469 caacaaaatggtccatccgtccaaaagctccgttagtggtgatgacgtgtcctcttccatgttgtgttgtcatgtacatgtgtcaacaagacagccacgt 35404370  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaac 378  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||    
T  35404369 gtacaatgactaaattgatggaaatggtaaaaattcgatatttaac 35404324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 172 - 384
Target Start/End: Original strand, 42980674 - 42980886
Alignment:
Q  172 ggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatag 271  Q
    ||||||||| |||  |||||||| | |||| |||||||||||||| ||||||||||||||||||||||   ||||||||||||||||  || |||| | |    
T  42980674 ggccaaatttgtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtgg 42980773  T
Q  272 tgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgat 371  Q
    |||||||||| | | ||||||| | |||||||||| |||||||||| |||| ||| ||||||||||| |||||||||||||||||| || |||||||||     
T  42980774 tgatgatgtgtcctcttgcatgttgtgttgtcctgtacacgtgtcaacaagacagtcacgtgtacaaagactaaattgatggaaattgtaaaaattcgag 42980873  T
Q  372 atttaacatttca 384  Q
    ||||||| |||||    
T  42980874 atttaacttttca 42980886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 156 - 367
Target Start/End: Complemental strand, 48646848 - 48646637
Alignment:
Q  156 tgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtcca 255  Q
    |||||||| |||| || || |||||||||  ||||||| || |||||||||||||||||||||||||||||||| | |||||||   |||| ||||||||    
T  48646848 tgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccgtcca 48646749  T
Q  256 aaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaa 355  Q
    |||  | ||||| | ||||||||||| | | ||||||| | ||||||| |  |||||||||| |||| || ||||||||||||||||||| |||||||||    
T  48646748 aaagcttcgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcatttacacgtgtcaacaaggcaaccacgtgtacaaggactaatttgatggaa 48646649  T
Q  356 atggtcaaaatt 367  Q
    ||||| ||||||    
T  48646648 atggtaaaaatt 48646637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 136 - 365
Target Start/End: Complemental strand, 2693373 - 2693145
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||| ||||||  |||||||||||||||| ||||||||  |  || |||||||| ||||||||||||||||  ||||||||| | | ||||||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaattttaaa-atgtccat 2693275  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   |||| |||||||| ||  ||| ||| |  |||||||||| | | ||||||||| |||||||||| ||||||||||  ||| ||||||||||||    
T  2693274 caaaatggtccatccgtccataagttccattagtgatgatgatgtgtcatcttgcatgctgtgttgtcctgtacacgtgtcaagaaggcagccacgtgta 2693175  T
Q  336 caaggactaaattgatggaaatggtcaaaa 365  Q
    |||||||||| |||||||||||||| ||||    
T  2693174 caaggactaatttgatggaaatggtaaaaa 2693145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 49524822 - 49524733
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  49524822 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 49524733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 35401749 - 35401868
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||   | | |||    
T  35401749 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtc 35401848  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  35401849 aatcaaatcagtccctccgt 35401868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 4173829 - 4173710
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||   | |||||    
T  4173829 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgtc 4173730  T
Q  233 catcaaatccgtccctccgt 252  Q
     ||||| || ||||||||||    
T  4173729 aatcaactcagtccctccgt 4173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 136 - 367
Target Start/End: Original strand, 11601674 - 11601904
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||||| |||||||| | |||||||| ||||||| | ||||||  || |  ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatcagtcaaatttatccccaaattttgcaaaatatatatt-agtccctgaattttacagacgtccat 11601772  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   ||||||| ||||| ||  | ||||| |  || ||||||| | | |||| || | ||||||| || ||||||||||  ||| ||  ||||||||    
T  11601773 caaaatagtccctctgtccacaagcttcgttagtgatgctgatgtgtcctcttgcgtgttgtgttgtcatgtacacgtgtcaagaaggcaatcacgtgta 11601872  T
Q  336 caaggactaaattgatggaaatggtcaaaatt 367  Q
     ||||||||| |||||||||||||| ||||||    
T  11601873 taaggactaatttgatggaaatggtaaaaatt 11601904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 39345574 - 39345653
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 43507167 - 43507286
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  43507167 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43507266  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  43507267 aatcaaatcagtccctccgt 43507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 43508742 - 43508623
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43508643  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  43508642 aatcaaatcagtccctccgt 43508623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 385
Target Start/End: Complemental strand, 11255926 - 11255812
Alignment:
Q  271 gtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcga 370  Q
    ||||||||||| | | || |||||| ||||||| || |||||||||| |||| |||||||||||||||||||||||||||||||||| || |||||||||    
T  11255926 gtgatgatgtgtcctcttacatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaattgtaaaaattcga 11255827  T
Q  371 tatttaacatttcag 385  Q
     ||||||| ||||||    
T  11255826 gatttaacttttcag 11255812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 20493827 - 20493946
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||||   |||||||||| ||||||||||||||| |||||||||   | | |||    
T  20493827 gactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatttacaaaatgtc 20493926  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  20493927 aatcaaatcagtccctccgt 20493946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 33264382 - 33264501
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||||||||||| | ||||| |||||||||   | | |||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtc 33264481  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  33264482 aatcaaatcagtccctccgt 33264501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 51013975 - 51013856
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||||||||||| | | |||||||||||||   | | |||    
T  51013975 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtc 51013876  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  51013875 aatcaaatcagtccctccgt 51013856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 315
Target Start/End: Complemental strand, 52868250 - 52868091
Alignment:
Q  156 tgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtcca 255  Q
    |||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||| |||||||| ||||||| | ||||||   ||| || ||||||    
T  52868250 tgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaaatggtcacttcgtcca 52868151  T
Q  256 aaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgt 315  Q
    |||  ||||||| | | ||||| ||| | | ||||||||| ||||||| || ||||||||    
T  52868150 aaagctccgttagtggcgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtgt 52868091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 48645252 - 48645336
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 214  Q
    ||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||  |||||||||| |||||||||||||||||    
T  48645252 atagactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcc 48645336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 4169685 - 4169775
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||||||| |||||||| |||||| |  ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  4169685 agactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaattt 4169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 319273 - 319362
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | ||||| |||||||||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 252
Target Start/End: Original strand, 11254123 - 11254238
Alignment:
Q  137 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatc 236  Q
    |||||||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||| ||||| || ||| |||| |||||||   | | ||| |||    
T  11254123 aatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaatttacaaaatgtcaatc 11254222  T
Q  237 aaatccgtccctccgt 252  Q
    ||||| ||||||||||    
T  11254223 aaatcagtccctccgt 11254238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 33266099 - 33265980
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||| ||||||||||| | |||||||| |||||||||| || |||||  ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  33266099 gactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33266000  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  33265999 aatcaaatcagtccctccgt 33265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 320989 - 320903
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaa 219  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||| ||  |||||||||| ||||||| | ||||||| ||||    
T  320989 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaa 320903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 20819986 - 20820075
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 223  Q
    ||||||||||||| ||||||| |||||||| ||||||| | ||||||  |  || ||||||||||||||| |||||||||||||||||||    
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaatttt 20820075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 2691396 - 2691463
Alignment:
Q  156 tgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 223  Q
    |||||||| ||||||| ||||||||||||    |||||||||||||||||||||||||||||||||||    
T  2691396 tgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttt 2691463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 35996100 - 35996186
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    |||| |||||||||| || |||| ||||||||||| ||||| |||||||||||  |||||||||||||||   ||||||||||||||    
T  35996100 tcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtccaa 35996186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 833223 - 833312
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| |  ||||||||||||||    
T  833223 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 833312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 5439736 - 5439647
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| |  ||||||||||||||    
T  5439736 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 52868097 - 52868040
Alignment:
Q  328 cacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||||||||||| |||||| || ||||||| ||||||    
T  52868097 cacgtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcag 52868040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 39083649 - 39083773
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| |||||||||||||||| |    ||||||||||||||| || |||||  | ||||||| |  ||||||||||||||    |||||||||||| | |    
T  39083649 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 39083748  T
Q  243 gtccctccgtccaaaaagtccgtta 267  Q
    |||||||||||||||| ||||||||    
T  39083749 gtccctccgtccaaaaggtccgtta 39083773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 269
Target Start/End: Original strand, 39189392 - 39189518
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| |||||||||||||||| |    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    |||||||||||| | |    
T  39189392 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 39189491  T
Q  243 gtccctccgtccaaaaagtccgttaat 269  Q
    |||||||||||||||| ||||||||||    
T  39189492 gtccctccgtccaaaaggtccgttaat 39189518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 47941848 - 47941930
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgt 252  Q
    |||| ||||||||||||| |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||   ||||||||||    
T  47941848 tcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 5437811 - 5437900
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| |||||||||| || |||||| ||||||| | | ||||||| |  ||||||||||||||    
T  5437811 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5437900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 10372820 - 10372711
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| |    ||||||||||| ||| || |||| ||| ||||||| ||||  |||||||||||  |||||||||||||||       
T  10372820 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaag 10372721  T
Q  243 gtccctccgt 252  Q
    ||||||||||    
T  10372720 gtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 252
Target Start/End: Complemental strand, 44794866 - 44794765
Alignment:
Q  151 gtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctcc 250  Q
    ||||||||||||| | |  |||| |||||||||| || |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||   ||||||||    
T  44794866 gtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctcc 44794767  T
Q  251 gt 252  Q
    ||    
T  44794766 gt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 39921504 - 39921628
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| |||||||||||||||| |    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    |||||||||||| | |    
T  39921504 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 39921603  T
Q  243 gtccctccgtccaaaaagtccgtta 267  Q
    |||||||||||||||| ||||||||    
T  39921604 gtccctccgtccaaaaggtccgtta 39921628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  138 atacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||| || | |||||||| ||||||| | ||| ||||| | |||||||||| ||||||| | |||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 267
Target Start/End: Complemental strand, 43779981 - 43779857
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| |||||||||||||||| |    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    |||||||||||| | |    
T  43779981 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 43779882  T
Q  243 gtccctccgtccaaaaagtccgtta 267  Q
    |||||||||||||||| ||||||||    
T  43779881 gtccctccgtccaaaaggtccgtta 43779857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 835131 - 835012
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||| | |||| |||||||| |||||||| |||| || ||| ||||||| | | ||||||| |  ||||||||||||||   | |||||    
T  835131 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtc 835032  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||  ||||||||||    
T  835031 aatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 42982541 - 42982422
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||| | |||||  ||| |||||||| ||||||| | |||||||||| ||||||||||| |||||  ||||| |||| |||||||   | | |||    
T  42982541 gactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaatttacaaaatgtc 42982442  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  42982441 aatcaaatcagtccctccgt 42982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 44558580 - 44558494
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    |||||||||||| || || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||   |||| |||||||||    
T  44558580 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccttccgtccaa 44558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 5484577 - 5484674
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgtta 267  Q
    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    |||||||||||| | ||||||||||||||||| ||||||||    
T  5484577 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 5484674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 10762591 - 10762700
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| |    ||||||||||| ||| || |||| ||| |||| || ||||  |||||||||||  |||||||||||||||       
T  10762591 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 10762690  T
Q  243 gtccctccgt 252  Q
    ||||||||||    
T  10762691 gtccctccgt 10762700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 256
Target Start/End: Original strand, 7149542 - 7149662
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||| | |||||| ||| |||||||| ||||||| ||| ||||| ||| | |||||||| |||||| |||||  ||| ||||||| ||| | ||| ||    
T  7149542 taatacataaaattcatccttgaattttcaaaaatcagccgaattcatctttaaattttgcgaaatatttatttcatccttgaatttaacataggtcaat 7149641  T
Q  236 caaatccgtccctccgtccaa 256  Q
    ||||   ||||||||||||||    
T  7149642 caaaatggtccctccgtccaa 7149662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 27382292 - 27382340
Alignment:
Q  308 acacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaa 356  Q
    |||||||||| ||||  ||||||||||||||||||||| ||||||||||    
T  27382292 acacgtgtcaacaagaaagccacgtgtacaaggactaatttgatggaaa 27382340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 54387973 - 54387890
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 214  Q
    |||||| |||| || |||||||||| | |||||| ||||||| |||||||| ||  || |||||||| |||||||||||||||||    
T  54387973 atagaccaatatcttaaattcgtccttaaatttttaaaaatcagccaaattagttcct-aattttgcgaaatatctatttagtcc 54387890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 39923088 - 39923009
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||| |||||||||||||||| | |  |||||||| |||||| || |||| ||| ||||||| ||||| |||||||||||    
T  39923088 tcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 39923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 32652136 - 32652233
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgtta 267  Q
    ||||||||||||||| |  |||||  | ||||||| |  |||||| |||||||    |||||||||||| | ||||||||||||||||| ||||||||    
T  32652136 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 32652233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 34460261 - 34460314
Alignment:
Q  169 atcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||| ||||| |||||    
T  34460261 atcggtcaaattcgtctcttaattatgcaaaatatcaatttaatccctaaattt 34460314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 44994374 - 44994277
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgtta 267  Q
    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    |||||||||||| | ||||||||| ||||||| ||||||||    
T  44994374 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgtta 44994277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 27624848 - 27624912
Alignment:
Q  175 caaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaa 239  Q
    ||||||| ||| | |||| ||| ||||||| | |||||||||||||||  |||||||||||||||    
T  27624848 caaattcatctttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 27624912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 44792971 - 44793023
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  44792971 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 44793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 193; Significance: 1e-105; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 3294 - 3546
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| || ||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  3294 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3393  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  3394 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttcttgcatgctttgttgtcctgtacatgtgtcagcaagtcagccacgt 3493  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3494 gtacaaagactaaattgatggaaatggtcaaaattcgatatttaacatttcag 3546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 4466 - 4718
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| || ||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  4466 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4565  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  4566 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttcttgcatgctttgttgtcctgtacatgtgtcagcaagtcagccacgt 4665  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4666 gtacaaagactaaattgatggaaatggtcaaaattcgatatttaacatttcag 4718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 14432 - 14313
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| |||||||||| || |||||| ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  14432 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 14333  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  14332 aatcaaatcagtccctccgt 14313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 1e-97; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 44794208 - 44794459
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| |||| |||||||| ||| || ||||||||||| ||||||| | |||||||||||||||| |||| |||    
T  44794208 gactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtc 44794306  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  44794307 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttcttgcatgctttgttgtcctgtacacgtgtcagcaagtcagccacgt 44794406  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44794407 gtacaaggactaaattgatggaaatggtcaaaatttgatatttaacatttcag 44794459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 133 - 382
Target Start/End: Complemental strand, 3152362 - 3152113
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||  ||| | |||||| ||||||||||||| ||| || ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  3152362 gactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3152263  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||| || |||||||||||||| || |||||||||||||||||||||||||    
T  3152262 catcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttcttacatgctttgttgtcatgtacacgtgtcagcaagtcagccacgt 3152163  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacattt 382  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  3152162 gtacaaggactaaattgatggaaatagtcaaaattcgatatttaaaattt 3152113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 139 - 385
Target Start/End: Original strand, 2660218 - 2660464
Alignment:
Q  139 tacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaa 238  Q
    |||||||||||||||| |||||||| |||||||| |||| |||||| ||||||||||| ||||||| | ||||||| |||||||||||||||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaa 2660317  T
Q  239 atccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaa 338  Q
    || ||||||||||||||||| ||| |||||||  ||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  2660318 attcgtccctccgtccaaaaggtctgttaataacgatgatgtggcttcttgcatgctttgttgtcctctacacgtgtcagcaagtcagccacttgtacaa 2660417  T
Q  339 ggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  2660418 ggactaaattgatggaaattgtcaaaatttgatatttaacatttcag 2660464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 132 - 385
Target Start/End: Complemental strand, 53190904 - 53190652
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  53190904 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 53190805  T
Q  232 ccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacg 331  Q
    ||||||||   ||||||||||||||||  ||||||| | ||||||| ||| |   ||||||| | ||||||| || |||||||||| |||| ||||||||    
T  53190804 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc-ccttgcatgttgtgttgtcttgtacacgtgtcaacaaggcagccacg 53190706  T
Q  332 tgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||||||| |||||| || | ||||| ||||||    
T  53190705 tgtacaaggactaaattgatggaaatggtaaaaatttgagacttaacttttcag 53190652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 133 - 384
Target Start/End: Complemental strand, 27899225 - 27898974
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  27899225 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 27899126  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    ||| |||   ||||||||||||||||  ||||||| | ||||||| ||| | | ||||||| | ||||||| || |||||||||| |||| |||||| ||    
T  27899125 cataaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccatgt 27899026  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||||||||| |||||||||||||| ||||||||| |||| || |||||    
T  27899025 gtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttca 27898974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 131 - 385
Target Start/End: Original strand, 46112485 - 46112739
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||    
T  46112485 tagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacg 46112584  T
Q  231 tccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccac 330  Q
    |||||||||   |||||||||| |||||  |  |||| | ||||||| ||| | | ||||||| | ||||||| || |||||||||| |||||||| |||    
T  46112585 tccatcaaaatggtccctccgttcaaaagctatgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaagtcagtcac 46112684  T
Q  331 gtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||| ||||||||||||||||||||| ||||||| | ||||||| ||||||    
T  46112685 gtgtacaaagactaaattgatggaaatggtaaaaattcaagatttaacttttcag 46112739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 30600062 - 30599810
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| | |||||| | |||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  30600062 gactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtc 30599963  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
     ||||||   ||||||||||||||||  || |||| | ||||||||||| | | ||||||||| ||||||| || |||| |||||  ||| |||||||||    
T  30599962 gatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcttgtacacatgtcaataaggcagccacgt 30599863  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  30599862 gtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcag 30599810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 131 - 385
Target Start/End: Original strand, 17515308 - 17515562
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    |||||||||||||||||||| ||| |||||||| |||||| |||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||    
T  17515308 tagactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacg 17515407  T
Q  231 tccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccac 330  Q
    |||||||||   ||||||| ||||||||   |||||| | ||||||||||| | ||||||||| | ||||||| || |||| |||||  ||| |||||||    
T  17515408 tccatcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgtgtccttttgcatgttgtgttgtcttgtacacttgtcaataaggcagccac 17515507  T
Q  331 gtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||| ||||||    
T  17515508 gtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcag 17515562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 133 - 367
Target Start/End: Original strand, 51684610 - 51684844
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||| ||||||||||||| |||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||    
T  51684610 gactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtc 51684709  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||||||| | | |||| || | |||||||||| |||||||||| |||| ||| |||||    
T  51684710 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcgtgttgtgttgtcctgtacacgtgtcaacaaggcagacacgt 51684809  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaatt 367  Q
    ||||||||||||| |||||||||||||| ||||||    
T  51684810 gtacaaggactaatttgatggaaatggtaaaaatt 51684844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 133 - 370
Target Start/End: Complemental strand, 2226296 - 2226060
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||    |||||||||||||||| || |||| | ||||||| ||| |   ||||||||| ||||||| || |||||||||| ||||  ||||||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggtagccacgt 2226098  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcga 370  Q
    ||||||||||||||||||||||||| ||  ||||||||    
T  2226097 gtacaaggactaaattgatggaaatagtacaaattcga 2226060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 133 - 377
Target Start/End: Original strand, 21348723 - 21348967
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  21348723 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 21348822  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  || |||| | ||||| ||||| | | ||||||| | ||||||| || ||||||||||  ||| | |||||||    
T  21348823 catcaaaatggtccctccgtccaaaagctctgttagtggtgataatgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaataaggcggccacgt 21348922  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaa 377  Q
    |||||| ||||||||||||| ||||||| ||||||||| ||||||    
T  21348923 gtacaaagactaaattgatgaaaatggtaaaaattcgagatttaa 21348967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 23293314 - 23293062
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||||| || | |||||||  ||||||| |||||||||| |  |||||||||| ||||||||||||||||| ||||||||||| |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||||||| | | ||||||| | ||||||| || |||||||||| |||| |||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgt 23293115  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  23293114 gtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcag 23293062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 41977750 - 41978001
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||| || ||||||| | |||||||||||||||||||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    | |||||   ||||||||||||||||  | ||||||| ||||||| ||| |   ||||||| | ||||||| || |||||||||| |||| ||| |||||    
T  41977850 cgtcaaaatggtccctccgtccaaaagcttcgttaatggtgatgacgtgtc-ccttgcatgttgtgttgtcttgtacacgtgtcaacaaggcagtcacgt 41977948  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||| ||||||    
T  41977949 gtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcag 41978001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 54898437 - 54898688
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||     
T  54898437 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 54898536  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||| ||||||||||||  ||||||| |   ||||| ||| |   ||||||| |  |||||| || |||||||||| |||| |||||||||    
T  54898537 catcaaaatggtctctccgtccaaaagctccgttagtgacgatgacgtgtc-ccttgcatgttgcgttgtcttgtacacgtgtcaacaaggcagccacgt 54898635  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||| ||||||    
T  54898636 gtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcag 54898688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 135 - 384
Target Start/End: Original strand, 43765139 - 43765388
Alignment:
Q  135 ctaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcca 234  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||||||  | ||||||||| |||||||||||||||  ||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  235 tcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgt 334  Q
    |||||   |||||||| |||||||  ||||||| | ||||||||||| | | || |||| | ||||||| || |||||||||| |||| |||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtcctcttacatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgt 43765338  T
Q  335 acaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    |||| ||||||||||||||||||||| |||| |||| ||||||| |||||    
T  43765339 acaatgactaaattgatggaaatggtaaaaaatcgagatttaacttttca 43765388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 179 - 385
Target Start/End: Complemental strand, 19987692 - 19987489
Alignment:
Q  179 ttcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgat 278  Q
    |||||| ||||||||||| ||||||| | ||||||||| ||||||||| |||||||||||||| |||||||||||||||| ||| |||| ||||||||||    
T  19987692 ttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgatgat 19987593  T
Q  279 gtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaac 378  Q
    ||| ||| |||||||||    ||||||| |||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19987592 gtggcttcttgcatgct---gtgtcctgtacacatgtcaacaagtcagtcacgtgtacaaggactaaattgatggaaatggtcaaaattcgagatttaac 19987496  T
Q  379 atttcag 385  Q
     ||||||    
T  19987495 gtttcag 19987489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 136 - 367
Target Start/End: Original strand, 42279510 - 42279741
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||||  |||||||| ||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   ||||||||||||||||  || |||| | ||||||||||| | | ||||||| | ||||||| |  |||||||||| |||| ||| ||||||||    
T  42279610 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcttatacacgtgtcaacaaggcagacacgtgta 42279709  T
Q  336 caaggactaaattgatggaaatggtcaaaatt 367  Q
    |||||||||| |||||||||||||| ||||||    
T  42279710 caaggactaatttgatggaaatggtaaaaatt 42279741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 146 - 385
Target Start/End: Complemental strand, 35905843 - 35905605
Alignment:
Q  146 aattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtc 245  Q
    ||||| ||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||   |||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtc 35905744  T
Q  246 cctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaa 345  Q
    |||||||||||||  |||| || | ||||||| ||| |   ||||||| |  |||||| || |||||||||| |||| ||||||||||||||||||||||    
T  35905743 cctccgtccaaaagctccggtagtggtgatgacgtgtc-ccttgcatgatgggttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaa 35905645  T
Q  346 attgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||| || ||||||||| | ||||| ||||||    
T  35905644 attgatggaaattgtaaaaattcgagacttaacttttcag 35905605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 136 - 384
Target Start/End: Original strand, 2377032 - 2377280
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||||||||||||||   |||||||| |||||| | ||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   || |||||||| ||||  ||||||| | ||||||| ||| | | ||||||| | ||||||| || |||||||||| |||| ||||||||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtggtgatgacgtgtcctcttgcatgatgtgttgtcatgtacacgtgtcaacaaggcagccacgtgta 2377231  T
Q  336 caaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
      |||||||| |||||||||||||| ||||||||| |||| || |||||    
T  2377232 ataggactaatttgatggaaatggtaaaaattcgagatttgacttttca 2377280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 163 - 384
Target Start/End: Original strand, 46197750 - 46197971
Alignment:
Q  163 taaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtc 262  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||   |||||| |||||||||  ||    
T  46197750 taaaaactcggtcaaattcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttc 46197849  T
Q  263 cgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtca 362  Q
    ||||| |  |||||||||  | | ||||||| | ||||||  ||  ||||||||| |||| |||| |||||||||||||||||||||||||||||||| |    
T  46197850 cgttagtgatgatgatgtttcctcttgcatgttgtgttgttatgtgcacgtgtcaacaaggcagctacgtgtacaaggactaaattgatggaaatggtaa 46197949  T
Q  363 aaattcgatatttaacatttca 384  Q
    ||||||||  |||||| |||||    
T  46197950 aaattcgagctttaacttttca 46197971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 385
Target Start/End: Complemental strand, 44276266 - 44276088
Alignment:
Q  207 tttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctg 306  Q
    |||||||| ||||||||||||||| ||||||||   ||||||||||||||||  || |||| | ||||||||||| | | || |||| | ||| ||| ||    
T  44276266 tttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttacatgttgtgtcgtcatg 44276167  T
Q  307 cacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
     |||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  44276166 tacacgtgtcaacaagacagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcag 44276088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 198 - 367
Target Start/End: Complemental strand, 48830885 - 48830716
Alignment:
Q  198 aaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgcttt 297  Q
    ||||||||||||||||  |||||||||| |||||||||||||   ||||||||||||||||  || |||| | ||||||||||| | | ||||||| | |    
T  48830885 aaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgttgt 48830786  T
Q  298 gttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaatt 367  Q
    |||||| || |||||||||| |||| || ||||||||||||||||||| |||||||||||||| ||||||    
T  48830785 gttgtcatgtacacgtgtcaacaaggcaaccacgtgtacaaggactaatttgatggaaatggtaaaaatt 48830716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 23291569 - 23291689
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||   | | ||    
T  23291569 agactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgt 23291668  T
Q  232 ccatcaaatccgtccctccgt 252  Q
    | |||||||| ||||||||||    
T  23291669 caatcaaatcagtccctccgt 23291689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 600725 - 600961
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||| ||| ||||||||||||||||| ||||||| ||   |||||||| ||||||||||||||||||                |||    
T  600725 gactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc----------------gtc 600808  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||| ||||  ||||||| | ||||||| ||| | | ||||||| | ||||||| || |||||||||| |||  |||||||||    
T  600809 catcaaaatggtccctccgtctaaaagctccgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaagcagccacgt 600908  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||| ||||||||||| |||||| || ||||||| ||||||    
T  600909 gtacaaggactaaattaatggaaatggtaaaaatttgagatttaacttttcag 600961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 211 - 385
Target Start/End: Complemental strand, 7884939 - 7884766
Alignment:
Q  211 gtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcaca 310  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||  ||||||| | |||||||  || |  || ||||| | ||||||| || |||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatgacatgtccctt-gcatgttgtgttgtcttgtaca 7884841  T
Q  311 cgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||| |||| ||||||| |||| |||||||||||||||||||||||| ||||||||| | ||||| ||||||    
T  7884840 cgtgtcaacaaggcagccacatgtataaggactaaattgatggaaatggtaaaaattcgagacttaacttttcag 7884766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 252
Target Start/End: Complemental strand, 2379071 - 2378953
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 233  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||| |||||||   | | |||     
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtca 2378972  T
Q  234 atcaaatccgtccctccgt 252  Q
    |||||||| ||||||||||    
T  2378971 atcaaatcagtccctccgt 2378953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 611314 - 611222
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||| | ||||| |||||||| ||||||||||    
T  611314 atagactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaattt 611222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 38193601 - 38193510
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  38193601 tagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 44267981 - 44268100
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||| |||||| |||| |||||||   | | |||    
T  44267981 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaaatgtc 44268080  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  44268081 aatcaaatcagtccctccgt 44268100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 46308807 - 46308926
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46308906  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  46308907 aatcaaatcagtccctccgt 46308926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 41979441 - 41979352
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  41979441 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 53094362 - 53094273
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  53094362 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

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Target: chr3; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 3150249 - 3150341
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  3150249 atagactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

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Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 54900163 - 54900044
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | || ||||||||||||   | | |||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtc 54900064  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  54900063 aatcaaatcagtccctccgt 54900044  T

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Target: chr3; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 42282559 - 42282473
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||| |||||||| ||||||| | ||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaattt 42282473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 38191895 - 38192014
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| | |||||| |||||| |||||| |||||| ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38191994  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  38191995 aatcaaatcagtccctccgt 38192014  T

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Target: chr3; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 53187742 - 53187861
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||||| |||| |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  53187742 gactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53187841  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  53187842 aatcaaatcagtccctccgt 53187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 46310526 - 46310436
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||||||  |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  46310526 agactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 30598337 - 30598426
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||| ||| ||||||||||| ||||| |||||| |||| |||||||    
T  30598337 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaattt 30598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 35903825 - 35903914
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||| |||| |||||||| ||||||| ||||| ||| || ||||||||||||||||||| | |||||||||||||||    
T  35903825 gactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 46611392 - 46611273
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||  | ||| |||||| ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtc 46611293  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  46611292 aatcaaatcagtccctccgt 46611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 21350697 - 21350575
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 229  Q
    ||||||||||||||||||||| ||| ||| ||||  ||||||||||||||||||  ||||||||||| ||||| |||||| |||| |||||||   | |     
T  21350697 atagactaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaatttacaaaat 21350598  T
Q  230 gtccatcaaatccgtccctccgt 252  Q
    ||| |||||||| ||||||||||    
T  21350597 gtcaatcaaatcagtccctccgt 21350575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 54412633 - 54412547
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||| ||||||||||||| ||||||||||||||| || ||||||||||  |||||||||| | ||||||||||||| |||||||||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaattt 54412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaatttt 194  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| |||||||||| || |||||  ||||||||||| ||||||| | ||||||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 46609149 - 46609238
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||| ||||||||||| | |||||||| ||||||||||||| |||||| ||||||||||  ||||||| | |||||||||||||||    
T  46609149 gactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 51686483 - 51686402
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 214  Q
    |||||||||||||||||||||| | |||||| ||||||| |||||||||||| || |||||||| |||||| ||||||||||    
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcc 51686402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 23774162 - 23774258
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaa 239  Q
    |||||||||||| |||||||| |  | ||||||||||||||| || |||| ||| ||||||| |||||||||||||||||  |||||||||||||||    
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaa 23774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 53092623 - 53092742
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||  | |||||| |||||| |||||| |||||| ||||||||||| ||||||| | ||| |||||||||||   | | |||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtc 53092722  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  53092723 aatcaaatcagtccctccgt 53092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 48829356 - 48829437
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 214  Q
    |||||||||||||||||||||| |||||||| |||| || ||||||||  |  ||||||||||| |||||||||||||||||    
T  48829356 gactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcc 48829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 2661992 - 2661908
Alignment:
Q  138 atacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||||||  |||||||||| ||||||| | ||||||| |||||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaattt 2661908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 23888886 - 23888772
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| | |  |||||||| |||||| || |||| ||| |||||||   |||||||||||||||  || ||||||||||||       
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  243 gtccctccgtccaaa 257  Q
    |||||||||||||||    
T  23888786 gtccctccgtccaaa 23888772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 46114195 - 46114105
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaa-tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||| |||||||||||  ||| |||||||||||||| ||||||||||| |||  |||||||||| ||||||||||||||||  |||||||    
T  46114195 gactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaattt 46114105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 7883328 - 7883417
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||| ||||||  |||||||| ||||||||||||| |||||| || |||||||  ||||||| | ||||| |||||||||    
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaattt 7883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 17517052 - 17516943
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||||||| |||||||| ||||||||| |||||||||   |||||||||| |||||  ||||| |||| |||||||   | | ||| ||||||||     
T  17517052 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatca 17516953  T
Q  243 gtccctccgt 252  Q
    ||||||||||    
T  17516952 gtccctccgt 17516943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 28626411 - 28626500
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||| | | ||||||| |  ||||||||||||||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 28626500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 40509025 - 40508912
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||||||| |||||||| |    ||||||||||||||| || |||| ||| ||||||| | ||| ||| |||||||  |||||||||||||||       
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  40508925 gtccctccgtccaa 40508912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 45898462 - 45898349
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| | |  ||| |||| || ||| ||||||| ||| ||||||| | ||||||| |||||||  |||||||| ||||||       
T  45898462 tcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaag 45898363  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  45898362 gtccctccgtccaa 45898349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 48633887 - 48634000
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||||||| |||||||| |    |||| ||||||||||  | |||| ||| ||||||| | |||||||||||||||  |||||||||||||||       
T  48633887 tcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 48633986  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  48633987 gtccctccgtccaa 48634000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 2977443 - 2977347
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaa 239  Q
    |||||||||||| |||||||| |  |||||||||||||| || || |||| ||| ||||||| ||| ||||||| |||||  || ||||||||||||    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaa 2977347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 1845840 - 1845907
Alignment:
Q  189 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    |||| ||||||||||| | ||||||  ||||||| ||||||||||||||||  |||||||||||||||    
T  1845840 aattatgcaaaatatcaacttagtctttgaatttgacagacgtccatcaaaaacgtccctccgtccaa 1845907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 27897151 - 27897239
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||| | | | ||||||||||||| |  ||||||||||  |||||||||| || || |||||||||| ||||||||    
T  27897151 gactaatacctcaaattctttcttaaattttaaaaaatggatcaaattcgtccatgaattttgc-aattagctatttagtctctgaattt 27897239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 35572610 - 35572525
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatt 221  Q
    |||||| | |||||||||| ||||||||||||||| |   ||||| ||  |||||||||| |||||| ||||||||||| ||||||    
T  35572610 taatactttaaattcgtccttgaattttaaaaaattgattaaatttgttcctgaattttgaaaaatagctatttagtccttgaatt 35572525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 252
Target Start/End: Complemental strand, 41021117 - 41021008
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| |    ||||||||||| ||| || |||| ||| |||| || ||||  |||||||||||  |||||||||||||||       
T  41021117 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 41021018  T
Q  243 gtccctccgt 252  Q
    ||||||||||    
T  41021017 gtccctccgt 41021008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 25535298 - 25535250
Alignment:
Q  208 ttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    ||||||||||||||| ||||||||||| ||||| | |||||||||||||    
T  25535298 ttagtccctgaatttaacagacgtccaccaaattcatccctccgtccaa 25535250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 48635454 - 48635375
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||| |||||||||||||||| |   ||||| |||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  48635454 tcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 48635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 23877037 - 23876979
Alignment:
Q  198 aaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    ||||||| | |||||| |||||||| ||| ||||||||||||| | |||||||||||||    
T  23877037 aaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtccaa 23876979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 45257307 - 45257221
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    |||||||||||| || || |||| || |||||||| | ||||| |||||||||  ||||||||||| |||   ||||||||||||||    
T  45257307 tcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgtcagacgtccataaaaaatgtccctccgtccaa 45257221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 18430385 - 18430272
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||||||| ||||||||||    || ||||||||| || || |||| ||| ||||||| | ||||||||||||| |  ||||||||||  |||       
T  18430385 tcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtcagacgtccaataaaaag 18430286  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  18430285 gtccctccgtccaa 18430272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 26282662 - 26282629
Alignment:
Q  95 attatcatgtataagaagaaattaaaagaaatat 128  Q
    |||||||||||||| |||||||||||||||||||    
T  26282662 attatcatgtataataagaaattaaaagaaatat 26282629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 43767108 - 43767075
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaatttt 163  Q
    ||||||||||||||||||||| ||||||||||||    
T  43767108 atagactaatacctcaaattcatccctgaatttt 43767075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 1847699 - 1847647
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||| || || |||| ||||||||||| ||||| |||||||||||    
T  1847699 tcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaattt 1847647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 33051515 - 33051467
Alignment:
Q  174 ccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||| ||||| || |||||||||||||||| |||| ||||||||||||    
T  33051515 ccaaaatcgtccctaaattttgcaaaatatcaatttcgtccctgaattt 33051467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 178; Significance: 7e-96; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 24541336 - 24541083
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||  |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  24541336 gactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 24541237  T
Q  233 catcaaatccgtc-cctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacg 331  Q
    |||||||| | || ||||||||||||| |||  ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||     
T  24541236 catcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgtggcttcttgcatgctttgttgtcctgtacacgtgtcagcaagtcagccaca 24541137  T
Q  332 tgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24541136 tgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 24541083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 132 - 385
Target Start/End: Complemental strand, 2854451 - 2854200
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||| | ||| ||| | ||||||||||||||||||||||||    
T  2854451 agactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgt 2854353  T
Q  232 ccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacg 331  Q
    ||| ||||| ||||||||||||||||| |||| ||||||||||||||||| ||| |||||||||| |||||| || ||||||||||||||||||||||||    
T  2854352 ccaacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgtggcttcttgcatgctt-gttgtcttgtacacgtgtcagcaagtcagccacg 2854254  T
Q  332 tgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2854253 tgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 2854200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 17574318 - 17574569
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  17574318 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 17574417  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| ||| |   ||||||||| ||||||| || |||||||||| |||| |||||||||    
T  17574418 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgt 17574516  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||| ||||||    
T  17574517 gtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcag 17574569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 130 - 383
Target Start/End: Original strand, 34327632 - 34327885
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 229  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  34327632 atagactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagac 34327731  T
Q  230 gtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagcca 329  Q
    ||||||||||   ||| ||||||||||||  || |||| | ||||||||||| | | ||||||| |  |||||| || |||||||||| |||| ||||||    
T  34327732 gtccatcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgttgcgttgtcatgtacacgtgtcaacaaggcagcca 34327831  T
Q  330 cgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttc 383  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  34327832 cgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttc 34327885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 133 - 384
Target Start/End: Original strand, 7267843 - 7268093
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  7267843 gactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtc 7267942  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||    |||||||||||||||  ||||||| | ||||||| ||| |   | ||||| | ||||||| || |||||||||| |||| |||||||||    
T  7267943 catcaaaatgatccctccgtccaaaagctccgttagtggtgatgacgtgtc-cctcgcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgt 7268041  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||||||||||||||||||||| || ||||||||| | ||||| |||||    
T  7268042 gtacaaggactaaattgatggaaattgtaaaaattcgaaacttaacttttca 7268093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 30468404 - 30468152
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||| ||||||||| ||||||| ||||||||||||||| || ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  30468404 gactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtc 30468305  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| ||| | | ||||||| | ||||||| || |||||||||| |||| || ||||||    
T  30468304 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcaaccacgt 30468205  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||| |||||||||||||| |||||| || ||||||| ||||||    
T  30468204 gtacaaggactaatttgatggaaatggtaaaaatttgagatttaacttttcag 30468152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 133 - 344
Target Start/End: Complemental strand, 36057737 - 36057526
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  36057737 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtc 36057638  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||||| ||||||||||| | | ||||||| | ||||||| || |||||||||| |||| ||||||| |    
T  36057637 catcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgtgtcatcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacat 36057538  T
Q  333 gtacaaggacta 344  Q
    ||||||||||||    
T  36057537 gtacaaggacta 36057526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 136 - 385
Target Start/End: Complemental strand, 18625129 - 18624880
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||||| |||||||| |   ||| || ||||||||| ||||||||||  |||||||||||||||||||||||||||||  |||||||    
T  18625129 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 18625030  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   |||| |||||||||||  ||||||| ||||||||||||| ||| ||||||| | ||||||| |  |||||||||| |||| || |||||||||    
T  18625029 caaaatggtccttccgtccaaaagctccgttagtagtgatgatgtgtcttcttgcatgttgtgttgtcttatacacgtgtcaacaaggcaaccacgtgta 18624930  T
Q  336 caaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||| |||||||||||||| ||||||||| ||||||| ||||||    
T  18624929 caaggactaatttgatggaaatggtaaaaattcgagatttaacttttcag 18624880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 8539675 - 8539927
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| |||||||   |||||||||   |||||||||| ||||||||||||||||||||||||||||| |||||    
T  8539675 gactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 8539774  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||| |||| |||||||  ||||||| |  ||||| |||| | | ||||||| | ||||||| || |||||||||| |||| |||||||||    
T  8539775 catcaaaatagtcgctccatccaaaagctccgttagtgttgatggtgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgt 8539874  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    || ||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  8539875 gtgcaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcag 8539927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 132 - 365
Target Start/End: Original strand, 2179786 - 2180019
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||  ||||||||||||| |||||||||||||||||| |    
T  2179786 agactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacat 2179885  T
Q  232 ccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacg 331  Q
    ||||||||   ||||||||||||||||  ||| ||| | |||||||  || | | ||||||| | ||||||| || |||||||||| |||| |||||||     
T  2179886 ccatcaaaatggtccctccgtccaaaagctccattagtggtgatgacatgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccaca 2179985  T
Q  332 tgtacaaggactaaattgatggaaatggtcaaaa 365  Q
    |||||||||||||| |||||| ||||||| ||||    
T  2179986 tgtacaaggactaatttgatgaaaatggtaaaaa 2180019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 132 - 281
Target Start/End: Complemental strand, 29621906 - 29621757
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    |||||||||||||||| | |||  |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||| |||||||    
T  29621906 agactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgt 29621807  T
Q  232 ccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  29621806 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 29621757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 133 - 281
Target Start/End: Complemental strand, 42473731 - 42473583
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| |  ||||||||||||||||||||||||    
T  42473731 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtc 42473632  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    ||||||||| |||| ||||||||||| ||||||||| ||||||||||||    
T  42473631 catcaaatcagtccttccgtccaaaatgtccgttaacagtgatgatgtg 42473583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 136 - 281
Target Start/End: Original strand, 40780553 - 40780698
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||| || ||||||||    
T  40780553 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 40780652  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    |||||| |||||||||||||||| ||||||||| ||||||||||||    
T  40780653 caaatcagtccctccgtccaaaatgtccgttaacagtgatgatgtg 40780698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 12738825 - 12738706
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||   | | |||    
T  12738825 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12738726  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  12738725 aatcaaatcagtccctccgt 12738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 12801648 - 12801529
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||   | | |||    
T  12801648 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12801549  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  12801548 aatcaaatcagtccctccgt 12801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 8541360 - 8541241
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||   | | |||    
T  8541360 gactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaatgtc 8541261  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  8541260 aatcaaatcagtccctccgt 8541241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 2852885 - 2853005
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||| ||||||| | ||||| |||||||||   | | ||    
T  2852885 agactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgt 2852984  T
Q  232 ccatcaaatccgtccctccgt 252  Q
    | |||||||| ||||||||||    
T  2852985 caatcaaatcagtccctccgt 2853005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 34328919 - 34328827
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||  |||||||||||||||| |||||| |||| |||||||    
T  34328919 atagactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaattt 34328827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 7269535 - 7269446
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||  ||||||||||||||||||| || |||||| ||||||||||| ||||||| | |||||||||||||||    
T  7269535 gactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 32134231 - 32134320
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||| |||  |||||||| |||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  32134231 gactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 28813856 - 28813765
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaa--tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| ||||||| ||||||  | |||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  28813856 gactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 29621757 - 29621694
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  29621757 gtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcag 29621694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 21843083 - 21842962
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    |||||||||||||||||||||||| |||||||| ||||||||| ||| || |||  |||||||||| ||||||| | |||||||||||||||   | | |    
T  21843083 tagactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatg 21842984  T
Q  231 tccatcaaatccgtccctccgt 252  Q
    || |||||||| ||||||||||    
T  21842983 tcaatcaaatcagtccctccgt 21842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 252
Target Start/End: Complemental strand, 17578022 - 17577905
Alignment:
Q  135 ctaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcca 234  Q
    |||||||||||||||||||| |||||||| ||||||||||| | ||| || ||||||||||||||||||| | ||||| | |||||||   | | ||| |    
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaa 17577923  T
Q  235 tcaaatccgtccctccgt 252  Q
    ||||||| ||||||||||    
T  17577922 tcaaatcagtccctccgt 17577905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 40782300 - 40782211
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  40782300 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 40782211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 12737313 - 12737389
Alignment:
Q  308 acacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||||||| ||||||||| |||| || |||||    
T  12737313 acacgtgtcaacaagacagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttca 12737389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 136 - 252
Target Start/End: Complemental strand, 28822176 - 28822060
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||||| |||||||| |||||| || |||||||||| ||||||||||| ||||  |||||| |||| |||||||   | | ||| ||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaat 28822077  T
Q  236 caaatccgtccctccgt 252  Q
    |||||| ||||||||||    
T  28822076 caaatcagtccctccgt 28822060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 370
Target Start/End: Original strand, 28819397 - 28819524
Alignment:
Q  243 gtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggac 342  Q
    ||||||||||||||||  ||||||| |  |||||||||| | | || |||| | || |||| || |||||||||| |||| || ||||||| ||||||||    
T  28819397 gtccctccgtccaaaagctccgttagtgatgatgatgtgtcctcttacatgatgtgatgtcatgtacacgtgtcaacaaggcaaccacgtgcacaaggac 28819496  T
Q  343 taaattgatggaaatggtcaaaattcga 370  Q
    |||||||||| ||||||| |||||||||    
T  28819497 taaattgatgaaaatggtaaaaattcga 28819524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 40780698 - 40780761
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||    
T  40780698 gtcagccacgtgtacagggactaaactgatggaaattgtcaaaatttgatatttaacatttcag 40780761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 42473583 - 42473520
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||||    
T  42473583 gtcagccacgtgtacaaggactaaactgatggaaatggtcaaaattcaaaaattaacatttcag 42473520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 41493841 - 41493963
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 229  Q
    ||||| ||||||||||| ||||||| |||||||| ||||||| ||||||||||||    |||||||  ||||||||||||||||| ||||| ||  | |     
T  41493841 atagagtaatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaatattcaaaat 41493940  T
Q  230 gtccatcaaatccgtccctccgt 252  Q
    ||| ||||||||||||| |||||    
T  41493941 gtcaatcaaatccgtccatccgt 41493963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 18728716 - 18728603
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| |    |||||||| |||||| || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||       
T  18728716 tcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 18728617  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  18728616 gtccctccgtccaa 18728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 29620138 - 29620227
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||| ||||||||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaattt 29620227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttta 224  Q
    |||||||||| | | |||||| ||||||| ||||| ||| || ||||||||||| |||||||||||||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 384
Target Start/End: Original strand, 12800136 - 12800212
Alignment:
Q  308 acacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||| |||||| ||||||||| |||| || |||||    
T  12800136 acacgtgtcaacaagacagccacgtgtacaaggactaatttgatggcaatggtaaaaattcgagatttgacttttca 12800212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 384
Target Start/End: Original strand, 21841182 - 21841242
Alignment:
Q  324 cagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  21841182 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttca 21841242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 32135779 - 32135721
Alignment:
Q  327 ccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||||||    
T  32135779 ccacgtgtacaaggactaaattgatggaaatagtaaaaattcgagatttaacttttcag 32135721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 35395343 - 35395456
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||| |||||||||||| | |  |||||||| |||||| || |||| ||| ||||||| ||||||| |||||||||   ||||||||||||||       
T  35395343 tcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaag 35395442  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  35395443 gtccctccgtccaa 35395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 32087524 - 32087637
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| |    |||  ||| |||||| || |||| ||| ||||||| | ||||||||| |||||| |||||||||||||||       
T  32087524 tcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaag 32087623  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  32087624 gtccctccgtccaa 32087637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 42471546 - 42471607
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaatt 192  Q
    ||||||||||||||||| | |||| |||||||| ||||||||||||| |||||| |||||||    
T  42471546 tagactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatt 42471607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 38596878 - 38596974
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaa 239  Q
    |||||||||||| |||||||| |    ||||||||||||||| || |||| ||| ||||||| | |||||||||||||||   ||||||||||||||    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaa 38596974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 27075876 - 27075939
Alignment:
Q  189 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgt 252  Q
    |||||| ||||||||| | ||||| ||||||||| ||||||||||||||||| | |||||||||    
T  27075876 aatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaattcatccctccgt 27075939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 43318174 - 43318061
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||||||| |||||||| |    ||||||||| || || || |||| ||| ||||||| | |||||||||||||||  ||||||||||| |||       
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  43318074 gtccctccgtccaa 43318061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 356
Target Start/End: Original strand, 27349338 - 27349369
Alignment:
Q  325 agccacgtgtacaaggactaaattgatggaaa 356  Q
    ||||||||||||||||||||||||||||||||    
T  27349338 agccacgtgtacaaggactaaattgatggaaa 27349369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 33256410 - 33256523
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| | |  |||||||| ||| ||  | |||| ||| ||||||| | ||| ||  |||||||  |||||||||||||||       
T  33256410 tcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgtccatcaaaaaa 33256509  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  33256510 gtccctccgtccaa 33256523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 3e-95; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 46583680 - 46583428
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| || ||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  46583680 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 46583581  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    ||||||||  |||||||||||||||| |||||||||| ||||||||||| ||| ||||||||||| ||||| || |||||||||||||||||||||||||    
T  46583580 catcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgtggcttcttgcatgctttcttgtcatgtacacgtgtcagcaagtcagccacgt 46583481  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46583480 gtacaaggactaaattgatgaaaatggtcaaaattcgatatttaacatttcag 46583428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 136 - 385
Target Start/End: Complemental strand, 33602765 - 33602516
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||  ||||||| | |||||||||||||||||||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    |||||  |||||||||||||||| |||||||| || |||||||||| ||| ||||||| | ||||||| || |||||||||||||||||||||| |||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatgatgatgtggcttcttgcatgttgtgttgtcttgtacacgtgtcagcaagtcagccatgtgta 33602566  T
Q  336 caaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  33602565 caaggactaaattgatggaaatagtcaaaattcgagatttaacatttcag 33602516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 31238619 - 31238367
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  31238619 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 31238520  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   |||| || ||||||||  ||||||| | ||||||| ||| | | || |||||| ||||||| || |||||||||| |||| |||||||||    
T  31238519 catcaaaatggtccatctgtccaaaagctccgttagtggtgatgacgtgtcctcttccatgctgtgttgtcatgtacacgtgtcaacaaggcagccacgt 31238420  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||| ||||||    
T  31238419 gtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcag 31238367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 6818802 - 6818550
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||    
T  6818802 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtc 6818703  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | |||||||  || | | ||||||| | ||||||| || |||||||||| |||| |||||||||    
T  6818702 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacatgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgt 6818603  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||| ||||| |||||||| |||||| || ||||||| ||||||    
T  6818602 gtacaaggactaatttgatagaaatggtaaaaatttgagatttaacttttcag 6818550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 133 - 384
Target Start/End: Complemental strand, 25278492 - 25278241
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||| ||||||||||| |||||    
T  25278492 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtc 25278393  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| ||| | | ||||||| | || |||| || |||||||||| |||| |||||||||    
T  25278392 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgatgtgctgtcatgtacacgtgtcaacaaggcagccacgt 25278293  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||| |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  25278292 gtataaggactaaattgatggaaatggtaaaaattcgagatttaacttttca 25278241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 133 - 384
Target Start/End: Original strand, 37344342 - 37344593
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||  ||||||||||| |||||    
T  37344342 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtc 37344441  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| ||| | | ||||||| | ||||||| || |||||||||| |||| |||||||||    
T  37344442 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgatgtgttgtcatgtacacgtgtcaacaaggcagccacgt 37344541  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||| |||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  37344542 gtataaggactaaattgatggaaatggtaaaaattcgagatttaacttttca 37344593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 132 - 385
Target Start/End: Original strand, 2869578 - 2869831
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||| || ||||||||||||||    
T  2869578 agactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgt 2869677  T
Q  232 ccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacg 331  Q
    ||||||||   ||||||||||||||||  || |||| | ||||||||||| | | ||||||| | |||||||||| |||||||||| |||| |||||||     
T  2869678 ccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcatcttgcatgatgtgttgtcctgtacacgtgtcaacaaggcagccaca 2869777  T
Q  332 tgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||| || |||||| || |||| || ||||||    
T  2869778 tgtacaaggactaaattgatggaaatagtaaaaatttgagatttgacttttcag 2869831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 4856090 - 4855839
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  4856090 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4855991  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||||| ||||||| ||| |   ||||||| | ||||||| || |||||||||| |||| ||| |||||    
T  4855990 catcaaaatggtccctccgtccaaaagctccgttaatggtgatgacgtgtc-ccttgcatgttgtgttgtcttgtacacgtgtcaacaaggcagtcacgt 4855892  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||| |||||| || | ||||| ||||||    
T  4855891 gtacaaggactaaattgatggaaatggtaaaaatttgagacttaacttttcag 4855839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 131 - 385
Target Start/End: Complemental strand, 34778264 - 34778011
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||||||||||||||||| |    
T  34778264 tagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatg 34778165  T
Q  231 tccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccac 330  Q
    |||||||||   ||||||||||||||||  ||||||| | ||||||| ||| |   ||||||  | ||||||| || |||||||||| |||| |||||||    
T  34778164 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc-ccttgcatattgtgttgtcttgtacacgtgtcaacaaggcagccac 34778066  T
Q  331 gtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||    
T  34778065 gtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcag 34778011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 133 - 384
Target Start/End: Original strand, 27087283 - 27087533
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  27087283 gactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 27087382  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   | || |||||||||||  ||||||| | ||||||||||| |   ||||||||| ||||||| || |||||||||| |||| |||||||||    
T  27087383 catcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgt 27087481  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||||||| |||||||||||||||| ||||||||| | ||||| |||||    
T  27087482 gtacaaggactgaattgatggaaatggtaaaaattcgagacttaacttttca 27087533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 131 - 384
Target Start/End: Complemental strand, 50556223 - 50555970
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    |||||||||| ||||||||||||  |||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  50556223 tagactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacg 50556124  T
Q  231 tccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccac 330  Q
    || ||||||   ||||||||||||||||  ||||||| | ||||||  ||| | | ||||||||| ||||||| || |||||||||| ||||  || |||    
T  50556123 tctatcaaaatggtccctccgtccaaaagctccgttagtggtgatggcgtgtcatcttgcatgctgtgttgtcatgtacacgtgtcaacaagggagtcac 50556024  T
Q  331 gtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||| || |||||    
T  50556023 gtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttca 50555970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 3013600 - 3013342
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||||||| ||| | ||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  3013600 gactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtc 3013501  T
Q  233 ------catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcag 326  Q
          |||||||   ||||||||||||||||  ||||||| | ||||||||||  | | ||||||||  ||||||| || |||||||||| |||| |||    
T  3013500 catggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtatcctcttgcatgccgtgttgtcatgtacacgtgtcaacaaggcag 3013401  T
Q  327 ccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||||||||| |||||| || ||||||| ||||||    
T  3013400 ccacgtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcag 3013342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 173 - 385
Target Start/End: Original strand, 15104481 - 15104693
Alignment:
Q  173 gccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagt 272  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||| |||||||||||  ||| ||| | ||    
T  15104481 gccaaattcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggt 15104580  T
Q  273 gatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgata 372  Q
    ||||||||| ||| ||||||||| ||||||| || ||||||||||  ||| |||||||||||||||||||||| |||||||||||||| ||||||||| |    
T  15104581 gatgatgtgtcttcttgcatgctgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgaga 15104680  T
Q  373 tttaacatttcag 385  Q
    |||||| ||||||    
T  15104681 tttaacttttcag 15104693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 131 - 281
Target Start/End: Complemental strand, 9121794 - 9121644
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    ||||||||||||||||| | |||| |||||||| ||||||||||||| |||||| || |||||| | ||||||| | |||||||||||||||| ||||||    
T  9121794 tagactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacg 9121695  T
Q  231 tccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  9121694 tccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 9121644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 132 - 281
Target Start/End: Complemental strand, 47013207 - 47013058
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    |||||||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||| || ||||    
T  47013207 agactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgt 47013108  T
Q  232 ccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  47013107 ccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgtg 47013058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 133 - 294
Target Start/End: Complemental strand, 51896276 - 51896115
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||| ||||||||||| ||||| | |||||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||    
T  51896276 gactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtc 51896177  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgc 294  Q
    |||||||   ||||||||||||||||  || |||| | ||||||||||| | | ||||||||    
T  51896176 catcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgc 51896115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 25279077 - 25278975
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||||||  || |||||||| |||||||||||||||||||||||||||||||||||    
T  25279077 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtc 25278978  T
Q  233 cat 235  Q
    |||    
T  25278977 cat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 8167940 - 8168029
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaat 220  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||    
T  8167940 tagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 31236819 - 31236908
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||| |||||||||    
T  31236819 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 50554164 - 50554252
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||| ||||||||| |||||||||    
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaattt 50554252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 136 - 367
Target Start/End: Complemental strand, 52643736 - 52643510
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||||| | |||||| ||||||| |  ||||||||| ||||||||||| |||||| |||||||||||||||||||| | |||    |    
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttataaacg----t 52643641  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    || ||  ||| ||||||||||||  ||||||| | |||||||||||   | |||| |  | |||||||||| |||| ||||| |||  ||| ||||||||    
T  52643640 cagat-ggtctctccgtccaaaagctccgttagtggtgatgatgtgttctcttgcgtattgtgttgtcctgtacacatgtcaacaatgcagtcacgtgta 52643542  T
Q  336 caaggactaaattgatggaaatggtcaaaatt 367  Q
    ||| |||||| ||||||||| |||| ||||||    
T  52643541 caatgactaatttgatggaactggtaaaaatt 52643510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 8169657 - 8169568
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| ||||||||| | |||||||||||||||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaattt 8169568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 46582009 - 46582129
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||   | | ||    
T  46582009 agactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 46582108  T
Q  232 ccatcaaatccgtccctccgt 252  Q
    | |||||||| ||||||||||    
T  46582109 caatcaaatcagtccctccgt 46582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 52641887 - 52641969
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 214  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||||||||||| |||||| ||||||||||    
T  52641887 agactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtcc 52641969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 26223587 - 26223676
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  26223587 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 51894570 - 51894686
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||| |||||||||| | ||||||||||||||| || |||||| ||||||||||||||| |||||| ||||||||||||||||||   | | ||| ||    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaat 51894669  T
Q  236 caaatccgtccctccgt 252  Q
    |||||| ||||||||||    
T  51894670 caaatcagtccctccgt 51894686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 1442594 - 1442669
Alignment:
Q  206 atttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||    
T  1442594 atttcgtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgtg 1442669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 1442669 - 1442732
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  1442669 gtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcag 1442732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 6816866 - 6816933
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaat 201  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaat 6816933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 25276742 - 25276861
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||| ||  |||||||||| ||||||| | |||||||||||||||   | | |||    
T  25276742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 25276841  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  25276842 aatcaaatcagtccctccgt 25276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 37088225 - 37088106
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||| ||||| |||||| |||| | |||||   | | |||    
T  37088225 gactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtccttaaatttacaaaatgtc 37088126  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  37088125 aatcaaatcagtccctccgt 37088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 37346051 - 37345932
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| |||||||| |||| ||| || ||||||||||| ||||||| | |||||||||||||||   | | |||    
T  37346051 gactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 37345952  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  37345951 aatcaaatcagtccctccgt 37345932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 3011858 - 3011944
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||||||| | |||||||||||||| | |||||||||  ||||||||||| |||||||||||||||| ||||||||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaattt 3011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 12141461 - 12141518
Alignment:
Q  75 tgttgtaaattagatgtggaattatcatgtataagaagaaattaaaagaaatatgata 132  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12141461 tgttgtaaattagatgtggaattatcatgtataagaagaaattataagaaatatgata 12141518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 2871166 - 2871046
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||| ||||| |||||| |||  |||||||   | | ||    
T  2871166 agactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgt 2871067  T
Q  232 ccatcaaatccgtccctccgt 252  Q
    | |||||||| ||||||||||    
T  2871066 caatcaaatcagtccctccgt 2871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 384
Target Start/End: Complemental strand, 26225524 - 26225427
Alignment:
Q  287 ttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||| | ||||||| || |||||||||| |||  ||||||| ||||||||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  26225524 ttgcatgatgtgttgtcttgtacacgtgtcaacaaagcagccacatgtacaaggactaaattgatggaaatggtaaaaattcgaaacttaacttttca 26225427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 25278854 - 25278934
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtc 213  Q
    |||||||||||||||||| ||| |||||||| ||||||| | |||||| ||| ||||||||||| ||||||||||||||||    
T  25278854 gactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 9121644 - 9121581
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||| || ||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  9121644 gtcagcaacatgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcag 9121581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 47013058 - 47012995
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||    
T  47013058 gtcagccacgtgtacagggactaaactgatggaaattgtcaaaatttgatatttaacatttcag 47012995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 51896116 - 51896057
Alignment:
Q  326 gccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  51896116 gccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcag 51896057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 1444271 - 1444181
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||| | |||| | |||||| ||||||||||||| || ||| ||||||||| ||||||||| | |||||||||||||||    
T  1444271 agactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaattt 1444181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 1953977 - 1953919
Alignment:
Q  75 tgttgtaaatt-agatgtggaattatcatgtataagaagaaattaaaagaaatatgata 132  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  1953977 tgttgtaaatttagatgtggaaatatcatgtataagaagaaattaaaagaaatatgata 1953919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 4854410 - 4854499
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||| |||||||||||| |||||||| ||||||||  ||| |||||| ||||||||||| ||| ||| | |||||||||||||||    
T  4854410 gactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 9120039 - 9120128
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  9120039 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 9120128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 27089368 - 27089279
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| |||||||||| || ||||||  |||||||||  ||||||| | ||| |||||||||||    
T  27089368 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaattt 27089279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 33599186 - 33599255
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaat 201  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||  ||||||||| |||||    
T  33599186 agactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaattttgaaaaat 33599255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 47011456 - 47011545
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| ||||||  |||||||| | ||||||| | |||||||||||||||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaattt 47011545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 45044949 - 45045009
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattt 193  Q
    |||||||||||||||||||||| ||||||||||||||| || | |||||||| ||||||||    
T  45044949 gactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 349
Target Start/End: Original strand, 51121961 - 51122121
Alignment:
Q  189 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgacttttt 288  Q
    |||||||||||||||| |||| ||||||||||||  |  ||||||||||||   |||||||||||||||| ||| |||| |  || |||  || ||   |    
T  51121961 aattttgcaaaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtctgttagtgatgttgagctggctccct 51122060  T
Q  289 gcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattg 349  Q
    ||||| | ||||||| || ||||||||||  |||  || ||||||||||||||||||||||    
T  51122061 gcatgttgtgttgtcatgtacacgtgtcaaaaaggaagtcacgtgtacaaggactaaattg 51122121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 33599229 - 33599307
Alignment:
Q  144 caaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||| |||||||| ||||||||| ||||||||||  |||||||||| ||||||| | ||| || ||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 42134492 - 42134605
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||||||| |||||||| |    ||||||||| || || || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||       
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  42134592 gtccctccgtccaa 42134605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 5783374 - 5783498
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| |||||||||||||||| |    |||||||||||| ||||  |||||  | ||||||| |  ||||||||||||||    |||||||||||| | |    
T  5783374 tcaatttcgtccctgaatttttaggggtcggccaaattcatctcccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 5783473  T
Q  243 gtccctccgtccaaaaagtccgtta 267  Q
    |||||||||||||||| ||||||||    
T  5783474 gtccctccgtccaaaaggtccgtta 5783498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 1442551 - 1442614
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgca 197  Q
    |||||||||||| | | |||| |||||||| ||||||||||||| |||||| ||||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattttgca 1442614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 47580685 - 47580627
Alignment:
Q  75 tgttgtaaatt-agatgtggaattatcatgtataagaagaaattaaaagaaatatgata 132  Q
    ||||||||||| ||||||| || ||||||  ||||||||||||||||||||||||||||    
T  47580685 tgttgtaaatttagatgtgaaactatcattaataagaagaaattaaaagaaatatgata 47580627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 44159375 - 44159296
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||| |||||||||||||||| | | ||||| ||| |||||| || |||| ||||||||||| ||||| | |||||||||    
T  44159375 tcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaattt 44159296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 18184030 - 18183961
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaa 239  Q
    ||||||||| || || || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||    
T  18184030 tcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 18183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 27940650 - 27940727
Alignment:
Q  175 caaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgt 252  Q
    |||||||||| || |||| ||| ||||||| ||||| ||| |||||||  |||||||||||||||   ||||||||||    
T  27940650 caaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 31801643 - 31801756
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||||||||| |||||| | |  |||| ||| |||||| || |||| ||| ||||||| | ||||||| | |||||   ||||||||||||||       
T  31801643 tcaaattcgtccctaaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtccatcaaaaag 31801742  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  31801743 gtccctccgtccaa 31801756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 36895624 - 36895511
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||| ||||||||||||| |    |||| ||| ||||||  | |||| ||| ||||||| | |||||||||||||||  |||||||||||||||       
T  36895624 tcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 36895525  T
Q  243 gtccctccgtccaa 256  Q
    |||||| |||||||    
T  36895524 gtcccttcgtccaa 36895511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 44157470 - 44157535
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||||||||| || || |||| ||||||||||| | |||||||||||||||   ||||||||||    
T  44157470 tcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgttagacgtccat 44157535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 46638921 - 46638808
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||||| |||||||||| |    |||||||| ||| || || |||| ||| ||||||| | ||||||| |||||||  |||||||||| ||||       
T  46638921 tcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacgtccaccaaaaag 46638822  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  46638821 gtccctccgtccaa 46638808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 27952554 - 27952502
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  27952554 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 27952502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 35478124 - 35478176
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||| ||| || |||| ||||||||||| ||||| |||||||||||    
T  35478124 tcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaattt 35478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 2e-83; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 13613706 - 13613454
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||| |||||||||| |||||||| ||||||||| |||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||    
T  13613706 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13613607  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    ||||||||  |||||||||||||||| |||| ||| | ||||||||||| ||| || |||||| |||||||||  |||||||||||||||||||||| ||    
T  13613606 catcaaattagtccctccgtccaaaaggtccattagtggtgatgatgtggcttctttcatgctgtgttgtcctatacacgtgtcagcaagtcagccatgt 13613507  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  13613506 gtacaaggactaaattgatggaaattgtaaaaattcgagatttaacatttcag 13613454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 134 - 385
Target Start/End: Original strand, 20523367 - 20523618
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 233  Q
    |||||||| |||||||| |||  ||||||| ||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  234 atcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtg 333  Q
    ||||||   ||||||||||||||||  || |||| | ||||||||||| ||| ||||||||  |||||||||| |||||||||| |||| ||||||||||    
T  20523467 atcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgtgtcttcttgcatgccgtgttgtcctgtacacgtgtcaacaaggcagccacgtg 20523566  T
Q  334 tacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||    
T  20523567 tacaaggactaaattgatgaaaatggtaaaaattcgagatttaacttttcag 20523618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 134 - 385
Target Start/End: Original strand, 11355223 - 11355474
Alignment:
Q  134 actaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 233  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||   ||||||||||| | ||||||||||||||||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  234 atcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtg 333  Q
    | ||||   ||||||||||||||||  |||| || | ||||||| ||| | | ||||||| | ||||||| || |||||||||| |||| ||||||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtg 11355422  T
Q  334 tacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||| ||||||    
T  11355423 tacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcag 11355474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 133 - 384
Target Start/End: Original strand, 32516877 - 32517128
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||| || ||||||||||| |||||    
T  32516877 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtc 32516976  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||| |||   | ||||||| | || |||| || |||||||| | |||| |||||||||    
T  32516977 catcaaaattgtccctccgtccaaaagctccgttagtggtgatgacgtgttctcttgcatgatgtgctgtcatgtacacgtgttaacaaggcagccacgt 32517076  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||| |||||||||||||||||||||||| |||||| || ||||||| |||||    
T  32517077 gtataaggactaaattgatggaaatggtaaaaatttgagatttaacttttca 32517128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 137 - 367
Target Start/End: Original strand, 10568403 - 10568633
Alignment:
Q  137 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatc 236  Q
    ||||| |||||||||||| |||||||| ||||||| | ||||||||||  ||||||| || |||||| |||||||||||||||||||||||||||| |||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatc 10568502  T
Q  237 aaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtac 336  Q
    |||   ||||||||||||||||  ||||||| | ||||||||||| | ||||||||| | ||||||| || |||||||||| |||| ||||||| |||||    
T  10568503 aaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtccttttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacatgtac 10568602  T
Q  337 aaggactaaattgatggaaatggtcaaaatt 367  Q
    ||||||||| |||||||||||||| ||||||    
T  10568603 aaggactaatttgatggaaatggtaaaaatt 10568633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 185 - 385
Target Start/End: Original strand, 9398712 - 9398912
Alignment:
Q  185 tctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgact 284  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||| |||||||   ||||||||||||||||  ||||||| | ||||||||||| |     
T  9398712 tctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgtgtca 9398811  T
Q  285 ttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    ||||||||| | |||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||  | ||||||||| ||||||| |||||    
T  9398812 ttttgcatgttgtgttgtcctgtacacgtgtcaacaagacagccacgtgtacaaggactaaattgatggaaattataaaaattcgagatttaacttttca 9398911  T
Q  385 g 385  Q
    |    
T  9398912 g 9398912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 133 - 384
Target Start/End: Complemental strand, 32439215 - 32438957
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||||| |||  |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  32439215 gactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 32439116  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagc----- 327  Q
    |||||||   ||||||||||||||||  || |||| ||||||||| ||| |   ||||||| | ||||||| || |||||||||| |||| ||||         
T  32439115 catcaaaatggtccctccgtccaaaagatctgttagtagtgatgacgtgtc-ccttgcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgt 32439017  T
Q  328 ---cacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
       ||||||||||||||||||||||||||||||||| ||| ||||| | ||||| |||||    
T  32439016 gtacacgtgtacaaggactaaattgatggaaatggtaaaatttcgagacttaacttttca 32438957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 133 - 367
Target Start/End: Original strand, 6899485 - 6899719
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||||| |||| |||||||| ||||||| | ||||||||||||| |||||||  ||||||||||||||||||| |||||||||||| ||    
T  6899485 gactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatc 6899584  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   |||||| |||||||||  ||||||| |  |||||||||| | | ||||||| | |||| || || |||||||||| |||| || ||||||    
T  6899585 catcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgtgtcctcttgcatgttgtgttatcatgtacacgtgtcaacaaggcaaccacgt 6899684  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaatt 367  Q
    ||||||||||||| ||||||||||| || ||||||    
T  6899685 gtacaaggactaatttgatggaaatagtaaaaatt 6899719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 133 - 281
Target Start/End: Complemental strand, 32456015 - 32455867
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||| ||||||||| ||||||||    
T  32456015 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtc 32455916  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    ||||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  32455915 catcaaatcagtccctccgtccaaaatgtccgttaataatgatgatgtg 32455867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 151 - 278
Target Start/End: Original strand, 3456766 - 3456893
Alignment:
Q  151 gtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctcc 250  Q
    |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||| ||||||||||||||||| ||||||||    
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  251 gtccaaaaagtccgttaatagtgatgat 278  Q
    ||||||||  ||||||||||||||||||    
T  3456866 gtccaaaatatccgttaatagtgatgat 3456893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 211 - 367
Target Start/End: Original strand, 7049835 - 7049991
Alignment:
Q  211 gtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcaca 310  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||  ||||||  | ||||||||||| | | ||||||| | ||||||| || |||    
T  7049835 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtaca 7049934  T
Q  311 cgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaatt 367  Q
    ||||||| |||| || ||||||||||||||||||| |||||||||||||| ||||||    
T  7049935 cgtgtcaacaaggcatccacgtgtacaaggactaatttgatggaaatggtaaaaatt 7049991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 148 - 360
Target Start/End: Complemental strand, 14338584 - 14338372
Alignment:
Q  148 ttcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccc 247  Q
    ||||||| |||||||| ||||||| ||||||||||||    |||||||| |||| |||| ||  ||||||||||| ||||||||||||||||   |||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccc 14338485  T
Q  248 tccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaat 347  Q
    ||||| |||||  ||||||| |  |||||||||  | | ||||||| | |||||||||| |||||||||| ||||  |||||||||||||||||| || |    
T  14338484 tccgttcaaaagctccgttactgatgatgatgtatcctgttgcatgatgtgttgtcctgtacacgtgtcaacaaggaagccacgtgtacaaggaccaatt 14338385  T
Q  348 tgatggaaatggt 360  Q
    |||||||||||||    
T  14338384 tgatggaaatggt 14338372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 10570011 - 10569888
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 229  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||  ||||||   | |     
T  10570011 atagactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaat 10569912  T
Q  230 gtccatcaaatccgtccctccgtc 253  Q
    |||||||||||| |||||||||||    
T  10569911 gtccatcaaatcagtccctccgtc 10569888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 136 - 281
Target Start/End: Complemental strand, 7373079 - 7372934
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||||||||||||||   |||||||| |||||| || |||||||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccat 7372980  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    ||||   ||||||||||||||||  ||| ||| | |||||||||||    
T  7372979 caaaatggtccctccgtccaaaagctccattagtggtgatgatgtg 7372934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 11357284 - 11357194
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||| | |||||||||||||||||    
T  11357284 agactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 11357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 32518587 - 32518467
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| ||| || ||||||||||| ||||||| | |||||||||||||||   | | ||    
T  32518587 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 32518488  T
Q  232 ccatcaaatccgtccctccgt 252  Q
    | |||||||| ||||||||||    
T  32518487 caatcaaatcagtccctccgt 32518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 18645193 - 18645074
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||||||||||||||| |||||||| ||||||||| | |||||||||||||||||||| ||||||| | ||||||| |||||||   | | ||    
T  18645193 agactaatacctcaaattcgtccttgaattttgaaaaatcggac-aattcgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgt 18645095  T
Q  232 ccatcaaatccgtccctccgt 252  Q
    | |||||||| ||||||||||    
T  18645094 caatcaaatcagtccctccgt 18645074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 3456896 - 3456959
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  3456896 gtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcag 3456959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 6902987 - 6902868
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    ||||||||||||||||||||||| |||||||| ||||||| | |||||||||| || ||||||||  ||||||||||||||||  ||||||   | | ||    
T  6902987 agactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgc-gaatatctatttagtcctcgaatttacaaaatgt 6902889  T
Q  232 ccatcaaatccgtccctccgt 252  Q
    |||||||||| ||||||||||    
T  6902888 ccatcaaatcagtccctccgt 6902868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 20525423 - 20525304
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||  |||||||| |||||| || ||||||| || ||||||||||||||||| |||||| |||| |||||||   | | |||    
T  20525423 gactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaatttacaaaatgtc 20525324  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  20525323 aatcaaatcagtccctccgt 20525304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 32455867 - 32455804
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  32455867 gtcagccacgtgtacaaggactaaactgatggaaattatcaaaattcgatatttaacatttcag 32455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 7371175 - 7371264
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||| ||| ||||||||||| |||||  ||||| |||| |||||||    
T  7371175 gactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaatagatattttgtccttgaattt 7371264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| ||||||| | ||||||| ||  |||||||||| ||||||||| |||||||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 7051334 - 7051255
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagt 212  Q
    ||||||||||| |||||||    |||||||||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  7051334 gactaataccttaaattcgaatttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagt 7051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 8605416 - 8605349
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaa 198  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||||||||| || ||||||||||    
T  8605416 tagactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaattttgcaa 8605349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 3480746 - 3480657
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| |  ||||||||||||||    
T  3480746 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaattt 3480657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 32454248 - 32454337
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| ||||||  |||||||| | ||||||| | |||||||||||||||    
T  32454248 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaattt 32454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 33276805 - 33276879
Alignment:
Q  137 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttag 211  Q
    |||| ||||| ||||||| |||||||||||||||| | ||||||||| ||| |||||||| ||||||||||||||    
T  33276805 aataactcaacttcgtccttgaattttaaaaaatcagtcaaattcgtttctaaattttgcgaaatatctatttag 33276879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 13610690 - 13610771
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtcc 214  Q
    ||||||||||| |||||||||| |||||||| ||||||||  |||||| ||| ||||||||||| ||||||| | |||||||    
T  13610690 gactaataccttaaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtcc 13610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaat 201  Q
    ||||||||||||||||| |||  |||||||| ||||||||||||| |||||| ||||||||||| ||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 3018541 - 3018433
Alignment:
Q  148 ttcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccc 247  Q
    |||||||||||||||| |    |||||||| |||||| || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||   |||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccc 3018442  T
Q  248 tccgtccaa 256  Q
    ||| |||||    
T  3018441 tccatccaa 3018433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 267
Target Start/End: Complemental strand, 17952156 - 17952032
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| |||||||||||||||| |    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    |||||||||||| | |    
T  17952156 tcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 17952057  T
Q  243 gtccctccgtccaaaaagtccgtta 267  Q
    |||||||||||||||| ||||||||    
T  17952056 gtccctccgtccaaaaggtccgtta 17952032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 21068628 - 21068744
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||||||||| |||||||| || |||| | ||||||||||    |||||| | |||||||||||||||||  ||||||   | | ||| ||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaat 21068727  T
Q  236 caaatccgtccctccgt 252  Q
    |||||| ||||||||||    
T  21068728 caaatcagtccctccgt 21068744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 35175977 - 35175862
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| ||||||| |||||||| |   ||||||||||||||||||  |||||  | ||||||| |  ||||||||||||||    |||||||||||| | |    
T  35175977 tcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 35175878  T
Q  243 gtccctccgtccaaaa 258  Q
    ||||||||||||||||    
T  35175877 gtccctccgtccaaaa 35175862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 2968180 - 2968245
Alignment:
Q  174 ccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaa 239  Q
    ||||||||||| || |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||    
T  2968180 ccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaa 2968245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  137 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaatttt 194  Q
    |||| ||||||||| ||| |||||||| ||||||| |||||||||||| |||||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 29077338 - 29077447
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||||||||||||||||| |    ||||||||||| ||| || |||| ||| |||| || ||||  |||||||||||  |||||||||||||||       
T  29077338 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 29077437  T
Q  243 gtccctccgt 252  Q
    ||||||||||    
T  29077438 gtccctccgt 29077447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 4641392 - 4641474
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgt 252  Q
    ||||||||||||||| || |||| ||  ||||||| ||||| |||||||||||  ||||| |||||||||   ||||||||||    
T  4641392 tcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaaggtccctccgt 4641474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 21091109 - 21091153
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaatt 180  Q
    ||||||||||||||||||| |||||||| |||||||  |||||||    
T  21091109 taatacctcaaattcgtccttgaattttcaaaaatcaaccaaatt 21091153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 30891180 - 30891248
Alignment:
Q  189 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaa 257  Q
    |||| ||||||||||   ||||||||||||||||  |||||||||| ||||   |||||||||||||||    
T  30891180 aattatgcaaaatatacgtttagtccctgaatttgtcagacgtccaacaaagtagtccctccgtccaaa 30891248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 34343929 - 34343969
Alignment:
Q  227 gacgtccatcaaatccgtccctccgtccaaaaagtccgtta 267  Q
    |||||||||||| | ||||||||||||||||| ||||||||    
T  34343929 gacgtccatcaatttcgtccctccgtccaaaaggtccgtta 34343969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 40560223 - 40560475
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||| |||||||||||  |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  40560223 gactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 40560322  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  || |||| | ||||||||||| | | ||||||||| ||||||| || || ||||||| |||| |||||||||    
T  40560323 catcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcatgtacgcgtgtcaacaaggcagccacgt 40560422  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||| ||||||    
T  40560423 gtacaaggactaaattgatggaaatggtaaaaattcaagatttaacttttcag 40560475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 131 - 385
Target Start/End: Original strand, 17696204 - 17696458
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacg 230  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||| |||    
T  17696204 tagattaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacg 17696303  T
Q  231 tccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccac 330  Q
    || ||||||   ||| ||||||||||||  ||||||| | ||||||||||| | | ||||||| | |||||||||| |||||||||| |||| ||||||     
T  17696304 tcaatcaaaatggtcactccgtccaaaagctccgttagtggtgatgatgtgtcatcttgcatgttgtgttgtcctgtacacgtgtcaacaaggcagccat 17696403  T
Q  331 gtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  17696404 gtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcag 17696458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 133 - 375
Target Start/End: Complemental strand, 39664892 - 39664650
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||||||||||||||||||    
T  39664892 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtc 39664793  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||||||| | | ||||  ||| ||||||| || |||||||||| |||| |||||||||    
T  39664792 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgctagctgtgttgtcatgtacacgtgtcaacaaggcagccacgt 39664693  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatattt 375  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  39664692 gtacaaggactaatttgatggaaatggtaaaaattcgagattt 39664650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 131 - 384
Target Start/End: Complemental strand, 19908393 - 19908139
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaa-tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 229  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||    
T  19908393 tagactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagac 19908294  T
Q  230 gtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagcca 329  Q
    |||| |||||   ||||||||||||||||  ||||||| | ||||||| ||| | | ||||||||| ||||||| || |||||||||| |||| ||||||    
T  19908293 gtccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctcttgcatgctgtgttgtcatgtacacgtgtcaacaagacagcca 19908194  T
Q  330 cgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttca 384  Q
    |||||||||||||||| |||||||||||||| ||||||||| |||| || |||||    
T  19908193 cgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttca 19908139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 14389228 - 14388976
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || | |||    
T  14389228 gactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtc 14389129  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  | ||||| ||||||||||||| | | ||||||| | ||||||| || ||||||||||  ||| |||||||||    
T  14389128 catcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgtgtcctcttgcatgttgtgttgtcttgtacacgtgtcaataaggcagccacgt 14389029  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||| ||||||    
T  14389028 gtacaaggactaacttgatggaaatggtaaaaattcgagatttaacttttcag 14388976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 133 - 385
Target Start/End: Complemental strand, 44709889 - 44709637
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||| ||||| |||||||||||||||||||||||||||||    
T  44709889 gactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtc 44709790  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  | ||||| | |||||||| || | | ||||||| | ||||||| || |||||||||| |||| || ||||||    
T  44709789 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatgatatgtcctcttgcatgttgtgttgtcttgtacacgtgtcaacaagacatccacgt 44709690  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||||||||||| |||||| || ||||||| ||||||    
T  44709689 gtacaaggactaaattgatggaaatggtaaaaatttgaaatttaacttttcag 44709637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 137 - 378
Target Start/End: Complemental strand, 42519346 - 42519104
Alignment:
Q  137 aatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaatttt-gcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||||||||||||||| ||||||||||||||| |  |||||| |||  |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   |||||||| |||||||  ||||||| | ||||||||||| | | ||||||||| |||||||||| |||||||||| |||| ||| ||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcctgtacacgtgtcaacaaggcagtcacgtgta 42519147  T
Q  336 caaggactaaattgatggaaatggtcaaaattcgatatttaac 378  Q
    ||||||||||||||||||||||||| ||||||| | |||||||    
T  42519146 caaggactaaattgatggaaatggtaaaaattcaagatttaac 42519104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 16763076 - 16763327
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  16763076 gactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 16763175  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
    |||||||   ||||||||||||||||  || |||| | | ||||| ||| |   ||||||| | | ||||| || |||||||||| |||| |||||||||    
T  16763176 catcaaaatggtccctccgtccaaaatctctgttagtggcgatgacgtgtc-ccttgcatgttgttttgtcttgtacacgtgtcaacaaggcagccacgt 16763274  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||| ||||||| ||||||||| | ||||| ||||||    
T  16763275 gtacaaggactaaattgatgaaaatggtaaaaattcgagacttaacttttcag 16763327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 2766934 - 2767186
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||| ||||||||||||| |||||||| ||||||||| |||| |||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  2766934 gactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 2767033  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
     ||||||   ||||||| ||||||||  ||||||| | ||||||||||| | | ||| ||| | |||||||||| |||||||| | |||| ||| |||||    
T  2767034 tatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgtgtcctcttgtatgttgtgttgtcctgtacacgtgttaacaaggcagtcacgt 2767133  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||| ||| ||||||||||||||| || ||||||||| ||||||| ||||||    
T  2767134 gtacatggattaaattgatggaaatagtaaaaattcgagatttaacttttcag 2767186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 39455169 - 39455421
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattc-gtctctgaattttgcaaaatatctatttagtccctgaattttacagacgt 231  Q
    |||||||| |||||||| |||| ||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  39455169 gactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtc-ctgaattttgcaaaatatctatttagtccatgaattttacagacgt 39455267  T
Q  232 ccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacg 331  Q
    ||||||||   ||| |||||| |||||  ||||||| | | ||||||||| | | ||||||| | ||||||| || |||||||||| |||| || || ||    
T  39455268 ccatcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgtgccctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcaccctcg 39455367  T
Q  332 tgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    || |||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  39455368 tgcacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcag 39455421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 133 - 385
Target Start/End: Original strand, 6797507 - 6797759
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||| |||||| |   ||||||||||||||| ||| ||||||||  ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  6797507 gactaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtc 6797606  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgt 332  Q
     ||||||   || |||||||||||||  || ||||   ||||||||||  | | ||||||| | ||||||| || |||||||||| |||| |||||||||    
T  6797607 tatcaaaatggttcctccgtccaaaagctctgttacgggtgatgatgtatcctcttgcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgt 6797706  T
Q  333 gtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||    
T  6797707 gtacaaggactaaattgatgaaaatggtaaaaattcgagatttaacttttcag 6797759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 133 - 281
Target Start/End: Complemental strand, 6786125 - 6785977
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| || |||| |   ||||||| | |||||||||||||||||||||||||    
T  6786125 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtc 6786026  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    ||||||||| |||||||||||||||| ||| ||||| ||||||||||||    
T  6786025 catcaaatcagtccctccgtccaaaatgtctgttaacagtgatgatgtg 6785977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 133 - 281
Target Start/End: Original strand, 37020508 - 37020656
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| || |||  ||||||||   ||||||| | |||||||||||||||| ||||||||    
T  37020508 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtc 37020607  T
Q  233 catcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtg 281  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  37020608 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtg 37020656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 24208186 - 24208060
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||||||| |  ||| |||||||| ||||||||||||| |||||| ||||||| | | ||||||| | |||||||||||||||||||||||||    
T  24208186 gactaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtc 24208087  T
Q  233 catcaaatccgtccctccgtccaaaaa 259  Q
    ||||||||| |||||||||||||||||    
T  24208086 catcaaatcagtccctccgtccaaaaa 24208060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 126 - 367
Target Start/End: Original strand, 37645480 - 37645721
Alignment:
Q  126 tatgatagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttac 225  Q
    |||| |||| ||||||| ||| ||||||| |||||||| ||||||| | | ||||||||  | ||||||   ||||||||||||||||| |||||||| |    
T  37645480 tatggtagagtaataccccaacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgc 37645579  T
Q  226 agacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtca 325  Q
    ||| ||  ||||||   ||||||||||||| ||  || |||| |  |||||||||| | | ||| ||||| |||||||||| |||||||||| |||| ||    
T  37645580 agatgtttatcaaaattgtccctccgtccataagctctgttattgatgatgatgtgtcatcttgtatgctgtgttgtcctgtacacgtgtcaacaagaca 37645679  T
Q  326 gccacgtgtacaaggactaaattgatggaaatggtcaaaatt 367  Q
     |||||||||||||||| || || ||||||||||| ||||||    
T  37645680 accacgtgtacaaggaccaatttaatggaaatggtaaaaatt 37645721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 133 - 252
Target Start/End: Original strand, 39663154 - 39663273
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    ||||||||||| |||||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||   | | |||    
T  39663154 gactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtc 39663253  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  39663254 aatcaaatcagtccctccgt 39663273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 16376736 - 16376825
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||| | ||||| |||||||||||||||||||    
T  16376736 gactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaattt 16376825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 16377305 - 16377197
Alignment:
Q  169 atcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaa 268  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||   ||||||||||||||||  |||||||     
T  16377305 atcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttag 16377206  T
Q  269 tagtgatga 277  Q
    | |||||||    
T  16377205 tggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 19906685 - 19906801
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||  |||||   | | ||| ||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaat 19906784  T
Q  236 caaatccgtccctccgt 252  Q
    |||||| ||||||||||    
T  19906785 caaatcagtccctccgt 19906801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 14387347 - 14387438
Alignment:
Q  131 tagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  14387347 tagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 19581411 - 19581522
Alignment:
Q  130 atagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagac 229  Q
    ||||||||||||||||||||||||| | |||||| ||||||| |||||||| ||| ||||||||||| |||||||||||||||||  ||||||  || |     
T  19581411 atagactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaat 19581510  T
Q  230 gtccatcaaatc 241  Q
    ||||||||||||    
T  19581511 gtccatcaaatc 19581522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 24208047 - 24207984
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24208047 gtcagccacgtgtacaaggactaaactgatggaaatggtcaaaattcgatatttaacatttcag 24207984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 16764700 - 16764611
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||||||| |||||||| | ||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  16764700 gactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 37020656 - 37020719
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  37020656 gtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcag 37020719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 252
Target Start/End: Complemental strand, 40561967 - 40561848
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 232  Q
    |||||||||||||||||||||  |||||||| ||||||||||||| |||||||||||||||||  ||||| | | |||||||||||||||   | | |||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtc 40561868  T
Q  233 catcaaatccgtccctccgt 252  Q
     |||||||| ||||||||||    
T  40561867 aatcaaatcggtccctccgt 40561848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 34400314 - 34400403
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||| || ||||||||||| ||||| |||||| |||| |||||||    
T  34400314 gactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaattt 34400403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 39456869 - 39456780
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||| |||||||| ||| ||||||||||||||| ||  |||||||||  |||||||||||||||| |||||||||||||||||||    
T  39456869 gactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaattt 39456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 6785977 - 6785914
Alignment:
Q  322 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  6785977 gtcagccacgtatacaaggactaaactgatggaaatggtcaaaatttgatatttaacatttcag 6785914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 6783364 - 6783453
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||||||||||||| ||| |||||| ||||||| | ||||||||| | |||||||||||||||    
T  6783364 gactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 24205598 - 24205687
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||||||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  24205598 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 24205687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 6799494 - 6799408
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||| ||||||||||||| |||||||| ||||||||| ||||||||||  |||||||||| ||||| |||||| |||| |||||||    
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaattt 6799408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 37022274 - 37022185
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| |||||||| |||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  37022274 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 37022185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 2577569 - 2577480
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| |||||||| |||| |||||| |||||||||   ||||||| | |||||||||||||||    
T  2577569 gactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaattt 2577480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 342
Target Start/End: Original strand, 361455 - 361654
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| ||||||| |||||||| |  ||||||||||| || || || |||| ||  ||||||| | ||||||  ||||||   |||||||||||||| |      
T  361455 tcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtccatcaattta 361554  T
Q  243 gtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggac 342  Q
    ||||||| |||||| |  || |||||| ||||||| ||| |||  |||||| | || |||  || |||| ||||| ||||||||||||||||||||||||    
T  361555 gtccctctgtccaatatatctgttaatggtgatgaggtgtcttcctgcatgttgtgatgtgttgtacacatgtcatcaagtcagccacgtgtacaaggac 361654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 15372536 - 15372618
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgt 252  Q
    ||||||||||||| | || |||| ||||||||||| ||||| |||||||||||  |||||||||||||||   ||||||||||    
T  15372536 tcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 15372618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 11023100 - 11023003
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgtta 267  Q
    ||||||||||||||| |  |||||  | ||||||| |  ||||||||||||||    |||||||||||| ||||||||||||||||||| ||||||||    
T  11023100 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgtta 11023003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 356
Target Start/End: Original strand, 17946104 - 17946317
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| |||||||||||||||  ||  ||| || ||| |||||  | |||||||||||||||| |||| ||||||||||||  |  | ||||||||||       
T  17946104 tcaacttcgtccctgaatttgcaagcatcagctaaaatcgtccttaaattttgcaaaatatcaattttgtccctgaatttctctcatgtccatcaaaatg 17946203  T
Q  243 gtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggac 342  Q
    |||||||||||||||| |||||||| |  || | |  || ||   || ||| | ||||||| || |||| |||||  |||  || |||||||||||||||    
T  17946204 gtccctccgtccaaaaggtccgttagtgatgctaagctggctccctgtatgttgtgttgtcatgtacacatgtcaaaaaggaagtcacgtgtacaaggac 17946303  T
Q  343 taaattgatggaaa 356  Q
    ||||||||||||||    
T  17946304 taaattgatggaaa 17946317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 29909774 - 29909661
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    ||||||| ||||||||||||| |    |||||||| || ||| || |||| ||| ||||||| ||||||||||| |||||  |||||||||||||||       
T  29909774 tcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaag 29909675  T
Q  243 gtccctccgtccaa 256  Q
    ||||||||||||||    
T  29909674 gtccctccgtccaa 29909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 10716873 - 10716793
Alignment:
Q  287 ttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaatt 367  Q
    ||||||| | ||||||| || |||||||||| ||||  |||||||||||||||||| || |||||||||||| | ||||||    
T  10716873 ttgcatgttgtgttgtcttgtacacgtgtcaacaaggaagccacgtgtacaaggaccaatttgatggaaatgatgaaaatt 10716793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 42517558 - 42517602
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaa 177  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  42517558 gactaatacctcaaattcgtccttgaatttttaaaaatcggccaa 42517602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 31475166 - 31475079
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 223  Q
    ||||||||||| ||||| | | |||||| ||||||| | |||||||||| |  |||||||  ||||||||||||| ||||||||||||    
T  31475166 taatacctcaacttcgttctttaattttcaaaaatcagtcaaattcgtcaccaaattttgagaaatatctatttaatccctgaatttt 31475079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 26584901 - 26584819
Alignment:
Q  173 gccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtcca 255  Q
    |||||||||||| || || ||| ||||||||| | ||| ||||| ||||| | ||||||||||||||| | ||||||||||||    
T  26584901 gccaaattcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtcca 26584819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 37417310 - 37417396
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    |||||||||||| || || |||| ||| ||||||| | |||||||||||||||  |||||||||||||||   |||||| |||||||    
T  37417310 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaa 37417396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 41223 - 41144
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||| |||||||||||||||| |    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  41223 tcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 37646564 - 37646477
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaatttt 223  Q
    ||||||| ||| ||||| | |||| ||| ||||||| | ||||||||||    |||| ||| ||||||||||||||||||||||||||    
T  37646564 taataccccaacttcgttcttgaactttcaaaaatcagtcaaattcgtcctcaaattctgcgaaatatctatttagtccctgaatttt 37646477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 39593 - 39679
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaa 256  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||  ||| |||| || |||   ||||||||||||||    
T  39593 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcaggcgtcgattaaaaaggtccctccgtccaa 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 162141 - 162056
Alignment:
Q  156 tgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatc 241  Q
    |||||||| ||||||| | |||||||| | |  |||||| ||||||||||||||||| | ||||||||  | ||||| ||||||||    
T  162141 tgaattttcaaaaatcagtcaaattcgaccccaaattttacaaaatatctatttagttcttgaattttcaaaacgtcaatcaaatc 162056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 352
Target Start/End: Original strand, 7744085 - 7744262
Alignment:
Q  175 caaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtga 274  Q
    |||| |||||||  |||||||| ||||||| |||| ||||||||||||  |  | ||||||||||   |||||||| ||||||| |||||||| |  ||     
T  7744085 caaaatcgtctcaaaattttgcgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctccatccaaaaggtccgttagtgatgc 7744184  T
Q  275 tgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatg 352  Q
    |||  |  || | || ||| | ||||||| || |||| |||||  |||  |||||||||||||| |||||||||||||    
T  7744185 tgagttagctctctgtatgttgtgttgtcatgtacacatgtcaaaaaggaagccacgtgtacaatgactaaattgatg 7744262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 15432365 - 15432434
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaa 239  Q
    |||| ||||||| || || |||| ||| ||||||| |||||||| ||||||||  |||||||||||||||    
T  15432365 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaa 15432434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 25619670 - 25619783
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||||||||||| |||||||| |    |||| ||||||| || || |||| ||||||||||| | |||||||||||||||  || | ||||||||||       
T  25619670 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtccatcaaaaag 25619769  T
Q  243 gtccctccgtccaa 256  Q
    |||||||| |||||    
T  25619770 gtccctccatccaa 25619783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 28246673 - 28246797
Alignment:
Q  143 tcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatcc 242  Q
    |||| |||||||||||||||| |    ||||||||||||||| |  |||||  | ||||||| |  |||| |||||||||    |||||||||||| | |    
T  28246673 tcaatttcgtccctgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagttcctgaatttgtttgacgtccatcaatttc 28246772  T
Q  243 gtccctccgtccaaaaagtccgtta 267  Q
    ||||||| |||||||| ||||||||    
T  28246773 gtccctctgtccaaaaggtccgtta 28246797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 41708484 - 41708432
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||    
T  41708484 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41708432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 135 - 385
Target Start/End: Original strand, 8264 - 8512
Alignment:
Q  135 ctaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtcca 234  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||  | |||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttt--atacgtcca 8361  T
Q  235 tcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgt 334  Q
    |||||   || | |||||||||||  | ||||| | ||||||| ||| | | ||||| | | ||||||| || |||||||||| |||| |||||||||||    
T  8362 tcaaaatggtacatccgtccaaaagcttcgttagtggtgatgacgtgtcctcttgcaagatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgt 8461  T
Q  335 acaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcag 385  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  8462 acaagtactaaattgatggaaatggtaaaaattcgagatttaacttttcag 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 136 - 368
Target Start/End: Original strand, 1266 - 1497
Alignment:
Q  136 taatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 235  Q
    ||||||||||||| ||||| ||||||||||||||| ||  |||||||||  ||||||||   ||||||||||||||||||||||||||||||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  236 caaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcacacgtgtcagcaagtcagccacgtgta 335  Q
    ||||   ||||||||||||||||  ||||||| | ||||||| || |    ||||||||| ||||||| || |||||||||| |||| || |||||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtggtgatgacgt-atcccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcaaccacgtgta 1464  T
Q  336 caaggactaaattgatggaaatggtcaaaattc 368  Q
    ||||||||||||||||||||||||| |||||||    
T  1465 caaggactaaattgatggaaatggtaaaaattc 1497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 211 - 383
Target Start/End: Original strand, 37282 - 37454
Alignment:
Q  211 gtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaagtccgttaatagtgatgatgtgactttttgcatgctttgttgtcctgcaca 310  Q
    |||| ||||||||||||||||| ||||||   ||  |||| |||||||| ||||||||| |||||||| || ||| ||| ||| | |||||||||  |||    
T  37282 gtccatgaattttacagacgtctatcaaaatggtttctccatccaaaaactccgttaatggtgatgatatgtcttcttgtatgttgtgttgtcctttaca 37381  T
Q  311 cgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttc 383  Q
    ||||||| |||| || ||||||||||||||||||| ||||||||||| || ||||||||| ||||||| ||||    
T  37382 cgtgtcaacaaggcaaccacgtgtacaaggactaatttgatggaaattgtaaaaattcgaaatttaacttttc 37454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 1645 - 1555
Alignment:
Q  132 agactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||| | |||||||||||||||||    
T  1645 agactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 1555  T

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Target: scaffold0081 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 54347 - 54258
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| ||||||||| ||| |||||| ||||||||| | ||||||| | |||||||||||||||    
T  54347 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 54258  T

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Target: scaffold1712 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 982 - 1071
Alignment:
Q  133 gactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattt 222  Q
    ||||||||||||||| | |||| |||||||| |||||||||| || |||||| ||||||| | | ||||||| |  ||||||||||||||    
T  982 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 1071  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 436261 - 436341
Alignment:
Q  129 gatagactaatacctcaaattcgtccctgaattttaaaaaatcggccaaattcgtctctgaattttgcaaaatatctattt 209  Q
    |||||| ||| ||||||||||||| | |||||||| ||||||| ||||||||| ||  | |||||||| ||||||||||||    
T  436261 gatagagtaacacctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

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Target: scaffold0477 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 6721 - 6639
Alignment:
Q  170 tcggccaaattcgtctctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaatccgtccctccgt 252  Q
    ||||||||||||||| || |||| ||  ||||||| ||||| |||||||||||  ||||| |||||||||   ||||||||||    
T  6721 tcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaaggtccctccgt 6639  T

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