View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9889_low_13 (Length: 408)

Name: NF9889_low_13
Description: NF9889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9889_low_13
NF9889_low_13
[»] chr8 (20 HSPs)
chr8 (8-391)||(20391202-20391585)
chr8 (8-302)||(6606751-6607045)
chr8 (25-391)||(22373985-22374351)
chr8 (54-391)||(19985296-19985633)
chr8 (24-391)||(21928544-21928911)
chr8 (54-391)||(16268552-16268889)
chr8 (286-391)||(28984027-28984132)
chr8 (286-391)||(28989246-28989351)
chr8 (286-391)||(22027840-22027945)
chr8 (191-394)||(31413997-31414200)
chr8 (325-386)||(29301025-29301086)
chr8 (286-386)||(22053984-22054084)
chr8 (25-137)||(22027579-22027691)
chr8 (90-137)||(28984281-28984328)
chr8 (343-391)||(22375071-22375119)
chr8 (235-302)||(21982451-21982518)
chr8 (235-302)||(21998937-21999004)
chr8 (235-302)||(21329776-21329843)
chr8 (340-391)||(22031219-22031270)
chr8 (91-141)||(20015628-20015678)
[»] chr6 (26 HSPs)
chr6 (5-391)||(19486275-19486661)
chr6 (51-391)||(21474514-21474854)
chr6 (24-394)||(25770755-25771125)
chr6 (32-282)||(16813663-16813913)
chr6 (51-212)||(8720732-8720893)
chr6 (53-302)||(25958782-25959031)
chr6 (89-393)||(30678089-30678393)
chr6 (24-391)||(19455937-19456304)
chr6 (24-391)||(19466082-19466449)
chr6 (24-386)||(14376916-14377278)
chr6 (90-387)||(24367318-24367615)
chr6 (325-391)||(10466149-10466215)
chr6 (24-391)||(18797604-18797971)
chr6 (52-391)||(19437916-19438255)
chr6 (325-386)||(15462255-15462316)
chr6 (327-386)||(24515717-24515776)
chr6 (51-136)||(10465875-10465960)
chr6 (24-137)||(24515414-24515527)
chr6 (310-394)||(18182653-18182737)
chr6 (286-386)||(34642848-34642948)
chr6 (337-386)||(21567304-21567353)
chr6 (169-389)||(23084970-23085190)
chr6 (103-142)||(15462499-15462538)
chr6 (340-391)||(16924956-16925007)
chr6 (340-394)||(5836544-5836598)
chr6 (340-394)||(25115463-25115517)
[»] chr5 (32 HSPs)
chr5 (8-391)||(21983198-21983581)
chr5 (8-391)||(21561046-21561429)
chr5 (8-302)||(23669685-23669979)
chr5 (54-349)||(16258103-16258398)
chr5 (54-349)||(22591822-22592117)
chr5 (54-349)||(22595377-22595672)
chr5 (8-302)||(43122520-43122814)
chr5 (56-386)||(23563237-23563567)
chr5 (89-387)||(21631501-21631799)
chr5 (95-386)||(20824422-20824713)
chr5 (24-391)||(23077942-23078309)
chr5 (324-391)||(14884328-14884395)
chr5 (325-391)||(20345246-20345312)
chr5 (292-391)||(22505643-22505742)
chr5 (324-386)||(20778882-20778944)
chr5 (325-391)||(25851036-25851102)
chr5 (328-386)||(22464919-22464977)
chr5 (324-386)||(28892279-28892341)
chr5 (10-137)||(22505897-22506024)
chr5 (324-386)||(17266671-17266733)
chr5 (54-140)||(14884058-14884144)
chr5 (54-137)||(20345500-20345583)
chr5 (90-137)||(25851290-25851337)
chr5 (51-137)||(21870342-21870428)
chr5 (51-137)||(21874622-21874708)
chr5 (210-383)||(21410124-21410297)
chr5 (89-136)||(23474431-23474478)
chr5 (340-391)||(26736080-26736131)
chr5 (340-394)||(23460950-23461004)
chr5 (91-141)||(27613588-27613638)
chr5 (95-136)||(20779132-20779173)
chr5 (95-136)||(28892050-28892091)
[»] chr7 (34 HSPs)
chr7 (10-386)||(12203628-12204004)
chr7 (25-391)||(19150051-19150417)
chr7 (25-391)||(20749450-20749816)
chr7 (24-391)||(12798346-12798710)
chr7 (51-391)||(14261115-14261455)
chr7 (54-391)||(13965540-13965877)
chr7 (52-391)||(15099473-15099812)
chr7 (10-394)||(26115418-26115802)
chr7 (286-391)||(26091902-26092007)
chr7 (286-391)||(49155341-49155446)
chr7 (292-394)||(21755449-21755551)
chr7 (289-391)||(40924924-40925026)
chr7 (95-391)||(15627563-15627859)
chr7 (325-397)||(12459662-12459734)
chr7 (24-391)||(13024385-13024751)
chr7 (286-386)||(11385533-11385633)
chr7 (286-386)||(18051057-18051157)
chr7 (324-391)||(16947614-16947681)
chr7 (24-137)||(13676745-13676858)
chr7 (327-386)||(13676496-13676555)
chr7 (287-386)||(15343476-15343575)
chr7 (324-386)||(14140724-14140786)
chr7 (324-386)||(14283516-14283578)
chr7 (54-137)||(26091670-26091753)
chr7 (54-137)||(40924689-40924772)
chr7 (61-137)||(49155595-49155671)
chr7 (51-136)||(12459923-12460008)
chr7 (10-137)||(21755706-21755833)
chr7 (210-302)||(15114330-15114422)
chr7 (76-137)||(14283268-14283329)
chr7 (298-391)||(17703593-17703686)
chr7 (335-366)||(12712816-12712847)
chr7 (94-136)||(16947384-16947426)
chr7 (298-391)||(16726579-16726672)
[»] scaffold0509 (1 HSPs)
scaffold0509 (80-386)||(11912-12218)
[»] scaffold0004 (3 HSPs)
scaffold0004 (8-391)||(200319-200693)
scaffold0004 (51-386)||(325791-326125)
scaffold0004 (51-165)||(319548-319662)
[»] chr3 (42 HSPs)
chr3 (10-386)||(15230287-15230663)
chr3 (10-386)||(15236155-15236531)
chr3 (24-391)||(12857579-12857945)
chr3 (54-349)||(2037025-2037320)
chr3 (54-349)||(2040766-2041061)
chr3 (54-349)||(14039467-14039762)
chr3 (8-302)||(15008651-15008942)
chr3 (24-386)||(14290615-14290977)
chr3 (24-391)||(35982860-35983227)
chr3 (55-391)||(16825393-16825731)
chr3 (109-302)||(13028524-13028717)
chr3 (54-391)||(28756998-28757335)
chr3 (51-386)||(12357637-12357972)
chr3 (24-386)||(11958264-11958626)
chr3 (24-397)||(31941576-31941949)
chr3 (286-391)||(10408647-10408752)
chr3 (95-386)||(10417199-10417490)
chr3 (325-391)||(12509867-12509933)
chr3 (52-386)||(17494331-17494664)
chr3 (286-391)||(16327054-16327159)
chr3 (286-391)||(47126623-47126728)
chr3 (286-386)||(16831873-16831973)
chr3 (24-394)||(31692268-31692638)
chr3 (52-386)||(12181028-12181362)
chr3 (286-386)||(8744735-8744835)
chr3 (286-386)||(13317879-13317979)
chr3 (286-386)||(13944708-13944808)
chr3 (327-386)||(18131733-18131792)
chr3 (324-386)||(17189058-17189120)
chr3 (327-386)||(11949311-11949370)
chr3 (324-383)||(16378317-16378376)
chr3 (328-386)||(24189988-24190046)
chr3 (54-137)||(47126877-47126960)
chr3 (24-137)||(18131430-18131543)
chr3 (210-391)||(15013038-15013219)
chr3 (235-302)||(2247148-2247215)
chr3 (54-137)||(10408901-10408984)
chr3 (8-142)||(13317636-13317770)
chr3 (310-391)||(11861043-11861124)
chr3 (10-134)||(19727686-19727810)
chr3 (24-137)||(16326790-16326905)
chr3 (52-137)||(16831639-16831724)
[»] scaffold0130 (1 HSPs)
scaffold0130 (10-389)||(3736-4112)
[»] chr2 (15 HSPs)
chr2 (8-302)||(28350645-28350939)
chr2 (8-243)||(21901366-21901601)
chr2 (196-391)||(23113404-23113598)
chr2 (51-391)||(19716439-19716779)
chr2 (51-391)||(19721002-19721342)
chr2 (286-391)||(20848270-20848375)
chr2 (52-386)||(23274279-23274613)
chr2 (286-386)||(12577039-12577139)
chr2 (286-386)||(23097675-23097775)
chr2 (86-136)||(24817297-24817347)
chr2 (90-137)||(20848524-20848570)
chr2 (91-137)||(22462943-22462989)
chr2 (325-391)||(45673708-45673774)
chr2 (325-378)||(19817541-19817594)
chr2 (310-391)||(30208601-30208682)
[»] chr4 (25 HSPs)
chr4 (24-282)||(8708836-8709094)
chr4 (8-302)||(13879248-13879542)
chr4 (24-391)||(15073409-15073776)
chr4 (25-391)||(14993223-14993589)
chr4 (51-391)||(16150686-16151026)
chr4 (51-391)||(16154832-16155172)
chr4 (8-386)||(27903440-27903818)
chr4 (51-391)||(20893081-20893421)
chr4 (286-391)||(3261911-3262016)
chr4 (54-391)||(7357317-7357654)
chr4 (51-391)||(11204114-11204454)
chr4 (56-391)||(44658753-44659088)
chr4 (289-391)||(29450657-29450759)
chr4 (52-386)||(15266831-15267165)
chr4 (286-386)||(51603909-51604009)
chr4 (286-386)||(53750587-53750687)
chr4 (327-384)||(15354234-15354291)
chr4 (54-137)||(29450422-29450505)
chr4 (54-137)||(3261679-3261762)
chr4 (89-391)||(14697151-14697453)
chr4 (298-391)||(16350423-16350516)
chr4 (52-137)||(18259745-18259830)
chr4 (340-391)||(15946-15997)
chr4 (340-394)||(16219235-16219289)
chr4 (340-394)||(16222555-16222609)
[»] scaffold0609 (2 HSPs)
scaffold0609 (51-302)||(1107-1358)
scaffold0609 (8-123)||(7904-8019)
[»] scaffold0192 (1 HSPs)
scaffold0192 (24-391)||(29606-29973)
[»] scaffold0585 (1 HSPs)
scaffold0585 (76-391)||(3999-4314)
[»] scaffold0865 (1 HSPs)
scaffold0865 (51-391)||(1157-1497)
[»] scaffold0133 (1 HSPs)
scaffold0133 (51-391)||(28170-28510)
[»] scaffold0104 (1 HSPs)
scaffold0104 (51-391)||(43304-43644)
[»] scaffold0046 (2 HSPs)
scaffold0046 (24-391)||(70187-70554)
scaffold0046 (352-391)||(60818-60857)
[»] chr1 (32 HSPs)
chr1 (8-206)||(18273048-18273246)
chr1 (51-386)||(21742506-21742841)
chr1 (51-391)||(21738990-21739330)
chr1 (52-391)||(22015700-22016039)
chr1 (24-391)||(24096542-24096909)
chr1 (286-391)||(48425969-48426074)
chr1 (286-391)||(38910015-38910120)
chr1 (51-379)||(21961135-21961463)
chr1 (24-391)||(19857370-19857737)
chr1 (292-391)||(52988837-52988936)
chr1 (325-391)||(20074937-20075003)
chr1 (286-391)||(31537186-31537291)
chr1 (286-391)||(37680145-37680250)
chr1 (325-391)||(20297477-20297543)
chr1 (8-386)||(20853671-20854049)
chr1 (327-386)||(18710486-18710545)
chr1 (51-386)||(20832854-20833189)
chr1 (24-137)||(31536924-31537037)
chr1 (10-137)||(52989091-52989218)
chr1 (54-137)||(38909783-38909866)
chr1 (54-137)||(48426223-48426306)
chr1 (89-394)||(16379156-16379461)
chr1 (54-137)||(20297733-20297816)
chr1 (90-137)||(37680399-37680446)
chr1 (169-391)||(21045196-21045418)
chr1 (54-137)||(20074666-20074749)
chr1 (163-391)||(22435799-22436027)
chr1 (340-394)||(21752109-21752163)
chr1 (169-391)||(24784929-24785151)
chr1 (340-391)||(17042258-17042309)
chr1 (340-394)||(21842274-21842328)
chr1 (210-278)||(22401770-22401838)
[»] scaffold0020 (2 HSPs)
scaffold0020 (51-391)||(176067-176406)
scaffold0020 (52-391)||(98469-98808)
[»] scaffold0335 (1 HSPs)
scaffold0335 (24-391)||(4162-4529)
[»] scaffold1056 (1 HSPs)
scaffold1056 (26-391)||(1800-2164)
[»] scaffold0102 (1 HSPs)
scaffold0102 (25-391)||(42777-43143)
[»] scaffold0106 (1 HSPs)
scaffold0106 (24-391)||(34416-34783)
[»] scaffold0054 (1 HSPs)
scaffold0054 (25-391)||(63378-63744)
[»] scaffold0751 (1 HSPs)
scaffold0751 (51-391)||(5260-5599)
[»] scaffold0026 (1 HSPs)
scaffold0026 (24-391)||(51730-52097)
[»] scaffold0420 (1 HSPs)
scaffold0420 (24-391)||(8693-9060)
[»] scaffold0067 (4 HSPs)
scaffold0067 (24-391)||(29703-30070)
scaffold0067 (51-386)||(49065-49400)
scaffold0067 (51-386)||(58099-58434)
scaffold0067 (51-386)||(64487-64822)
[»] scaffold0108 (1 HSPs)
scaffold0108 (25-391)||(50184-50550)
[»] scaffold1433 (1 HSPs)
scaffold1433 (8-391)||(1153-1536)
[»] scaffold0405 (1 HSPs)
scaffold0405 (24-391)||(5681-6048)
[»] scaffold0404 (1 HSPs)
scaffold0404 (8-391)||(7823-8206)
[»] scaffold0180 (1 HSPs)
scaffold0180 (51-181)||(30898-31028)
[»] scaffold0165 (1 HSPs)
scaffold0165 (211-391)||(12039-12219)
[»] scaffold0310 (1 HSPs)
scaffold0310 (24-391)||(11056-11423)
[»] scaffold0161 (1 HSPs)
scaffold0161 (53-205)||(36096-36245)
[»] scaffold0100 (1 HSPs)
scaffold0100 (89-391)||(16532-16834)
[»] scaffold0056 (1 HSPs)
scaffold0056 (52-386)||(769-1103)
[»] scaffold0010 (5 HSPs)
scaffold0010 (51-391)||(39218-39558)
scaffold0010 (89-391)||(4994-5296)
scaffold0010 (340-394)||(14500-14554)
scaffold0010 (91-137)||(14757-14803)
scaffold0010 (90-136)||(180763-180809)
[»] scaffold0523 (4 HSPs)
scaffold0523 (25-348)||(5562-5885)
scaffold0523 (327-391)||(11904-11968)
scaffold0523 (343-391)||(2950-2998)
scaffold0523 (90-137)||(11667-11714)
[»] scaffold0309 (1 HSPs)
scaffold0309 (202-391)||(12806-12995)
[»] scaffold0664 (1 HSPs)
scaffold0664 (51-386)||(7122-7457)
[»] scaffold0034 (3 HSPs)
scaffold0034 (8-386)||(70456-70834)
scaffold0034 (24-391)||(1810-2177)
scaffold0034 (52-259)||(11792-11999)
[»] scaffold1032 (1 HSPs)
scaffold1032 (52-386)||(701-1035)
[»] scaffold0443 (2 HSPs)
scaffold0443 (286-391)||(11888-11993)
scaffold0443 (91-137)||(12130-12176)
[»] scaffold0029 (2 HSPs)
scaffold0029 (90-386)||(93818-94114)
scaffold0029 (335-391)||(115641-115697)
[»] scaffold0243 (2 HSPs)
scaffold0243 (51-386)||(9657-9992)
scaffold0243 (340-391)||(24119-24170)
[»] scaffold0041 (2 HSPs)
scaffold0041 (289-391)||(41814-41916)
scaffold0041 (54-137)||(42068-42151)
[»] scaffold0088 (2 HSPs)
scaffold0088 (286-391)||(30013-30118)
scaffold0088 (92-128)||(30276-30312)
[»] scaffold0156 (1 HSPs)
scaffold0156 (51-391)||(37018-37358)
[»] scaffold2062 (1 HSPs)
scaffold2062 (51-386)||(757-1097)
[»] scaffold1426 (1 HSPs)
scaffold1426 (10-391)||(1451-1832)
[»] scaffold0222 (3 HSPs)
scaffold0222 (295-386)||(616-707)
scaffold0222 (25-137)||(21147-21259)
scaffold0222 (327-386)||(20898-20957)
[»] scaffold0190 (2 HSPs)
scaffold0190 (271-394)||(30431-30554)
scaffold0190 (24-136)||(30184-30296)
[»] scaffold0118 (2 HSPs)
scaffold0118 (292-391)||(540-639)
scaffold0118 (10-137)||(794-921)
[»] scaffold0001 (2 HSPs)
scaffold0001 (292-391)||(514479-514578)
scaffold0001 (51-137)||(514238-514324)
[»] scaffold0529 (1 HSPs)
scaffold0529 (89-391)||(5167-5469)
[»] scaffold0058 (1 HSPs)
scaffold0058 (25-391)||(22201-22567)
[»] scaffold1517 (2 HSPs)
scaffold1517 (295-386)||(1616-1707)
scaffold1517 (10-136)||(1331-1457)
[»] scaffold1288 (1 HSPs)
scaffold1288 (324-391)||(13-80)
[»] scaffold0367 (1 HSPs)
scaffold0367 (51-386)||(8906-9241)
[»] scaffold0266 (1 HSPs)
scaffold0266 (51-346)||(16761-17056)
[»] scaffold0053 (2 HSPs)
scaffold0053 (25-344)||(62631-62950)
scaffold0053 (89-386)||(65221-65518)
[»] scaffold0035 (2 HSPs)
scaffold0035 (52-391)||(5884-6223)
scaffold0035 (268-391)||(41210-41333)
[»] scaffold0068 (2 HSPs)
scaffold0068 (325-391)||(67267-67333)
scaffold0068 (51-137)||(66993-67079)
[»] scaffold0765 (1 HSPs)
scaffold0765 (286-386)||(6377-6477)
[»] scaffold0708 (2 HSPs)
scaffold0708 (271-391)||(5250-5370)
scaffold0708 (24-128)||(5003-5107)
[»] scaffold0203 (1 HSPs)
scaffold0203 (75-386)||(763-1074)
[»] scaffold0023 (3 HSPs)
scaffold0023 (327-386)||(164562-164621)
scaffold0023 (25-137)||(164260-164372)
scaffold0023 (338-390)||(47155-47207)
[»] scaffold0282 (2 HSPs)
scaffold0282 (235-397)||(13548-13710)
scaffold0282 (87-136)||(13395-13444)
[»] scaffold0076 (2 HSPs)
scaffold0076 (324-386)||(53581-53643)
scaffold0076 (25-137)||(53282-53394)
[»] scaffold0317 (1 HSPs)
scaffold0317 (24-137)||(2964-3077)
[»] scaffold1530 (2 HSPs)
scaffold1530 (24-140)||(834-950)
scaffold1530 (329-391)||(662-724)
[»] scaffold0706 (2 HSPs)
scaffold0706 (327-386)||(5370-5429)
scaffold0706 (24-165)||(5067-5208)
[»] scaffold0293 (2 HSPs)
scaffold0293 (235-394)||(15486-15645)
scaffold0293 (89-136)||(15744-15791)
[»] scaffold0235 (2 HSPs)
scaffold0235 (51-386)||(8347-8682)
scaffold0235 (51-386)||(18561-18896)
[»] scaffold0074 (3 HSPs)
scaffold0074 (324-391)||(15202-15269)
scaffold0074 (235-397)||(6186-6348)
scaffold0074 (52-137)||(15405-15490)
[»] scaffold0072 (2 HSPs)
scaffold0072 (327-386)||(54131-54190)
scaffold0072 (24-137)||(54380-54493)
[»] scaffold0009 (1 HSPs)
scaffold0009 (324-391)||(251701-251768)
[»] scaffold2165 (2 HSPs)
scaffold2165 (325-383)||(962-1020)
scaffold2165 (51-137)||(688-774)
[»] scaffold1373 (1 HSPs)
scaffold1373 (333-391)||(1-59)
[»] scaffold0348 (3 HSPs)
scaffold0348 (324-386)||(17642-17704)
scaffold0348 (324-386)||(5007-5069)
scaffold0348 (25-137)||(17343-17455)
[»] scaffold0114 (3 HSPs)
scaffold0114 (325-386)||(40142-40203)
scaffold0114 (25-137)||(40391-40503)
scaffold0114 (310-391)||(17493-17574)
[»] scaffold1845 (1 HSPs)
scaffold1845 (10-137)||(1148-1275)
[»] scaffold1299 (1 HSPs)
scaffold1299 (327-386)||(2009-2068)
[»] scaffold0298 (1 HSPs)
scaffold0298 (327-386)||(9388-9447)
[»] scaffold0005 (1 HSPs)
scaffold0005 (287-386)||(263310-263409)
[»] scaffold0003 (1 HSPs)
scaffold0003 (287-386)||(203465-203564)
[»] scaffold0476 (3 HSPs)
scaffold0476 (324-386)||(703-765)
scaffold0476 (51-137)||(430-516)
scaffold0476 (340-394)||(10862-10916)
[»] scaffold0167 (2 HSPs)
scaffold0167 (337-391)||(1199-1253)
scaffold0167 (24-165)||(5358-5499)
[»] scaffold0239 (1 HSPs)
scaffold0239 (337-386)||(9957-10006)
[»] scaffold0146 (1 HSPs)
scaffold0146 (8-165)||(126-283)
[»] scaffold0017 (3 HSPs)
scaffold0017 (8-137)||(4295-4424)
scaffold0017 (287-391)||(24385-24489)
scaffold0017 (340-391)||(17240-17291)
[»] scaffold0605 (1 HSPs)
scaffold0605 (328-386)||(1364-1422)
[»] scaffold0139 (1 HSPs)
scaffold0139 (327-391)||(19130-19194)
[»] scaffold0011 (3 HSPs)
scaffold0011 (327-391)||(151646-151710)
scaffold0011 (51-165)||(153797-153911)
scaffold0011 (10-136)||(23377-23503)
[»] scaffold0276 (1 HSPs)
scaffold0276 (54-137)||(23811-23894)
[»] scaffold0261 (2 HSPs)
scaffold0261 (320-391)||(12502-12573)
scaffold0261 (320-391)||(20682-20753)
[»] scaffold0434 (1 HSPs)
scaffold0434 (51-137)||(5787-5873)
[»] scaffold0507 (1 HSPs)
scaffold0507 (235-391)||(11107-11263)
[»] scaffold0012 (2 HSPs)
scaffold0012 (235-391)||(216489-216645)
scaffold0012 (89-136)||(216343-216390)
[»] scaffold0148 (1 HSPs)
scaffold0148 (325-391)||(2078-2144)
[»] scaffold0031 (2 HSPs)
scaffold0031 (51-137)||(115957-116043)
scaffold0031 (353-391)||(110689-110727)
[»] scaffold0018 (2 HSPs)
scaffold0018 (86-136)||(9271-9321)
scaffold0018 (325-391)||(23457-23523)
[»] scaffold0040 (3 HSPs)
scaffold0040 (343-391)||(17957-18005)
scaffold0040 (89-136)||(18179-18226)
scaffold0040 (340-391)||(111081-111132)
[»] scaffold1600 (1 HSPs)
scaffold1600 (89-136)||(405-452)
[»] scaffold0679 (1 HSPs)
scaffold0679 (235-302)||(1092-1159)
[»] scaffold0188 (1 HSPs)
scaffold0188 (24-131)||(33230-33337)
[»] scaffold0098 (1 HSPs)
scaffold0098 (239-302)||(25640-25703)
[»] scaffold0490 (1 HSPs)
scaffold0490 (25-119)||(3216-3310)
[»] scaffold0621 (2 HSPs)
scaffold0621 (340-391)||(96-147)
scaffold0621 (340-391)||(4513-4564)
[»] scaffold0550 (1 HSPs)
scaffold0550 (340-391)||(10332-10383)
[»] scaffold0207 (1 HSPs)
scaffold0207 (340-391)||(7913-7964)
[»] scaffold0181 (1 HSPs)
scaffold0181 (340-391)||(29102-29153)
[»] scaffold0120 (1 HSPs)
scaffold0120 (340-391)||(11343-11394)
[»] scaffold0079 (1 HSPs)
scaffold0079 (340-391)||(36577-36628)
[»] scaffold0075 (1 HSPs)
scaffold0075 (340-391)||(55644-55695)
[»] scaffold0324 (1 HSPs)
scaffold0324 (78-136)||(2323-2381)
[»] scaffold1459 (1 HSPs)
scaffold1459 (310-391)||(1176-1257)
[»] scaffold0412 (1 HSPs)
scaffold0412 (298-391)||(15711-15804)
[»] scaffold0028 (1 HSPs)
scaffold0028 (342-391)||(18016-18065)
[»] scaffold0006 (1 HSPs)
scaffold0006 (90-135)||(104561-104606)
[»] scaffold0819 (1 HSPs)
scaffold0819 (210-278)||(306-374)
[»] scaffold0410 (1 HSPs)
scaffold0410 (343-391)||(220-268)
[»] scaffold0008 (1 HSPs)
scaffold0008 (89-137)||(139533-139581)


Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 8 - 391
Target Start/End: Complemental strand, 20391585 - 20391202
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || |||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||    
T  20391585 cgaagccctacagtgctcctgctgacaaagggaaacaaagattgaatgatgagaggagacctaagagtagagatgttccttctgagattgtttgctacaa 20391486  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     
T  20391485 gtgtggtgagaagggccacaagagtaatgtttccaatggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatactatagcggaatgcaagcgt 20391386  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattgg 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  20391385 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaagcctaagaaggctcagacaggtggaaaggtgtttgcattga 20391286  T
Q  308 caggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20391285 ctggtacgcagacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaatttctattattgata 20391202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 8 - 302
Target Start/End: Original strand, 6606751 - 6607045
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || ||||  ||||| |||  | ||||| | ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  6606751 cgaagccctacagtgttcctattgacagaggagagcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaa 6606850  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||| |||||| ||||| |||||||||||||| |||||||||||     
T  6606851 gtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgt 6606950  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    || ||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |   | |||||||||| |  ||||||||| |||||||||||    
T  6606951 ggggatattgtttgcttcaattgtgatgaagaaggacatctcagttcacagtgtacacagcctaagaaggttaggacaggtggcaaggtgtttgc 6607045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 25 - 391
Target Start/End: Complemental strand, 22374351 - 22373985
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||| |||||| ||||||||    ||||| || ||||| |||| ||| ||||||   |||||||||||||| || | |||||||||||| || | ||    
T  22374351 cctgctgtcaaaggtaaacaaagacttaatgaggagaggaggcctaggaggagagattctcctactgagattgtctgtttcaagtgtggtgaaaaagacc 22374252  T
Q  125 acaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgctt 224  Q
    ||||||||||||| ||  |   |||||| || ||||| ||    ||||| |||||||| || ||  |||| || |||||||| ||||||||||||||||     
T  22374251 acaagagtaatgtatgtgaccgtgatgaaaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagcgtggtgatattgtttgcta 22374152  T
Q  225 caattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtt 324  Q
     |||||||| |||||||||||| |||| |||||||||||||| |||||||||||||  |||||||| ||||||||||| ||| | ||||| || || |||    
T  22374151 taattgtgatgaagaaggtcatattagctcgcagtgcaggaagcctaagaaggctctaacaggtggcaaggtgtttgctttgactggtacccaaactgtt 22374052  T
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22374051 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 22373985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 54 - 391
Target Start/End: Complemental strand, 19985633 - 19985296
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| ||||| |||||||| |||||||  ||||||||||||||||| | ||||||||| || ||  |||||||||||||||| ||  |   |||||||    
T  19985633 tgatgagaggaggcctaagaggagagatgctcctactgagattgtttgtttcaagtgtggcgaaaaaagccacaagagtaatgtatgtgaccgtgatgag 19985534  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    || ||||  |||  ||||||  ||||| | || ||  |||| || |||||| | || ||| |||||||||  |||||||| ||||| || ||| |||| |    
T  19985533 aagaagtatttcagatgtggacagaaatgacacacattagctgattgcaagagtggggatgttgtttgctataattgtgatgaagaggggcatattagct 19985434  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttg 353  Q
    | ||||||| ||| |||||||||| || ||||||||| ||||| ||||||||| |  |||| || || || ||| |||||||||||||||||||||||||    
T  19985433 cacagtgcaagaagcctaagaaggttcggacaggtggcaaggtatttgcattgactagtacgcagactgtgaataaggaccgacttatcagaggtacttg 19985334  T
Q  354 tttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  19985333 tttctttaatagtactcctttaattgctattatagata 19985296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 21928911 - 21928544
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| ||   ||||||||| ||||| |||| ||| |||||||  |||||||||||| |||| | ||||||||| || ||||||    
T  21928911 tcctgctgacaaaggaaaacagaggctgaatgatgagaggaggcctaggaggagagatgctcctactgagattctttgtttcaagtgtggcgaaaagggc 21928812  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    ||| ||||||||||  |  |    |||||||| ||||| |||  ||||||  ||||||| || ||  | |  || |||||||| |||||| | |||||||    
T  21928811 cacgagagtaatgtaagtgaccgagatgagaagaagtgtttcagatgtggacagaaaggacacactttgggtgattgcaagcgtggtgatgtcgtttgct 21928712  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      |||||||| ||||| || ||| |||| || || |||| ||| || ||||||| || ||||||||| ||||||||||| ||| |  |||  || || ||    
T  21928711 ataattgtgatgaagaggggcatattagctcacaatgcaagaagcccaagaaggttcggacaggtggcaaggtgtttgctttgactagtaagcaaactgt 21928612  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21928611 gaatgaagaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 21928544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 391
Target Start/End: Original strand, 16268552 - 16268889
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| ||||| |||||||  |||||||  ||| ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||   |   ||||||    
T  16268552 tgatgacaggaggcctaagaagagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaaagatgag 16268651  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    |  |||||||||   |||||  |||| || ||||   |||| ||||||||||| || |||||||| |||| ||||||  | | ||| |||||| | ||||    
T  16268652 aggaagtgcttcaggtgtggtcagaagggtcatagcctagctgaatgcaagcgtggggatattgtctgctacaattgcaatggagagggtcatatcagtt 16268751  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttg 353  Q
    | |||||     | || |||||||||   || |||||||| |||||||| ||| | ||||| || ||    |||||||||||||||||||||||||||||    
T  16268752 cacagtgtcctgagccgaagaaggctagaactggtggaaaagtgtttgctttgactggtacgcagactaccaatgaggaccgacttatcagaggtacttg 16268851  T
Q  354 tttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16268852 tttctttaatagtactcctttaattgctattattgata 16268889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 28984132 - 28984027
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||||||||||||  || | |||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28984132 ggtggaaaggtgtttgctctgactggtacacagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 28984033  T
Q  386 ttgata 391  Q
    ||||||    
T  28984032 ttgata 28984027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 28989351 - 28989246
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||||||||||||  || | |||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28989351 ggtggaaaggtgtttgctctgactggtacacagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 28989252  T
Q  386 ttgata 391  Q
    ||||||    
T  28989251 ttgata 28989246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 22027840 - 22027945
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||| |||||||||||| | ||||| || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22027840 ggtggaaaagtgtttgcattgaccggtacgcagactactaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 22027939  T
Q  386 ttgata 391  Q
    | ||||    
T  22027940 tagata 22027945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 191 - 394
Target Start/End: Original strand, 31413997 - 31414200
Alignment:
Q  191 tagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtgg 290  Q
    |||| ||||| ||||| || || |||||||||| ||| ||  |||||||||||||| | ||||| ||||| |   |  | |||||||||   || |||||    
T  31413997 tagctgaatgtaagcgtggggacattgtttgctacaactgcaacgaagaaggtcatatcagttcacagtgtactcagtcgaagaaggctagaaccggtgg 31414096  T
Q  291 aaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgat 390  Q
     || |||||||||||| | ||||  || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31414097 gaaagtgtttgcattgactggtatgcagactactaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagat 31414196  T
Q  391 attg 394  Q
    ||||    
T  31414197 attg 31414200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 29301025 - 29301086
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29301025 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 29301086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 386
Target Start/End: Complemental strand, 22054084 - 22053984
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||| |||||||| ||| | ||||| || ||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22054084 ggtggaaaagtgtttgctttgactggtacgcagactactaatgaggaccgtcttatcagaggtacttgtttctttaatagtactcctttaattgctatta 22053985  T
Q  386 t 386  Q
    |    
T  22053984 t 22053984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 22027579 - 22027691
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || || ||||| | ||||||||| ||||| || || || |||||||  ||| ||||||| ||||| ||||||||||| || || ||||    
T  22027579 cctgctgacaagggaaagcaaagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatagtttgttacaagtgtggcgataaaggcc 22027678  T
Q  125 acaagagtaatgt 137  Q
    |||||||||||||    
T  22027679 acaagagtaatgt 22027691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 28984328 - 28984281
Alignment:
Q  90 tgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  28984328 tgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgt 28984281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 22375071 - 22375119
Alignment:
Q  343 agaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  22375071 agaggtacatgttactttgatagtactcctttaattgctattattgata 22375119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 21982451 - 21982518
Alignment:
Q  235 gaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||| ||||| ||||  ||||| |||||    
T  21982451 gaagaaggtcatattagttcgcagtgcaagaagcctaagaaggcccagactggtgtgaaggtttttgc 21982518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 21998937 - 21999004
Alignment:
Q  235 gaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||| ||||| ||||  ||||| |||||    
T  21998937 gaagaaggtcatattagttcgcagtgcaagaagcctaagaaggcccagactggtgtgaaggtttttgc 21999004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 21329843 - 21329776
Alignment:
Q  235 gaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||||||||||| |||||||| |||||| ||| ||||| ||||| ||||| ||||| ||||| |||||    
T  21329843 gaagaaggtcatattagttcgtagtgcaagaagcctaataaggcccagactggtgggaaggtttttgc 21329776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 22031270 - 22031219
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||   |||||| |||||||||| |||||||||||||||    
T  22031270 atcagaggtacttgttatattaataatactcctttagttgctattattgata 22031219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 20015628 - 20015678
Alignment:
Q  91 gagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgc 141  Q
    |||||||| || | ||| |||||||||||||||||||||||||| ||||||    
T  20015628 gagattgtgtgtttcaattgtggtgagaagggccacaagagtaacgtctgc 20015678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 5 - 391
Target Start/End: Original strand, 19486275 - 19486661
Alignment:
Q  5 gttcgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgcta 104  Q
    ||||||||||||||| || |||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  19486275 gttcgaagccctacagtgctcctgctgacaaagggaagcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgcta 19486374  T
Q  105 caagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaag 204  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  19486375 caagtgtggtgagaagggccacaagagtaatgtttgcaatggtgatgagaagaagtgcttccgatgtgggaagaaagggcatacgatagcggaatgcaag 19486474  T
Q  205 cgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcat 304  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  19486475 catggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaagcctaagaaggctcaggcaggtggaaagttgtttgcat 19486574  T
Q  305 tggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    || | ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19486575 tgactggtacgcaaacatttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgttattattgata 19486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 51 - 391
Target Start/End: Complemental strand, 21474854 - 21474514
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||| ||| |||||||  ||||||||||||||||| | |||||||||||| || ||||||||||||||||| ||  |   ||||    
T  21474854 gaatgatgagaggaggcctaggaggagagatgctcctactgagattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtatgtgaccgtgat 21474755  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||| |||| ||||||||||||||| || ||  | || || |||||||| ||||||||||| |||| ||||||||| ||||| |||||| |||    
T  21474754 gagaagaagtgtttccgatgtgggaagaaaggacacacattggctgagtgcaagcgtggtgatattgtgtgctacaattgtgatgaagagggtcatatta 21474655  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||| ||||||||||| ||||||||||||| ||||||||| ||||||||||| ||| | ||||| || ||   ||||||||||||||||||||||||||     
T  21474654 gttctcagtgcaggaaacctaagaaggctctgacaggtggcaaggtgtttgctttgactggtacgcaaacttctaatgaggaccgacttatcagaggtat 21474555  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  21474554 ttgtttctttaatagtactcctttaattgctattatagata 21474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 24 - 394
Target Start/End: Complemental strand, 25771125 - 25770755
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| ||   ||||||||| ||||| |||||||| |||||||  |||||||||||||| || | |||||||||||| || |||    
T  25771125 tcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaaaggc 25771026  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    ||||||| |||| | ||  |   ||||||||| ||||| || | |||||||| |||||| || ||  || | || |||||||| ||||||||||| ||||    
T  25771025 cacaagaataatttatgtgaccgtgatgagaagaagtgttttcgatgtgggacgaaaggacacacattatctgattgcaagcgtggtgatattgtgtgct 25770926  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||||||||| |||||||||||| |||| || ||||||||||| ||||||||||||| ||||||||| ||||||||| | ||| |  |||  || || ||    
T  25770925 acaattgtgatgaagaaggtcatattagctctcagtgcaggaaacctaagaaggctctgacaggtggcaaggtgtttcctttgactagtaagcaaactgt 25770826  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25770825 taataaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatattg 25770755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 32 - 282
Target Start/End: Complemental strand, 16813913 - 16813663
Alignment:
Q  32 acaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagag 131  Q
    |||||||| |||| || | ||||||||| |||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  16813913 acaaaggggaacagagattgaatgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagag 16813814  T
Q  132 taatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgt 231  Q
    |||||| ||||||| ||| ||||| |||||||||| ||||||||||||| |||| || ||||| ||||||||||| |||||||||||||| |||||||||    
T  16813813 taatgtttgcaatggtgaggagaagaagtgcttccgatgtgggaagaaatggcacacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgt 16813714  T
Q  232 gacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcag 282  Q
    || |||||||||||||||| ||| ||||||| ||| |||||||||| ||||    
T  16813713 gatgaagaaggtcatcttacttcacagtgcaagaagcctaagaagggtcag 16813663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 51 - 212
Target Start/End: Original strand, 8720732 - 8720893
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||||||| |||||||  |||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||     
T  8720732 gaatgatgagaggaggcctaagaggagagatgatcctgatgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgcaatggtgag 8720831  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtga 212  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||    
T  8720832 gagaagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtga 8720893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 53 - 302
Target Start/End: Original strand, 25958782 - 25959031
Alignment:
Q  53 atgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatga 152  Q
    ||||||| |||||||||||||| |||||||  |||||||||||||||||||||| ||||||| |||| ||||||| ||||||| ||||||||| ||| ||    
T  25958782 atgatgagaggagacctaagagtagagatgctcctactgagattgtttgctacaggtgtggtaagaaaggccacaggagtaatttctgcaatggtgagga 25958881  T
Q  153 gaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagt 252  Q
    ||| |||||||||| |||||||| ||| ||||||  |||||||||||| ||||  |  ||||| || || ||||| ||  | |||||||| ||  || ||    
T  25958882 gaagaagtgcttccgatgtgggaggaaggggcatctgatagcggaatgtaagcatgaagatatagtgtgtttcaactgcaatgaagaaggacacattggt 25958981  T
Q  253 tcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||||||||| ||| ||||||||| ||||| |||||||||  ||||||||    
T  25958982 tcgcagtgcaagaagcctaagaagcctcaggcaggtggaagagtgtttgc 25959031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 89 - 393
Target Start/End: Original strand, 30678089 - 30678393
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatac 188  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||| ||   || ||||| ||||  ||| ||    ||||| ||||||||||| |     
T  30678089 ctgaggttgtttgctacaagtgtggtgagaagagccacaagagtaatgtttgtcttggtgatgcgaaacggtgtttttgttgtggtaagaaagggcaaat 30678188  T
Q  189 gatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggt 288  Q
     ||  | || |||||||  | ||||||  | || ||||| ||| | |||||||||||  || |||||||||||| ||| ||||||||||||||| |  ||    
T  30678189 tattacagagtgcaagcatgatgatatgatgtgtttcaactgtaatgaagaaggtcacattggttcgcagtgcaagaagcctaagaaggctcaggctagt 30678288  T
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 388  Q
    || ||   |||||| ||| | |||||||| ||||| |||||||| ||  | ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  30678289 gggaaaacgtttgctttgactggtacacaaacagtgaatgaggatcggttgatcagaggtacatgtttctttaatagtacttctttaattgctattattg 30678388  T
Q  389 atatt 393  Q
    |||||    
T  30678389 atatt 30678393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 19456304 - 19455937
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||||||   ||||||||| ||||| || ||||| ||||||   ||||||||||||||||||| |||||||||||| || |||    
T  19456304 tcctgctgacaaaggaaaacaaaggctgaatgatgagaggaggcccaagaggagagatactcctactgagattgtttgcttcaagtgtggtgaaaaaggc 19456205  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||||||  ||   |||||||| |||||||||   ||  |  ||||||| || ||  |||  || || ||||| || || ||||||||||    
T  19456204 cacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtggtgtcagaaaggacacacactagatgattgtaagcgtggagacattgtttgct 19456105  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      || ||  |||| ||||||||| |||||||| |||| |   | || ||||||| |  ||| ||||| || ||||||||  || | ||||| || ||       
T  19456104 ataactgcaacgaggaaggtcatattagttcgtagtgtactcaaccaaagaaggttaggaccggtggtaaagtgtttgctctgactggtacgcaaaccac 19456005  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    || ||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19456004 tattgaggattttcttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 19455937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 19466449 - 19466082
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||||||   ||||||||| ||||| || ||||| ||||||   ||||||||||||||||||| |||||||||||| || |||    
T  19466449 tcctgctgacaaaggaaaacaaaggctgaatgatgagaggaggcccaagaggagagatactcctactgagattgtttgcttcaagtgtggtgaaaaaggc 19466350  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||||||  ||   |||||||| |||||||||   ||  |  ||||||| || ||  |||  || || ||||| || || ||||||||||    
T  19466349 cacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtggtgtcagaaaggacacacactagatgattgtaagcgtggagacattgtttgct 19466250  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      || ||  |||| ||||||||| |||||||| |||| |   | || ||||||| |  ||| ||||| || ||||||||  || | ||||| || ||       
T  19466249 ataactgcaacgaggaaggtcatattagttcgtagtgtactcaaccaaagaaggttaggaccggtggtaaagtgtttgctctgactggtacgcaaaccac 19466150  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    || ||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19466149 tattgaggattttcttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 19466082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 24 - 386
Target Start/End: Original strand, 14376916 - 14377278
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||| || ||||| || | ||||||||| |||||||| || || |||||||  |||  |||  |||||||||||||||| |||||||| |||    
T  14376916 tcctgctgacaagggaaaacagaggttgaatgatgagaggagacccaataggagagatgctcctgttgatgttgtttgctacaagtgcggtgagaaaggc 14377015  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| || | |   |||||||| |||||||||   |||||  ||||||| || ||  ||||  | || ||||| |||||| ||||||| |    
T  14377016 cacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctaattgtaagcgtggtgatgttgtttgtt 14377115  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      || ||  | ||||| || ||  | |||||||| || |   | || ||||||| |   || |||||||| |||||||||||| | ||||| || ||       
T  14377116 ataactgcaatgaagagggccacatcagttcgcaatgtacacagccgaagaaggttagaaccggtggaaaagtgtttgcattgactggtacgcagactac 14377215  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14377216 tagtgaggaccgacttatcagaggtacttgtttctttaatagtaatcctttaattgctattat 14377278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 90 - 387
Target Start/End: Complemental strand, 24367615 - 24367318
Alignment:
Q  90 tgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacg 189  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||       ||||| |  |||||||||   |||||  |||| || || |      
T  24367615 tgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagt 24367516  T
Q  190 atagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtg 289  Q
     |||| ||||||||||| || || ||||| || | ||||||  | | |||||||||| ||||||| ||||||    | || |||||  ||   || ||||    
T  24367515 ttagctgaatgcaagcggggggacattgtctgttacaattgcaatggagaaggtcatattagttcacagtgccctgaaccgaagaaaactagaactggtg 24367416  T
Q  290 gaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatt 387  Q
    | ||||||||||| ||| | ||||| || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24367415 ggaaggtgtttgctttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatt 24367318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 10466149 - 10466215
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10466149 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 10466215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 18797971 - 18797604
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||| || || ||||| | ||||||||| ||||| || ||||| || ||||  |||   || |||||||| || |||||||| ||||| |||    
T  18797971 tcctgctgacaagggaaagcaaagattgaatgatgagaggaggcccaagaggagggatgctcctgtggatattgtttgttataagtgtggcgagaaaggc 18797872  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| |||| |   |||||| | || || |||   |||||  |||| || || ||  |||| || |||||||| |||||  |||||||||    
T  18797871 cacaagagtaatgtttgcactaaagatgagcagaaatgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtggtgacgttgtttgct 18797772  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      || ||  | || ||||| ||| | ||||| |||||||   | || ||||||| |   || ||||| || |||||||||||| | ||||| || ||       
T  18797771 ataactgcaatgatgaaggccatatcagttcacagtgcactcaaccaaagaaggttagaaccggtgggaaagtgtttgcattgactggtacgcagactac 18797672  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18797671 tagtgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 18797604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 391
Target Start/End: Complemental strand, 19438255 - 19437916
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| ||||| || ||||| |||||||  ||| ||||||| ||| | ||||||||||||||||| ||||||  ||||||||| || | |   ||||    
T  19438255 aatgatgagaggaggcccaagaggagagatgctcctgctgagatcgttcgttacaagtgtggtgagaaaggccacttgagtaatgtttgtactaaagatg 19438156  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| ||||| |||   |||||  ||||||| || ||  |||| || |||||||| |||||| |||| || |  || ||  |||||||  | ||| | ||    
T  19438155 agaataagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgatgttgtatgttataactgcaacgaagagcgccatatcag 19438056  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    |||||||||||   | || ||||||| |  |||  |||| |||||||||||  || | ||||| || ||   || | |||| ||||||||||||||||||    
T  19438055 ttcgcagtgcacacagccgaagaaggttaggactagtggtaaggtgtttgctctgactggtacgcaaaccactagtaaggatcgacttatcagaggtact 19437956  T
Q  352 tgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  19437955 tgtttctttaatagtactcctttaattgctattatagata 19437916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 15462316 - 15462255
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15462316 aatgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 15462255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 24515717 - 24515776
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24515717 tgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 24515776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 10465875 - 10465960
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||||| ||||| || ||||| |||||||| ||| |||||||||| || |||||||||||||| || ||||||||||| ||||    
T  10465875 gaatgatgataggaggcccaagaggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatg 10465960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 24515414 - 24515527
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||| || ||||| ||   ||||||||| ||||| || ||||| |||||||  |||  ||| |||||||| || |||||||||||||| |||    
T  24515414 tcctgctgacaagggaaaacagaggctgaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgttataagtgtggtgagaaaggc 24515513  T
Q  124 cacaagagtaatgt 137  Q
    ||||||||||||||    
T  24515514 cacaagagtaatgt 24515527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 18182653 - 18182737
Alignment:
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    |||||||| |||| ||||||||| |   | || |||||||| |||| |||| |||||||||||||||||||||||||||||||||    
T  18182653 ggtacacagacagataatgaggatcatttgattagaggtacatgttactttgatagtactcctttaattgctattattgatattg 18182737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 34642848 - 34642948
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||| || |||||||| ||||| ||||| || || |  ||||| ||  |||||||||||||||||||||||||||||||||  |||||||| |||||||    
T  34642848 ggtgggaaagtgtttgccttggctggtacgcaaaccgcgaatgaagatagacttatcagaggtacttgtttctttaatagtatccctttaatcgctatta 34642947  T
Q  386 t 386  Q
    |    
T  34642948 t 34642948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 21567304 - 21567353
Alignment:
Q  337 cttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||    
T  21567304 cttatcagaggtacttgtttctttaatagtacttattcaattgctattat 21567353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 389
Target Start/End: Original strand, 23084970 - 23085190
Alignment:
Q  169 tgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaacc 268  Q
    ||||| |||||||||||||| ||  | ||||| ||||  | |||| |||| || || |||||  | ||||| | |||| || |||||||||||| ||| |    
T  23084970 tgtggtaagaaagggcatactattacagaatgtaagcatgatgatgttgtgtgttttaattgaaatgaagaggttcatattggttcgcagtgcaagaagc 23085069  T
Q  269 ctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtac 368  Q
    ||| |||||| |||||   |||||  |||||||| ||| |  |||  || ||||  |||||||||||| | || |||||||| ||||  ||| |||||||    
T  23085070 ctatgaaggcgcagactactggaagagtgtttgctttgactagtatgcagacagagaatgaggaccgattgattagaggtacatgttattttgatagtac 23085169  T
Q  369 tcctttaattgctattattga 389  Q
    ||||||| || ||||||||||    
T  23085170 tcctttagtttctattattga 23085190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 15462538 - 15462499
Alignment:
Q  103 tacaagtgtggtgagaagggccacaagagtaatgtctgca 142  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  15462538 tacaagtgtggtgcgaaaggccacaagagtaatgtctgca 15462499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 16924956 - 16925007
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||   |||||| |||||||||| |||||||||||||||    
T  16924956 atcagaggtacttgttatattaataatactcctttagttgctattattgata 16925007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Original strand, 5836544 - 5836598
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    |||||||||||||| |   |||||| |||||||||| ||||||||||||||||||    
T  5836544 atcagaggtacttgctatattaataatactcctttagttgctattattgatattg 5836598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 25115517 - 25115463
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    |||||||||||||| |   |||||| |||||||||| ||||||||||||||||||    
T  25115517 atcagaggtacttgctatattaataatactcctttagttgctattattgatattg 25115463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 292; Significance: 1e-164; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 8 - 391
Target Start/End: Original strand, 21983198 - 21983581
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || |||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| |     
T  21983198 cgaagccctacagtgttcctgctgacaaagggaagcaaagattgaatgatgagaggagacctaagagaagagatgttcctgctgagattgtttgctatag 21983297  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  21983298 gtgtggtgagaagggccacaagagtaatgttcgcaatggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatacgatagcggaatgcaagcgt 21983397  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattgg 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||     
T  21983398 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaagcctaagaaggctcaggcaggtggaaaggtgtttgcattga 21983497  T
Q  308 caggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    | | ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21983498 ctgttacgcagacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattactattattgata 21983581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 8 - 391
Target Start/End: Original strand, 21561046 - 21561429
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || | |||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||    
T  21561046 cgaagccctacagtgctactgctgacaaagggaaacaaagattgaatgatgagaggagacctaagagaagagatgttcctgctgagattgtttgcttcaa 21561145  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    ||||||| ||||||||||||||||||||||  |||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |     
T  21561146 gtgtggtaagaagggccacaagagtaatgttagcaatggtgttgagaaaaagtgcttccgatgtgggaagaaagggcatacgatagcgaaatgcaagtgt 21561245  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattgg 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||||||||||||||||||||     
T  21561246 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaagcataagaaggcttaggcaggtggaaaggtgtttgcattga 21561345  T
Q  308 caggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    | ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21561346 ctggtatgcaaacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtacttctttaattgctattattgata 21561429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 8 - 302
Target Start/End: Complemental strand, 23669979 - 23669685
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || ||||| |||||||||  | ||||| | ||||||||| |||||||||||||| |||||||  ||| |||||||||||| |||| |    
T  23669979 cgaagccctacagtgctcctgttgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgctcctgctgagattgtttcctacca 23669880  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||||||||| ||||||||||||||||| ||||||| ||| ||||| |||||||||| |||||| ||||| |||||||||||||| |||||||||||     
T  23669879 gtgtggtgagaaaggccacaagagtaatgtttgcaatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgt 23669780  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| ||| ||||||||||||||| || |||||| |||||||||    
T  23669779 ggtgatattgtttgcttcaaatgtgacgaagaaggtcaccttagctcgcagtgcaagaatcctaagaaggctcagtcaagtggaagggtgtttgc 23669685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 54 - 349
Target Start/End: Original strand, 16258103 - 16258398
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| |||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||    
T  16258103 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggag 16258202  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||    
T  16258203 aagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagtt 16258302  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggta 349  Q
    ||||||||| ||| |||||||||| |||| |  ||||||  |||||||| || || ||||| || ||||  |||||||| || || ||| ||||||    
T  16258303 cgcagtgcaagaagcctaagaagggtcaggcgagtggaagagtgtttgctttagctggtactcagacagcgaatgaggatcgtctgatctgaggta 16258398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 54 - 349
Target Start/End: Original strand, 22591822 - 22592117
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| |||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||    
T  22591822 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggag 22591921  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    || |||||||||| ||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||    
T  22591922 aagaagtgcttccgatgggggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagtt 22592021  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggta 349  Q
    ||||||||| ||| |||||||||| |||| |  ||||||  |||||||| || || ||||| || ||||  |||||||| || || ||| ||||||    
T  22592022 cgcagtgcaagaagcctaagaagggtcaggcgagtggaagagtgtttgctttagctggtactcagacagcgaatgaggatcgtctgatctgaggta 22592117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 54 - 349
Target Start/End: Original strand, 22595377 - 22595672
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| |||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||    
T  22595377 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggag 22595476  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    || |||||||||| ||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||    
T  22595477 aagaagtgcttccgatgggggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagtt 22595576  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggta 349  Q
    ||||||||| ||| |||||||||| |||| |  ||||||  |||||||| || || ||||| || ||||  |||||||| || || ||| ||||||    
T  22595577 cgcagtgcaagaagcctaagaagggtcaggcgagtggaagagtgtttgctttagctggtactcagacagcgaatgaggatcgtctgatctgaggta 22595672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 8 - 302
Target Start/End: Complemental strand, 43122814 - 43122520
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || || || |||||||||  | ||||| | ||||||||| |||||||||||||| |||||||| | | | |||||||||||||||||    
T  43122814 cgaagccctacagtgctcatgttgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgttcatgcagagattgtttgctacaa 43122715  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||| |||| |||||||||||||||||||||||||| ||| ||||| |||||||||| |||||| ||||| |||||| ||||||| |||||||||||     
T  43122714 gtgtggcgagaggggccacaagagtaatgtctgcaatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatgcgatagctgaatgcaagcgt 43122615  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |   | |||||||||| |  ||||||||| |||||||||||    
T  43122614 ggtgatattgtttgcttcaattgtgacgaagaaggacatctcagttcacagtgtacacagcctaagaaggttaggacaggtggcaaggtgtttgc 43122520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 56 - 386
Target Start/End: Original strand, 23563237 - 23563567
Alignment:
Q  56 atgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaa 155  Q
    |||| ||||| || ||||| |||||||  |||||||| |||||||||| |||||||||||| || ||||||||||||||||||||  ||   ||||||||    
T  23563237 atgagaggaggcccaagaggagagatgctcctactgacattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaa 23563336  T
Q  156 aaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcg 255  Q
     |||||||||   |||||  ||||||| || ||  |||| || || ||| | || || | |||||| |  || ||  | || ||||||||| ||||||||    
T  23563337 gaagtgcttcaggtgtggtcagaaaggacacacactagctgactgtaagggtggagacaatgtttgttataactgcaatgaggaaggtcatattagttcg 23563436  T
Q  256 cagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtt 355  Q
    ||||| | | | || ||||||| |  ||| ||||| ||||||||||| ||| | ||||| || |||  ||||||||||||||||||||||||||||||||    
T  23563437 cagtgtacgcagccgaagaaggttaggactggtggtaaggtgtttgctttgaccggtacgcaaacaactaatgaggaccgacttatcagaggtacttgtt 23563536  T
Q  356 tctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||||||||||||| ||||||    
T  23563537 tctttaatagtactcctttaattgatattat 23563567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 89 - 387
Target Start/End: Original strand, 21631501 - 21631799
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatac 188  Q
    ||||| ||||||||||||  ||||||||||| ||||||| ||||||||  || | ||  |||| ||||   || ||||| ||||| |||||| |||||||    
T  21631501 ctgaggttgtttgctacacttgtggtgagaaaggccacacgagtaatgcttgtactggggatgtgaaacgatgtttccattgtggtaagaaatggcatac 21631600  T
Q  189 gatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggt 288  Q
     ||  | ||||| ||||  | |||| | || || ||||| ||  | |||||||||||| || |||||||||||| ||| |||||||||||||||||  ||    
T  21631601 tattacagaatgtaagcatgatgatgtggtgtgtttcaactgcaatgaagaaggtcatattggttcgcagtgcaagaagcctaagaaggctcagactagt 21631700  T
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatt 387  Q
    || || |||||||| ||| | |||||||| ||||| |||||||||||  | || |||||||| |||| |||| ||||||||||||||||||||||||||    
T  21631701 gggaaagtgtttgctttgactggtacacagacagtgaatgaggaccggttgattagaggtacatgttactttgatagtactcctttaattgctattatt 21631799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 95 - 386
Target Start/End: Complemental strand, 20824713 - 20824422
Alignment:
Q  95 ttgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagc 194  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||  |||| |   |||||||| || || |||  ||| ||  ||||||| |||  | | |     
T  20824713 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggt 20824614  T
Q  195 ggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcag-acaggtggaaa 293  Q
    ||| |||||||| || ||||||||||| || || ||||  || ||||||||  ||||||||||||||| | | |||||||||| |||| || || |||||    
T  20824613 ggactgcaagcgtggagatattgtttgttttaactgtggtgatgaaggtcacattagttcgcagtgcacgcaacctaagaagg-tcaggactggaggaaa 20824515  T
Q  294 ggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
     || ||||| ||| | ||||| || ||    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20824514 agtatttgctttgactggtacgcagactaccaatgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 20824422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 391
Target Start/End: Original strand, 23077942 - 23078309
Alignment:
Q  24 tcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaaggg 122  Q
    |||||||||||||||||| || ||| | ||||||||| ||||| || ||||| |||||||  ||| |||||||||| || | |||||||||||| || ||    
T  23077942 tcctgctgacaaagggaagcagaagat-gaatgatgataggaggcccaagaggagagatgctcctgctgagattgtatgtttcaagtgtggtgaaaaagg 23078040  T
Q  123 ccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgc 222  Q
    |||||| || ||||  ||   |   |||||||  || || |||   |||||  ||||||| || ||  |||| ||||| ||||| || || |||||||||    
T  23078041 ccacaaaagcaatgcttgtggtagagatgagaggaaatgtttcaggtgtggtcagaaaggacacaccctagctgaatgtaagcgtggagacattgtttgc 23078140  T
Q  223 ttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacag 322  Q
    | ||| ||  |||||||||||||| | |||||  |||| |   | || |||||||||  ||| ||||| || |||||||||||| |  |||| || ||      
T  23078141 tacaactgcaacgaagaaggtcatatcagttcatagtgtactcagccgaagaaggctaggaccggtgggaaagtgtttgcattgactagtacgcagacta 23078240  T
Q  323 ttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23078241 ctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 23078309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 14884328 - 14884395
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14884328 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 14884395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 325 - 391
Target Start/End: Complemental strand, 20345312 - 20345246
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20345312 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 20345246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 22505742 - 22505643
Alignment:
Q  292 aaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||| | ||||| || ||    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22505742 aaggtgtttgcattgactggtacgcagactaccaatgaggaccgacttatcaaaggtacttgtttctttaatagtactcctttaattgctattattgata 22505643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 20778944 - 20778882
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20778944 taatgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 20778882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 325 - 391
Target Start/End: Complemental strand, 25851102 - 25851036
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25851102 aatgaggaccgtcttatcagaggtacttgtttctttaatagtactcatttaattgctattattgata 25851036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 22464977 - 22464919
Alignment:
Q  328 gaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22464977 gaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 22464919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 28892279 - 28892341
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28892279 taatgaggatcgacttatcagaggtacttgtttctttaatggtactcctttaattgctattat 28892341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 22506024 - 22505897
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaag 108  Q
    ||||| |||| || ||||||||||||||| || || ||| | ||||||||| ||||| |||||||| |||||||  ||| ||||||||||||| ||||||    
T  22506024 aagccttacagtgctcctgctgacaaaggaaagcagaagat-gaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaag 22505926  T
Q  109 tgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||||| ||||||||||| |||||    
T  22505925 tgtggtgagaaaggccacaagagcaatgt 22505897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 17266671 - 17266733
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  17266671 taatgaggaccgtctcatcaaaggtacttgtttctttaatagtactcctttaattgctattat 17266733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 14884058 - 14884144
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctg 140  Q
    |||||| ||||| || ||||| |||||||  ||  ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  14884058 tgatgataggaggcccaagaggagagatgctccagctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtctg 14884144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 20345583 - 20345500
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  ||| ||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  20345583 tgatgataggaggcccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaagcccacaagagtaatgt 20345500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 25851337 - 25851290
Alignment:
Q  90 tgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  25851337 tgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 25851290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 21870342 - 21870428
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||  ||||| |||||||| |||||||  |||||||||||  |||||| ||||||||||||||| | |||||||||||||||    
T  21870342 gaatgatgggaggaggcctaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaagaccacaagagtaatgt 21870428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 21874622 - 21874708
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||  ||||| |||||||| |||||||  |||||||||||  |||||| ||||||||||||||| | |||||||||||||||    
T  21874622 gaatgatgggaggaggcctaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaagaccacaagagtaatgt 21874708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 383
Target Start/End: Complemental strand, 21410297 - 21410124
Alignment:
Q  210 tgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggca 309  Q
    |||||| |||||||| || ||||  |||||||| ||| ||||  | ||||| | ||| ||||| || |||||| |  || | ||||||||||| || ||     
T  21410297 tgatatagtttgctttaaatgtggtgaagaaggacatattagccctcagtgtaagaaacctaataaagctcagtctagttgcaaggtgtttgctttagct 21410198  T
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctat 383  Q
    |||||  | ||||  |||||||| || || ||||||||||| |||||| ||||||||||||| |||||| ||||    
T  21410197 ggtacttagacagagaatgaggatcgtctgatcagaggtacatgtttcattaatagtactcccttaattactat 21410124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 23474478 - 23474431
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  23474478 ctgagattgtttgctacacttgtggtgagaaaggccataagagtaatg 23474431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 26736080 - 26736131
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  26736080 atcagaggtacttgttattttgatagtacacctttagttgctattattgata 26736131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 23461004 - 23460950
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    |||||||||||||| |   |||||| |||||||||| ||||||||||||||||||    
T  23461004 atcagaggtacttgctgtattaataatactcctttagttgctattattgatattg 23460950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 27613638 - 27613588
Alignment:
Q  91 gagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgc 141  Q
    |||||||| || | ||| ||||||||||||||||||||||| |||||||||    
T  27613638 gagattgtgtgtttcaattgtggtgagaagggccacaagagcaatgtctgc 27613588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 20779173 - 20779132
Alignment:
Q  95 ttgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||    
T  20779173 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 20779132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 28892050 - 28892091
Alignment:
Q  95 ttgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||    
T  28892050 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 28892091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 10 - 386
Target Start/End: Original strand, 12203628 - 12204004
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagt 109  Q
    |||||||||| || |||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||||| ||| ||| |||||||||||||||||    
T  12203628 aagccctacagtgctcctgctgacaaagggaaacaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgtgattgtttgctacaagt 12203727  T
Q  110 gtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcgg 209  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||| |     
T  12203728 gtggtgagaagggccacaagagtaatgtttgtaatggtgatgagaaaaagtgcttctgatgtgggaagaaagggcatacgatagctgaatgcaagcgtga 12203827  T
Q  210 tgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggca 309  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |     
T  12203828 tgatattgtttgcttcaattgtgatgaagaaggtcatcttagctcgcaatgcaggaagcctaagaaggctcagacaggtggaaaggtgtttgcattgacc 12203927  T
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| | || ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12203928 ggtacatagacggttaatgaggatcgacttatcagaggtacttgtttctttaatagtaatcctttaattgctattat 12204004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 25 - 391
Target Start/End: Complemental strand, 19150417 - 19150051
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || || || || | ||||||||| ||||| |||||||| |||||||  |||||||| |||||||||| ||||||||||||||| ||||    
T  19150417 cctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttgcttcaagtgtggtgagaaaggcc 19150318  T
Q  125 acaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgctt 224  Q
    |||| |||||||| ||  ||   ||| |||| ||||||||    |||||  ||||||| || ||  | || || |||||||| || |||||||||||||     
T  19150317 acaacagtaatgtgtgtgatcgagatcagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggagatattgtttgcta 19150218  T
Q  225 caattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtt 324  Q
    ||| ||| | |||||||| ||| ||||||||||||| | | | ||||||||||||  || |||||| || || ||||| ||| | ||||| || || ||     
T  19150217 caactgtaatgaagaaggacatattagttcgcagtgtacgcaacctaagaaggctaggataggtggtaaagtatttgcgttgactggtacgcaaactgtg 19150118  T
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19150117 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 19150051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 25 - 391
Target Start/End: Complemental strand, 20749816 - 20749450
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || || || || | ||||||||| ||||| |||||||| |||||||  |||||||| |||||||||| ||||||||||||||| ||||    
T  20749816 cctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttgcttcaagtgtggtgagaaaggcc 20749717  T
Q  125 acaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgctt 224  Q
    |||| |||||||| ||  ||   ||| |||| ||||||||    |||||  ||||||| || ||  | || || |||||||| || |||||||||||||     
T  20749716 acaacagtaatgtgtgtgatcgagatcagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggagatattgtttgcta 20749617  T
Q  225 caattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtt 324  Q
    ||| ||| | |||||||| ||| ||||||||||||| | | | ||||||||||||  || |||||| || || ||||| ||| | ||||| || || ||     
T  20749616 caactgtaatgaagaaggacatattagttcgcagtgtacgcaacctaagaaggctaggataggtggtaaagtatttgcgttgactggtacgcaaactgtg 20749517  T
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20749516 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 20749450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 24 - 391
Target Start/End: Original strand, 12798346 - 12798710
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||| || || || || | ||||||||| ||||| |  ||||| |||||||  | |||||| |||||||| | |||||||||    || |||    
T  12798346 tcctgctgacaagggtaagcagagattgaatgatgagaggaggctcaagaggagagatgctcatactgatattgtttgtttcaagtgtgga---aaaggc 12798442  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| ||  |    |||||||| |||||||||   |||||  ||||||| || ||  |||| || ||  |||| || ||| |||||||||    
T  12798443 cacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgtgagcgtggggatgttgtttgct 12798542  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||| ||| | |||||||||||| | ||||||||||| |   | ||||||||||||  ||||||||| ||||| ||||| ||| | ||||| || |||||    
T  12798543 acaactgtaatgaagaaggtcatatcagttcgcagtgtacacagcctaagaaggctaggacaggtggcaaggtttttgcgttgactggtacgcaaacagt 12798642  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12798643 gaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 12798710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 51 - 391
Target Start/End: Original strand, 14261115 - 14261455
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||||| | ||| |||  |||||||||||| |||||| ||||||||||||||| |||||||||||||||||  |  ||   |||    
T  14261115 gaatgatgagaggaggcctaaggggagatatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgcgtcatcgagat 14261214  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||| |||    ||| |  ||||||| || ||  | || || |||||||| || ||||||||||||| ||| ||| | || ||||| ||| |||    
T  14261215 gagaagaagtactttaggtgtagtcagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaaggacatatta 14261314  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||||||||  | | | |||||||||| |  ||||||||| ||||| ||||| ||| | ||||| || ||  | ||||||||||||||||||||||||||    
T  14261315 gttcgcagtttatgcagcctaagaaggttaggacaggtggcaaggtatttgcgttgactggtacgcaaactatgaatgaggaccgacttatcagaggtac 14261414  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    || ||||||||||||||||||||||||||||||||| ||||    
T  14261415 ttatttctttaatagtactcctttaattgctattatagata 14261455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 391
Target Start/End: Original strand, 13965540 - 13965877
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| ||||| || ||||| |||||||  ||| ||||||||| ||||||||||||||||||||| | ||||||||||||||| ||   |   |||||     
T  13965540 tgatgataggaggcccaagaggagagatgctcctgctgagattgattgctacaagtgtggtgagaaagaccacaagagtaatgtttgtggtaaagatgat 13965639  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    | ||| ||||||   |||||  |||| || || |   |||| ||||||||||| || |||||||| |||| ||||||  | | ||| |||||| | ||||    
T  13965640 agaaaatgcttcaggtgtggtcagaagggtcacagtctagctgaatgcaagcgtggggatattgtctgctacaattgcaatggagagggtcatatcagtt 13965739  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttg 353  Q
    | |||||     | || |||||||||   || ||||| ||||||||||||||| | ||||| || ||    |||||||||||||||||||||||||||||    
T  13965740 cacagtgtcctgagccgaagaaggctagaactggtgggaaggtgtttgcattgactggtacgcagactaccaatgaggaccgacttatcagaggtacttg 13965839  T
Q  354 tttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13965840 tttctttaatagtactcctttaattgctattattgata 13965877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 52 - 391
Target Start/End: Original strand, 15099473 - 15099812
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||  ||||| || ||||| |||||||  |||||||| || ||||||| ||||||||||||||| |||||||||||||| || ||  ||   ||||    
T  15099473 aatgatgggaggaggcccaagaggagagatgctcctactgacatagtttgcttcaagtgtggtgagaaaggccacaagagtaacgtttgtgatagagatg 15099572  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| |||||||||   |||||  |||| || || ||  |||  || || ||||| || || || ||||| |  || ||  | || ||||||||| | ||    
T  15099573 agaagaagtgcttcaggtgtggtcagaagggacacactctagatgattgtaagcgtggggacatcgtttgttataactgcaatgaggaaggtcatatcag 15099672  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    ||||||||| | | | || ||||||| |  ||||||||| ||||||||||| ||  | ||||  || ||||||||||||||||||||||||||| |||||    
T  15099673 ttcgcagtgtacgcagccgaagaaggttaggacaggtggtaaggtgtttgctttaactggtatgcagacagttaatgaggaccgacttatcagatgtact 15099772  T
Q  352 tgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  15099773 tgtttctttaatagtactcctttaattgctattatagata 15099812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 394
Target Start/End: Original strand, 26115418 - 26115802
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaag 108  Q
    ||||| |||| || ||||||||||||||| || || ||| | || |||||| ||||| || ||||| |||||||  ||  ||||||||||||| ||||||    
T  26115418 aagccttacagtgctcctgctgacaaaggaaagcagaagat-gagtgatgataggaggcccaagaggagagatgctccggctgagattgtttgttacaag 26115516  T
Q  109 tgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcg 208  Q
    ||||||||||| ||||||||||||||||| ||       ||||| |  |||||||||   |||||  |||| || || |   |||| ||||||||||| |    
T  26115517 tgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtg 26115616  T
Q  209 gtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtg-caggaaccctaagaaggctcagacaggtggaaaggtgtttgcattgg 307  Q
    | || ||||| || | ||||||  | | |||||||||| ||||| | ||||| |  |||||  |||||| ||   || ||||||||||||||||| |||     
T  26115617 gggacattgtctgttacaattgcaatggagaaggtcatattagtacacagtgtcctgaaccg-aagaagactagaactggtggaaaggtgtttgctttga 26115715  T
Q  308 caggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    | ||||| || ||   ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26115716 ctggtacgcacactcctaatgaggaccgactcatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 26115802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 26091902 - 26092007
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||||||||| ||| | ||||| || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26091902 ggtggaaaggtgtttgctttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 26092001  T
Q  386 ttgata 391  Q
    ||||||    
T  26092002 ttgata 26092007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 49155446 - 49155341
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||||||||| ||| | ||||| || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49155446 ggtggaaaggtgtttgctttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 49155347  T
Q  386 ttgata 391  Q
    ||||||    
T  49155346 ttgata 49155341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 21755551 - 21755449
Alignment:
Q  292 aaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||| | ||||| || ||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21755551 aaggtgtttgcattgactggtacgcagactaccaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 21755452  T
Q  392 ttg 394  Q
    |||    
T  21755451 ttg 21755449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 289 - 391
Target Start/End: Original strand, 40924924 - 40925026
Alignment:
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 388  Q
    |||||||||||||| ||| | ||||| || ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40924924 ggaaaggtgtttgctttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 40925023  T
Q  389 ata 391  Q
    |||    
T  40925024 ata 40925026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 95 - 391
Target Start/End: Complemental strand, 15627859 - 15627563
Alignment:
Q  95 ttgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagc 194  Q
    ||||||||||||| ||||||||||| |||||||||||||| |  || | |   |||| |||| |||| ||||| ||||| |||||||||||||| ||  |    
T  15627859 ttgtttgctacaactgtggtgagaaaggccacaagagtaacgcttgtacttgggatgtgaaacagtgtttccattgtggtaagaaagggcatactattac 15627760  T
Q  195 ggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaag 294  Q
     ||||||||||  | |||| | || || ||||| ||  | ||||| |||||| || |||||||||| | | | |||||||||||||| ||  |||| ||     
T  15627759 agaatgcaagcatgatgatgtggtgtgtttcaactgcaatgaagagggtcatattggttcgcagtgaaagtagcctaagaaggctcaaactagtgggaaa 15627660  T
Q  295 gtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||| ||| | ||||| || ||||| |||||||||||  | || | |||||| || |||||| ||||||||||||||||| ||||||||||||    
T  15627659 gtgtttgctttgactggtacgcaaacagtgaatgaggaccggttgattataggtacatgcttctttgatagtactcctttaattactattattgata 15627563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 12459734 - 12459662
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattgatg 397  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  12459734 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactgatg 12459662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 13024751 - 13024385
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||||||||| || ||   ||||||||| ||||| || ||||| |||||||  ||| |||| |||||||| |||||||||||||| || |||    
T  13024751 tcctgctgacaaagggaagcagaggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgtttgttacaagtgtggtgaaaaaggc 13024652  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    ||||| || ||||  |    |    ||||||  || || |||   |||||  ||||||| || ||  |||| ||||| ||||| || || ||||| ||||    
T  13024651 cacaaaagcaatgcttatggtagatatgagaggaaatgtttcaggtgtggttagaaaggacacaccctagctgaatgtaagcgtggagacattgtctgct 13024552  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||| ||  |||||||||||||| | ||||| ||||| |   | || |||||||||  ||| ||||| || |||||||||||| | ||||| || ||       
T  13024551 acaactgcaacgaagaaggtcatatcagttctcagtgtactcagccgaagaaggctaggaccggtgggaaagtgtttgcattgactggtacgcagactac 13024452  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  13024451 aaatgaggaccgacttatcagaggtacttgtttctttaatag-actcctttaattgctattatagata 13024385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 11385533 - 11385633
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||| ||||||||||| ||| | ||||| || ||   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11385533 ggtgggaaggtgtttgctttgactggtacgcagactactaatgaggacagacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 11385632  T
Q  386 t 386  Q
    |    
T  11385633 t 11385633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 18051057 - 18051157
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||| || ||||| ||| | |||||||| || | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  18051057 ggtggaaaagtttttgctttgactggtacacagactgctaatgaggaccgtctcatcagaggtacttgtttctttaatagtactcctttaattgctatta 18051156  T
Q  386 t 386  Q
    |    
T  18051157 t 18051157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 16947614 - 16947681
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16947614 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcatttaattgctattatagata 16947681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 13676858 - 13676745
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| || | ||||||||| ||||| || ||||| |||||||  |||  ||||||||||||||||||||||||| |||| |||    
T  13676858 tcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtaagaaaggc 13676759  T
Q  124 cacaagagtaatgt 137  Q
    ||||||||||||||    
T  13676758 cacaagagtaatgt 13676745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 13676555 - 13676496
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13676555 tgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 13676496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 287 - 386
Target Start/End: Complemental strand, 15343575 - 15343476
Alignment:
Q  287 gtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||| |||||||| ||| | ||||| || ||   |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15343575 gtggaaaagtgtttgctttgactggtacgcagactactaatgaggacaggcttatcagaggtacttgtttctttaatagtactcctttaattgctattat 15343476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 14140786 - 14140724
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14140786 taatgaggaaagacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 14140724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 14283516 - 14283578
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14283516 taatgaggactgtcttatcagaggtacttgtttctttaatagtactcctttcattgctattat 14283578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 26091670 - 26091753
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  |||  |||||||||||||||||||||||||||||| |||||||||||||||||    
T  26091670 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 26091753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 40924689 - 40924772
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  |||  |||||||||||||||||||||||||||||| |||||||||||||||||    
T  40924689 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 40924772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 49155671 - 49155595
Alignment:
Q  61 aggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||| || ||||| |||||||  |||  |||||||||||||||||||||||||||||| |||||||||||||||||    
T  49155671 aggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 49155595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 12460008 - 12459923
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||||| ||||| || ||||| |||||||| ||| |||||||||| || |||||||||||||| || ||||||||||| ||||    
T  12460008 gaatgatgataggaggcccaagaggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatg 12459923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 21755833 - 21755706
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagt 109  Q
    ||||| |||| || ||||||||||||||| || || | |  || |||||| | ||| |||||||| |||||||  ||  ||||||||||||| |||||||    
T  21755833 aagccttacagtgctcctgctgacaaaggaaagcagaatatgagtgatgacatgaggcctaagaggagagatgctccctctgagattgtttgttacaagt 21755734  T
Q  110 gtggtgagaagggccacaagagtaatgt 137  Q
    ||||||| || ||||||||||| |||||    
T  21755733 gtggtgaaaaaggccacaagagcaatgt 21755706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 302
Target Start/End: Complemental strand, 15114422 - 15114330
Alignment:
Q  210 tgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||||| |||||||  || ||| | |||||||||||| ||||||||||||||| ||| ||||||||||| || || ||||| ||||| |||||    
T  15114422 tgatatggtttgctataactgtaaggaagaaggtcatattagttcgcagtgcaagaagcctaagaaggcccaaactggtgggaaggtttttgc 15114330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 14283268 - 14283329
Alignment:
Q  76 agagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||||  ||| ||||| ||||||| ||||||||||| ||||| |||||||||||||||||    
T  14283268 agagatgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgt 14283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 17703593 - 17703686
Alignment:
Q  298 tttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||| ||||| ||||| || ||||  |||||||| ||  | ||||||||||||||||   |||||| |||||||||| |||||||||||||||    
T  17703593 tttgctttggctggtactcagacagagaatgaggatcgtttgatcagaggtacttgttatattaataatactcctttagttgctattattgata 17703686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 366
Target Start/End: Original strand, 12712816 - 12712847
Alignment:
Q  335 gacttatcagaggtacttgtttctttaatagt 366  Q
    ||||||||||||||||||||||||||||||||    
T  12712816 gacttatcagaggtacttgtttctttaatagt 12712847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 16947384 - 16947426
Alignment:
Q  94 attgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    |||||||| |||||||||||||| || ||||||||||||||||    
T  16947384 attgtttgttacaagtgtggtgaaaaaggccacaagagtaatg 16947426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 16726579 - 16726672
Alignment:
Q  298 tttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||| ||||| ||||| || ||||  |||||||| ||  | |||||||||||||| |   |||||| |||||||||| |||||||||||||||    
T  16726579 tttgctttggctggtactcagacagagaatgaggatcgtttgatcagaggtacttgatatattaataatactcctttagttgctattattgata 16726672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 80 - 386
Target Start/End: Complemental strand, 12218 - 11912
Alignment:
Q  80 atgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaa 179  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||| | ||||||||||||    
T  12218 atgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgcttgcaatggtgatgagaaaaagtgctttcgatgtgggaagaa 12119  T
Q  180 agggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggct 279  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12118 agggcatacgatagcggaatgcaagcgtggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaagcctaagaaggct 12019  T
Q  280 cagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattg 379  Q
    ||||||||||||||||||||||||||| | ||||| || ||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  12018 cagacaggtggaaaggtgtttgcattgactggtacgcagacaattaatgaggaccgacttattagagatacttgtttctttaatagtactcctttaattg 11919  T
Q  380 ctattat 386  Q
    |||||||    
T  11918 ctattat 11912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 244; Significance: 1e-135; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 8 - 391
Target Start/End: Original strand, 200319 - 200693
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||| ||| || || |||||||||||||||  |||| | ||||||||| |||||||||||||||||||| || |||| ||||||||||||||||||    
T  200319 cgaagcccgacattgctcttgctgacaaagggaagtaaagattgaatgatgagaggagacctaagagaagagaagttcctaatgagattgtttgctacaa 200418  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  200419 gtgtggtgagaagggccacaagagtaatgtttgcaatggtgatgagaagaagtgcttccgatgtgggaagaaagggcatacgatagcggaatgcaagcgt 200518  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattgg 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||| ||||||||||||         ||     
T  200519 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaagaagcctaagagggttcaggcaggtggaaagg---------tga 200609  T
Q  308 caggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    | ||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  200610 ctggtacgcagacggttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 200693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 51 - 386
Target Start/End: Complemental strand, 326125 - 325791
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || || || |||||||  ||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||||  ||   |||    
T  326125 gaatgatgagaggaggcc-aataggagagatgctcctgctgagattgtttgctacaagtgtggcgagaaagaccacaagagtaatgtctgtgataaagat 326027  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||||||| | |||||  ||||||| || ||  ||||  | || ||||| || ||| ||||||| |  || ||  | ||||| || ||| | |    
T  326026 gagaagaagtgcttcaagtgtggtcagaaaggacacacattagctaattgtaagcggggagatgttgtttgttataactgcaatgaagagggccatatca 325927  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||| |||||||   | || ||||||| |   || ||||| || |||||||| ||| | ||||| || ||   || |||||| |||||||||||||||||    
T  325926 gttcacagtgcacacaaccaaagaaggttagaaccggtggtaaagtgtttgctttgactggtacgcaaaccactagtgaggatcgacttatcagaggtac 325827  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||| |||||||||||||||||||||    
T  325826 ttgtttctttaatattactcctttaattgctattat 325791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 165
Target Start/End: Complemental strand, 319662 - 319548
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || || || |||||||  ||| ||| ||||||||||||||||||||| ||||| ||||||||||||||||||||  ||   |||    
T  319662 gaatgatgagaggaggcccaataggagagatgctcctgctgggattgtttgctacaagtgtggcgagaaaggccacaagagtaatgtctgtgataaagat 319563  T
Q  151 gagaaaaagtgcttc 165  Q
    ||||| |||||||||    
T  319562 gagaagaagtgcttc 319548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 10 - 386
Target Start/End: Complemental strand, 15230663 - 15230287
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagt 109  Q
    |||||||| | || |||||||||||||||||| ||||| |  |||||||| ||||| |||||||||| |||||| ||| |||||||||||||||||||||    
T  15230663 aagccctatagtgctcctgctgacaaagggaagcaaagattaaatgatgagaggaggcctaagagaaaagatgttcctgctgagattgtttgctacaagt 15230564  T
Q  110 gtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcgg 209  Q
    ||||||| |||||||||||||||||||| || |||| ||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||| ||    
T  15230563 gtggtgaaaagggccacaagagtaatgtttgtaatggtgatgagaaaaagtgtttctgatgtgggaagaaagggcatacgatagctgaatgcaagcgtgg 15230464  T
Q  210 tgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggca 309  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |     
T  15230463 tgatattgtttgcttcaattgtgatgaagaaggtcatcttagctcgcaatgcaggaagcctaagaaggatcagacaggtggaaaggtgtttgcattgacc 15230364  T
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||  || |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15230363 ggtacacggacggttaatgaggattgacttatcataggtacttgtttctttaatagtactcctttaattgctattat 15230287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 10 - 386
Target Start/End: Complemental strand, 15236531 - 15236155
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagt 109  Q
    |||||||| | || |||||||||||||||||| ||||| |  |||||||| ||||| |||||||||| |||||| ||| |||||||||||||||||||||    
T  15236531 aagccctatagtgctcctgctgacaaagggaagcaaagattaaatgatgagaggaggcctaagagaaaagatgttcctgctgagattgtttgctacaagt 15236432  T
Q  110 gtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcgg 209  Q
    ||||||| |||||||||||||||||||| || |||| ||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||| ||    
T  15236431 gtggtgaaaagggccacaagagtaatgtttgtaatggtgatgagaaaaagtgtttctgatgtgggaagaaagggcatacgatagctgaatgcaagcgtgg 15236332  T
Q  210 tgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggca 309  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |     
T  15236331 tgatattgtttgcttcaattgtgatgaagaaggtcatcttagctcgcaatgcaggaagcctaagaaggatcagacaggtggaaaggtgtttgcattgacc 15236232  T
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||  || |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15236231 ggtacacggacggttaatgaggattgacttatcataggtacttgtttctttaatagtactcctttaattgctattat 15236155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 24 - 391
Target Start/End: Original strand, 12857579 - 12857945
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| |||||| |   ||||||||| ||||| ||||| || |||||||  |||||||||||||| || | |||||||||||| ||||||    
T  12857579 tcctgctgacaaaggtaaacaaggactgaatgatgagaggaggcctaaaaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaagggc 12857678  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||| ||||||||| ||  |   ||||||||| ||||| |||| |||||| |||||||| || |  ||||| || ||||||||  |||||||||||||||    
T  12857679 cacatgagtaatgtatgtgactgtgatgagaagaagtgtttccgatgtggaaagaaaggacacataatagctgagtgcaagcgtcgtgatattgtttgct 12857778  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||||||||| |||||||||||| |||| ||| |||||||||| ||||||||||||| ||||||||| ||||||||||| ||| | ||||| || || ||    
T  12857779 acaattgtgatgaagaaggtcatattagctcgtagtgcaggaagcctaagaaggctctgacaggtggcaaggtgtttgctttgactggtacgcaaactgt 12857878  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12857879 taatgagga-cgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 12857945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 54 - 349
Target Start/End: Original strand, 2037025 - 2037320
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| |||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||    
T  2037025 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggag 2037124  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||    
T  2037125 aagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagtt 2037224  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggta 349  Q
    ||||||||| ||| |||||||||| |||| |  ||||||  |||||||| || || ||||| || ||||  |||||||| || || ||| ||||||    
T  2037225 cgcagtgcaagaagcctaagaagggtcaggcgagtggaagagtgtttgctttagctggtactcagacagcgaatgaggatcgtctgatctgaggta 2037320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 54 - 349
Target Start/End: Original strand, 2040766 - 2041061
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| |||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||    
T  2040766 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggag 2040865  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||    
T  2040866 aagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagtt 2040965  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggta 349  Q
    ||||||||| ||| |||||||||| |||| |  ||||||  |||||||| || || ||||| || ||||  |||||||| || || ||| ||||||    
T  2040966 cgcagtgcaagaagcctaagaagggtcaggcgagtggaagagtgtttgctttagctggtactcagacagcgaatgaggatcgtctgatctgaggta 2041061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 54 - 349
Target Start/End: Complemental strand, 14039762 - 14039467
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| |||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||    
T  14039762 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgaggag 14039663  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    || |||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||    
T  14039662 aagaagtgcttccgatgtgggaagaaagggcatacaatagctgaatgcaagcgtggtgatattgtttgtttcaattgtgatgaggaaggtcatcttagtt 14039563  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggta 349  Q
    ||||||||| ||| |||||||||| |||| |  ||||||  |||||||| || || ||||| || ||||  |||||||| || || ||| ||||||    
T  14039562 cgcagtgcaagaagcctaagaagggtcaggcgagtggaagagtgtttgctttagctggtactcagacagcgaatgaggatcgtctgatctgaggta 14039467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 302
Target Start/End: Original strand, 15008651 - 15008942
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || || || |||||||||  | ||||| | ||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||    
T  15008651 cgaagccctacagtgctcatgttgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgctacaa 15008750  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||||||||  ||||||||||||||||| ||||||| ||| |||||   |||||||| |||||| ||||| |||||||||||||| |||||||||||     
T  15008751 gtgtggtgagagaggccacaagagtaatgtttgcaatggtgaggagaa---gtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgt 15008847  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||  || |||||| |||||||||    
T  15008848 ggtgatattgtttgtttcaaatgtgatgaagaaggccatcttagttcgcagtgcaagaatcctaagaaggctcaagcaagtggaagggtgtttgc 15008942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 24 - 386
Target Start/End: Original strand, 14290615 - 14290977
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| ||   ||||||||| ||||| |||||||| |||||||  |||||||||||| |||||| ||||||||||||||| |||    
T  14290615 tcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaaggc 14290714  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| ||  ||   |||||||| ||||||||    |||||  ||||||| || ||  |||| || || ||||| || ||| || ||||||    
T  14290715 cacaagagtaatgtgtgtgattgagatgagaagaagtgctttaggtgtggacagaaaggacacactttagctgattgtaagcgtggggatgttatttgct 14290814  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      |||||||| ||||| || ||| |||| |||||||||| ||| |||||||||| || ||||||||| ||||||||||| ||| | ||||| || || ||    
T  14290815 ataattgtgatgaagagggacatattagctcgcagtgcaagaagcctaagaaggttcggacaggtggcaaggtgtttgctttgactggtacgcaaaccgt 14290914  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14290915 gaatgaggaccgacttatcagaggtacttgtttctttaatagtactcatttaattgctattat 14290977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 35983227 - 35982860
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| ||   ||||||||| ||||| |||||||| |||||||  ||||||| |||| |||||| ||||||||||||||| |||    
T  35983227 tcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgtgattatttgcttcaagtgtggtgagaaaggc 35983128  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| ||  |    |||||||| ||||| |||  ||||||  ||||||| || ||  | || || |||||||| || |||||||||||||    
T  35983127 cacaagagtaatgtgtgtgaccgagatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtggggatattgtttgct 35983028  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||| ||| | || ||||| ||| |||||||||| || | | | |||||||||| |  ||||||||| ||||||||||| ||| | | ||| || || ||    
T  35983027 acaactgtaatgaggaaggacatattagttcgcattgtacgcagcctaagaaggttaggacaggtggcaaggtgtttgctttgactgttacgcaaacggt 35982928  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||    
T  35982927 gaatgaggaccgacttatcagagatacttgtttctttaatagtactcttttaattgctattatagata 35982860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 55 - 391
Target Start/End: Original strand, 16825393 - 16825731
Alignment:
Q  55 gatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgaga 154  Q
    ||||| ||||| || ||||  |||||||  |||||||| |||||||| | |||||||||||| || ||||||||||||||||| ||  |   ||||||||    
T  16825393 gatgagaggaggcccaagatgagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgtgatgaga 16825492  T
Q  155 aaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttc 254  Q
    | |||||||||   ||||| || ||||| || ||  |||| || || ||||| || || |||||||||| ||| |   | || ||||||||| | ||||     
T  16825493 agaagtgcttcaggtgtggtaaaaaaggacacactttagctgattgtaagcgtggggacattgtttgctacaacttcaatgaggaaggtcatatcagttt 16825592  T
Q  255 gcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgt 354  Q
    |||||| | | | |||||||||| |  ||||||||| ||||||||||| ||| | ||||| || || || ||||||||| ||||||||||||||||||||    
T  16825593 gcagtgtacgcagcctaagaaggttaggacaggtggcaaggtgtttgctttgactggtacgcaaacggtgaatgaggactgacttatcagaggtacttgt 16825692  T
Q  355 ttcttta--atagtactcctttaattgctattattgata 391  Q
    |||||||  ||||||||||||||||||||||||| ||||    
T  16825693 ttctttaatatagtactcctttaattgctattatagata 16825731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 109 - 302
Target Start/End: Original strand, 13028524 - 13028717
Alignment:
Q  109 tgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcg 208  Q
    ||||| ||||| ||||||||||||||||| ||||||| |||  |||| |||||||||| |||||  ||||| |||||||||||||||||||| || |  |    
T  13028524 tgtggagagaaaggccacaagagtaatgtttgcaatggtgaaaagaagaagtgcttccgatgtgccaagaaggggcatacgatagcggaatgtaaccatg 13028623  T
Q  209 gtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
      |||||||| || ||||| ||  | || ||||| ||| ||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  13028624 aggatattgtgtgtttcaactgcaaagaggaaggacatattagttcgcagtgcaagaagcctaagaaggctcaggcaggtggaaaggtgtttgc 13028717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 54 - 391
Target Start/End: Complemental strand, 28757335 - 28756998
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| ||||| || ||||| |||||||  |||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||       |||||     
T  28757335 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 28757236  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    |  |||||||||   |||||  |||| || || |   |||| ||||||||||| || || ||||| || | ||||||  | | |||||||||| ||||||    
T  28757235 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaatggagaaggtcatattagtt 28757136  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttg 353  Q
    | |||||     | || |||||| ||   |  || |||||||||||||| ||| | ||||| || ||   ||||||||||||||||||||||||||||||    
T  28757135 cacagtgtcctgagccgaagaagactagaattgggggaaaggtgtttgctttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttg 28757036  T
Q  354 tttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28757035 tttctttaatagtactcctttaattgctattattgata 28756998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 12357637 - 12357972
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || ||||| ||||||   ||| ||||||||||||||||||||||||| || || ||||||||||||||||||||  ||   |||    
T  12357637 gaatgatgagaggaggcccaagaggagagatactcctgctgagattgtttgctacaagtgtggcgaaaaaggccacaagagtaatgtctgtgataaagat 12357736  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||||||||   |||||  ||||||| || ||  |||| || || ||||| || ||  |||||||||  || ||  | || ||||||||| | |    
T  12357737 gagaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcggggagacgttgtttgctataactgcaatgaggaaggtcatatca 12357836  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||||||||| |   | || ||||||| |  ||| ||||| || ||||||||  || | ||||| || ||   || |||||| |||||||||||||||||    
T  12357837 gttcgcagtgtacacaaccgaagaaggttaggaccggtggtaaagtgtttgctctgactggtacgcaaaccactagtgaggatcgacttatcagaggtac 12357936  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||||||| |||||||||||||||||    
T  12357937 ttgtttctttaatagtacacctttaattgctattat 12357972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 24 - 386
Target Start/End: Original strand, 11958264 - 11958626
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||||||||| ||   ||||||||| ||||| | |||||| |||||||  ||| |||| |||||||| || ||||||||||| || |||    
T  11958264 tcctgctgacaaagggaaacagagaatgaatgatgataggaggcttaagaggagagatgctcctgctgaaattgtttgttataagtgtggtgaaaaaggc 11958363  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    ||||| || ||||  ||   |   |||||||  ||||| |||   |||||  ||||||| |||||  |||| ||||| ||||| |  || ||||| ||||    
T  11958364 cacaaaagcaatgcttgtggtagagatgagaggaagtgtttcaggtgtggtcagaaaggacatacactagctgaatgtaagcgtgaggacattgtctgct 11958463  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||| ||  |||||||| ||||| | |||||  |||| |   | || |||||||||  ||| ||||| || |||||||||||| | ||||| || ||       
T  11958464 acaactgcaacgaagaaagtcatatcagttcatagtgtactcagccgaagaaggctaggaccggtgggaaagtgtttgcattgactggtacgcagactac 11958563  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11958564 caatgaggaccgacttatcagaggtacttgtttctttaatagtaatcctttaattgctattat 11958626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 24 - 397
Target Start/End: Complemental strand, 31941949 - 31941576
Alignment:
Q  24 tcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaaggg 122  Q
    |||||||||||||||||| || ||||| ||||||||| ||||| || || || ||| |||  ||| ||||||| ||||| ||||||||||| ||||| ||    
T  31941949 tcctgctgacaaagggaagcagaagtt-gaatgatgagaggaggcccaataggagaaatgctcctgctgagatcgtttgttacaagtgtggcgagaaagg 31941851  T
Q  123 ccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgc 222  Q
    ||||||||||||||| || |     |||||||| ||||| |||   |||||  |||| || || ||  |||| || |||||||| |||||| |||||||     
T  31941850 ccacaagagtaatgtttgtaccaaagatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgactgcaagcgtggtgatgttgtttgt 31941751  T
Q  223 ttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacag 322  Q
    |  |||||  | || || || ||| | |||||  |||| | | | || ||||||| |  ||| ||||| ||||||||||| ||| | ||||| || ||      
T  31941750 tataattgcaatgaggagggccatatcagttcatagtgtacgcagccgaagaaggttaggactggtggtaaggtgtttgctttgactggtacgcaaacca 31941651  T
Q  323 ttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattgatg 397  Q
     || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  31941650 ctagtgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatactgatg 31941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 10408752 - 10408647
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||||||||| ||| | ||||| || ||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10408752 ggtggaaaggtgtttgctttgactggtacgcagactcctaatgaggaccaacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 10408653  T
Q  386 ttgata 391  Q
    ||||||    
T  10408652 ttgata 10408647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 95 - 386
Target Start/End: Original strand, 10417199 - 10417490
Alignment:
Q  95 ttgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagc 194  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||  |||| |   |||||||| || || |||  ||| ||  ||||||| |||  | | ||    
T  10417199 ttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggc 10417298  T
Q  195 ggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcaga-caggtggaaa 293  Q
    ||| |||||||| || ||||||||||| || || ||||  || || |||||  ||||||||||||||  | | |||||||||| ||||| | || |||||    
T  10417299 ggattgcaagcgtggagatattgtttgttttaactgtggtgatgagggtcacattagttcgcagtgcccgcaacctaagaagg-tcagaactggaggaaa 10417397  T
Q  294 ggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
     || ||||| ||| | ||||| || ||    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10417398 agtatttgctttgactggtacgcagactaccaatgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 10417490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 12509867 - 12509933
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12509867 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 12509933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 52 - 386
Target Start/End: Complemental strand, 17494664 - 17494331
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| ||||| || ||||| |||||||  | ||||||||||||||||| ||| |||||||| || ||||||||||||||||| ||  ||   ||||    
T  17494664 aatgatgagaggaggcccaagaggagagatgctcatactgagattgtttgcttcaaatgtggtgaaaaaggccacaagagtaatgtttgtgatagagatg 17494565  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| ||||||| |   |||||  ||||||| || ||  |||| || || ||| | || || ||||||||||  || ||  |||| ||||||||| ||||    
T  17494564 agaagaagtgct-caggtgtggtcagaaaggacacacactagctgactgtaagtgtggagacattgtttgctataactgcaacgaggaaggtcatattag 17494466  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    ||||||||| |   | || ||||||| |  ||| ||||| || ||||||||  || | ||||| || ||  ||| |||||||   |||||||||||||||    
T  17494465 ttcgcagtgtactcaaccgaagaaggttaggaccggtggtaaagtgtttgctctgactggtacgcaaaccattagtgaggacatgcttatcagaggtact 17494366  T
Q  352 tgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||||||||||||||||||||||||    
T  17494365 tgtttctttaatagtactcctttaattgctattat 17494331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 16327054 - 16327159
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||||||||||||| | ||||| || ||    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16327054 ggtggaaaggtgtttgcattgactggtacgcagactaccaatgaggaccgacttattagaggtacttgtttctttaatagtactcctttaattgctatta 16327153  T
Q  386 ttgata 391  Q
    | ||||    
T  16327154 tagata 16327159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 47126728 - 47126623
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||| ||||||||||| ||| | ||||| || ||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47126728 ggtggtaaggtgtttgctttgactggtacgcagactcctaacgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 47126629  T
Q  386 ttgata 391  Q
    ||||||    
T  47126628 ttgata 47126623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 16831873 - 16831973
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||||||||| ||| | ||||| || ||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16831873 ggtggaaaggtgtttgctttgactggtacgcagactactaatgaggaccgtcttatcagaggtacttgtttctttaatagtactcctttaattgctatta 16831972  T
Q  386 t 386  Q
    |    
T  16831973 t 16831973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 24 - 394
Target Start/End: Original strand, 31692268 - 31692638
Alignment:
Q  24 tcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaaggg 122  Q
    |||||||||||||||||| || ||||| ||||||||| ||||| || || || ||| |||   || ||||||| ||||| ||||||||||||||||| ||    
T  31692268 tcctgctgacaaagggaagcagaagtt-gaatgatgagaggaggcccaataggagaaatgcttctgctgagatcgtttgttacaagtgtggtgagaaagg 31692366  T
Q  123 ccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgc 222  Q
    ||||||||||||||| || |     |||||||| ||||| |||   |||||  |||| || || ||  |||| || |||||| | |||||| |||||||     
T  31692367 ccacaagagtaatgtttgtaccaaagatgagaagaagtgtttcaggtgtggttagaagggacacactctagctgactgcaagagtggtgatgttgtttgt 31692466  T
Q  223 ttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacag 322  Q
    |  || ||  | || || || ||| | ||||| ||||| | | | || ||||||| |  ||| ||||| |||||||||||  || | ||||| || ||      
T  31692467 tataactgcaatgaggagggccatatcagttcacagtgtacgcagccgaagaaggttaggactggtggtaaggtgtttgctctgactggtacgcaaacca 31692566  T
Q  323 ttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
     || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31692567 ctagtgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagatattg 31692638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 386
Target Start/End: Complemental strand, 12181362 - 12181028
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| |||||  | ||||| |||||||  |||||||| ||| |||||| |||||||||||| || |||||||||||||| |||||  ||   ||||    
T  12181362 aatgatgagaggaggaccaagaggagagatgctcctactgacattttttgcttcaagtgtggtgaaaaaggccacaagagtaaagtctgtgatagagatg 12181263  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| |||||||||   |||||   |||||| || ||  |||| || || ||||  || || |||||||| |  |||||  || | ||||||||| | ||    
T  12181262 agaagaagtgcttcagttgtggtcggaaaggacacacactagctgattgtaagcttggggacattgtttgttataattgcaacaaggaaggtcatatcag 12181163  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    |||| |||| | | | || ||||||| |  ||| ||||| || |||||||| ||| | |||||  | ||   || |||||||||||||||||||||||||    
T  12181162 ttcgtagtgtacgcaaccgaagaaggttaggaccggtggtaaagtgtttgctttgactggtacgtaaaccactagtgaggaccgacttatcagaggtact 12181063  T
Q  352 tgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||||||||||||| ||||||||||    
T  12181062 tgtttctttaatagtactcctttagttgctattat 12181028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 8744735 - 8744835
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||| || ||||| ||| | |||||||| || | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  8744735 ggtggaaaagtttttgctttgactggtacacagactgctaatgaggaccgtctcatcagaggtacttgtttctttaatagtactcctttaattgctatta 8744834  T
Q  386 t 386  Q
    |    
T  8744835 t 8744835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 13317879 - 13317979
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||| |||||||| ||| | ||||| || ||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13317879 ggtggaaaagtgtttgctttgactggtacgcagactactaatgaggaccgtcttatcagaggtacttgtttctttaatagtactcctttaattgctatta 13317978  T
Q  386 t 386  Q
    |    
T  13317979 t 13317979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 386
Target Start/End: Complemental strand, 13944808 - 13944708
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||| || ||||| ||| | |||||||| || | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  13944808 ggtggaaaagtttttgctttgactggtacacagactgctaatgaggaccgtctcatcagaggtacttgtttctttaatagtactcctttaattgctatta 13944709  T
Q  386 t 386  Q
    |    
T  13944708 t 13944708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 18131733 - 18131792
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18131733 tgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 18131792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 17189120 - 17189058
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17189120 taatgaggacaggcttatcagaggtacttgtttctttaatagtactcctttaattgctattat 17189058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 11949311 - 11949370
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11949311 tgaggatcaacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 11949370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 16378317 - 16378376
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctat 383  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  16378317 taatgaggaccgtcttatcagaggtgcttgtttctttaatagtactcctttaattgctat 16378376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 24190046 - 24189988
Alignment:
Q  328 gaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24190046 gaggacaggcttatcagaggtacttgtttctttaatagtactcctttaattgctattat 24189988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 47126960 - 47126877
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  |||  |||||||||||||||||||||||||||||| |||||||||||||||||    
T  47126960 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 47126877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 18131430 - 18131543
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| ||   |||| |||| ||||| || ||||| |||||||  |||  |||||||| ||||||||||||||| ||||| |||    
T  18131430 tcctgctgacaaaggaaaacagagactgaataatgagaggaggcccaagaggagagatgctcctgttgagattgattgctacaagtgtggcgagaaaggc 18131529  T
Q  124 cacaagagtaatgt 137  Q
    ||||||||||||||    
T  18131530 cacaagagtaatgt 18131543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 391
Target Start/End: Original strand, 15013038 - 15013219
Alignment:
Q  210 tgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggca 309  Q
    |||||| |||||||| || ||||  ||||||||  || ||||  | ||||| | |||||||||||| | || | |  |||| ||||||||||| || ||     
T  15013038 tgatatagtttgctttaactgtggagaagaaggatatattagccctcagtgtaagaaccctaagaaagttccgtctagtgggaaggtgtttgctttagct 15013137  T
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||| || ||||  |||||||| || || ||||||||||| |||||| ||||||| |||||||||||| ||||||| ||||    
T  15013138 ggtactcagacagcgaatgaggatcgtctaatcagaggtacatgtttcattaatagcactcctttaattactattatagata 15013219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 2247148 - 2247215
Alignment:
Q  235 gaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||| ||||| ||||| ||||| |||||    
T  2247148 gaagaaggtcatattagttcgcagtgcaagaagcctaagaaggcccagactggtgggaaggtttttgc 2247215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 10408984 - 10408901
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  ||  ||||||||||||| ||||| ||||||||||| |||||||||||||||||    
T  10408984 tgatgataggaggcccaagaggagagatgctccagctgagattgtttgttacaaatgtggtgagaaaggccacaagagtaatgt 10408901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 13317636 - 13317770
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || ||||||||||||||| |||||||  |  |||||||| ||||| |||| | | |||||||  |||  |||  ||||||| |||||    
T  13317636 cgaagccctacagtgctcctgctgacaaaggaaaacaaatattaaatgatgagaggaggcctagggggagagatgctcctgttgatgttgtttgttacaa 13317735  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgca 142  Q
    ||||||||  || |||||||| |||||||| ||||    
T  13317736 gtgtggtgcaaaaggccacaaaagtaatgtttgca 13317770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 11861124 - 11861043
Alignment:
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||| ||||  |||||||| ||  | ||||||||||||||||   |||||| |||||||||| |||||||||||||||    
T  11861124 ggtacacagacagagaatgaggatcgcttgatcagaggtacttgttatattaataatactcctttagttgctattattgata 11861043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 19727810 - 19727686
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagt 109  Q
    ||||| |||| || ||||||||| || || |||||||| | ||||||||| ||||| ||||| |  | ||||||   | |||||||||||||||| |  |    
T  19727810 aagccttacagtgctcctgctgataagggcaaacaaagattgaatgatgagaggaggcctaaaaagaaagatgttgttgctgagattgtttgctatactt 19727711  T
Q  110 gtggtgagaagggccacaagagtaa 134  Q
    |||||||||| ||||| ||||||||    
T  19727710 gtggtgagaaaggccataagagtaa 19727686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 16326790 - 16326905
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagaga-tgtgcctactgaga-ttgtttgctacaagtgtggtgagaagg 121  Q
    ||||||||||||||| || ||||    ||||||||| |||||||| ||||| ||||| ||  ||| |||||| ||||||| || ||||||||||| || |    
T  16326790 tcctgctgacaaaggaaagcaaaaggtgaatgatgataggagacccaagaggagagactgctcctgctgagacttgtttgttataagtgtggtgaaaaag 16326889  T
Q  122 gccacaagagtaatgt 137  Q
    |||||||||| |||||    
T  16326890 gccacaagagcaatgt 16326905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 16831639 - 16831724
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||||| ||||| || || || |||||||  ||| ||||||| ||||| |  |||||||| ||||| |||||||||||||||||    
T  16831639 aatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgt 16831724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 10 - 389
Target Start/End: Original strand, 3736 - 4112
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagt 109  Q
    |||||||| | || |||||||||||| ||||||||||| | ||||||||| |||||||||||||| ||||||||  ||  ||||||||||||||||||||    
T  3736 aagccctatagtgctcctgctgacaaggggaaacaaagattgaatgatgagaggagacctaagaggagagatgtttctgttgagattgtttgctacaagt 3835  T
Q  110 gtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcgg 209  Q
    |||| |||| |||||||||||||||||||||||||| ||| ||||| |||||||||| |||||| ||||| |||||| ||||||| ||||||||||| ||    
T  3836 gtggcgagaggggccacaagagtaatgtctgcaatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatgcgatagctgaatgcaagcgtgg 3935  T
Q  210 tgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggca 309  Q
    ||||||||||| ||||||||||||  |||||||||||||||  ||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |     
T  3936 tgatattgtttacttcaattgtgataaagaaggtcatcttaactcgcaatgcatgaagcctaagaaggctcagacaggtggaaaggtgtttgcattgacc 4035  T
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattga 389  Q
    |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||    
T  4036 ggtacacagacggttaatgaggaccgacttataagaggtacttgtttctttaatagtactc---taattgctattattga 4112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 302
Target Start/End: Complemental strand, 28350939 - 28350645
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||| | || ||||| |||||||||| | ||||| | ||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||||    
T  28350939 cgaagccctatagtgctcctgttgacaaaggggagcaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgctacaa 28350840  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||     
T  28350839 gtgtggtgagaaaggccacaagagtaatgtttgcaatggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatacgatagctgaatgcaagcgt 28350740  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| || |||||| |||||||||    
T  28350739 ggtgatattgtttgcttcaattgtgacgaagaaggtcatctcagttcgcagtgcaagaagcctaagaaggctcaggcaagtggaagggtgtttgc 28350645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 21901601 - 21901366
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || ||||||||||||||||||||| || | ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  21901601 cgaagccctacagtgctcctgctgacaaagggaaacagagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaa 21901502  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||     
T  21901501 gtgtggtgagaagggccacaagagtaatgtttgcaatggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatacgatagctgaatgcaagcgt 21901402  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggt 243  Q
    ||||||||||||||||||||||||||||||||||||    
T  21901401 ggtgatattgtttgcttcaattgtgacgaagaaggt 21901366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 196 - 391
Target Start/End: Complemental strand, 23113598 - 23113404
Alignment:
Q  196 gaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaagg 295  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  23113598 gaatgcaagcgtggtgatattgtttgcttcaattgtgacgaataaggtcatcttagctcgcagtgcaggaagcctaagaaggctcagacaggtggaaagg 23113499  T
Q  296 tgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||| | || |||||  |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23113498 tgtttgcattgactggaacacaggcagttattgagga-cgacttatcaaaggtacttgtttctttaatagtactcctttaattgctattattgata 23113404  T

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Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 391
Target Start/End: Original strand, 19716439 - 19716779
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || || || |||||||  ||| ||||||| ||||| ||||||||||| ||||| ||||||||||||||||| || | |   |||    
T  19716439 gaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagat 19716538  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||| |||   |||||  ||||||| || ||  |||| || ||||||||  ||||| ||||||| |  || ||  || |||| || ||| | |    
T  19716539 gagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtagtgatgttgtttgttataactgcaacaaagagggccatatca 19716638  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    ||||||||||||   | || ||||||| |   || ||||| || |||||||||||| | ||||| || ||   || ||||||||||||||||| ||||||    
T  19716639 gttcgcagtgcacacagccgaagaaggttagaaccggtgggaaagtgtttgcattgactggtacgcagactactagtgaggaccgacttatcaaaggtac 19716738  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  19716739 ttgtttctttaatagtactcctttaattgctattatagata 19716779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 51 - 391
Target Start/End: Original strand, 19721002 - 19721342
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || || || |||||||  ||| ||||||| ||||| ||||||||||| ||||| ||||||||||||||||| || | |   |||    
T  19721002 gaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagat 19721101  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||| |||   |||||  ||||||| || ||  |||| || ||||||||  ||||| ||||||| |  || ||  || |||| || ||| | |    
T  19721102 gagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtagtgatgttgtttgttataactgcaacaaagagggccatatca 19721201  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    ||||||||||||   | || ||||||| |   || ||||| || |||||||||||| | ||||| || ||   || ||||||||||||||||| ||||||    
T  19721202 gttcgcagtgcacacagccgaagaaggttagaaccggtgggaaagtgtttgcattgactggtacgcagactactagtgaggaccgacttatcaaaggtac 19721301  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  19721302 ttgtttctttaatagtactcctttaattgctattatagata 19721342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 20848375 - 20848270
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||||||||| ||| | ||||| || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20848375 ggtggaaaggtgtttgctttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 20848276  T
Q  386 ttgata 391  Q
    | ||||    
T  20848275 tagata 20848270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 386
Target Start/End: Complemental strand, 23274613 - 23274279
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| ||||| || ||||| |||||||  |||||||| ||||||||| |||||||||||||||| ||||||||||||||||| || | |   ||||    
T  23274613 aatgatgagaggaggcccaagaggagagatgctcctactgaaattgtttgcaacaagtgtggtgagaaaggccacaagagtaatgtttgtactaaagatg 23274514  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| |||||||||   |||||  |||| || || ||  |||| || || ||||| || || || |||||||  || ||  | || || || ||| | ||    
T  23274513 agaagaagtgcttcaggtgtggacagaagggacacacattagctgattgtaagcggggagacatagtttgctataactgcaatgaggagggccatatcag 23274414  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    ||| |||||||   | || ||||||| |  ||| ||||| || ||||||||  || | ||||  || ||   || |||||| ||||||||||||||||||    
T  23274413 ttcacagtgcacacaaccgaagaaggttaggactggtggtaaagtgtttgctctgactggtatgcaaaccactagtgaggatcgacttatcagaggtact 23274314  T
Q  352 tgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||||||||||||||||||||||||    
T  23274313 tgtttctttaatagtactcctttaattgctattat 23274279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 386
Target Start/End: Complemental strand, 12577139 - 12577039
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||| || ||||| ||| | |||||||| || | |||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  12577139 ggtggaaaagtttttgctttgactggtacacagactgctaatgaggaccgcctcatcagaggtacttgtttctttaatagtattcctttaattgctatta 12577040  T
Q  386 t 386  Q
    |    
T  12577039 t 12577039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 23097675 - 23097775
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||| ||||||||||| ||| | ||||| || ||   |||||||||| | ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  23097675 ggtgggaaggtgtttgctttgactggtacgcagactactaatgaggacaggcttataagaggtacttgattctttaatagtactcctttaattgctatta 23097774  T
Q  386 t 386  Q
    |    
T  23097775 t 23097775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 24817297 - 24817347
Alignment:
Q  86 ctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  24817297 ctactgagattgtttgctatacttgtggtgagaagggccacaagagtaatg 24817347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 20848570 - 20848524
Alignment:
Q  90 tgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  20848570 tgagattgtt-gctacaagtgtggtgagaaaggccacaagagtaatgt 20848524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 22462943 - 22462989
Alignment:
Q  91 gagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||||| | ||| ||||||||||| |||||||||||||||||    
T  22462943 gagattgtttgtttcaactgtggtgagaaaggccacaagagtaatgt 22462989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 45673708 - 45673774
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||| ||| | |||||||||||||| |   |||||| |||||||||| |||||||||||||||    
T  45673708 aatgaggatcgattgatcagaggtacttgctatattaataatactcctttagttgctattattgata 45673774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 19817594 - 19817541
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaatt 378  Q
    |||||||| || || ||||||||||| |||||| ||||||||||||| ||||||    
T  19817594 aatgaggatcgtctgatcagaggtacatgtttcattaatagtactcccttaatt 19817541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 30208601 - 30208682
Alignment:
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||| || ||||| |||||||| |  || |||| |||||| |||||| ||||||||||||| |||||| ||||||| ||||    
T  30208601 ggtactcagacagtgaatgaggatcatctgatcaaaggtacatgtttcattaatagtactcccttaattactattatagata 30208682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 24 - 282
Target Start/End: Complemental strand, 8709094 - 8708836
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||||||||| ||||| | ||||||||| |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||    
T  8709094 tcctgctgacaaagggaagcaaagattgaatgatgagaggagacctaagagaatagatgttcctgctgagattgtttgctacaagtgtggtgagaagggc 8708995  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| ||||||| |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8708994 cacaagagtaatgtttgcaatggtgatgaaaagaagtgcttccgatgtgggaagaaagggcatacgatagcggaatgcaagcgtggtgatattgtttgct 8708895  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcag 282  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  8708894 tcaattgtgacgaagaaggccatcttagttcgcagtgcaagaagcctaagaaggctcag 8708836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 8 - 302
Target Start/End: Complemental strand, 13879542 - 13879248
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || ||||| |||||||||| | ||||| | ||||||||| |||||||||||||||||||||||  |||||||||||||||| |||||    
T  13879542 cgaagccctacagtgctcctgatgacaaagggtagcaaagattgaatgatgagaggagacctaagagaagagatgtttctactgagattgtttgttacaa 13879443  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||| |||||| ||||| || ||||||||||| |||||||||||     
T  13879442 gtgtggtgagaagggccacaagagtaatgtatgcaatgatgaggagaagaagtgcttccgatgtggaaagaagggccatacgatagctgaatgcaagcgt 13879343  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||| ||||||||| ||||  || |||||| |||||||||    
T  13879342 ggtcatattgtttgcttcaattgtgacgaagaaggtcatctcagttcacagtgtaagaagcctaagaagactcaagcaagtggaagggtgtttgc 13879248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 15073776 - 15073409
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||  ||||| ||   ||||||||| ||||| |||| ||| |||||||  |||||||||||||| || | |||||||||||| || |||    
T  15073776 tcctgctgacaaagttaaacagagactgaatgatgagaggaggcctaggaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaaaggc 15073677  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| ||  |   ||||||||| ||||| ||    ||||| |||||||| || ||  |||| || |||||||   ||||| |||||||||    
T  15073676 cacaagagtaatgtatgtgaccgtgatgagaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagctttgtgatgttgtttgct 15073577  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      |||||||| |||||||||||| | || || ||||||||||| ||||||||||||| ||||||||| ||||||||| | ||| | |||||||| || ||    
T  15073576 ataattgtgatgaagaaggtcatataagctcacagtgcaggaagcctaagaaggctctgacaggtggcaaggtgttttctttgactggtacacaaactgt 15073477  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  15073476 taatgaggaccgacttatcagaggtacttgtttctttaataatactcctttaattgctattatagata 15073409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 391
Target Start/End: Original strand, 14993223 - 14993589
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || || || || | ||||||||| ||||| || ||||| |||||||  |||||||| |||||||| | |||||||||||| || ||||    
T  14993223 cctgctgacaagggtaagcagagattgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggcc 14993322  T
Q  125 acaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgctt 224  Q
    ||||||||||||| ||  |   |||  |||| |||||||||   |||||  ||||||| || ||  |||| || |||||||  || ||| |||||||||     
T  14993323 acaagagtaatgtttgtgaccgtgagaagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgcaagcatggggatgttgtttgcta 14993422  T
Q  225 caattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtt 324  Q
    ||| ||  | || ||||||||| | ||||||||||| | | | |||||||||| |  ||||||||| ||||||||||| |||   ||||| || |||||     
T  14993423 caactgcaatgaggaaggtcatatcagttcgcagtgtacgcaacctaagaaggttaggacaggtggcaaggtgtttgctttgaatggtacgcaaacagtg 14993522  T
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14993523 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 14993589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 391
Target Start/End: Complemental strand, 16151026 - 16150686
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || ||||| |||||||  |||  ||| ||||||||||| |||||||| ||||| ||||||||||||||||| || | |   |||    
T  16151026 gaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaagat 16150927  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||||||||   |||||  ||||||| || ||  |||| || |||||||| |||||| |||||||||  || ||||| ||||| || ||| |||    
T  16150926 gagaagaagtgcttcaggtgtggtcagaaaggacacacactagctgattgcaagcgtggtgatgttgtttgctataactgtgatgaagaggggcatatta 16150827  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    | ||||| |||| ||| || ||||||| |   || ||||| || |||||||||||| | |||||  | ||   || |||||| |||||||||||| ||||    
T  16150826 gctcgcaatgcaagaaaccgaagaaggttagaaccggtgggaaagtgtttgcattgactggtacgtagaccactagtgaggatcgacttatcagatgtac 16150727  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  16150726 ttgtttctttaatagtactcctttagttgctattatagata 16150686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 391
Target Start/End: Complemental strand, 16155172 - 16154832
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || ||||| |||||||  |||  ||| ||||||||||| |||||||| ||||| ||||||||||||||||| || | |   |||    
T  16155172 gaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaagat 16155073  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||||||||   |||||  ||||||| || ||  |||| || |||||||| |||||| |||||||||  || ||||| ||||| || ||| |||    
T  16155072 gagaagaagtgcttcaggtgtggtcagaaaggacacacactagctgattgcaagcgtggtgatgttgtttgctataactgtgatgaagaggggcatatta 16154973  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    | ||||| |||| ||| || ||||||| |   || ||||| || |||||||||||| | |||||  | ||   || |||||| |||||||||||| ||||    
T  16154972 gctcgcaatgcaagaaaccgaagaaggttagaaccggtgggaaagtgtttgcattgactggtacgtagaccactagtgaggatcgacttatcagatgtac 16154873  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  16154872 ttgtttctttaatagtactcctttagttgctattatagata 16154832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 8 - 386
Target Start/End: Complemental strand, 27903818 - 27903440
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    ||||||||||||||| ||||||||||||||| |||||||| | ||||||||| ||| | |||| | | |||||||  |||  |||  ||||||| |||||    
T  27903818 cgaagccctacaatgttcctgctgacaaaggaaaacaaagattgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaa 27903719  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||||| ||| ||||||||||||||||||||||     |||||||| ||||| |||  ||||||  ||||||| |||  | | || |||||||||||     
T  27903718 gtgtggtgcgaaaggccacaagagtaatgtctgcaccaaagatgagaagaagtgtttcagatgtggtcagaaaggtcatgtgttggctgaatgcaagcgt 27903619  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcag-acaggtggaaaggtgtttgcattg 306  Q
    || ||||||||||| |  || ||| | || || ||  |  ||||||| ||||||| | | |||||||||| |||| ||  | ||||| || ||||| |||    
T  27903618 ggagatattgtttgttataactgtaatgaggagggcaacattagttcacagtgcacgcaacctaagaagg-tcagaacttgaggaaaagtatttgctttg 27903520  T
Q  307 gcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
     | ||||| || ||    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27903519 actggtacgcagactaccaatgaggatcgacttatcagaggtacatgtttctttaatagtactcctttaattgctattat 27903440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 51 - 391
Target Start/End: Complemental strand, 20893421 - 20893081
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||||||| |||||||  ||| ||||||||||||| |||||||||||||| || ||| ||||||| ||||| ||   |   |||    
T  20893421 gaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggcaacaagagcaatgtttgtggtagagat 20893322  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||  |||||||||   |||||  |||| || || |   |||| ||||||||||| || |||||||| | || ||| ||  | ||||| || ||| | |    
T  20893321 gagaggaagtgcttcaggtgtggtcagaagggacacaatttagctgaatgcaagcgtggggatattgtctactacaactgcaatgaagaggggcatatca 20893222  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||||||||| |   | || ||||||| |   || ||||||||||||||||| ||| | ||||| || ||    ||||||||||||||||||||||||||    
T  20893221 gttcgcagtgtactgagccgaagaaggttagaactggtggaaaggtgtttgctttgactggtacgcagactaccaatgaggaccgacttatcagaggtac 20893122  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  20893121 ttgtttctttaatagtactcctttaattgctattatagata 20893081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 3261911 - 3262016
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||||||||| ||| | ||||| || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3261911 ggtggaaaggtgtttgctttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 3262010  T
Q  386 ttgata 391  Q
    ||||||    
T  3262011 ttgata 3262016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 54 - 391
Target Start/End: Complemental strand, 7357654 - 7357317
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgag 153  Q
    |||||| ||||| || ||||| |||||||  ||| ||||||||||||| |||||| |||||||||| ||||||||||| ||||| |    |   ||||||    
T  7357654 tgatgataggaggcccaagaggagagatgctcctgctgagattgtttgttacaagagtggtgagaaaggccacaagagcaatgtttatggtaaagatgag 7357555  T
Q  154 aaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagtt 253  Q
    |  |||||||||   |||||  |||| || || |   |||| ||||||||||| || || ||||| |||| ||| ||  | | ||| |||||| ||||||    
T  7357554 aggaagtgcttcaggtgtggtcagaagggtcacaatttagctgaatgcaagcgtggagacattgtctgctacaactgcaatggagagggtcatattagtt 7357455  T
Q  254 cgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttg 353  Q
    | |||||     | || |||||||||   ||  |||| ||||||||||||||| | |||||||| ||    |||||||||||||||||||||||||||||    
T  7357454 cacagtgtcctgagccgaagaaggctagaactagtgggaaggtgtttgcattgactggtacacagactaccaatgaggaccgacttatcagaggtacttg 7357355  T
Q  354 tttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7357354 tttctttaatagtactcctttaattgctattattgata 7357317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 51 - 391
Target Start/End: Original strand, 11204114 - 11204454
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| |||||||| ||||| |||||||  ||| ||||||||||||| || |||||||||||||| ||||||||||| ||||| ||   |   |||    
T  11204114 gaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttataagtgtggtgagaaaggccacaagagcaatgtttgtggtagagat 11204213  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    || | ||| ||||||   |||||  |||| || || |   ||||  |||||||||| || |||||||| |||| ||||||  | | ||| |||||| | |    
T  11204214 gatagaaaatgcttcaggtgtggtcagaagggtcacagtctagcttaatgcaagcgtggggatattgtctgctacaattgcaatggagagggtcatatca 11204313  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||| |||||     | || || ||||||   || ||||| ||||||||||| ||| | ||||| || ||    ||||||||||||||||||||||||||    
T  11204314 gttcacagtgtcctgagccgaaaaaggctagaactggtgggaaggtgtttgctttgactggtacgcanactaccaatgaggaccgacttatcagaggtac 11204413  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11204414 ttgtttctttaatagtactcctttaattgctattattgata 11204454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 391
Target Start/End: Original strand, 44658753 - 44659088
Alignment:
Q  56 atgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaa 155  Q
    |||| ||||| || ||||| |||||||  |||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||       ||||| |     
T  44658753 atgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgatag 44658852  T
Q  156 aaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcg 255  Q
     |||||||||   |||||  |||| || || |   |||| ||||||||||| || |||||||| || | ||||||  | | |||| ||||| |||||||     
T  44658853 gaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggatattgtctgttacaattgcaatggagaatgtcatattagttca 44658952  T
Q  256 cagtg-caggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgt 354  Q
    ||||| |  |||||  |||||| ||   || ||||||||||||||||| |||   ||||| || ||   |||||||||||||||||||||||||||||||    
T  44658953 cagtgtcctgaaccg-aagaagactagaactggtggaaaggtgtttgctttgaatggtacgcagactcctaatgaggaccgacttatcagaggtacttgt 44659051  T
Q  355 ttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||| ||||    
T  44659052 ttctttaatagtactcctttaattgctattatagata 44659088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 289 - 391
Target Start/End: Original strand, 29450657 - 29450759
Alignment:
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 388  Q
    |||||||||||||| ||| | ||||| || ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29450657 ggaaaggtgtttgctttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 29450756  T
Q  389 ata 391  Q
    |||    
T  29450757 ata 29450759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 52 - 386
Target Start/End: Complemental strand, 15267165 - 15266831
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| ||||| || ||||| |||||||  |||||  | |||||||||| |||||||| |||||||||||| ||||||||||| ||  |    ||||    
T  15267165 aatgatgagaggaggcccaagaggagagatgctcctacgaatattgtttgcttcaagtgtgatgagaagggccataagagtaatgtttgtgacagagatg 15267066  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| |||||||||   |||||  ||||||| || ||  |||| || || ||||  || || ||||||||||  || ||  |||||||||||||| | ||    
T  15267065 agaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgtaagcatggagacattgtttgctataactgcaacgaagaaggtcatatcag 15266966  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    |||| |||| | | | || ||||||| |  ||| ||||| ||||||||||| ||  |  |||| || |||  || ||| ||| ||||||||||||||| |    
T  15266965 ttcgtagtgtacgcagccgaagaaggttaggaccggtggcaaggtgtttgctttaaccagtacgcaaacaactagtgaagacagacttatcagaggtagt 15266866  T
Q  352 tgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||||||||||||||||||||||||    
T  15266865 tgtttctttaatagtactcctttaattgctattat 15266831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 51603909 - 51604009
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||| || ||||| ||| | |||||||| || | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  51603909 ggtggaaaagtttttgctttgactggtacacagactgctaatgaggaccgtctcatcagaggtacttgtttctttaatagtactcctttaattgctatta 51604008  T
Q  386 t 386  Q
    |    
T  51604009 t 51604009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 53750587 - 53750687
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||| || ||||| ||| | |||||||| || | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  53750587 ggtggaaaagtttttgctttgactggtacacagactgctaatgaggaccgtctcatcagaggtacttgtttctttaatagtactcctttaattgctatta 53750686  T
Q  386 t 386  Q
    |    
T  53750687 t 53750687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 15354234 - 15354291
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatt 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15354234 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgatatt 15354291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 29450422 - 29450505
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| |||||||| |||||||  |||  |||||||||||||||||||||||||||||| |||||||||||||||||    
T  29450422 tgatgataggaggcctaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 29450505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 3261679 - 3261762
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  |||  |||||||||||||||||||||||||||||| |||||||||||||||||    
T  3261679 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 3261762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 391
Target Start/End: Complemental strand, 14697453 - 14697151
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatac 188  Q
    |||||||||||||||| |  ||||||||||| ||||| ||||||||||  ||   ||  |||  ||||  ||| ||||| || || ||||| ||||||||    
T  14697453 ctgagattgtttgctatacttgtggtgagaaaggccataagagtaatgcttgtcttggggatttgaaacggtgtttccattgcggtaagaaggggcatac 14697354  T
Q  189 gatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggt 288  Q
     || ||  |||| |||| || |||| |  | || ||||||||  | |||||||||||| || | || || |||| ||| ||||||||| |||||||  ||    
T  14697353 tattgcaaaatgtaagcacgatgatgtgctgtgtttcaattgcaatgaagaaggtcatattgggtcacaatgcaagaaacctaagaagactcagactagt 14697254  T
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 388  Q
    || |  |||||||| ||| | ||||| || ||||  |||||||| ||  | || | |||||| |||| |||| |||||||||||||||||||||||||||    
T  14697253 ggtagagtgtttgctttgactggtacgcaaacagagaatgaggatcgtttgattataggtacatgttactttgatagtactcctttaattgctattattg 14697154  T
Q  389 ata 391  Q
    |||    
T  14697153 ata 14697151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 16350423 - 16350516
Alignment:
Q  298 tttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||| ||||| |||||||| || |  |||||||| ||  | ||||||||||||||||   |||||| |||||||||| |||||||||||||||    
T  16350423 tttgctttggctggtacacagaccgagaatgaggatcgcttgatcagaggtacttgttatattaataatactcctttagttgctattattgata 16350516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 18259830 - 18259745
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||||| ||||| || ||||| | |||||  |||||| | ||||||||||  ||||||||||| || |||||||||||||||||    
T  18259830 aatgatgagaggaggcccaagaggacagatgctcctactaatattgtttgctttaagtgtggtgaaaaaggccacaagagtaatgt 18259745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 15946 - 15997
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  15946 atcagaggtacttgttattttgatagtacacctttagttgctattattgata 15997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 16219289 - 16219235
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    ||||||||||| ||||  ||| ||||||| |||||| ||||||||||||||||||    
T  16219289 atcagaggtacatgttattttgatagtacacctttagttgctattattgatattg 16219235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 16222609 - 16222555
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    ||||||||||| ||||  ||| ||||||| |||||| ||||||||||||||||||    
T  16222609 atcagaggtacatgttattttgatagtacacctttagttgctattattgatattg 16222555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 51 - 302
Target Start/End: Complemental strand, 1358 - 1107
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||     
T  1358 gaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttgcaatggtgag 1259  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||||||||| |||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |    
T  1258 gagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgtggtgatattgtttgcttcaattgtgacgaataaggtcatctca 1159  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||| ||||| | ||| ||||||||||||||| || |||||| |||||||||    
T  1158 gttcacagtgtaagaagcctaagaaggctcaggcaagtggaagggtgtttgc 1107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 8019 - 7904
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || ||||| |||||||||  | || || | ||||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||    
T  8019 cgaagccctacagtgctcctgttgacaaaggagagcagagattgaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaa 7920  T
Q  108 gtgtggtgagaagggc 123  Q
    ||||||||||||||||    
T  7919 gtgtggtgagaagggc 7904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 29973 - 29606
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| || || ||   ||||||||| ||||| |||| ||| |||||||  |||| |||||| || |  | |||||||||||| ||||||    
T  29973 tcctgctgacaaaggtaagcagagactgaatgatgagaggaggcctaggaggagagatgctcctattgagatagtctatttcaagtgtggtgaaaagggc 29874  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| || ||   ||||||||| ||||| ||||  ||||||| |||||| || || ||||| || |||||||| |||||| |||||||||    
T  29873 cacaagagtaatgtttgtaaccatgatgagaagaagtgtttccggtgtgggacgaaaggacacacaatagctgagtgcaagcgtggtgatgttgtttgct 29774  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||  || | ||||| || || ||    
T  29773 acaattgtgatgaagaaggtcatattagctcgcagtgcaggaagcctaagaaggctctgacaggtggcaaggtgtttgctctgactggtacgcaaactgt 29674  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29673 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 29606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 76 - 391
Target Start/End: Original strand, 3999 - 4314
Alignment:
Q  76 agagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtggga 175  Q
    |||||||  |||||||||||||| || | ||||| |||||| |||||  ||||||||||||| ||  |   ||||||||| | ||| ||||  |||||||    
T  3999 agagatgctcctactgagattgtctgtttcaagtttggtgaaaagggaaacaagagtaatgtatgtgaccgtgatgagaagatgtgtttcctgtgtggga 4098  T
Q  176 agaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaa 275  Q
    ||||| | || || ||||| || ||||| |  || || ||||| || ||||||||||| ||||||||||||||||| ||||| | |||||| ||||||||    
T  4099 agaaaagacacacaatagctgagtgcaaacatggagacattgtctgtttcaattgtgatgaagaaggtcatcttagctcgcaatccaggaagcctaagaa 4198  T
Q  276 ggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactccttta 375  Q
    |||||||||| |||||||||||||| ||||| | ||||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4199 ggctcagacaagtggaaaggtgttttcattgaccggtacatggacggttaatgaggaccgacttatcagaggtacttgtttctttaatagtactccttta 4298  T
Q  376 attgctattattgata 391  Q
    ||||||||||||||||    
T  4299 attgctattattgata 4314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 51 - 391
Target Start/End: Original strand, 1157 - 1497
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||| ||| |||||||  |||||| ||||||| || |  || |||||||| || ||||||||| ||||||| ||  |   ||||    
T  1157 gaatgatgagaggaggcctaggaggagagatgctcctactaagattgtctgttttaaatgtggtgaaaaaggccacaagggtaatgtatgtgaccgtgat 1256  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||| |||| ||||||||||||||| || ||  | || || || ||||| ||||||||||| |||| ||||||||| ||||| |||||| |||    
T  1257 gagaagaagtgtttccgatgtgggaagaaaggacacacattggctgagtgtaagcgtggtgatattgtgtgctacaattgtgatgaagagggtcatatta 1356  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    | || ||||||||||| ||||||||||||| ||||||||| ||||||||||| ||| | |||||  | ||   |||||||||||||||||||||||||||    
T  1357 gctctcagtgcaggaagcctaagaaggctctgacaggtggcaaggtgtttgctttgactggtacgaaaactactaatgaggaccgacttatcagaggtac 1456  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  1457 ttgtttctttaatagtactcctttaattgctattatagata 1497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 51 - 391
Target Start/End: Original strand, 28170 - 28510
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||| ||| |||||||  |||||| ||||||| || |  || |||||||| || ||||||||| ||||||| ||  |   ||||    
T  28170 gaatgatgagaggaggcctaggaggagagatgctcctactaagattgtctgttttaaatgtggtgaaaaaggccacaagggtaatgtatgtgaccgtgat 28269  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||| |||| ||||||||||||||| || ||  | || || || ||||| ||||||||||| |||| ||||||||| ||||| |||||| |||    
T  28270 gagaagaagtgtttccgatgtgggaagaaaggacacacattggctgagtgtaagcgtggtgatattgtgtgctacaattgtgatgaagagggtcatatta 28369  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    | || ||||||||||| ||||||||||||| ||||||||| ||||||||||| ||| | |||||  | ||   |||||||||||||||||||||||||||    
T  28370 gctctcagtgcaggaagcctaagaaggctctgacaggtggcaaggtgtttgctttgactggtacgaaaactactaatgaggaccgacttatcagaggtac 28469  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  28470 ttgtttctttaatagtactcctttaattgctattatagata 28510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 51 - 391
Target Start/End: Original strand, 43304 - 43644
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||||||| |||||||  |||| ||||||||| || | ||||||| |||| |||||||||||||||||||| ||  ||   |||    
T  43304 gaatgatgagaggaggcctaagaggagagatgctcctaatgagattgtctgtttcaagtgtcgtgaaaagggccacaagagtaatgtgtgtgatcgagat 43403  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||||||    |||||  ||||||| || ||  |||| || || ||||| || ||| |||||||||  |||||||| ||||| |||||| |||    
T  43404 gagaagaagtgctttaggtgtggacagaaaggacacactttagctgattgtaagcgtggggatgttgtttgctataattgtgatgaagagggtcatatta 43503  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    | |||||||||| ||| || ||||||| || ||||||||| ||||||||||| ||| | ||||| || ||||| ||||||||||||||||||||||||||    
T  43504 gctcgcagtgcaagaagcccaagaaggttcggacaggtggcaaggtgtttgctttgactggtacgcaaacagtgaatgaggaccgacttatcagaggtac 43603  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  43604 ttgtttctttaatagtactcctttaattgctattatagata 43644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 128; Significance: 5e-66; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 70554 - 70187
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| ||   ||||||||| ||||| |||||||| |||||||  |||||||||||| ||||||  |||||||||||||| |||    
T  70554 tcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgctttaagtgtggtgagaaaggc 70455  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| ||  |    |||||||| ||||| |||  ||||||  ||||||| || ||  | || || |||||||| || |||||||||||||    
T  70454 cacaagagtaatgtgtgtgaccgagatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtggggatattgtttgct 70355  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||| ||| | || ||||| ||| ||||||||||||| | | | |||||||||| |  ||||||||| ||||||||||| ||| | ||||| || || ||    
T  70354 acaactgtaatgaggaaggacatattagttcgcagtgtacgcagcctaagaaggttaggacaggtggcaaggtgtttgctttgactggtacgcaaacggt 70255  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  70254 gaatgaggaccgacttatcagaggtacttgtttctttaatagtattcctttaattgctattatagata 70187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 391
Target Start/End: Complemental strand, 60857 - 60818
Alignment:
Q  352 tgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  60857 tgtttctttaatagtattcctttaattgctattatagata 60818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 5e-63; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 18273246 - 18273048
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || ||||| |||||||||| | ||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  18273246 cgaagccctacagtgctcctgttgacaaaggggagcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgttacaa 18273147  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcg 206  Q
    |||||||||||||||||||||||||||||| |||| || ||| ||||| |||||||||| |||||| ||||| |||||||||||||| |||||||||||    
T  18273146 gtgtggtgagaagggccacaagagtaatgtttgcattggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcg 18273048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 21742506 - 21742841
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||||||| |||||||  |||||||||||| |||||| ||||||||||||||| ||||||||||||||||| ||  |    |||    
T  21742506 gaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtatgtgaccgagat 21742605  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||||||    |||||  ||||||| || ||  | || || |||||||| || ||| ||||||||| ||| ||| | || ||||| ||| |||    
T  21742606 gagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggggatgttgtttgctacaactgtaatgaggaaggacatatta 21742705  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||||||||| | | | |||||||||| |  ||||||||| ||||| ||||| ||| | ||||| || ||||| ||||||||||||||||||||||||||    
T  21742706 gttcgcagtgtacgcagcctaagaaggttaggacaggtggcaaggtatttgcgttgactggtacgcaaacagtgaatgaggaccgacttatcagaggtac 21742805  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||||||||| |||||||||||||||    
T  21742806 ttgtttctttaatagtactcatttaattgctattat 21742841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 51 - 391
Target Start/End: Original strand, 21738990 - 21739330
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||||||| |||| ||  |||||||||||| |||||| ||||||||||||||| ||||||||||||||||| ||  ||   |||    
T  21738990 gaatgatgagaggaggcctaagaggagaggtgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtttgtgatcgagat 21739089  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||||||    |||||  ||||||| || ||  |||  || || ||||| || ||| || |||||| ||| | | | |||||||||||| | |    
T  21739090 gagaagaagtgctttaggtgtggtcagaaaggacacaccttagttgattgtaagcgtggggatgttttttgctacaactataatgaagaaggtcatatca 21739189  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||||||||| | | | |||||||||| |  ||||||||| ||| ||||| | ||| | ||||| || || |||||||||||||||||||||||||||||    
T  21739190 gttcgcagtgtacggagcctaagaaggttaggacaggtggcaagctgttttctttgactggtacgcaaacggttaatgaggaccgacttatcagaggtac 21739289  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  21739290 ttgtttctttaatagtactcctttaatttctattatagata 21739330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 52 - 391
Target Start/End: Original strand, 22015700 - 22016039
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| ||||| || ||||  |||||||  |||||  | |||||||| | ||||||||| || || ||||| || |||||||| ||  ||   ||||    
T  22015700 aatgatgagaggaggccaaagaagagagatgctcctacaaatattgtttgattcaagtgtggagaaaaaggccaaaaaagtaatgtttgtgatagagatg 22015799  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| |||||||||   |||||  ||||||| || ||  |||| || |||||||| || ||| ||||||| |  || ||  |||| |||| |||| ||||    
T  22015800 agaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgcaagcgtggggatgttgtttgttataactgcaacgaggaagatcatattag 22015899  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    || |||||| | | | || ||||||| |  ||||||||| ||||||||||| ||| | ||||| || ||||| |||||||||||||||||||||||||||    
T  22015900 tttgcagtgtacgcagccgaagaaggttaggacaggtggcaaggtgtttgctttgactggtacgcaaacagtgaatgaggaccgacttatcagaggtact 22015999  T
Q  352 tgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  22016000 tgtttctttaatagtactcatttaattgctattatagata 22016039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 391
Target Start/End: Original strand, 24096542 - 24096909
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| ||   ||||||||| ||||| || ||||| |||||||  |||  |||||||||||| | |||||||||||| || |||    
T  24096542 tcctgctgacaaaggaaaacagaggatgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgtttcaagtgtggtgaaaaaggc 24096641  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||  ||   |   |||||||  ||||| ||    |||||  ||||||| || ||  |||| ||||| ||||| || || ||||||||||    
T  24096642 cacaagagtaatgcttgtggtagagatgagaggaagtgttttaggtgtggtcagaaaggacacacactagctgaatgtaagcgtggggacattgtttgct 24096741  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||| ||  |||||||||||||| | ||||| ||||| |   | || |||||||||   || ||||| || |||||||||||| | ||||| || ||       
T  24096742 acaactgcaacgaagaaggtcatatcagttcacagtgtactcagccgaagaaggctagaaccggtgggaaagtgtttgcattgactggtacgcagactac 24096841  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  24096842 taatgaggactgacttatcagaggtacttgtttctttaataatactcctttaattgctattatagata 24096909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 48426074 - 48425969
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||||||||| ||| | ||||| || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48426074 ggtggaaaggtgtttgctttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 48425975  T
Q  386 ttgata 391  Q
    ||||||    
T  48425974 ttgata 48425969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 38910015 - 38910120
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||| ||||| ||| | ||||| || ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38910015 ggtggaaaggtttttgccttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 38910114  T
Q  386 ttgata 391  Q
    ||||||    
T  38910115 ttgata 38910120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 51 - 379
Target Start/End: Complemental strand, 21961463 - 21961135
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| |||||||| ||||| |||||||  ||| ||||||||||||| |||||||||||||| || ||||||||||| ||||| ||   |   |||    
T  21961463 gaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagat 21961364  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||  |||||||||   |||||  |||| || || |   |||| ||||| ||||| || |||||||| |||| ||| ||  | | ||| |||||| | |    
T  21961363 gagaggaagtgcttcaggtgtggtcagaagggacacagtttagctgaatgtaagcgtggggatattgtctgctacaactgcaatggagagggtcatatca 21961264  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||||||||||    | || ||||||| |   || ||||||||||| ||||| ||| | ||||| || ||    ||||||||||||||||||||||||||    
T  21961263 gttcgcagtgccctgagccgaagaaggttagaactggtggaaaggtatttgctttgactggtacgcagactaccaatgaggaccgacttatcagaggtac 21961164  T
Q  351 ttgtttctttaatagtactcctttaattg 379  Q
    |||||||||||||||||||||||||||||    
T  21961163 ttgtttctttaatagtactcctttaattg 21961135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 19857737 - 19857370
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||| || || || || | ||||||||| ||||| |||||||| |||||||   |||| ||||||||||||| |||||||||||| || |||    
T  19857737 tcctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgcttctaccgagattgtttgcttcaagtgtggtgaaaaaggc 19857638  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||||||  ||   |||||||| || ||||||   |||||  ||||||| || ||  |||| || || ||||| || || |||||||| |    
T  19857637 cacaagagtaatgtctgtgatagagatgagaagaaatgcttcaggtgtggtcagaaaggacacacactagctgattgtaagcggggagacattgtttgtt 19857538  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      || |   | || ||||||||| ||||||||||||| |   | || ||||||| |  |||  |||| || ||||||||  || | ||||| || ||       
T  19857537 ataactacaatgaggaaggtcatattagttcgcagtgtactcaaccgaagaaggttatgaccagtggtaaagtgtttgctctgactggtacgcaaaccac 19857438  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    || |||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19857437 tagtgaggatcgacttattagaggtacttgtttctttaatagtactcctttaactgctattatagata 19857370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 52988936 - 52988837
Alignment:
Q  292 aaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||| | ||||| || ||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52988936 aaggtgtttgcattgactggtacgcagactaccaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 52988837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 20074937 - 20075003
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20074937 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 20075003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 31537186 - 31537291
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||||||||||||  || | ||||| || ||   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31537186 ggtggaaaggtgtttgctctgactggtacgcagactcctaatgaagaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 31537285  T
Q  386 ttgata 391  Q
    ||||||    
T  31537286 ttgata 31537291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 37680250 - 37680145
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||| ||||||||||| ||| | ||||| || ||   |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37680250 ggtgggaaggtgtttgctttgactggtacgcagactcctaatgaggacagacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 37680151  T
Q  386 ttgata 391  Q
    ||||||    
T  37680150 ttgata 37680145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 391
Target Start/End: Complemental strand, 20297543 - 20297477
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20297543 aatgaggaccgacttatcagaggtactggtttctttaatagtactcctttaattgctattattgata 20297477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 386
Target Start/End: Original strand, 20853671 - 20854049
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || |||| || ||||||| |||||||| | ||||||||| |||   |||||| | ||| |||  |||  |||  ||||||| |||||    
T  20853671 cgaagccctacagtgctcctactaacaaaggcaaacaaagattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtttgttacaa 20853770  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
     ||||||| ||||||||||||||||||||  ||||     |||||||| || || |||  ||| ||  |||| || |||| | | || |||||||||||     
T  20853771 atgtggtgtgaagggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaagcgt 20853870  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcaga-caggtggaaaggtgtttgcattg 306  Q
    || ||||| ||||| || ||||||| ||| || || ||  |||| |||||||||| | | |||||||||| ||||| |  | || ||||| || || |||    
T  20853871 ggagatatcgtttgttttaattgtggcgatgagggccacattagctcgcagtgcacgcaacctaagaagg-tcagaacttgagggaaggttttcgctttg 20853969  T
Q  307 gcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
     | ||||| || ||    || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20853970 actggtacccagactaccaacgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 20854049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 18710545 - 18710486
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18710545 tgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 18710486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 20832854 - 20833189
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| |||||||| ||||| |||||||  |||  ||| |||||||||||||||||||| ||||| ||||||||||||||||| || | |   |||    
T  20832854 gaatgatgagaggagacccaagaggagagatgctcctgttgatattgtttgctacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagat 20832953  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| || || |||   |||||  ||||||| || ||  |||| || |||||| | || ||| ||||||| |  || ||  | || ||||||||  | |    
T  20832954 gagaagaattgtttcaggtgtggtcagaaaggacacacactagctgattgcaagaggggagatgttgtttgttataactgcaatgaggaaggtcacatca 20833053  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||||||||| | | | || | ||||| |  ||| ||| | || ||||||||  || | ||||| || ||   || |||||| |||||||||||||||||    
T  20833054 gttcgcagtgtacgcaaccgaggaaggttaggaccggtagtaaagtgtttgctctgactggtacgcaaaccactagtgaggatcgacttatcagaggtac 20833153  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||| || ||||||||||||||||||    
T  20833154 ttgtttctttaatattattcctttaattgctattat 20833189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 31536924 - 31537037
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| || || ||   ||||||||| |||||||| ||||| |||||||  ||| ||||||||||||| || |||||||||||||| |||    
T  31536924 tcctgctgacaaaggaaagcagaggatgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttataagtgtggtgagaaaggc 31537023  T
Q  124 cacaagagtaatgt 137  Q
    |||||||| |||||    
T  31537024 cacaagagcaatgt 31537037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 52989218 - 52989091
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaag 108  Q
    ||||| |||| || ||||||||||||||| || || ||| | ||||||||| ||||| |||||||| |||||||  ||| ||||||||||||| ||||||    
T  52989218 aagccttacagtgctcctgctgacaaaggaaagcagaagat-gaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaag 52989120  T
Q  109 tgtggtgagaagggccacaagagtaatgt 137  Q
    |||||||| || ||||||||||| |||||    
T  52989119 tgtggtgaaaaaggccacaagagcaatgt 52989091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 38909783 - 38909866
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  |||  |||||||||||||||||||||||||||||| |||||||||||||||||    
T  38909783 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 38909866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 48426306 - 48426223
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  |||  |||||||||||||||||||||||||||||| |||||||||||||||||    
T  48426306 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 48426223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 394
Target Start/End: Complemental strand, 16379461 - 16379156
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatac 188  Q
    ||||||||||||||||    ||||||||||| |||||||| |||||||| || | ||  |||| ||||  ||| ||||  ||||| |||||||| |||||    
T  16379461 ctgagattgtttgctatgcttgtggtgagaaaggccacaaaagtaatgtttgtactggagatgtgaaatggtgtttccgttgtggtaagaaaggacatac 16379362  T
Q  189 gatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggt 288  Q
    | |  | || || ||||  | ||||||||| || ||||||||  | ||||| |||||  ||  |||||| || | ||| || ||||||||||||||   |    
T  16379361 gcttccagagtgtaagcatgatgatattgtgtgtttcaattgcaatgaagagggtcacattgtttcgcaatgtaagaagccaaagaaggctcagactact 16379262  T
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 388  Q
    || |  |||||||| ||| | ||||| || ||||  || ||||| ||  | ||||||||||| |||| |||| || ||||||||||||||||||||||||    
T  16379261 ggtagagtgtttgctttgactggtacgcaaacagagaacgaggatcgtttgatcagaggtacatgttactttgatggtactcctttaattgctattattg 16379162  T
Q  389 atattg 394  Q
    ||||||    
T  16379161 atattg 16379156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 20297816 - 20297733
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  ||| ||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  20297816 tgatgacaggaggcccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaatgccacaagagtaatgt 20297733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 37680446 - 37680399
Alignment:
Q  90 tgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  37680446 tgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 37680399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 391
Target Start/End: Original strand, 21045196 - 21045418
Alignment:
Q  169 tgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaacc 268  Q
    ||||||||||| ||||||||  | || ||||| |||| || |||| | || || |||||||   | |||||||||||| ||  ||| || |||  ||| |    
T  21045196 tgtgggaagaaggggcatactcttgcagaatgtaagcacgatgatgtggtgtgtttcaattacaatgaagaaggtcatattgtttcacaatgcgagaaac 21045295  T
Q  269 ctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtac 368  Q
    |||||||| |||||||  ||||||  |||||||| ||| | ||||| || ||||  |||||||| ||  | || | |||||| |||| |||| |||||||    
T  21045296 ctaagaagactcagactagtggaagagtgtttgctttgactggtacgcaaacagagaatgaggatcgtttgattataggtacatgttactttgatagtac 21045395  T
Q  369 tcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||    
T  21045396 tcctttaattgctattattgata 21045418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 20074666 - 20074749
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| | |||||| |||||||  || ||||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  20074666 tgatgacaggaggcttaagaggagagatgctcccactgagattgtgtgttacaagtgtggtgagaaaggccacaagagcaatgt 20074749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 163 - 391
Target Start/End: Original strand, 22435799 - 22436027
Alignment:
Q  163 ttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgca 262  Q
    |||| |||||| ||||| || |||||  |||| || |||||||   |||||||||| |||||||||||  | ||||| |||||  || |||| |||||||    
T  22435799 ttccgatgtggcaagaagggtcatacattagctgattgcaagcatagtgatattgtgtgcttcaattgcaaggaagagggtcacattggttctcagtgca 22435898  T
Q  263 ggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaa 362  Q
     | | ||||||| ||| | |||   ||| | ||| |||||  |||| |||||| | ||||  |||||||| ||  | ||||||||||||||||   ||||    
T  22435899 agcaacctaagagggcgccgactactggtagggtttttgctctggctggtacagagacagagaatgaggatcgcttgatcagaggtacttgttatattaa 22435998  T
Q  363 tagtactcctttaattgctattattgata 391  Q
    || |||||||||| |||||||||||||||    
T  22435999 taatactcctttagttgctattattgata 22436027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 21752163 - 21752109
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    ||||||||||||||||  ||| ||||||| |||||| ||||||||||||||||||    
T  21752163 atcagaggtacttgttattttgatagtacacctttagttgctattattgatattg 21752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 391
Target Start/End: Original strand, 24784929 - 24785151
Alignment:
Q  169 tgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaacc 268  Q
    ||||| ||||| || |||||| |||| || ||||||||   ||||||||| || ||||||||  | ||||| |||||  || |||| ||||||| | | |    
T  24784929 tgtggcaagaagggtcatacggtagctgactgcaagcgtaatgatattgtgtgtttcaattgcaatgaagagggtcacattggttctcagtgcaagcagc 24785028  T
Q  269 ctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtac 368  Q
    |||||||||| | |||   ||| | ||| ||||| ||| | ||||| || ||||  |||||||| ||  | |||||||||||||| |   |||||| |||    
T  24785029 ctaagaaggcgccgactactggtagggtttttgctttgactggtactcagacagagaatgaggatcgtttgatcagaggtacttgctatattaataatac 24785128  T
Q  369 tcctttaattgctattattgata 391  Q
    ||||||| |||||||||||||||    
T  24785129 tcctttagttgctattattgata 24785151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 17042258 - 17042309
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||   |||||| |||||||||| |||||||||||||||    
T  17042258 atcagaggtacttgttatattaataatactcctttagttgctattattgata 17042309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 21842328 - 21842274
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    |||||||||||||| |   |||||| |||||||||| ||||||||||||||||||    
T  21842328 atcagaggtacttgctatattaataatactcctttagttgctattattgatattg 21842274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 22401838 - 22401770
Alignment:
Q  210 tgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggc 278  Q
    |||||| || |||||||||||| | ||||| |||||  || |||||||||||| ||| |||||||||||    
T  22401838 tgatatagtatgcttcaattgtaatgaagagggtcacattggttcgcagtgcaagaagcctaagaaggc 22401770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 121; Significance: 7e-62; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 51 - 391
Target Start/End: Complemental strand, 176406 - 176067
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||| ||| |||||||  ||||| |||||||| || | |||||||||||| || ||||||||||||||||| ||  |   ||||    
T  176406 gaatgatgagaggaggcctaggaggagagatgctcctacagagattgtctgtttcaagtgtggtgaaaaaggccacaagagtaatgtatgtgaccgtgat 176307  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||| ||    ||||| |||||||| || ||  |||| || |||||||| |||||| |||||||||  |||||||| |||||||||||| |||    
T  176306 gagaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagcgtggtgatgttgtttgctataattgtgatgaagaaggtcatatta 176207  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    | |||||||||||||| | | ||||||||| ||||||||| ||||||||||| ||| | ||||| || || |||||| | ||||||||||||||||||||    
T  176206 gctcgcagtgcaggaagctttagaaggctctgacaggtggcaaggtgtttgctttgactggtacgcaaactgttaataaagaccgacttatcagaggtac 176107  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    || ||||||| ||||||||||||||||||||||||| ||||    
T  176106 ttatttcttt-atagtactcctttaattgctattatagata 176067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 52 - 391
Target Start/End: Original strand, 98469 - 98808
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| ||||| || ||| | |||||||  ||| ||||||| ||||| ||||||||||| ||||| ||||||||||||||||| || | |   ||||    
T  98469 aatgatgagaggaggcccaagtggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatg 98568  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| ||||| |||   |||||  ||||||| || ||  |||| || |||||||| |||||| |||| || |  || ||  ||||||| || ||| | ||    
T  98569 agaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgatgttgtatgttataactgcaacgaagagggccatatcag 98668  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    |||||||||||   | || ||||||| |  ||| ||||| |||||||||||  || | |||||||| ||   || ||||||||||||||||| |||||||    
T  98669 ttcgcagtgcacacagccgaagaaggttaggactggtggtaaggtgtttgctctgactggtacacaaaccactagtgaggaccgacttatcaaaggtact 98768  T
Q  352 tgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  98769 tgtttctttaatagtactcctttaattgctattatagata 98808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 24 - 391
Target Start/End: Original strand, 4162 - 4529
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| || | ||||||||| ||||| |||||||| |||||||  |||||||||||| |||||| ||||||||||||||| | |    
T  4162 tcctgctgacaaaggtaaacagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaagac 4261  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
     |||| |||||||| ||  ||   |||||||| ||||||||    |||||  ||||||| || ||  | || || |||||||| || |||||||||||||    
T  4262 tacaaaagtaatgtgtgtgatcgagatgagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggggatattgtttgct 4361  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||| ||| | || ||||| ||| ||||||||||||| | | | |||||||||| |  ||||||||| ||||||||||| ||| | ||||| || || ||    
T  4362 acaactgtaatgaggaaggacatattagttcgcagtgtacgcagcctaagaaggttaggacaggtggcaaggtgtttgctttgactggtacgcagacggt 4461  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  4462 gaatgaggaccgacttatcagaggtacttgtttctttaatagtactcatttaatttctattatagata 4529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 26 - 391
Target Start/End: Complemental strand, 2164 - 1800
Alignment:
Q  26 ctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcca 125  Q
    ||||||||||||| ||||| ||   ||||||||| ||||| ||||||||  ||||||  |||||||| ||| |||||| ||||||||||||||| |||||    
T  2164 ctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggtgagatgctcctactgaaattatttgcttcaagtgtggtgagaaaggcca 2065  T
Q  126 caagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttc 225  Q
    |||||||||||| ||  |    |||||||| ||||||||    |||||  ||||||| |||||  |||| || || ||||| || ||| |||| ||||      
T  2064 caagagtaatgtgtgtgaccgagatgagaagaagtgctttaggtgtggacagaaaggacatactttagctgattgtaagcgtgg-gatgttgtatgctat 1966  T
Q  226 aattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtta 325  Q
    |||||||| ||||| || ||| |||| |||||||||| ||| || ||||||  || ||||||||| ||||||||||| ||| | ||||| || || || |    
T  1965 aattgtgatgaagagggacatattagctcgcagtgcaagaagcccaagaagtttcggacaggtggcaaggtgtttgctttgactggtacgcaaacggtga 1866  T
Q  326 atgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  1865 atgaggaccgacttatcaaaggtacttgtttctttaatagtactcctttaattgctattatagata 1800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 111; Significance: 7e-56; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 25 - 391
Target Start/End: Complemental strand, 43143 - 42777
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || ||||| || | ||||||||| ||||| |||||||| |||||||  |||||||||||  |||| | ||||||| ||||||| ||||    
T  43143 cctgctgacaagggtaaacagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgagataatttgtttcaagtgttgtgagaaaggcc 43044  T
Q  125 acaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgctt 224  Q
    ||||||||||||| ||  |    |||||||| ||||||||    ||| |  ||||||| || ||  ||||||| |  ||||| || ||| |||||||||     
T  43043 acaagagtaatgtttgtgaccgagatgagaagaagtgctttaggtgtagtcagaaaggacacactttagcggattttaagcgtggggatgttgtttgcta 42944  T
Q  225 caattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtt 324  Q
    ||||||| | | |||||||||| ||||||||||||| | | | |||||||||  |  ||||||||| ||||||||||| ||  | ||| | || ||||||    
T  42943 caattgtaatgcagaaggtcatattagttcgcagtgtacgcaacctaagaagattaggacaggtggcaaggtgtttgctttcactggtgcgcaaacagtt 42844  T
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  42843 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttatttgctattatagata 42777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 34783 - 34416
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||| || || ||||| |  |||||||| ||||| || ||||| |||||||  |||||||| |||||||| | ||||||||||||||| |||    
T  34783 tcctgctgacaagggtaagcaaaggttaaatgatgagaggaggcccaagaggagagatgctcctactgacattgtttgtttcaagtgtggtgagaaaggc 34684  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||||||  ||   |||||||| |||||||||   |||||  ||||||| || ||  |||  || || ||||| || ||  ||||||| |    
T  34683 cacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtgtggttagaaaggacacacattagttgattgtaagcgtggggacgttgtttgtt 34584  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      || ||  | || ||||||||| |||||||| |||| | | | || ||||||| |  ||||||||||||||||||||| ||| | ||||| || |||||    
T  34583 ataactgcaatgaggaaggtcatattagttcgtagtgtacgcagccgaagaaggttaggacaggtggaaaggtgtttgccttgactggtacgcaaacagt 34484  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  34483 taatgaggaccgacttattagaggtacttgtttctttaatagtactcctttaactgctattatagata 34416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 25 - 391
Target Start/End: Original strand, 63378 - 63744
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || || ||||| | ||||||||| ||||| || ||||| |||||||  |||||||| |||||||| | |||||||||||| || ||||    
T  63378 cctgctgacaagggtaagcaaagattgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgataaaggcc 63477  T
Q  125 acaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgctt 224  Q
    ||||||||||||| ||  |    |||||||| ||||| |||   |||||  ||||||| || ||  |||| || || ||||  || |||||||||||||     
T  63478 acaagagtaatgtttgtgaccgagatgagaagaagtgtttcaggtgtggtcagaaaggacacactttagctgattgtaagcatggggatattgtttgcta 63577  T
Q  225 caattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtt 324  Q
    ||| | | | || ||||||||| | ||||||||||| | | | |||||||||| |  |||| |||| ||||||||||| ||| | ||||| || |||||     
T  63578 caactataatgaggaaggtcatatcagttcgcagtgtacgcagcctaagaaggttaggacaagtggcaaggtgtttgctttgactggtacgcaaacagtg 63677  T
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  63678 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcttttaattgctattatagata 63744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 51 - 391
Target Start/End: Complemental strand, 5599 - 5260
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || ||||| |||||||  |||||||| |||||||| | |||||||||||| || ||||||||||||||||| ||  |    |||    
T  5599 gaatgatgagaggaggcc-aagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagat 5501  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||||||||   |||||  ||||||| || ||  |||| || || ||||| || ||| ||||||||| ||| ||| | |||||||||||| | |    
T  5500 gagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgttgtttgctacaactgtaatgaagaaggtcatatca 5401  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||||||||| | | | ||||||||| ||  | ||||||| ||||| ||||| ||| | ||||| || ||||| ||||||||||||||||||||||||||    
T  5400 gttcgcagtgtacgcagcctaagaagtctaggtcaggtggcaaggtttttgcgttgactggtacgcaaacagtgaatgaggaccgacttatcagaggtac 5301  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  5300 ttgtttctttaatagtactcatttaattgctattatagata 5260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 52097 - 51730
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| ||   ||||||||| ||||| |||| ||| |||||||  |||||||||||| | || | ||||||||||||||| |||    
T  52097 tcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaggaggagagatgctcctactgagattatctgtttcaagtgtggtgagaaaggc 51998  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| ||  ||   |||||||| ||||||||    ||||| |||||||| || ||  ||||  | |||||||  |||||| |||||| ||    
T  51997 cacaagagtaatgtatgtgatcgagatgagaagaagtgctttaggtgtggtaagaaaggacacactttagcttattgcaagcatggtgatgttgttttct 51898  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      || ||||| ||||||||| || ||||||| ||||| | | | || ||||||| || ||||||||| ||||||||| | ||| | ||||| || |  ||    
T  51897 ataactgtgatgaagaaggtaatattagttcacagtgtacgcagccaaagaaggttcggacaggtggcaaggtgtttactttgactggtacgcagattgt 51798  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  51797 gaatgaggactgacttatcagaggtacttatttctttaatagtactcctttaattgctattatagata 51730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 9060 - 8693
Alignment:
Q  24 tcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaaggg 122  Q
    |||||||||||||||||| || ||| | ||||||||| || ||||| ||||| |||||||  |||  |||||||||||| || |||||||| ||||| ||    
T  9060 tcctgctgacaaagggaagcagaagct-gaatgatgagagaagacccaagaggagagatgctcctgatgagattgtttgttataagtgtggcgagaatgg 8962  T
Q  123 ccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgc 222  Q
    ||||||||||||||| || | |   |||||||| ||||| |||   |||||  ||||||| || ||  |||| || |||||||| ||||| |||||||||    
T  8961 ccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgacattgtttgc 8862  T
Q  223 ttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacag 322  Q
    | ||| ||  |||||||||| ||| | |||||||||||||   | || ||||||| |   || ||||| || |||||||||||| | ||||| |||||      
T  8861 tacaactgcaacgaagaaggccatatcagttcgcagtgcactcaaccgaagaaggttagtaccggtgggaaagtgtttgcattgactggtacgcatacta 8762  T
Q  323 ttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8761 ctagtgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 8693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 100; Significance: 2e-49; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 30070 - 29703
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||| || || || ||||  |||||||| ||||| || ||||| |||||||| |||||||| || ||||||| ||||||||||||||| |||    
T  30070 tcctgctgacaagggtaagcagagtttaaatgatgagaggaggcccaagaggagagatgttcctactgacatagtttgcttcaagtgtggtgagaaaggc 29971  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    ||||||||||| || ||  ||   |||||||| |||||||||   |||||  | || || || ||  |||| || || ||| | || || || ||||| |    
T  29970 cacaagagtaacgtttgtgatagagatgagaagaagtgcttcaggtgtggtcaaaagggacacactctagctgattgtaagtgtggggacatcgtttgtt 29871  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      | |||  | || ||||||||| | ||||||||||| | | | || ||||||| |  ||||||||| ||||||||||| ||| | ||||| || |||||    
T  29870 atatttgcaatgaggaaggtcatatcagttcgcagtgtacgcaaccgaagaaggttaggacaggtggtaaggtgtttgctttgactggtacgcagacagt 29771  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29770 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 29703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 49065 - 49400
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||||||||| || || || || ||||  ||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||| || |     |||    
T  49065 gaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagagtaatgtttgtaccaaggat 49164  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| || || |||   |||||  ||||||| || ||  ||||  | |||||||| |||||| | |||||||  |||||||| ||||| || ||| |||    
T  49165 gagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtggtgatgtagtttgctataattgtgatgaagagggccatatta 49264  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||| |||||||   | || ||||||| |   || ||| | || |||||||| ||||| ||||| || ||   |||||||||||| ||||||||||||||    
T  49265 gttcacagtgcacacaaccgaagaaggttagaactggtaggaaagtgtttgctttggctggtacgcagactactaatgaggaccgtcttatcagaggtac 49364  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||||||||||||||||||||||    
T  49365 ttgtttctttaatagtactcctttaattgctattat 49400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 58099 - 58434
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||||||||| || || || || ||||  ||| ||||||| ||||| ||||||||||| ||||||||||||||||||||||| || |     |||    
T  58099 gaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagagtaatgtttgtaccaaggat 58198  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| || || |||   |||||  ||||||| || ||  ||||  | |||||||| |||||| | |||||||  |||||||| ||||| || ||| |||    
T  58199 gagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtggtgatgtagtttgctataattgtgatgaagagggccatatta 58298  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||| |||||||   | || ||||||| |   || ||| | || |||||||| ||||| ||||| || ||   |||||||||||| ||||||||||||||    
T  58299 gttcacagtgcacacaaccgaagaaggttagaactggtaggaaagtgtttgctttggctggtacgcagactactaatgaggaccgtcttatcagaggtac 58398  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||||||||||||||||||||||    
T  58399 ttgtttctttaatagtactcctttaattgctattat 58434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 64487 - 64822
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||||||||| || || || || ||||  ||| ||||||| ||||| ||||||||||| ||||| ||||||||||||||||| || |     |||    
T  64487 gaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggat 64586  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| || || |||   |||||  ||||||| || ||  ||||  | |||||||| |||||| | |||||||  |||||||| ||||| || ||| |||    
T  64587 gagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtggtgatgtagtttgctataattgtgatgaagagggccatatta 64686  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||| |||||||   | || ||||||| |   || ||| | || |||||||| ||||| ||||| || ||   |||||||||||| ||||||||||||||    
T  64687 gttcacagtgcacacaaccgaagaaggttagaactggtaggaaagtgtttgctttggctggtacgcagactactaatgaggaccgtcttatcagaggtac 64786  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||||||||||||||||||||||    
T  64787 ttgtttctttaatagtactcctttaattgctattat 64822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 25 - 391
Target Start/End: Complemental strand, 50550 - 50184
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || || || || | ||||||||| ||||| || ||||| |||||||  |||||||| |||||||| | |||||||||||| || | ||    
T  50550 cctgctgacaagggtaagcatagatggaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaagacc 50451  T
Q  125 acaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgctt 224  Q
    ||||||||||||| ||  |    |||||||| ||||| |||   |||||  ||||||| || ||  |||| || || ||||| || |||||||||||||     
T  50450 acaagagtaatgtttgtgaccgagatgagaagaagtgtttcaggtgtggtcagaaaggacacaccttagctgattgtaagcgtggggatattgtttgcta 50351  T
Q  225 caattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtt 324  Q
    ||| ||  | || ||||||||| | |||||| |||| |   | |||||||||| |  ||||||||| ||||||||||| ||| | ||||| || |||||     
T  50350 caactgcaatgaggaaggtcatatcagttcgtagtgtacccagcctaagaaggttaggacaggtggcaaggtgtttgctttgactggtacgcaaacagtg 50251  T
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50250 aatgaggaccgacttattagaggtacttgtttctttaatagtactcctttaattgctattatagata 50184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 391
Target Start/End: Original strand, 1153 - 1536
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    ||||||| |||| || |||||||||||| || ||||| ||   ||||||||| ||||| || ||||| |||||||  |||||||||||  |||| | |||    
T  1153 cgaagccatacagtgctcctgctgacaagggtaaacagaggctgaatgatgagaggaggcccaagaggagagatgctcctactgagataatttgtttcaa 1252  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    ||||||||| || ||||||||||||||||  ||  ||   |||||||| |||||||||   |||||  ||||||| || ||  |||| ||||| |||||     
T  1253 gtgtggtgaaaaaggccacaagagtaatgcttgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgaatgtaagcgt 1352  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattgg 307  Q
    || ||||||||||||| || |||  | || ||||||||| | ||||||||||| |   | |||||||||| |  ||||||||| || ||||| || |||     
T  1353 ggggatattgtttgctacacttgcaatgaggaaggtcatatcagttcgcagtgtactcagcctaagaaggttaggacaggtggtaaagtgttcgcgttga 1452  T
Q  308 caggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    | || |  || ||   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1453 ctggcatgcagactactagtgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 1536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 6048 - 5681
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| |    ||||||||| ||||| |||| ||| |||||||  |||| ||||| ||| |  | ||||||||||||||| |||    
T  6048 tcctgctgacaaaggaaaacagatgctgaatgatgagaggaggcctaggaggagagatgcccctaatgagactgtctatttcaagtgtggtgagaaaggc 5949  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| ||  ||   ||| |||| ||||| |||  ||||||  ||||||| || ||  |||| || |||||||| || ||| ||||||| |    
T  5948 cacaagagtaatgtgtgtgattgagataagaagaagtgtttcagatgtggacagaaaggacacacattagctgattgcaagcgtggggatgttgtttgtt 5849  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      |||||||| ||||| || ||  |||| ||| |||||| ||| |||||||||| ||  || ||||| | |||||||||  |    ||||| || |||||    
T  5848 ataattgtgatgaagagggacacattagctcgtagtgcaagaaacctaagaaggttcgaaccggtggcatggtgtttgctctaattggtacgcaaacagt 5749  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5748 gaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 5681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 391
Target Start/End: Complemental strand, 8206 - 7823
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    ||||||| |||| || |||||||||||| || ||||| ||   ||||||||| ||||| || ||||| |||||||  |||||||||||  |||| | |||    
T  8206 cgaagccatacagtgctcctgctgacaagggtaaacagaggctgaatgatgagaggaggcccaagaggagagatgctcctactgagataatttgtttcaa 8107  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    ||||||||| || ||||||||||||||||  ||  ||   |||||||| |||||||||   |||||  ||||||| || ||  |||| ||||| |||||     
T  8106 gtgtggtgaaaaaggccacaagagtaatgcttgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgaatgtaagcgt 8007  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattgg 307  Q
    || ||||||||||||| || |||  | || ||||||||| | ||||||||||| |   | |||||||||| |  ||||||||| || ||||| || |||     
T  8006 ggggatattgtttgctacacttgcaatgaggaaggtcatatcagttcgcagtgtactcagcctaagaaggttaggacaggtggtaaagtgttcgcgttga 7907  T
Q  308 caggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    | || |  || ||   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7906 ctggcatgcagactactagtgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 7823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 51 - 181
Target Start/End: Original strand, 30898 - 31028
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  30898 gaatgatgagaggagaactaagagaagagatgttcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgcttgcaatggtgat 30997  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaag 181  Q
    ||||| |||||||| | ||||||||||||||    
T  30998 gagaagaagtgctttcgatgtgggaagaaag 31028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 211 - 391
Target Start/End: Complemental strand, 12219 - 12039
Alignment:
Q  211 gatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcag 310  Q
    ||||||||||||| ||| ||| | |||||||| ||| ||||||| ||||| | | | |||||||||| || ||||||||| ||||| ||||| ||| | |    
T  12219 gatattgtttgctacaactgtaatgaagaaggacatattagttcacagtgtacgcagcctaagaaggttcggacaggtggcaaggtatttgcgttgactg 12120  T
Q  311 gtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||| || || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12119 gtacgcaaactgtgaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 12039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 24 - 391
Target Start/End: Complemental strand, 11423 - 11056
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| || || | || ||||||||| ||||| |||||||| |||||||  ||| ||||||||||||| |||||||||||||| || |||    
T  11423 tcctgctgacaaaggaaagcagattttgaatgatgataggagtcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggc 11324  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||| ||||  ||   |   |||||||  |||||||||   |||||  |||| || ||  |  |||| ||||| ||||| || || ||||| ||||    
T  11323 cacaagagcaatgcttgtggtagagatgagaggaagtgcttcaggtgtggtcagaagggacacgcactagctgaatgtaagcgtggggacattgtctgct 11224  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
     ||| ||  | ||||| |||||| | || || ||||| |   | || |||||||||  ||| || || ||||||||||| ||| | ||||| || ||  |    
T  11223 acaactgcaatgaagagggtcatatcagctcacagtgtactcagccgaagaaggctaggaccggagggaaggtgtttgcgttgactggtacgcagactat 11124  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11123 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 11056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 36245 - 36096
Alignment:
Q  53 atgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatga 152  Q
    ||||||| ||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||||| |||||||||||||||||||| |||| ||| ||    
T  36245 atgatgagaggagacctaagagaagagatgcccctactaagattgtttgctacaggtgtggtgagaaaggccacaagagtaatgtctgtaatggtgagga 36146  T
Q  153 gaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagc 205  Q
    |   |||||||||| |||||| | ||||||||||| |||||||||||| ||||    
T  36145 g---aagtgcttcctatgtggaaggaaagggcataagatagcggaatgtaagc 36096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 89 - 391
Target Start/End: Original strand, 16532 - 16834
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatac 188  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||  ||   || |||||  |||  ||| ||||| ||||| | ||||||||||||    
T  16532 ctgaggttgtttgctacaagtgtggtgagaagggccacaagagtaatgcttgtcctggtgatgtaaaacggtgtttccattgtggtaggaaagggcatac 16631  T
Q  189 gatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggt 288  Q
     ||    || ||||||   | ||||||  | || ||||| | | | |||||||||||  || |||||||||||| ||| ||||||||| ||||| |  ||    
T  16632 tattatagagtgcaagaatgatgatatgatgtgtttcaactataatgaagaaggtcacattggttcgcagtgcaagaagcctaagaagactcaggccagt 16731  T
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 388  Q
    || || |||||||| ||| | ||||| || ||||| |||||||||||  | ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  16732 gggaaagtgtttgctttgactggtacgcaaacagtgaatgaggaccggttgatcagaggtacatgtttctttaattgtactcctttaattgctattattg 16831  T
Q  389 ata 391  Q
    |||    
T  16832 ata 16834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 52 - 386
Target Start/End: Original strand, 769 - 1103
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| ||||| || ||||| |||||||  ||||| ||||||||||||| |||||||||||| || |||||||||||||| || ||  ||   ||||    
T  769 aatgatgagaggaggcccaagaggagagatgctcctaccgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaacgtttgtgatagagatg 868  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| |||||||||   |||||  |||||||  | ||  |||| || || ||||| || || |||||||  |  || ||  | || ||||||||| | ||    
T  869 agaagaagtgcttcaggtgtggtcagaaaggatacactctagctgattgtaagcgtggggacattgtttattataactgcaatgaggaaggtcatatcag 968  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    ||||||||| | | | || ||||||| |  ||| ||||| ||||||||||| ||| | ||||| || |||  |||||||||| |||||||||||||||||    
T  969 ttcgcagtgtacgcaaccgaagaaggttaggactggtggtaaggtgtttgctttgaccggtacgcaaacaactaatgaggacagacttatcagaggtact 1068  T
Q  352 tgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||||||||||||||||||||||||    
T  1069 tgtttctttaatagtactcctttaattgctattat 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 81; Significance: 5e-38; HSPs: 5)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 51 - 391
Target Start/End: Original strand, 39218 - 39558
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || ||||| |||||||  ||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||   |||    
T  39218 gaatgatgagaggaggcccaagaggagagatgctcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtgataaagat 39317  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||||||||   |||||  ||||||| || ||  ||||  | || ||||| || ||| |||||||||  || ||  | || ||||||| | | |    
T  39318 gagaagaagtgcttcaggtgtggtcagaaaggacacacattagctaattgtaagcggggagatgttgtttgctataactgcaatgaggaaggtcgtatca 39417  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||||||||| |   |  | ||||||| |  ||| ||||| || ||||||||  || | ||||| || ||   || |||||| |||||||||||||||||    
T  39418 gttcgcagtgtacacaatcgaagaaggttaggaccggtggtaaagtgtttgctctgactggtacgcaaaccactagtgaggatcgacttatcagaggtac 39517  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39518 ttgtttctttaatagtactcctttaattgctattattgata 39558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 391
Target Start/End: Complemental strand, 5296 - 4994
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatac 188  Q
    ||||||||||||||||||  ||||||||||| ||||| ||||||||||  ||   ||  |||| ||||  ||| || || ||||| ||||| || |||||    
T  5296 ctgagattgtttgctacacttgtggtgagaaaggccataagagtaatgcttgtcctggggatgtgaaacggtgttttcattgtggtaagaagggccatac 5197  T
Q  189 gatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggt 288  Q
      | || ||||| ||||  | |||| |||| || || |||||  | |||||||||||| || | ||||| |||| ||| ||||||||| ||||| |  ||    
T  5196 tcttgctgaatgtaagcatgatgatgttgtatgtttaaattgcaatgaagaaggtcatattgggtcgcaatgcaagaaacctaagaagactcagtctagt 5097  T
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 388  Q
    ||||  || ||| | ||| | ||||| || ||||  |||||||| ||| | || |||||||| ||||  ||| ||||||  |||||| ||||||||||||    
T  5096 ggaagagttttttctttgactggtacgcagacagagaatgaggatcgattaattagaggtacatgttattttgatagtatacctttagttgctattattg 4997  T
Q  389 ata 391  Q
    |||    
T  4996 ata 4994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 14554 - 14500
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    |||||||||||||| |   |||||| |||||||||| ||||||||||||||||||    
T  14554 atcagaggtacttgctatattaataatactcctttagttgctattattgatattg 14500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 14803 - 14757
Alignment:
Q  91 gagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||||| | ||||||||| ||||| |||||||||||||||||    
T  14803 gagattgtttgtttcaagtgtggcgagaatggccacaagagtaatgt 14757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 180763 - 180809
Alignment:
Q  90 tgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    |||| ||||||| ||||| ||||||| ||||||||||||||||||||    
T  180763 tgaggttgtttgttacaaatgtggtgtgaagggccacaagagtaatg 180809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 80; Significance: 2e-37; HSPs: 4)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 348
Target Start/End: Complemental strand, 5885 - 5562
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || || || || | ||||||||| ||||| | |||||| |||||||  |||||||||||  |||||| ||||||||||||||| ||||    
T  5885 cctgctgacaagggtaagcagagattgaatgatgagaggaggcttaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaaggcc 5786  T
Q  125 acaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgctt 224  Q
    |||||||||| || ||  ||   |||||||| ||||||||    |||||  ||||||| || ||  |||| || || ||||| || ||| |||||||||     
T  5785 acaagagtaacgtgtgtgatcgagatgagaagaagtgctttaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgttgtttgcta 5686  T
Q  225 caattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtt 324  Q
    ||||||| | |||||||||||| | ||||||||||| | | | |||||||||| |  ||||||||| || |||||||| ||| | ||||| || || ||     
T  5685 caattgtaatgaagaaggtcatatcagttcgcagtgtacgcaacctaagaaggttaggacaggtggcaaagtgtttgcgttgactggtacgcaaacggtg 5586  T
Q  325 aatgaggaccgacttatcagaggt 348  Q
    ||||||||||||||||||||||||    
T  5585 aatgaggaccgacttatcagaggt 5562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 11904 - 11968
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11904 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 11968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 2998 - 2950
Alignment:
Q  343 agaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2998 agaggtacttgtttctttaatagtactcctttaattgctattatagata 2950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 11667 - 11714
Alignment:
Q  90 tgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||| || |||||||||||| |||| |||||||||||||||||    
T  11667 tgagattgtatgatacaagtgtggtaagaaaggccacaagagtaatgt 11714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 202 - 391
Target Start/End: Complemental strand, 12995 - 12806
Alignment:
Q  202 aagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttg 301  Q
    ||||| || ||| ||||||||| ||| ||| | |||||||||||| | ||||||||||| | | | |||||||||| |  ||||||||| ||||||||||    
T  12995 aagcgtggggatgttgtttgctacaactgtaatgaagaaggtcatatcagttcgcagtgtacgcagcctaagaaggttaggacaggtggcaaggtgtttg 12896  T
Q  302 cattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    | ||  | ||||| || || || |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  12895 cgttaactggtacgcaaacggtgaatgaggaccaacttatcaggggtacttgtttctttaatagtactcctttaattgctattatagata 12806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 51 - 386
Target Start/End: Complemental strand, 7457 - 7122
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || || || |||||||  ||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||| || | |   |||    
T  7457 gaatgatgagaggaggcccaataggagagatgctcctgctgagattgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagat 7358  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||||||||   |||||  ||||||| || ||  |||| || |||||||| |||||| ||||||| |  || | ||| ||||| || ||| |||    
T  7357 gagaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgatgttgtttgttataactatgatgaagaggggcatatta 7258  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    | ||||| |||| ||| || ||||||  |  ||| ||||| || ||||||||  |  | || || || ||   || |||||| |||||||||||||||||    
T  7257 gctcgcaatgcaagaagcccaagaagattaggaccggtggtaaagtgtttgctctaactggcacgcaaaccactagtgaggatcgacttatcagaggtac 7158  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||||||||||||||||||||||    
T  7157 ttgtttctttaatagtactcctttaattgctattat 7122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 76; Significance: 5e-35; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 386
Target Start/End: Complemental strand, 70834 - 70456
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    |||||||||||| || ||||||||||||||| |||||||| | ||||||||| ||| | |||| | | |||||||  |||  |||  ||||||| |||||    
T  70834 cgaagccctacattgttcctgctgacaaaggaaaacaaagattgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaa 70735  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgc 207  Q
    |||||||| ||| ||||||||| ||||||||||||     |||||||| ||||| |||  ||| ||  | ||||| |||  | | || |||||||||||     
T  70734 gtgtggtgcgaaaggccacaagggtaatgtctgcaccaaagatgagaagaagtgtttcagatgcggtcataaaggtcatgtgttggctgaatgcaagcgt 70635  T
Q  208 ggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcaga-caggtggaaaggtgtttgcattg 306  Q
    || ||||||||||| |  || ||| | || || || ||  ||||||| ||||||| | | |||||||||| ||||| | || ||||| || ||||  |||    
T  70634 ggagatattgtttgttataactgtaatgaggagggccacattagttcacagtgcacgcaacctaagaagg-tcagaactggaggaaaagtatttgttttg 70536  T
Q  307 gcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
     | ||||| || ||    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  70535 actggtacgcagactaccaatgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 70456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 24 - 391
Target Start/End: Original strand, 1810 - 2177
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| ||   ||||||||| ||||| || ||||| | |||||  ||| |||| |||||||||||||||||||||||||| |||    
T  1810 tcctgctgacaaaggaaaacagaggctgaatgatgagaggaggcccaagaggatagatgctcctgctgaaattgtttgctacaagtgtggtgagaaaggc 1909  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgct 223  Q
    |||||||||||||| ||  ||   |||||||| |||||||||   |||||  ||||||| || ||  |||| || || ||||| || ||  |||||||||    
T  1910 cacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcggggagacgttgtttgct 2009  T
Q  224 tcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagt 323  Q
      || ||  | || ||||||||| | ||||||||||| |   | || ||||||| |  ||| ||||| || ||||||||  || | ||||| ||  |       
T  2010 ataactgcaatgaggaaggtcatatcagttcgcagtgtacacaaccgaagaaggttaggaccggtggtaaagtgtttgctctgactggtacgcaacccac 2109  T
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    || |||| |    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  2110 tagtgagaagatgcttatcagaggtacttgtttctttaatagtattcctttaattgctattatagata 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 259
Target Start/End: Original strand, 11792 - 11999
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| ||||| || ||||| |||||||  ||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||| || | |   ||||    
T  11792 aatgatgagaggaggcccaagaggagagatgctcctactgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatg 11891  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| |||||||||   |||||  ||||||| || ||  |||| || |||||||| ||||| |||||||| | || |||  |||||||||||||| | ||    
T  11892 agaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgacattgtttgttacatttggaacgaagaaggtcatatcag 11991  T
Q  252 ttcgcagt 259  Q
    ||||||||    
T  11992 ttcgcagt 11999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 52 - 386
Target Start/End: Original strand, 701 - 1035
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| ||||| || ||||| |||||||  ||||| || |||| ||||| |||||||||||| || ||||||||||||||||| ||  ||   ||||    
T  701 aatgatgagaggaggcccaagaggagagatgctcctacggacattgattgcttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgatagagatg 800  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| |||||||||   |||||  |||| || || ||  |||| || || ||||| || || |||||||| |  || ||  |||| ||||| ||| | ||    
T  801 agaagaagtgcttcaggtgtggtcagaagggacacacactagctgattgtaagcgtggggacattgtttgttataactgcaacgaggaaggacatatcag 900  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    ||||||||| | | | || ||||||| |  ||| ||||| ||||||||||| ||| | ||||| || |||  |||||||||| ||||||||| |||||||    
T  901 ttcgcagtgtacgcagccaaagaaggttaggactggtggtaaggtgtttgctttgaccggtacgcaaacaactaatgaggacagacttatcaaaggtact 1000  T
Q  352 tgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||||||||||| ||||||||||||||    
T  1001 tgtttctttaatagtactcccttaattgctattat 1035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 11993 - 11888
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||||||||| ||| | |||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11993 ggtggaaaggtgtttgctttgactggtacacagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 11894  T
Q  386 ttgata 391  Q
    | ||||    
T  11893 tagata 11888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 12176 - 12130
Alignment:
Q  91 gagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  12176 gagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 12130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 90 - 386
Target Start/End: Original strand, 93818 - 94114
Alignment:
Q  90 tgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacg 189  Q
    |||| ||||||| ||||| ||||||| ||||||||||||||||||||  |||| |   |||||||| || || |||  ||| ||  ||||||| |||  |    
T  93818 tgaggttgtttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtg 93917  T
Q  190 atagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcag-acaggt 288  Q
     | ||||| |||||||| || ||||||||||| || || ||||  || || |||||  |||||||||||||||   | |||||||||| |||| || ||     
T  93918 ttggcggattgcaagcgtggagatattgtttgttttaactgtggtgatgagggtcacattagttcgcagtgcactcaacctaagaagg-tcaggactgga 94016  T
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||| || ||||| ||| | ||||| || ||   ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  94017 ggaaaagtatttgctttgactggtacgcagactactaatgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 94114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 115697 - 115641
Alignment:
Q  335 gacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  115697 gacttatcagaggtacttgtttctttaatagtatccctttaattgctattatagata 115641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 9657 - 9992
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || || || |||||||  ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||  ||   |||    
T  9657 gaatgatgagaggaggccaaacaggagagatgctcctgctgatattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgtgataaggat 9756  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||||||||   |||||  ||||||| || ||  |||  || || ||||| || ||| |||||||||  || ||  | || || || ||| | |    
T  9757 gagaagaagtgcttcaggtgtggtcagaaaggacacaccctagttgattgtaagcggggagatgttgtttgctataactgcaatgaggagggccatataa 9856  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||| || || | | | || ||||||| |  ||| ||||| |||||||||||  || | ||||| || ||   || |||||| |||||||||| ||||||    
T  9857 gttcacaatgtacgcaaccgaagaaggttaggactggtggtaaggtgtttgctctgactggtacgcaaaccactagtgaggatcgacttatcaaaggtac 9956  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||||||||||||||||||||||    
T  9957 ttgtttctttaatagtactcctttaattgctattat 9992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 24119 - 24170
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  24119 atcagaggtacttgttattttgatagtacacctttagttgctattattgata 24170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 289 - 391
Target Start/End: Complemental strand, 41916 - 41814
Alignment:
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 388  Q
    |||||||||||||| ||| | ||||| || ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41916 ggaaaggtgtttgctttgactggtacgcagactcctaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 41817  T
Q  389 ata 391  Q
    |||    
T  41816 ata 41814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 42151 - 42068
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  |||  |||||||||||||||||||||||||||||| |||||||||||||||||    
T  42151 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgt 42068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 30118 - 30013
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    |||||||||||||||||||||   ||||| || ||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30118 ggtggaaaggtgtttgcattgattggtacgcagactaccaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 30019  T
Q  386 ttgata 391  Q
    ||||||    
T  30018 ttgata 30013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 30312 - 30276
Alignment:
Q  92 agattgtttgctacaagtgtggtgagaagggccacaa 128  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  30312 agattgtttgttacaagtgtggtgagaaaggccacaa 30276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 51 - 391
Target Start/End: Complemental strand, 37358 - 37018
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || ||||| |||||    |||||||| ||| |||||| ||||||||| ||||| ||||||||||||||||| ||  ||   |||    
T  37358 gaatgatgagaggaggcccaagaggagagacactcctactgatattttttgcttcaagtgtggcgagaaaggccacaagagtaatgtttgtgataaagat 37259  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||||||||   |||||  |||| || || ||  |||| || || ||| | || |||||||||||||  || ||  | || ||||||||| | |    
T  37258 gagaagaagtgcttcaggtgtggtcagaagggacacacactagctgattgtaagtgtggggatattgtttgctataactgcaatgaggaaggtcatatca 37159  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    |||| ||||| | | | || ||||||| |  ||| ||||| ||||||||| | ||| | ||||| || |||  |||||| ||| ||||||||| ||||||    
T  37158 gttcacagtgtacgcagccgaagaaggttaggactggtggtaaggtgttttctttgaccggtacgcaaacaactaatgaagacagacttatcataggtac 37059  T
Q  351 ttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  37058 ttgtttctttaatagtactcctttaattgctattatagata 37018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 757 - 1097
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || ||||| |||||||  ||||  || |||||||||| |||||||||||| || ||||||||||||||||||||  ||   |||    
T  757 gaatgatgagaggaggcccaagaggagagatgctcctatggatattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagat 856  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtca--tc- 247  Q
    ||||| |||||||||   |||||  ||||||| || ||  |||| || || ||||| ||||| ||||||||||  || ||  |||| ||||||||  ||     
T  857 gagaagaagtgcttcatgtgtggtcagaaaggacacacactagctgattgtaagcgtggtgacattgtttgctataactgcaacgaggaaggtcacatca 956  T
Q  248 --ttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcaga 345  Q
      | ||||||||||| |   | || ||||||| |  ||| ||||| ||||||||||| ||| | ||||| || |||  || | ||||| |||||||||||    
T  957 gttcagttcgcagtgtacacaaccgaagaaggttaggactggtggtaaggtgtttgctttgactggtacgcaaacaactagtaaggacagacttatcaga 1056  T
Q  346 ggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  1057 ggtacttgtttctttaataatacgcctttaattgctattat 1097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 391
Target Start/End: Original strand, 1451 - 1832
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaag 108  Q
    ||||| |||| || ||||||||||||||| || || ||| | || |||||| ||||| |||||||| |||||||  ||| ||||||||||||| ||||||    
T  1451 aagccttacagtgctcctgctgacaaaggaaagcagaagat-gagtgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaag 1549  T
Q  109 tgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcg 208  Q
    ||||||||||| || |||||||||||||| ||   |   |||||||  |||||||||   |||||  |||| || || |   |||| ||||||||||| |    
T  1550 tgtggtgagaaaggacacaagagtaatgtttgtggtaaagatgagaggaagtgcttcaggtgtggtcagaagggacacagtttagctgaatgcaagcgtg 1649  T
Q  209 gtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtg-caggaaccctaagaaggctcagacaggtggaaaggtgtttgcattgg 307  Q
    | || ||| | |||| ||| ||  | | ||| |||||| | ||||| ||||| |  |||||  ||||||| |   || || || || ||||||||||||     
T  1650 gggacattatctgctacaactgcaatggagagggtcatatcagttcacagtgtcccgaaccg-aagaaggttagaactgggggcaaagtgtttgcattga 1748  T
Q  308 caggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    | ||||| || ||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1749 ctggtacgcagactaccaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 1832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 616 - 707
Alignment:
Q  295 gtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||| | |||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  616 gtgtttgcattgactggtacacagactactaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 21259 - 21147
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    |||||||||||||| ||||| ||   ||||||||| ||||| || ||||| |||||||   || ||||||||||||||||||||||||||||||| ||||    
T  21259 cctgctgacaaaggaaaacagaggctgaatgatgagaggaggcccaagaggagagatgcttctgctgagattgtttgctacaagtgtggtgagaaaggcc 21160  T
Q  125 acaagagtaatgt 137  Q
    |||||||||||||    
T  21159 acaagagtaatgt 21147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 20957 - 20898
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20957 tgaggatctacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 20898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 394
Target Start/End: Original strand, 30431 - 30554
Alignment:
Q  271 aagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactc 370  Q
    |||||||||  ||| ||||| || |||||||||||| | ||||| || |||   |||||||||||||||||||||||||||||||||||||| |||||||    
T  30431 aagaaggctaggaccggtgggaaagtgtttgcattgactggtacgcagacaacaaatgaggaccgacttatcagaggtacttgtttctttaaaagtactc 30530  T
Q  371 ctttaattgctattattgatattg 394  Q
    |||||||||||||||| |||||||    
T  30531 ctttaattgctattatagatattg 30554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 30184 - 30296
Alignment:
Q  24 tcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaaggg 122  Q
    ||||||||||||||||||||| ||| | ||||||||| ||||| || ||||| | |||||  ||| ||||||||||||| || ||||||||||| || ||    
T  30184 tcctgctgacaaagggaaacagaagat-gaatgatgacaggaggcccaagaggaaagatgctcctgctgagattgtttgttataagtgtggtgaaaaagg 30282  T
Q  123 ccacaagagtaatg 136  Q
    ||||||||| ||||    
T  30283 ccacaagagcaatg 30296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 639 - 540
Alignment:
Q  292 aaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||| | ||||| || ||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  639 aaggtgtttgcattgactggtacgcagactaccaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 921 - 794
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaag 108  Q
    ||||| |||| || ||||||||||||||| ||  | ||||| || |||||| ||||| |||||||| |||||||  ||| ||||||||||||| ||||||    
T  921 aagccttacagtgctcctgctgacaaaggaaagtagaagtt-gattgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaag 823  T
Q  109 tgtggtgagaagggccacaagagtaatgt 137  Q
    |||||||| || ||||||||||| |||||    
T  822 tgtggtgaaaaaggccacaagagcaatgt 794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 292 - 391
Target Start/End: Original strand, 514479 - 514578
Alignment:
Q  292 aaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||| | ||||| || ||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  514479 aaggtgtttgcattgactggtacgcagactaccaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 514578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 514238 - 514324
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||| ||||| |||||||| |||||||  ||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  514238 gaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgt 514324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 89 - 391
Target Start/End: Complemental strand, 5469 - 5167
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatac 188  Q
    ||||| |||||||||||   ||||||| ||| ||||||||||||||||  || | ||  |||| |||| |||| ||||  ||||| ||||||||||||||    
T  5469 ctgaggttgtttgctacccttgtggtgtgaaaggccacaagagtaatgcttgtactggggatgtgaaacagtgtttccgttgtggtaagaaagggcatac 5370  T
Q  189 gatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggt 288  Q
     ||  | ||||| ||||  | |||| | || || ||||| ||  | |||||||||||| || |||||||||||| ||| |||||||||||||| ||  ||    
T  5369 tattacagaatgtaagcatgatgatgtggtgtgtttcaaatgcaatgaagaaggtcatattggttcgcagtgcaagaagcctaagaaggctcaaactagt 5270  T
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattg 388  Q
    || || |||||||| ||| | ||||| || ||| | ||| |||||||  | || |||||||| |||| |||| ||||||||| |||||||||||||||||    
T  5269 gggaaagtgtttgctttgactggtacgcagacattgaataaggaccggttgattagaggtacatgttactttgatagtactcttttaattgctattattg 5170  T
Q  389 ata 391  Q
    |||    
T  5169 ata 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 25 - 391
Target Start/End: Complemental strand, 22567 - 22201
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||| |||||||| || |||||   ||||||||| ||||| || || || |||||||  |||  |||||| ||||| ||||||||||| ||||| ||||    
T  22567 cctgccgacaaaggaaatcaaagactgaatgatgagaggaggcccaataggagagatgctcctgttgagatcgtttgttacaagtgtggcgagaaaggcc 22468  T
Q  125 acaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgctt 224  Q
    ||||||||||||| |  | |   |||||||| || |||||| | |||||  ||||||| || ||  |||  || |||||||| |||||| |||||||||     
T  22467 acaagagtaatgtttttactaaggatgagaagaaatgcttcaagtgtggtcagaaaggacacaccctagttgattgcaagcgtggtgatgttgtttgcta 22368  T
Q  225 caattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtt 324  Q
     || ||  | ||||| || ||| | ||||| |||||||   | || ||||||| |   || | ||| |  |||||||||||| | ||||| || ||   |    
T  22367 taactgcaatgaagagggccatatcagttctcagtgcacacagccgaagaaggttagaaccgttggtatagtgtttgcattgactggtactcagactact 22268  T
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  22267 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattggtattatagata 22201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 1616 - 1707
Alignment:
Q  295 gtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||| | ||||| || ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1616 gtgtttgcattgactggtacgcagactactaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 1707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 1331 - 1457
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagt 109  Q
    ||||| |||| || |||||||||||| || ||||| |    ||||||||| ||||| || ||||| |||||||  ||| |||||||||| || |||||||    
T  1331 aagccttacagtgctcctgctgacaagggaaaacagaaaatgaatgatgataggaggcccaagaggagagatgctcctgctgagattgtctgttacaagt 1430  T
Q  110 gtggtgagaagggccacaagagtaatg 136  Q
    ||||||| || ||||||||||| ||||    
T  1431 gtggtgaaaaaggccacaagagcaatg 1457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 324 - 391
Target Start/End: Original strand, 13 - 80
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 80  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 8906 - 9241
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || ||||| |||||||   || || ||||||||||||||||||||||||||||  |||||||||||||||||||  ||   |||    
T  8906 gaatgatgagaggaggcccaagaggagagatgcttctgctaagattgtttgctacaagtgtggtgagaaaagccacaagagtaatgtctgtgataaggat 9005  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| |||||||||   |||||  ||||||| || ||  ||||  | || ||||| || ||| |||||||||  || ||  | || ||||||||  | |    
T  9006 gagaagaagtgcttcaggtgtggtcagaaaggacacacattagctaattgtaagcggggagatgttgtttgctataactgcaatgaggaaggtcaaatca 9105  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
     ||||||||| |   |  | ||||||| |  ||| ||||| || ||||||||  || | ||||| || ||   || |||||| |||||||||||||||||    
T  9106 attcgcagtgtacacaaacgaagaaggttaggaccggtggtaatgtgtttgctctgactggtacgcaaaccactagtgaggatcgacttatcagaggtac 9205  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||||||||||||||||||||||    
T  9206 ttgtttctttaatagtactcctttaattgctattat 9241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 51 - 346
Target Start/End: Complemental strand, 17056 - 16761
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| |||||||| |||||||  |||||||||||| |||| | ||||||||| ||||| ||||||||||||||||| ||  ||   |||    
T  17056 gaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgtttcaagtgtggagagaaaggccacaagagtaatgtgtgtgatcgagat 16957  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||||||    |||||  ||||||| || ||  | || || |||||||| || ||||||||||||| ||| ||| | || ||||| ||| |||    
T  16956 gagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtggggatattgtttgctacaactgtaatgaggaaggacatatta 16857  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagag 346  Q
    |||||||||| | | |  ||||||||| |  ||||||||| ||||| ||| | ||| | ||||  || || || ||||||||||||||||||||||    
T  16856 gttcgcagtgtacgcagactaagaaggttaggacaggtggcaaggtattttcgttgtctggtatgcaaactgtgaatgaggaccgacttatcagag 16761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 25 - 344
Target Start/End: Original strand, 62631 - 62950
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || || || || | ||||||||| ||||| |||||||| |||||||  |||||||| |||||||  | ||||||||||||||| ||||    
T  62631 cctgctgacaagggtaagcagagattgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttaattcaagtgtggtgagaaaggcc 62730  T
Q  125 acaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgctt 224  Q
    ||||||||||||| ||  |   ||||||||| ||||||||    |||||  ||||||  || ||  |||| || || ||||| || ||| |||||| ||     
T  62731 acaagagtaatgtatgtgaccatgatgagaagaagtgctttaggtgtggtcagaaagtacacactttagctgattgtaagcgtggggatgttgttttcta 62830  T
Q  225 caattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagtt 324  Q
    ||| ||| | ||| |||||||| | ||||||||||| | | | |||||||| | |  ||||||||| || |||||||| ||| | ||||| || |||||     
T  62831 caactgtaatgaataaggtcatatcagttcgcagtgtacgcagcctaagaaagttaggacaggtggcaaagtgtttgctttgactggtacgcaaacagtg 62930  T
Q  325 aatgaggaccgacttatcag 344  Q
    ||||||||||||||||||||    
T  62931 aatgaggaccgacttatcag 62950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 89 - 386
Target Start/End: Original strand, 65221 - 65518
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtgggaagaaagggcatac 188  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||||| || |     ||||||||||||||||||   |||||  ||||||| || ||    
T  65221 ctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaaaaagtgcttcaggtgtggtcagaaaggacacac 65320  T
Q  189 gatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggt 288  Q
    | | ||  | || ||| | || ||| ||||||| |  |||||||| || ||||| ||  | ||||| |||||||   | || ||||||| |  ||| |||    
T  65321 gttggctaattgtaagagaggagatgttgtttgttataattgtgatgaggaaggccacatcagttcacagtgcacccagccaaagaaggttaggaccggt 65420  T
Q  289 ggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||| |||| ||||||| | ||||| || ||    ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  65421 ggaaaagtgtatgcattgactggtacgcagactaccaatgaggacaggcttatcagaggtacttgtttctttaatagtacacctttaattgctattat 65518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 52 - 391
Target Start/End: Complemental strand, 6223 - 5884
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatg 151  Q
    |||||||| ||||| || ||||| |||||||  | |||||| |||||||||| |||||||||||| || ||||||||||||||||||||  ||   ||||    
T  6223 aatgatgagaggaggcccaagaggagagatgctcttactgacattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatg 6124  T
Q  152 agaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttag 251  Q
    |||| |||||||||  ||||||  ||||||| || ||  |||| || |||||||| || || |||||||| |  || ||  |||| ||||| ||| ||||    
T  6123 agaagaagtgcttcagatgtggtcagaaaggacacacactagctgattgcaagcgtggggacattgtttgttataactgcaacgaggaaggacatattag 6024  T
Q  252 ttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtact 351  Q
    ||| ||||| |   | || ||||||| |  ||| ||||| || ||||||||  |  | | ||| || ||   ||  |||||| | |||||||||||||||    
T  6023 ttcacagtgtacacaaccgaagaaggttaggaccggtggtaaagtgtttgctctaactgatacgcaaaccactagcgaggacaggcttatcagaggtact 5924  T
Q  352 tgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  5923 tgtttctttaatagtactcctttaattgttattatagata 5884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 41210 - 41333
Alignment:
Q  268 cctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagta 367  Q
    |||||||| |||||| |  |||| | ||||||||| || || ||||| || ||||  |||||||| |  || ||||||||||| |||| | |||||||||    
T  41210 cctaagaaagctcagtctagtgggatggtgtttgctttagctggtactcagacagcgaatgaggatcatctgatcagaggtacatgttacattaatagta 41309  T
Q  368 ctcctttaattgctattattgata 391  Q
    |||| |||||| ||||||| ||||    
T  41310 ctcccttaattactattatagata 41333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 67267 - 67333
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  67267 aatgaggaccgactcatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 67333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 66993 - 67079
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||| |||||||| ||||| |||||||  ||| | ||||||||||| || ||||||||||| || ||||||||||| |||||    
T  66993 gaatgatgataggagacccaagaggagagatgctccttccgagattgtttgttataagtgtggtgaaaaaggccacaagagcaatgt 67079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 6377 - 6477
Alignment:
Q  286 ggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctatta 385  Q
    ||||||||||| ||||| ||| | |||||||| ||   |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6377 ggtggaaaggtatttgctttgactggtacacagactactaatgaggaccgtcttatcagaggtacttgtttctataatagtactcctttaattgctatta 6476  T
Q  386 t 386  Q
    |    
T  6477 t 6477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 271 - 391
Target Start/End: Original strand, 5250 - 5370
Alignment:
Q  271 aagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactc 370  Q
    |||||||||  ||| ||||| || |||||||||||| | ||||| || ||    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5250 aagaaggctaggaccggtgggaaagtgtttgcattgactggtacgcagactacaaatgaggaccgacttatcagaggtacttgtttctttaatagtactc 5349  T
Q  371 ctttaattgctattattgata 391  Q
     ||||||||||||||| ||||    
T  5350 atttaattgctattatagata 5370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 5003 - 5107
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||||||||| || ||   ||||||||| ||||| || ||||| |||||||  ||| |||| |||||||| || ||| ||| ||| || |||    
T  5003 tcctgctgacaaagggaagcagaggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgtttgttaaaagagtgatgaaaaaggc 5102  T
Q  124 cacaa 128  Q
    |||||    
T  5103 cacaa 5107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 386
Target Start/End: Original strand, 763 - 1074
Alignment:
Q  75 aagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttccaatgtggg 174  Q
    ||||||||  ||| ||||||||||||| |||||||||||  |||| ||||| ||||||||||| || | |   |||||||| |||||||||   |||||     
T  763 aagagatgctcctgctgagattgtttgttacaagtgtggcaagaaaggccataagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggt 862  T
Q  175 aagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaaga 274  Q
     ||||||| || ||  |||| || |||||||| |||||||||||||| |  || ||  | ||||| |||||| | ||||| ||||| | | | || | ||    
T  863 cagaaaggacacactctagctgattgcaagcgtggtgatattgtttgttataactgcaatgaagagggtcatatcagttcacagtgtacgcaaccgagga 962  T
Q  275 aggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactccttt 374  Q
    ||| |   || ||||| || |||||||| ||| | ||||  || ||   || |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  963 aggttagaaccggtggtaaagtgtttgctttgactggtatgcaaaccactagtgaggatcgaattatcagaggtacttgtttctttaatagtactccttt 1062  T
Q  375 aattgctattat 386  Q
    ||||||||||||    
T  1063 aattgctattat 1074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 164562 - 164621
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  164562 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 164621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 164260 - 164372
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || ||||| || | ||||||||| ||||| || || || ||||| |  ||| ||||||| ||||| ||||||||||| ||||| ||||    
T  164260 cctgctgacaagggaaaacagaggttgaatgatgagaggaggcccaataggagagacgctcctgctgagatcgtttgttacaagtgtggcgagaaaggcc 164359  T
Q  125 acaagagtaatgt 137  Q
    |||||||||||||    
T  164360 acaagagtaatgt 164372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 390
Target Start/End: Original strand, 47155 - 47207
Alignment:
Q  338 ttatcagaggtacttgtttctttaatagtactcctttaattgctattattgat 390  Q
    ||||||||||||||||||  ||||||||||| |||||| || |||||||||||    
T  47155 ttatcagaggtacttgttattttaatagtacacctttagttactattattgat 47207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 397
Target Start/End: Original strand, 13548 - 13710
Alignment:
Q  235 gaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggacc 334  Q
    |||||||||||| || | || || |||| ||| ||||||||| |||||||  |||| |  |||||||| ||| | |||||||| ||||  |||||||| |    
T  13548 gaagaaggtcatattgggtcacaatgcaagaaacctaagaagactcagactagtggtagagtgtttgctttgactggtacacaaacagagaatgaggatc 13647  T
Q  335 gacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattgatg 397  Q
    |  | ||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  13648 gtttgatcagaggtacatgttactttgatagtactcctttaattgctattattgatattgatg 13710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 13395 - 13444
Alignment:
Q  87 tactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  13395 tactgagattgtttgctacacttgtggtgagaaaggccataagagtaatg 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 53581 - 53643
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53581 taatgaggaccaacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 53643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 53282 - 53394
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || || || || | ||||||||| ||||| || || || |||||||  | | ||| ||| ||||| ||||||||||| ||||| ||||    
T  53282 cctgctgacaagggaaagcagagattgaatgatgagaggaggcccaataggagagatgctcttgctgggatcgtttgttacaagtgtggcgagaaaggcc 53381  T
Q  125 acaagagtaatgt 137  Q
    |||||||||||||    
T  53382 acaagagtaatgt 53394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 3077 - 2964
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| || | ||||||||| ||||| || ||||| |||||||  |||  ||||||||||||||||||||||||| |||| |||    
T  3077 tcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtaagaaaggc 2978  T
Q  124 cacaagagtaatgt 137  Q
    ||||||||||||||    
T  2977 cacaagagtaatgt 2964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 950 - 834
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||| || || || || | ||||||||| ||||| |||||||| |||||||  ||| |||||||||||||||||||||||||  |||| |||    
T  950 tcctgctgacaagggtaagcagagattgaatgatgagaggaggcctaagaggagagatgctcctgctgagattgtttgctacaagtgtggctagaaaggc 851  T
Q  124 cacaagagtaatgtctg 140  Q
    |||||||||||||||||    
T  850 cacaagagtaatgtctg 834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 391
Target Start/End: Complemental strand, 724 - 662
Alignment:
Q  329 aggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  724 aggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 5370 - 5429
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5370 tgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 5429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 5067 - 5208
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||| || || |||||   |||| |||| ||| | |||| ||| |||||||  ||| ||||||||||||||||||||||||| || || |||    
T  5067 tcctgctgacaagggaaagcaaaggctgaataatgagaggtggcctaggaggagagatgctcctgctgagattgtttgctacaagtgtggcgaaaaaggc 5166  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttc 165  Q
    |||||||||||||||||  ||   |||||||| |||||||||    
T  5167 cacaagagtaatgtctgtgataaggatgagaagaagtgcttc 5208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 235 - 394
Target Start/End: Complemental strand, 15645 - 15486
Alignment:
Q  235 gaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggacc 334  Q
    |||||||||||| || ||||| | || | ||| |||||||||||||||||   |||||  || ||||| ||| | ||||| || ||||  |||||||| |    
T  15645 gaagaaggtcatattggttcgtaatgtaagaagcctaagaaggctcagactactggaagagtttttgctttgactggtacgcaaacagagaatgaggatc 15546  T
Q  335 gacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    || | ||||||||||| |||| |||| |||||||||||||||||||||||||||||||||    
T  15545 gattgatcagaggtacatgttactttgatagtactcctttaattgctattattgatattg 15486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 15791 - 15744
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  15791 ctgagattgtttgctacacttgtggtgagaaaggccataagagtaatg 15744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 8347 - 8682
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| |||||||| ||||| |||||||  | |  ||| |||||||| || |||||||| ||||| ||||||||||||||||| || | |   |||    
T  8347 gaatgatgagaggagacccaagaggagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtactaaggat 8446  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||| |||   |||||  |||| || || ||  |||| || |||||||| |||||  ||||||| |  || ||  | ||| | || ||| | |    
T  8447 gagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtggtgacgttgtttgttataactgcaatgaatagggccatatca 8546  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    ||||||||||||   | || ||||||| |   || ||||| || |||||||||||| | ||||| || ||   || |||||| |||||||||||||||||    
T  8547 gttcgcagtgcaatcaaccgaagaaggttagaaccggtgggaaagtgtttgcattgactggtacgcagactactagtgaggatcgacttatcagaggtac 8646  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||| ||||||||||||||||||    
T  8647 ttgtttctttaatagtaatcctttaattgctattat 8682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 51 - 386
Target Start/End: Original strand, 18561 - 18896
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| |||||||| ||||| |||||||  | |  ||| |||||||| || |||||||| ||||| ||||||||||||||||| || | |   |||    
T  18561 gaatgatgagaggagacccaagaggagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtactaaggat 18660  T
Q  151 gagaaaaagtgcttccaatgtgggaagaaagggcatacgatagcggaatgcaagcgcggtgatattgtttgcttcaattgtgacgaagaaggtcatctta 250  Q
    ||||| ||||| |||   |||||  |||| || || ||  |||| || |||||||| |||||  ||||||| |  || ||  | ||| | || ||| | |    
T  18661 gagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtggtgacgttgtttgttataactgcaatgaatagggccatatca 18760  T
Q  251 gttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtac 350  Q
    ||||||||||||   | || ||||||| |   || ||||| || |||||||||||| | ||||| || ||   || |||||| |||||||||||||||||    
T  18761 gttcgcagtgcaatcaaccgaagaaggttagaaccggtgggaaagtgtttgcattgactggtacgcagactactagtgaggatcgacttatcagaggtac 18860  T
Q  351 ttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||| ||||||||||||||||||    
T  18861 ttgtttctttaatagtaatcctttaattgctattat 18896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 391
Target Start/End: Complemental strand, 15269 - 15202
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  15269 taatgaggatcgacttatcagaggtacttgtttcttttatagtactcctttaattgctattatagata 15202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 397
Target Start/End: Complemental strand, 6348 - 6186
Alignment:
Q  235 gaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggacc 334  Q
    |||||||||||| || | ||||| |||| ||| ||||||||| |||||||  ||||||  |||||||  ||| | ||||| || ||||  |||||||| |    
T  6348 gaagaaggtcatattgggtcgcaatgcaagaaacctaagaagactcagactagtggaagagtgtttggtttgactggtacgcaaacagagaatgaggatc 6249  T
Q  335 gacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgatattgatg 397  Q
    |  | || |||||||| |||| |||| |||||||||||||||||||||||||||||| |||||    
T  6248 gtttgattagaggtacatgttactttgatagtactcctttaattgctattattgatactgatg 6186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 15490 - 15405
Alignment:
Q  52 aatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||||| ||||| || || || |||||||  ||| |||||||| | ||||| |||||||| ||||| |||||||||||||||||    
T  15490 aatgatgagaggaggcccaataggagagatgctcctgctgagattttctgctataagtgtggcgagaaaggccacaagagtaatgt 15405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 327 - 386
Target Start/End: Complemental strand, 54190 - 54131
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54190 tgaggatcgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 54131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 54493 - 54380
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    |||||||||||||||||| || || | ||||||||| ||||| || || ||| || |||  | | ||||||| ||||| ||||||||||| ||||| |||    
T  54493 tcctgctgacaaagggaagcagaggttgaatgatgagaggaggcccaatagatgaaatgctcttgctgagatcgtttgttacaagtgtggcgagaaaggc 54394  T
Q  124 cacaagagtaatgt 137  Q
    ||||||||||||||    
T  54393 cacaagagtaatgt 54380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 324 - 391
Target Start/End: Complemental strand, 251768 - 251701
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  251768 taatgaggaccggcttatcagaggtacttgtttctttaatagtacttctttaattgctattatagata 251701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 962 - 1020
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctat 383  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  962 aatgaggaccaacttatcagaggtacttgtttctttaatagtactcctttaattgctat 1020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 688 - 774
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||| ||||| |||||||| |||||||  ||| ||||||||||||| ||||||| ||||||||| ||||||||||| |||||    
T  688 gaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtttggtgagaaaggccacaagagcaatgt 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 1 - 59
Alignment:
Q  333 ccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1 ccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 59  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 17642 - 17704
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17642 taatgaggatcgtcttatcagaggtacttgtttctttaatagtactcctttaattgctattat 17704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 5007 - 5069
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  5007 taatgaggaccgtcttatcagaggtacttgtttctttaatactactcctttaattgatattat 5069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 17343 - 17455
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || ||||||||   ||||||||| ||||| || || || |||||||  ||| ||||||| ||||| || |||||||| ||||| ||||    
T  17343 cctgctgacaagggaaaacaaagactgaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttataagtgtggcgagaaaggcc 17442  T
Q  125 acaagagtaatgt 137  Q
    |||||||||||||    
T  17443 acaagagtaatgt 17455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 54; Significance: 7e-22; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 40203 - 40142
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40203 aatgaggaccgtcttattagaggtacttgtttctttaatagtactcctttaattgctattat 40142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 40503 - 40391
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggcc 124  Q
    ||||||||||| || || |||||   ||||||||| ||||| || || || |||||||  ||| ||||||| || || || |||||||| ||||| ||||    
T  40503 cctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctgctgagatagtctgttataagtgtggcgagaaaggcc 40404  T
Q  125 acaagagtaatgt 137  Q
    |||||||||||||    
T  40403 acaagagtaatgt 40391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 17493 - 17574
Alignment:
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||| ||||  |||||||| ||  | ||||||||||||||||   |||||| ||| |||||| |||||||||||||||    
T  17493 ggtacacagacagaaaatgaggatcgcttgatcagaggtacttgttatattaataatacacctttagttgctattattgata 17574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 1148 - 1275
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaaca-aagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaag 108  Q
    ||||| |||| || ||||||||||||||| || || ||| | ||||||||| |||||||| ||||| |||||||  ||| ||||||||||||| ||||||    
T  1148 aagccttacagtgctcctgctgacaaaggaaagcagaagat-gaatgatgataggagacccaagaggagagatgctcctgctgagattgtttgttacaag 1246  T
Q  109 tgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||||| ||||||||||| |||||    
T  1247 tgtggtgagaaaggccacaagagcaatgt 1275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 2009 - 2068
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2009 tgaggacaggcttatcagaggtacttgtttctttaatagtactcctttaattgctattat 2068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 9388 - 9447
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9388 tgaggatcgacttatcagaggtacttgtttcattaatagtactcctttaattgctattat 9447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 386
Target Start/End: Complemental strand, 263409 - 263310
Alignment:
Q  287 gtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||| |||||||| ||| | ||||| || ||   |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  263409 gtggaaaagtgtttgctttgactggtacgcagactactaatgaggacaggcttattagaggtacttgtttctttaatagtactcctttaattgctattat 263310  T

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Target: scaffold0003 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 386
Target Start/End: Complemental strand, 203564 - 203465
Alignment:
Q  287 gtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||| |||||||| ||| | ||||| || ||   |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  203564 gtggaaaagtgtttgctttgactggtacgcagactactaatgaggacaggcttattagaggtacttgtttctttaatagtactcctttaattgctattat 203465  T

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Target: scaffold0476 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 324 - 386
Target Start/End: Original strand, 703 - 765
Alignment:
Q  324 taatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  703 taatgaggacaagcttatcagaggtacttgtttctttaatagtactcctttaattgctattat 765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 430 - 516
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||| || ||||| ||||| |||||||  ||||||||||| |||||||  |||||||| ||||| |||||||| ||||||||    
T  430 gaatgatgagagaagacccaagaggagagatgctcctactgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgt 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 394
Target Start/End: Complemental strand, 10916 - 10862
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgatattg 394  Q
    ||||||||||||||||  ||| ||||||| |||||| ||||||||||||||||||    
T  10916 atcagaggtacttgttattttgatagtacacctttagttgctattattgatattg 10862  T

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Target: scaffold0167 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 1253 - 1199
Alignment:
Q  337 cttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1253 cttatcagaggtacttgtttctttaatagtactcctttaattgctattatagata 1199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 165
Target Start/End: Complemental strand, 5499 - 5358
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||| || || ||||| || | ||||||||| ||||| || | ||| |||||||  ||| |||||||||||||||||||||| || ||||| |||    
T  5499 tcctgctgataagggaaaacagaggttgaatgatgagaggaggcccacgaggagagatgctcctgctgagattgtttgctacaagtgcggcgagaaaggc 5400  T
Q  124 cacaagagtaatgtctgcaatgttgatgagaaaaagtgcttc 165  Q
    |||| ||||||||||||  ||   |||||||| |||||||||    
T  5399 cacaggagtaatgtctgtgataaagatgagaagaagtgcttc 5358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 9957 - 10006
Alignment:
Q  337 cttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9957 cttatcagaggtacttgtttctttaatagtactcctttaattgctattat 10006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 126 - 283
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    ||||||| || |||| |||||||||||| || || || || |  |||||||| ||||| || ||||| ||||| |  |||||||| |||||||||| |||    
T  126 cgaagccgtaaaatgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaagagcagagaggctcctactgatattgtttgcttcaa 225  T
Q  108 gtgtggtgagaagggccacaagagtaatgtctgcaatgttgatgagaaaaagtgcttc 165  Q
    |||||| ||||| ||||||||||||||||||||  ||   |||||||| |||||||||    
T  226 gtgtggcgagaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttc 283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 4295 - 4424
Alignment:
Q  8 cgaagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaa 107  Q
    ||||||| |||| || |||||||||||| || || || ||||  |||||||| ||||| || ||||| |||||||  |||||||| |||||||||| |||    
T  4295 cgaagccgtacactgctcctgctgacaagggtaagcagagtttaaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgcttcaa 4394  T
Q  108 gtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| ||||| |||||||||||    
T  4395 gtgtggcgagaaaggccaaaagagtaatgt 4424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 24489 - 24385
Alignment:
Q  287 gtggaaaggtgtttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    |||| ||||||||||| || |||||||| || | ||  |||||||| |  || || |||||||| |||||| ||||||||||||| |||||| |||||||    
T  24489 gtgggaaggtgtttgctttagcaggtactcagaaagcgaatgaggatcatctgataagaggtacatgtttcattaatagtactcccttaattactattat 24390  T
Q  387 tgata 391  Q
     ||||    
T  24389 agata 24385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 17240 - 17291
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||   |||||| |||||||||| |||||||||||||||    
T  17240 atcagaggtacttgttatattaataatactcctttagttgctattattgata 17291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 1422 - 1364
Alignment:
Q  328 gaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattat 386  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  1422 gaggatcgacttatcagaggtacttgtttcttgaatagtactcctttaatagctattat 1364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 19130 - 19194
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  19130 tgaggacaggcttatcagaggtgcttgtttctttaatagtactcctttaattactattatagata 19194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 391
Target Start/End: Complemental strand, 151710 - 151646
Alignment:
Q  327 tgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||| | ||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  151710 tgaggacaggcttattagaggtatttgtttctttaatagtactcctttaattgctattatagata 151646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 165
Target Start/End: Complemental strand, 153911 - 153797
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgcaatgttgat 150  Q
    ||||||||| ||||| || ||||| |||||||  || |||||||||||||||| |||||||||||| ||  |||| ||||||||||||||  ||   |||    
T  153911 gaatgatgagaggaggcccaagaggagagatgctcccactgagattgtttgcttcaagtgtggtgaaaaaagccataagagtaatgtctgtgatagagat 153812  T
Q  151 gagaaaaagtgcttc 165  Q
    ||||| |||||||||    
T  153811 gagaagaagtgcttc 153797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 23377 - 23503
Alignment:
Q  10 aagccctacaatggtcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagt 109  Q
    ||||| |||| || ||||||||| || || |||||||| | ||||||||| ||||| ||||  |  | ||||||   | ||||||||||||||||||  |    
T  23377 aagccttacagtgctcctgctgataagggaaaacaaagattgaatgatgagaggaggcctagaaataaagatgttgttgctgagattgtttgctacactt 23476  T
Q  110 gtggtgagaagggccacaagagtaatg 136  Q
    |||||||||| ||||| ||||||||||    
T  23477 gtggtgagaaaggccataagagtaatg 23503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 23811 - 23894
Alignment:
Q  54 tgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    |||||| ||||| || ||||| |||||||  |||  |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  23811 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgatacaagtgtggtgagaaaggccacaagagtaatgt 23894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 12502 - 12573
Alignment:
Q  320 cagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||| || |||||| ||||    
T  12502 cagtgaatgaggaccgacttatcaaagctacttgtttctttcatagtactcctttaaatgttattatagata 12573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 20682 - 20753
Alignment:
Q  320 cagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||| || |||||| ||||    
T  20682 cagtgaatgaggaccgacttatcaaagctacttgtttctttcatagtactcctttaaatgttattatagata 20753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 5787 - 5873
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||| ||||| || ||||| |||||||  |||||||| |||||||  |||||||||||||| || |||||||||||||||||    
T  5787 gaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttattacaagtgtggtgaaaaaggccacaagagtaatgt 5873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 391
Target Start/End: Complemental strand, 11263 - 11107
Alignment:
Q  235 gaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggacc 334  Q
    |||||||||||| | |||||||| |||| ||| ||||||||||||||||    ||| |  |||||||| ||| | ||||| || ||||  |||||||| |    
T  11263 gaagaaggtcatatcagttcgcaatgcaagaaacctaagaaggctcagaatactggtagagtgtttgctttgactggtacgcaaacagagaatgaggatc 11164  T
Q  335 gacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |  | || |||||||| |||| |||| ||||||||| |||||||| |||||||||||    
T  11163 gtttgattagaggtacatgttactttgatagtactcatttaattgttattattgata 11107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 391
Target Start/End: Original strand, 216489 - 216645
Alignment:
Q  235 gaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgcattggcaggtacacatacagttaatgaggacc 334  Q
    |||||||||||| || | ||||| |||| ||| ||||||||||| |||||   ||| |  || ||||| ||| | ||||| || ||||  |||||||| |    
T  216489 gaagaaggtcatattgggtcgcaatgcaagaagcctaagaaggcgcagactactgggagagtttttgctttgactggtacgcagacagagaatgaggatc 216588  T
Q  335 gacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
     | | ||||||||||| |||| |||| |||||||| |||||||||||||||||||||    
T  216589 aattgatcagaggtacatgttactttgatagtactactttaattgctattattgata 216645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 216343 - 216390
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  216343 ctgagattgtttgctacacttgtggtgagaaaggccataagagtaatg 216390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 391
Target Start/End: Complemental strand, 2144 - 2078
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||| || || ||||||||||| |||||| |||||||||||||||||||| ||||||| ||||    
T  2144 aatgaggatcgtctaatcagaggtacatgtttcattaatagtactcctttaattactattatagata 2078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 116043 - 115957
Alignment:
Q  51 gaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||| ||||| |||||||| || ||||  |||||||| |||||||| | || ||||||||| || |||||||||||||||||    
T  116043 gaatgatgagaggaggcctaagaggagggatgctcctactgatattgtttgtttcatgtgtggtgaaaaaggccacaagagtaatgt 115957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 110727 - 110689
Alignment:
Q  353 gtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  110727 gtttctttaatagtactcctttaattgctgttatagata 110689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 9271 - 9321
Alignment:
Q  86 ctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  9271 ctactgagattgtttgctatacttgtggtgagaagggccacaagagtaatg 9321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 23457 - 23523
Alignment:
Q  325 aatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||| ||| | ||||||||||| ||||  ||| |||||||||||||| |||||||||||||||    
T  23457 aatgaggatcgattaatcagaggtacgtgttattttgatagtactcctttagttgctattattgata 23523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 18005 - 17957
Alignment:
Q  343 agaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  18005 agaggtacatgttactttgatagtactcctttaattgctattattgata 17957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 18226 - 18179
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    ||||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  18226 ctgagattgtttgctacacttgtggtgagaaaggccataagagtaatg 18179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 111081 - 111132
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||| ||||  ||||||||||| |||||| |||||||||||||||    
T  111081 atcagaggtacatgttattttaatagtacacctttagttgctattattgata 111132  T

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Target: scaffold1600 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 452 - 405
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||    
T  452 ctgagattgtttgctatacttgtggtgagaagggccacaagagtaatg 405  T

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Target: scaffold0679 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 1092 - 1159
Alignment:
Q  235 gaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||| || || ||||| ||||| |||||    
T  1092 gaagaaggtcatattagttcgcagtgcaagaagcctaagaaggcccaaactggtgggaaggtttttgc 1159  T

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Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 33230 - 33337
Alignment:
Q  24 tcctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaagggc 123  Q
    ||||||||||||||| ||||| ||   ||||||||| ||||| || ||||| |||||||  |||  ||| |||||||| | |||||||||||| || |||    
T  33230 tcctgctgacaaaggaaaacagaggatgaatgatgagaggaggcccaagaggagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaaaaggc 33329  T
Q  124 cacaagag 131  Q
    ||||||||    
T  33330 cacaagag 33337  T

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Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 25703 - 25640
Alignment:
Q  239 aaggtcatcttagttcgcagtgcaggaaccctaagaaggctcagacaggtggaaaggtgtttgc 302  Q
    |||||||| ||||||||||||||| ||| ||||||||||| ||||| ||||| ||||| |||||    
T  25703 aaggtcatattagttcgcagtgcaagaagcctaagaaggcccagactggtgggaaggtttttgc 25640  T

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Target: scaffold0490 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 3310 - 3216
Alignment:
Q  25 cctgctgacaaagggaaacaaagttagaatgatgaaaggagacctaagagaagagatgtgcctactgagattgtttgctacaagtgtggtgagaa 119  Q
    ||||||||||| || || || || | ||||||||| ||||| || ||||| |||||||  |||||||||||| |||||| ||||||||| |||||    
T  3310 cctgctgacaagggtaagcagagattgaatgatgagaggaggcccaagaggagagatgctcctactgagattatttgcttcaagtgtggggagaa 3216  T

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Target: scaffold0621 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 147 - 96
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  147 atcagaggtacttgttattttgatagtacacctttagttgctattattgata 96  T

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Target: scaffold0621; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 4564 - 4513
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  4564 atcagaggtacttgttattttgatagtacacctttagttgctattattgata 4513  T

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Target: scaffold0550 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 10332 - 10383
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||   |||||| |||||||||| |||||||||||||||    
T  10332 atcagaggtacttgttatattaataatactcctttagttgctattattgata 10383  T

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Target: scaffold0207 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 7913 - 7964
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  7913 atcagaggtacttgttattttgatagtacacctttagttgctattattgata 7964  T

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Target: scaffold0181 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 29102 - 29153
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||   |||||| |||||||||| |||||||||||||||    
T  29102 atcagaggtacttgttatattaataatactcctttagttgctattattgata 29153  T

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Target: scaffold0120 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 11394 - 11343
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  11394 atcagaggtacttgttattttgatagtacacctttagttgctattattgata 11343  T

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Target: scaffold0079 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Complemental strand, 36628 - 36577
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||   |||||| |||||||||| |||||||||||||||    
T  36628 atcagaggtacttgttatattaataatactcctttagttgctattattgata 36577  T

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Target: scaffold0075 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 55644 - 55695
Alignment:
Q  340 atcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||||||||||||||  ||| ||||||| |||||| |||||||||||||||    
T  55644 atcagaggtacttgttattttgatagtacacctttagttgctattattgata 55695  T

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Target: scaffold0324 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 2381 - 2323
Alignment:
Q  78 agatgtgcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 136  Q
    |||||| |||||||||||||| ||||| |  ||||||||||| ||||||||||| ||||    
T  2381 agatgttcctactgagattgtgtgctatacttgtggtgagaaaggccacaagagcaatg 2323  T

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Target: scaffold1459 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 1176 - 1257
Alignment:
Q  310 ggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||| ||||  |||||||| |  || |||||||| |||||||   |||||| |||||||||| |||||||||||||||    
T  1176 ggtacacagacagagaatgaggatctcctaatcagaggaacttgttatattaataatactcctttagttgctattattgata 1257  T

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Target: scaffold0412 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 15711 - 15804
Alignment:
Q  298 tttgcattggcaggtacacatacagttaatgaggaccgacttatcagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    ||||| ||||| |||||||| || |  |||||||| ||  | ||||||||||||||||   |||||| |||||||||| |||| ||||||||||    
T  15711 tttgctttggctggtacacagaccgagaatgaggatcgcttgatcagaggtacttgttatattaataatactcctttagttgcaattattgata 15804  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 18065 - 18016
Alignment:
Q  342 cagaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||| |   |||||| ||||||||||||||||||||||||||    
T  18065 cagaggtacttgctatattaataatactcctttaattgctattattgata 18016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 104606 - 104561
Alignment:
Q  90 tgagattgtttgctacaagtgtggtgagaagggccacaagagtaat 135  Q
    ||||||||||||||| |  ||||||||||| |||||||||||||||    
T  104606 tgagattgtttgctatacttgtggtgagaaaggccacaagagtaat 104561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 374 - 306
Alignment:
Q  210 tgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaaccctaagaaggc 278  Q
    ||||||||| |||||||||||  | ||||| |||||| ||||||| ||||||| | | |||||||||||    
T  374 tgatattgtgtgcttcaattgcaaagaagagggtcatattagttctcagtgcaagcagcctaagaaggc 306  T

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Target: scaffold0410 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 268 - 220
Alignment:
Q  343 agaggtacttgtttctttaatagtactcctttaattgctattattgata 391  Q
    |||||||||||||   |||||| |||||||||| |||||||||||||||    
T  268 agaggtacttgttatattaataatactcctttagttgctattattgata 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 139533 - 139581
Alignment:
Q  89 ctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgt 137  Q
    ||||||||  ||||| ||| ||||||||||| |||||||||||||||||    
T  139533 ctgagattacttgcttcaattgtggtgagaaaggccacaagagtaatgt 139581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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