View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9889_low_29 (Length: 251)

Name: NF9889_low_29
Description: NF9889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9889_low_29
NF9889_low_29
[»] chr3 (30 HSPs)
chr3 (1-248)||(16743991-16744239)
chr3 (63-246)||(19231982-19232169)
chr3 (1-198)||(13839033-13839232)
chr3 (1-198)||(12030073-12030271)
chr3 (1-198)||(14842487-14842685)
chr3 (19-198)||(2049967-2050147)
chr3 (1-125)||(2449238-2449362)
chr3 (1-135)||(51158008-51158142)
chr3 (1-125)||(17912483-17912606)
chr3 (1-151)||(15858996-15859148)
chr3 (79-198)||(19260749-19260869)
chr3 (1-125)||(13975722-13975845)
chr3 (1-125)||(45860945-45861068)
chr3 (1-118)||(15936634-15936751)
chr3 (1-125)||(13954890-13955013)
chr3 (1-118)||(15938476-15938593)
chr3 (167-246)||(3992873-3992953)
chr3 (167-246)||(55513193-55513273)
chr3 (164-241)||(15857120-15857198)
chr3 (167-246)||(2844514-2844594)
chr3 (1-113)||(15614973-15615085)
chr3 (13-91)||(16821291-16821369)
chr3 (167-246)||(54037976-54038056)
chr3 (1-113)||(55316359-55316471)
chr3 (167-221)||(17955861-17955916)
chr3 (167-246)||(7854305-7854385)
chr3 (1-113)||(41270215-41270327)
chr3 (167-227)||(45581954-45582016)
chr3 (68-109)||(14080715-14080756)
chr3 (187-239)||(17191884-17191936)
[»] chr1 (19 HSPs)
chr1 (1-248)||(41394361-41394609)
chr1 (1-198)||(20913169-20913367)
chr1 (1-198)||(20931484-20931682)
chr1 (29-198)||(37844374-37844546)
chr1 (29-198)||(20445846-20446019)
chr1 (29-186)||(20531611-20531770)
chr1 (1-198)||(20893551-20893750)
chr1 (1-125)||(51452631-51452755)
chr1 (1-91)||(2116394-2116484)
chr1 (167-246)||(21860334-21860414)
chr1 (167-240)||(44034829-44034903)
chr1 (1-91)||(45051562-45051652)
chr1 (1-91)||(18601140-18601230)
chr1 (1-75)||(22227948-22228022)
chr1 (1-75)||(22232645-22232719)
chr1 (1-113)||(5072388-5072500)
chr1 (187-246)||(41218749-41218808)
chr1 (187-239)||(13376711-13376763)
chr1 (187-239)||(27675139-27675191)
[»] chr2 (20 HSPs)
chr2 (12-246)||(20627190-20627426)
chr2 (23-246)||(43642833-43643059)
chr2 (1-198)||(462877-463075)
chr2 (1-246)||(19794581-19794828)
chr2 (1-192)||(8891381-8891574)
chr2 (1-198)||(36982364-36982565)
chr2 (1-125)||(19689401-19689525)
chr2 (1-125)||(23820210-23820334)
chr2 (1-125)||(14906440-14906564)
chr2 (1-125)||(20015150-20015274)
chr2 (1-125)||(17396653-17396776)
chr2 (1-198)||(24341309-24341513)
chr2 (1-125)||(25265390-25265514)
chr2 (167-246)||(22284278-22284358)
chr2 (105-198)||(22863171-22863267)
chr2 (167-246)||(22275045-22275125)
chr2 (168-246)||(15633538-15633617)
chr2 (1-75)||(7507894-7507968)
chr2 (1-113)||(19886661-19886773)
chr2 (183-239)||(19660217-19660273)
[»] chr4 (16 HSPs)
chr4 (1-198)||(122028-122226)
chr4 (23-246)||(54118120-54118346)
chr4 (1-198)||(13246569-13246769)
chr4 (1-125)||(26680339-26680463)
chr4 (1-125)||(10488701-10488825)
chr4 (1-125)||(16327926-16328050)
chr4 (1-198)||(15675009-15675213)
chr4 (1-198)||(10104170-10104374)
chr4 (1-125)||(13048221-13048345)
chr4 (63-198)||(33240901-33241043)
chr4 (1-98)||(31115768-31115865)
chr4 (167-246)||(25119059-25119139)
chr4 (2-91)||(10644360-10644449)
chr4 (167-246)||(5682380-5682460)
chr4 (1-109)||(40885570-40885679)
chr4 (1-113)||(47357794-47357906)
[»] chr8 (21 HSPs)
chr8 (1-198)||(16193643-16193840)
chr8 (23-246)||(16404852-16405077)
chr8 (1-198)||(24928716-24928915)
chr8 (1-198)||(43373392-43373592)
chr8 (1-125)||(5238226-5238350)
chr8 (1-125)||(22907214-22907338)
chr8 (1-125)||(24661248-24661372)
chr8 (1-125)||(43685685-43685809)
chr8 (1-125)||(17345708-17345832)
chr8 (1-91)||(21844594-21844684)
chr8 (1-113)||(6774258-6774370)
chr8 (1-113)||(24549121-24549233)
chr8 (1-91)||(21851987-21852077)
chr8 (167-246)||(274766-274846)
chr8 (167-246)||(641003-641083)
chr8 (167-246)||(826809-826889)
chr8 (167-246)||(24716714-24716794)
chr8 (1-113)||(30120862-30120974)
chr8 (68-109)||(23226076-23226117)
chr8 (1-113)||(16674392-16674504)
chr8 (167-246)||(39115598-39115678)
[»] scaffold0266 (2 HSPs)
scaffold0266 (1-198)||(1263-1462)
scaffold0266 (1-198)||(3508-3706)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-198)||(48737-48935)
scaffold0023 (1-91)||(36233-36323)
[»] chr7 (25 HSPs)
chr7 (12-239)||(3060116-3060344)
chr7 (1-198)||(16211905-16212103)
chr7 (1-198)||(13036938-13037138)
chr7 (1-198)||(36052803-36053003)
chr7 (1-125)||(11516366-11516490)
chr7 (1-198)||(11580661-11580863)
chr7 (1-125)||(15441564-15441688)
chr7 (1-125)||(30262129-30262253)
chr7 (1-125)||(7293155-7293279)
chr7 (1-125)||(25292338-25292462)
chr7 (1-125)||(47481031-47481155)
chr7 (1-118)||(18253842-18253959)
chr7 (1-124)||(13321153-13321278)
chr7 (1-91)||(13572816-13572906)
chr7 (1-90)||(16478985-16479074)
chr7 (167-246)||(126738-126818)
chr7 (167-246)||(32493898-32493978)
chr7 (1-91)||(13911046-13911136)
chr7 (4-190)||(295900-296087)
chr7 (167-246)||(1936869-1936949)
chr7 (1-113)||(10989549-10989661)
chr7 (1-91)||(2437597-2437687)
chr7 (83-125)||(14113989-14114031)
chr7 (83-125)||(14423639-14423681)
chr7 (167-246)||(111121-111201)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-186)||(51121-51306)
[»] scaffold0106 (1 HSPs)
scaffold0106 (12-198)||(41879-42066)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-198)||(882-1080)
[»] scaffold0077 (2 HSPs)
scaffold0077 (1-199)||(36836-37037)
scaffold0077 (187-246)||(15319-15378)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-198)||(172044-172242)
scaffold0001 (1-198)||(177747-177945)
[»] chr5 (21 HSPs)
chr5 (1-198)||(23507104-23507302)
chr5 (1-198)||(27182471-27182671)
chr5 (1-125)||(20623108-20623232)
chr5 (1-125)||(21233528-21233652)
chr5 (1-125)||(37052883-37053007)
chr5 (1-125)||(16536336-16536460)
chr5 (1-198)||(18530988-18531191)
chr5 (1-123)||(25900408-25900530)
chr5 (1-198)||(22053753-22053957)
chr5 (1-125)||(34939416-34939540)
chr5 (1-113)||(29188284-29188396)
chr5 (1-91)||(27009981-27010071)
chr5 (1-91)||(4200007-4200097)
chr5 (1-91)||(43443417-43443507)
chr5 (1-113)||(19500039-19500151)
chr5 (1-113)||(22366481-22366593)
chr5 (1-113)||(25426768-25426880)
chr5 (1-91)||(18778014-18778104)
chr5 (1-113)||(12514-12626)
chr5 (1-113)||(21073595-21073707)
chr5 (187-241)||(11584394-11584448)
[»] scaffold0413 (1 HSPs)
scaffold0413 (14-198)||(5990-6175)
[»] chr6 (14 HSPs)
chr6 (1-198)||(23153586-23153786)
chr6 (1-154)||(14626089-14626242)
chr6 (1-125)||(1657748-1657872)
chr6 (1-125)||(15862610-15862734)
chr6 (1-125)||(35009439-35009563)
chr6 (130-198)||(23148266-23148335)
chr6 (167-246)||(19983144-19983224)
chr6 (167-246)||(35015009-35015089)
chr6 (1-113)||(1650105-1650217)
chr6 (42-125)||(27751605-27751688)
chr6 (167-246)||(18583640-18583720)
chr6 (1-85)||(25175703-25175787)
chr6 (1-113)||(27653983-27654095)
chr6 (28-125)||(29666040-29666137)
[»] scaffold0008 (2 HSPs)
scaffold0008 (19-198)||(128095-128275)
scaffold0008 (1-91)||(31697-31787)
[»] scaffold0302 (1 HSPs)
scaffold0302 (1-198)||(12252-12450)
[»] scaffold0162 (2 HSPs)
scaffold0162 (1-198)||(26340-26539)
scaffold0162 (1-125)||(8180-8304)
[»] scaffold0195 (2 HSPs)
scaffold0195 (1-190)||(19345-19537)
scaffold0195 (1-125)||(21429-21553)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-198)||(247366-247566)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-189)||(4996-5185)
[»] scaffold0028 (2 HSPs)
scaffold0028 (23-198)||(89378-89556)
scaffold0028 (74-198)||(107708-107835)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-198)||(123087-123288)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-125)||(26934-27058)
scaffold0141 (1-118)||(22679-22796)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-125)||(1582-1706)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-125)||(37066-37190)
scaffold0078 (167-246)||(41632-41712)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-198)||(272164-272362)
[»] scaffold0498 (1 HSPs)
scaffold0498 (13-198)||(9029-9215)
[»] scaffold0025 (3 HSPs)
scaffold0025 (1-157)||(148860-149018)
scaffold0025 (1-187)||(8988-9180)
scaffold0025 (105-198)||(146844-146938)
[»] scaffold0772 (1 HSPs)
scaffold0772 (1-118)||(5668-5785)
[»] scaffold0132 (2 HSPs)
scaffold0132 (1-125)||(13645-13769)
scaffold0132 (167-246)||(42677-42754)
[»] scaffold1542 (1 HSPs)
scaffold1542 (23-125)||(534-636)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-118)||(48326-48443)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-125)||(41787-41911)
[»] scaffold0026 (3 HSPs)
scaffold0026 (6-118)||(107891-108003)
scaffold0026 (1-56)||(64585-64640)
scaffold0026 (68-110)||(89863-89905)
[»] scaffold0116 (1 HSPs)
scaffold0116 (3-91)||(177-265)
[»] scaffold0075 (1 HSPs)
scaffold0075 (29-125)||(34460-34556)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-91)||(13347-13437)
[»] scaffold0215 (2 HSPs)
scaffold0215 (1-91)||(9371-9461)
scaffold0215 (1-91)||(16269-16359)
[»] scaffold0034 (1 HSPs)
scaffold0034 (167-246)||(80187-80267)
[»] scaffold0529 (1 HSPs)
scaffold0529 (1-114)||(3102-3215)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-90)||(43137-43226)
[»] scaffold0016 (2 HSPs)
scaffold0016 (166-246)||(166116-166197)
scaffold0016 (166-240)||(162036-162111)
[»] scaffold0184 (1 HSPs)
scaffold0184 (167-246)||(31132-31212)
[»] scaffold0686 (2 HSPs)
scaffold0686 (167-240)||(5735-5809)
scaffold0686 (167-240)||(5941-6015)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-91)||(14083-14173)
scaffold0139 (1-91)||(21138-21228)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-75)||(5254-5328)
[»] scaffold0342 (1 HSPs)
scaffold0342 (166-246)||(304-385)
[»] scaffold1711 (1 HSPs)
scaffold1711 (1-113)||(1304-1416)
[»] scaffold0361 (1 HSPs)
scaffold0361 (42-125)||(3370-3453)
[»] scaffold0369 (1 HSPs)
scaffold0369 (3-75)||(3863-3936)
[»] scaffold1164 (1 HSPs)
scaffold1164 (187-246)||(1721-1780)
[»] scaffold0122 (1 HSPs)
scaffold0122 (187-246)||(19802-19861)
[»] scaffold0456 (2 HSPs)
scaffold0456 (68-109)||(1546-1587)
scaffold0456 (68-109)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (68-109)||(8216-8257)
[»] scaffold0058 (1 HSPs)
scaffold0058 (68-109)||(70307-70348)
[»] scaffold0084 (1 HSPs)
scaffold0084 (46-118)||(56106-56178)


Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 16744239 - 16743991
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| |||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16744239 ttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagttggag 16744140  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacc-ccttaccttaa 199  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||    
T  16744139 cacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtaaagactaacctcgttaccttaa 16744040  T
Q  200 ttatctccaactactagctctaacttcactttggctcctatgcttctcc 248  Q
    ||||||||||||| |||||||| ||||||||| ||||||||| ||||||    
T  16744039 ttatctccaactattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 19231982 - 19232169
Alignment:
Q  63 atcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatt-cacaa 159  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  160 aatgatgatgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    |||||||||||||| | |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 19232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 13839033 - 13839232
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  13839033 ttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 13839132  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-ttcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||    
T  13839133 cacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaagactaacccccttacctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 12030271 - 12030073
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| ||| || ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  12030271 ttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggag 12030172  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| || ||| ||||||||||||    
T  12030171 cacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 14842685 - 14842487
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||    
T  14842685 ttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcacagttggag 14842586  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||  |||| ||| |||||||||| |||||||||| ||||||||||||    
T  14842585 cacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaagatgattatgataaagactaacccccttacctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 198
Target Start/End: Original strand, 2049967 - 2050147
Alignment:
Q  19 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaat 118  Q
    ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  2049967 tacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaat 2050066  T
Q  119 catccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
     |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  2050067 tatccataagcaaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 2449362 - 2449238
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2449362 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 2449263  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  2449262 cacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 51158142 - 51158008
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  51158142 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 51158043  T
Q  101 cacaaatttagcaacaatcatccataatcaaaatt 135  Q
    ||| |||||||||||||| |||||||| |||||||    
T  51158042 cacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17912606 - 17912483
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||    
T  17912606 ttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatc-aagttggag 17912508  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  17912507 cacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 15859148 - 15858996
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | ||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  15859148 ttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 15859049  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 151  Q
    ||| |||||||||||||| |||||| ||   ||||||||||||||| ||||||    
T  15859048 cacgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaa 15858996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 198
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  79 aaacatatcatcaaagttggagcacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggta 178  Q
    ||||||||||||| | || |||||| |||||||||||||| ||||||||  ||||||||||||||||||||||| | |||||||||||||||||||| ||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  179 aagactaa-ccccttacctta 198  Q
    |||||||| ||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13975845 - 13975722
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||||||||||    
T  13975845 ttcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaaagttggag 13975747  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  13975746 cacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 45860945 - 45861068
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||||||||||    
T  45860945 ttcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaaagttggag 45861043  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  45861044 cacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15936751 - 15936634
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||    
T  15936751 ttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggag 15936652  T
Q  101 cacaaatttagcaacaat 118  Q
    ||| ||||||| ||||||    
T  15936651 cacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13955013 - 13954890
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||  |||||| ||| |||||||||||| |||   ||||||||||||||| | || | |||||||||||||||| |||||||||||||||||||    
T  13955013 ttcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaaagttggag 13954915  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  13954914 cacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 15938593 - 15938476
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| |||||||||||  |||||||||||||| | ||||||||    
T  15938593 ttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttggag 15938494  T
Q  101 cacaaatttagcaacaat 118  Q
    |||  |||||| ||||||    
T  15938493 cacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 3992873 - 3992953
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 3992953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 55513193 - 55513273
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 55513273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 15857198 - 15857120
Alignment:
Q  164 atgatgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatg 241  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||| || |||||||| ||||||||| |||||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcctatg 15857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 2844514 - 2844594
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||| ||||| |||||||| ||||||||| ||||||||| ||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcctatgattct 2844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 15614973 - 15615085
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||| || || |||  |||    
T  15614973 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagag 15615072  T
Q  101 cacaaatttagca 113  Q
    ||||||| |||||    
T  15615073 cacaaatctagca 15615085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 16821291 - 16821369
Alignment:
Q  13 catttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    ||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||| ||||||||||||||| |||||    
T  16821291 catttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 54038056 - 54037976
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||| ||||||| |||||| | ||||||||| ||||||||| ||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 54037976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 55316359 - 55316471
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   |||    
T  55316359 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagag 55316458  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  55316459 cacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 17955916 - 17955861
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctcta 221  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctcta 17955861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 7854305 - 7854385
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| | || ||||||||| |||||||||||||| ||||||| |||||| | ||||||||| ||||||||| ||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 7854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 41270215 - 41270327
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| |||   |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   |||    
T  41270215 ttcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagag 41270314  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  41270315 cacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  167 atgattatggtaaagactaacccc--ttaccttaattatctccaactactagctctaacttca 227  Q
    ||||||||| |||| |||||||||  |||||||||||||||||||||| |||||||| |||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  68 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 109  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 17191884 - 17191936
Alignment:
Q  187 ccccttaccttaattatctccaactactagctctaacttcactttggctccta 239  Q
    |||||||||||||||||| |||| | ||||| | ||||||||||| |||||||    
T  17191884 ccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 17191936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 41394361 - 41394609
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||  | ||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||    
T  41394361 ttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcatagttggag 41394460  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttaccttaa 199  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||    
T  41394461 cacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaa 41394560  T
Q  200 ttatctccaactactagctctaacttcactttggctcctatgcttctcc 248  Q
    ||||||||||||| |||||||| ||||||||| ||||||||| ||||||    
T  41394561 ttatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 20913169 - 20913367
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  20913169 ttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggag 20913268  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| |||| ||| |||||||||||||||| |||||||||  |||||||| |||||||| | |||||||||| ||||||||||||    
T  20913269 cacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaatgaggatgattacgataaagactaacccccttacctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 20931484 - 20931682
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  20931484 ttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggag 20931583  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| |||||||| |||| ||||||||||| |||||||||  |||||||| |||||||||| ||||| |||| ||||||||||||    
T  20931584 cacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaatgaggatgattatgataaaggctaacccccttacctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 29 - 198
Target Start/End: Complemental strand, 37844546 - 37844374
Alignment:
Q  29 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataat 128  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| |||||| ||    
T  37844546 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattat 37844447  T
Q  129 --caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
       |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  37844446 gcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 29 - 198
Target Start/End: Original strand, 20445846 - 20446019
Alignment:
Q  29 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataat 128  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||| ||    
T  20445846 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattat 20445945  T
Q  129 --caaaattcatacaacatttgaaaa-ttcacaaaatgatgatgattatggtaaagactaac-cccttacctta 198  Q
       ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  20445946 gcaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaactcccttacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 20531611 - 20531770
Alignment:
Q  29 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataat 128  Q
    |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||| |||| | ||||||||| |||||||||||||| |||||| ||    
T  20531611 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattat 20531710  T
Q  129 --caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa 186  Q
       |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20531711 gcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaa 20531770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 20893750 - 20893551
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  20893750 ttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 20893651  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctt 197  Q
    ||  |||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||| |||||||||||    
T  20893650 caagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt-acaaaatgatgatgattatgatgaagactaacccccttacctt 20893552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 51452631 - 51452755
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  51452631 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgaag 51452730  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  51452731 cacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2116394 - 2116484
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  2116394 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 2116484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 21860334 - 21860414
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 21860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 44034903 - 44034829
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctat 240  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 44034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 45051562 - 45051652
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || |||||    
T  45051562 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatca 45051652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18601230 - 18601140
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  18601230 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 18601140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22227948 - 22228022
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 75  Q
    |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| |||||||||||||    
T  22227948 ttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22228022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22232645 - 22232719
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 75  Q
    |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| |||||||||||||    
T  22232645 ttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22232719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5072500 - 5072388
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||| ||||||| ||||| ||   |||    
T  5072500 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcacagcaagag 5072401  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  5072400 cacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 41218749 - 41218808
Alignment:
Q  187 ccccttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    |||||||||||||||||| ||||||| |||||| | ||||||||| ||||||||| ||||    
T  41218749 ccccttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 41218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 13376763 - 13376711
Alignment:
Q  187 ccccttaccttaattatctccaactactagctctaacttcactttggctccta 239  Q
    |||||||||||||||||| |||| | ||||| | ||||||||||| |||||||    
T  13376763 ccccttaccttaattatcaccaattcctagcccaaacttcactttagctccta 13376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 27675139 - 27675191
Alignment:
Q  187 ccccttaccttaattatctccaactactagctctaacttcactttggctccta 239  Q
    ||||||||||||||||||||||| | ||||| | | ||||||||| |||||||    
T  27675139 ccccttaccttaattatctccaattcctagcccaagcttcactttagctccta 27675191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 12 - 246
Target Start/End: Complemental strand, 20627426 - 20627190
Alignment:
Q  12 tcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttag 111  Q
    |||||| |||||||||  ||||| ||| | ||||||||||||||| |||| |||||||| |||||||||||||||||||| ||||||||||| ||||||     
T  20627426 tcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaa 20627327  T
Q  112 caacaatcatccataatcaaaattcatacaacatttgaaaa-ttcacaaaatgatgatgattatggtaaagactaacccc-ttaccttaattatctccaa 209  Q
    ||||||| ||||||||||| ||||||||||| ||||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  20627326 caacaattatccataatcataattcatacaatatttgaaaattttacaaaatgatgatgattatgataaagactaaccccgttaccttaattatctccaa 20627227  T
Q  210 ctactagctctaacttcactttggctcctatgcttct 246  Q
    ||| |||||||| ||||||||| ||||||||| ||||    
T  20627226 ctattagctctagcttcacttttgctcctatgattct 20627190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 43643059 - 43642833
Alignment:
Q  23 tatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatc 122  Q
    ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||    
T  43643059 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatc 43642960  T
Q  123 cataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacc-ccttaccttaattatctccaactactagctc 219  Q
    ||  ||   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||||    
T  43642959 cactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacctccttcccttaattatctccaactattagctc 43642860  T
Q  220 taacttcactttggctcctatgcttct 246  Q
    || ||||||||| ||||||||| ||||    
T  43642859 tagcttcacttttgctcctatgattct 43642833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 462877 - 463075
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||||||||| ||||||||    
T  462877 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggag 462976  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  462977 cacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 19794828 - 19794581
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19794828 ttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcacagttggag 19794729  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctt 197  Q
    ||| |||||| | ||||| |||||| ||   ||||||||||||||||||| ||||| ||||||| |||||||||||| | |||||||| |||||||||||    
T  19794728 cacgaatttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatttacaaaataatgatgattatgatgaagactaacccccttacctt 19794630  T
Q  198 aattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||||||||| |||||||| ||||||||| |||| |||| ||||    
T  19794629 aattatctccaactattagctctagcttcacttttgctcttatgattct 19794581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 8891381 - 8891574
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| |  |||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||    
T  8891381 ttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggag 8891480  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccctt 192  Q
    ||| |||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  8891481 cacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccctt 8891574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 36982565 - 36982364
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | |||| ||||| |||| |||| ||||||||||| ||||||||||||||||| ||||||||    
T  36982565 ttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcacagttggag 36982466  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcac-aaaatgatgatgattatggtaaagactaa-ccccttacct 196  Q
    ||| |||||||||||||| |||||| ||   ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||| ||||||||||    
T  36982465 cacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaacccccttacct 36982366  T
Q  197 ta 198  Q
    ||    
T  36982365 ta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 19689525 - 19689401
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19689525 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 19689426  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  19689425 cacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 23820210 - 23820334
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23820210 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 23820309  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  23820310 cacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 14906564 - 14906440
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14906564 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 14906465  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  14906464 cacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 20015150 - 20015274
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  20015150 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatcatcaaagttggag 20015249  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  20015250 cacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17396776 - 17396653
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||| |||||||||||||||||||||    
T  17396776 ttcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagttggag 17396678  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  17396677 cacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 24341513 - 24341309
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||  ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||    
T  24341513 ttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgaag 24341414  T
Q  101 cacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaa-cccctta 193  Q
    ||  |||||||||||||| |||||  ||   ||||||||||| ||||||||||| |  ||||    ||||||||||||||| | |||||||| |||||||    
T  24341413 catgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaaccccctta 24341314  T
Q  194 cctta 198  Q
    |||||    
T  24341313 cctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 25265514 - 25265390
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||    
T  25265514 ttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagag 25265415  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  25265414 cacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 22284278 - 22284358
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcctatgattct 22284358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 22863171 - 22863267
Alignment:
Q  105 aatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    |||||||||||||| |||||| ||   ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  22863171 aatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 22275045 - 22275125
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 22275125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 15633538 - 15633617
Alignment:
Q  168 tgattatggtaaagactaacc-ccttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| || ||||| ||||||||| ||||||||| ||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcctatgattct 15633617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7507968 - 7507894
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 75  Q
    |||||||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  7507968 ttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19886773 - 19886661
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   |||    
T  19886773 ttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagag 19886674  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  19886673 cacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 19660217 - 19660273
Alignment:
Q  183 ctaaccccttaccttaattatctccaactactagctctaacttcactttggctccta 239  Q
    |||||||||||||||||||||| |||| | ||||| | | ||||||||| |||||||    
T  19660217 ctaaccccttaccttaattatcaccaattcctagcccaagcttcactttagctccta 19660273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 122028 - 122226
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  122028 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggag 122127  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  122128 cacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatccccttacctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 54118346 - 54118120
Alignment:
Q  23 tatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatc 122  Q
    ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||    
T  54118346 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatc 54118247  T
Q  123 cataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttaccttaattatctccaactactagctc 219  Q
    ||| ||   ||||||||||||||||||||||||||||||||| |||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||    
T  54118246 cattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctc 54118147  T
Q  220 taacttcactttggctcctatgcttct 246  Q
    || ||||||||| |||| |||| ||||    
T  54118146 tagcttcacttttgctcttatgattct 54118120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 13246569 - 13246769
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| || |||||||||||||||||||||||||| ||||| ||    
T  13246569 ttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcacagttgtag 13246668  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctt 197  Q
    ||| |||||| ||||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  13246669 cacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 13246768  T
Q  198 a 198  Q
    |    
T  13246769 a 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 26680339 - 26680463
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26680339 ttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 26680438  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  26680439 cacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 10488701 - 10488825
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10488701 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 10488800  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  10488801 cacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16328050 - 16327926
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16328050 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 16327951  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  16327950 cacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 15675213 - 15675009
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  15675213 ttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 15675114  T
Q  101 cacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaa-cccctta 193  Q
    ||| |||||||||||||| |||||  ||   ||||||||||| ||||||||||| |  ||||    ||||||||||||||| | |||||||| |||||||    
T  15675113 cacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaaccccctta 15675014  T
Q  194 cctta 198  Q
    |||||    
T  15675013 cctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 10104374 - 10104170
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  10104374 ttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 10104275  T
Q  101 cacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaa-cccctta 193  Q
    |||  ||||||||||||| |||||  ||   ||||||||||| ||||||||||| |   |||    ||||||||||||||| | |||||||| |||||||    
T  10104274 cacggatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaaccccctta 10104175  T
Q  194 cctta 198  Q
    |||||    
T  10104174 cctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13048345 - 13048221
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| |||||||||||||||||||||  |||||||||    
T  13048345 ttcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattgaagttggag 13048246  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||  |||||||||||||| ||||||    
T  13048245 catgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 198
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
Q  63 atcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcacaaa 160  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||  ||   ||||||||||| ||||||||||| |  ||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
Q  161 ----atgatgatgattatggtaaagactaa-ccccttacctta 198  Q
        ||||||||||||||| | |||||||| ||||||||||||    
T  33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 31115768 - 31115865
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttgg 98  Q
    |||| |||||| ||||| |||||| |  |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  31115768 ttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttgg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 25119139 - 25119059
Alignment:
Q  167 atgattatggtaaagactaac-cccttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 25119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 10644360 - 10644449
Alignment:
Q  2 tcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||  ||||| ||||||||| |||||| ||| | || |||||||||||| |||| ||||||||||||||||||||||| |||||    
T  10644360 tcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatca 10644449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 5682460 - 5682380
Alignment:
Q  167 atgattatggtaaagactaaccc-cttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| |||||||| ||||||||||||||| ||||||| ||||||   ||||||||| ||||||||| ||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcctatgattct 5682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40885679 - 40885570
Alignment:
Q  1 ttcataacttctcatttctacata-tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttgga 99  Q
    ||||||||||  ||||| |||||| ||| |||||| ||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||    
T  40885679 ttcataacttgacatttatacatactttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttgga 40885580  T
Q  100 gcacaaattt 109  Q
    | || |||||    
T  40885579 gtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 47357794 - 47357906
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||| |||||||||||||||| ||||| ||   |||    
T  47357794 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataacatcacagcaagag 47357893  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  47357894 cacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 16193840 - 16193643
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| |  |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  16193840 ttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggag 16193741  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaaccccttacctta 198  Q
    ||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||    
T  16193740 cacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaatgatgatgattatgataaagactaaccccttacctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 16405077 - 16404852
Alignment:
Q  23 tatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatc 122  Q
    ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||    
T  16405077 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatc 16404978  T
Q  123 cataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttaccttaattatctccaactactagctc 219  Q
    ||| ||   ||||||||||||||||||||||||| || |||| |||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||    
T  16404977 catcatgcaaaaattcatacaacatttgaaaatttac-aaataatgatgattatgatgaagactaacccccttaccttaattatctccaactattagctc 16404879  T
Q  220 taacttcactttggctcctatgcttct 246  Q
    || ||||||||| ||||||||| ||||    
T  16404878 tagcttcacttttgctcctatgattct 16404852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 24928915 - 24928716
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||    
T  24928915 ttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcacagttggag 24928816  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-ttcacaaaatgatgatgattatggtaaagactaacccc-ttacctta 198  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||| ||||||||    
T  24928815 cacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgattatgataaagactaaccccattacctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 43373592 - 43373392
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||| |||||||||||||||||||| |||||||| ||||||||    
T  43373592 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggag 43373493  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctt 197  Q
    ||| |||||||||  ||| |||||| ||   |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  43373492 cacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctt 43373393  T
Q  198 a 198  Q
    |    
T  43373392 a 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 5238226 - 5238350
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5238226 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 5238325  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  5238326 cacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 22907338 - 22907214
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22907338 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 22907239  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  22907238 cacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 24661372 - 24661248
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24661372 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 24661273  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  24661272 cacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 43685685 - 43685809
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43685685 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 43685784  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  43685785 cacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 17345708 - 17345832
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    ||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||| ||||||| ||||| |||| |||    
T  17345708 ttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcacagttagag 17345807  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| ||||| |||||||| ||||||    
T  17345808 cacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 21844684 - 21844594
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  21844684 ttcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6774370 - 6774258
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||  |||    
T  6774370 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagag 6774271  T
Q  101 cacaaatttagca 113  Q
    ||| ||| |||||    
T  6774270 cacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24549121 - 24549233
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||  |||    
T  24549121 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagag 24549220  T
Q  101 cacaaatttagca 113  Q
    ||| ||| |||||    
T  24549221 cacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 21852077 - 21851987
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| |||||||||||||||  ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  21852077 ttcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21851987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 274766 - 274846
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 274846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 641083 - 641003
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 826889 - 826809
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 826809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 24716794 - 24716714
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||||||||| ||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcctatgattct 24716714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 30120862 - 30120974
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||||||||||| ||||| ||   |||    
T  30120862 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcacagcaagag 30120961  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  30120962 cacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
Q  68 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 109  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  23226117 ttcatgcatacaaacatatcatcatagttagagcacaaattt 23226076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 16674504 - 16674392
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  || |||||||||||| ||||||| ||||| ||   |||    
T  16674504 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcacagaaagag 16674405  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  16674404 cacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 39115598 - 39115678
Alignment:
Q  167 atgattatggtaaagactaac-cccttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| | || |||||| ||||||||||||||||  ||||||| |||||| | ||||||||| ||||||||| ||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcctatgattct 39115678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 1263 - 1462
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  1263 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaaagttggag 1362  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-ttcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  1363 cacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 3706 - 3508
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  3706 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 3607  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||| ||||||||||  ||||||||| ||||||||||||    
T  3606 cacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagactaacccccttacctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 48737 - 48935
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  48737 ttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 48836  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  48837 cacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36233 - 36323
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||| |||||||||||| |||||    
T  36233 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 12 - 239
Target Start/End: Original strand, 3060116 - 3060344
Alignment:
Q  12 tcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttag 111  Q
    |||||| ||||||||| |||||| ||| | ||||||| |  |||| |||| ||||||| ||||||||||| |||| |||| ||||||||||| |||||||    
T  3060116 tcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagttggagcacgaatttag 3060215  T
Q  112 caacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagac-taaccccttaccttaattatctccaac 210  Q
    ||||||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||    
T  3060216 caacaattatccataagcaaaattcatataacatttgaaaatttacaaaatgatgatgattatgataaagacttacccccttaccttcattatctccaac 3060315  T
Q  211 tactagctctaacttcactttggctccta 239  Q
    || |||||||| ||||||||| |||||||    
T  3060316 tattagctctagcttcacttttgctccta 3060344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 16211905 - 16212103
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | || ||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  16211905 ttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggag 16212004  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| ||||||||||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  16212005 cacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 13037138 - 13036938
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  13037138 ttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 13037039  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctt 197  Q
    ||| |||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||    
T  13037038 cacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtgaagactaacccccttacctt 13036939  T
Q  198 a 198  Q
    |    
T  13036938 a 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 36052803 - 36053003
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||| |||||||||||||||||||| |||||||| ||||||||    
T  36052803 ttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagttggag 36052902  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctt 197  Q
     | ||||||||||||||| |||||| ||   |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  36052903 tataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctt 36053002  T
Q  198 a 198  Q
    |    
T  36053003 a 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 11516366 - 11516490
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11516366 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 11516465  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  11516466 cacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 11580863 - 11580661
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||||    
T  11580863 ttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagttggag 11580764  T
Q  101 cacaaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaattcac-aaaatgatgatgattatggtaaagactaa-ccccttacc 195  Q
    ||| |||||||||| ||| |||||| ||    ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||| |||||||||    
T  11580763 cacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaatccccttacc 11580664  T
Q  196 tta 198  Q
    |||    
T  11580663 tta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 15441688 - 15441564
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15441688 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 15441589  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  15441588 cacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 30262253 - 30262129
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30262253 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 30262154  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  30262153 cacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 7293155 - 7293279
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  7293155 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatcatcaaagttggag 7293254  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  7293255 cacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 25292462 - 25292338
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| |||||||||||||||||||||||||||    
T  25292462 ttcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaaagttggag 25292363  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    |||||||||||||||||| ||||||    
T  25292362 cacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 47481155 - 47481031
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |||    
T  47481155 ttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagag 47481056  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  47481055 cacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 18253959 - 18253842
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||    
T  18253959 ttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggag 18253860  T
Q  101 cacaaatttagcaacaat 118  Q
    ||| ||||||| ||||||    
T  18253859 cacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 13321153 - 13321278
Alignment:
Q  1 ttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttgg 98  Q
    ||||||||||  ||||| |||||| ||  ||||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |    
T  13321153 ttcataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttag 13321252  T
Q  99 agcacaaatttagcaacaatcatcca 124  Q
    ||||| |||||||||||||| |||||    
T  13321253 agcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13572816 - 13572906
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| |||||||||||||||| ||| | ||||||||||| ||| | || ||||||||||||||||||||||| |||||    
T  13572816 ttcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatca 13572906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16479074 - 16478985
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatc 90  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  16479074 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatc 16478985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 126738 - 126818
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||| ||||||||| ||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcctatgattct 126818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 32493978 - 32493898
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 32493898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13911136 - 13911046
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatca 13911046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 296087 - 295900
Alignment:
Q  4 ataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcac 103  Q
    |||||||||||||| |||||| || |||||| ||| | |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | || || |||    
T  296087 ataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaattagaacac 295988  T
Q  104 aaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaacccc 190  Q
     |||||||||||||| || ||| || ||||| |||||||||  ||||||||| || ||||||||||  |||||| | ||||| ||||||    
T  295987 gaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaacccc 295900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 1936949 - 1936869
Alignment:
Q  167 atgattatggtaaagactaacc-ccttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||| |||||||||||||||||||||||| || ||||| ||||||||| ||| ||||| ||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttttgcttctatgattct 1936869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10989549 - 10989661
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   |||    
T  10989549 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagag 10989648  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  10989649 cacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2437597 - 2437687
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  2437597 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 2437687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  83 atatcatcaaagttggagcacaaatttagcaacaatcatccat 125  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  83 atatcatcaaagttggagcacaaatttagcaacaatcatccat 125  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 111201 - 111121
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| | || ||||||||| |||||||||||||| ||||||  |||||| | ||||||||| ||||||||| ||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcctatgattct 111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 51306 - 51121
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||||||||| ||||||||    
T  51306 ttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagttggag 51207  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa 186  Q
    ||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  51206 cacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaa 51121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 12 - 198
Target Start/End: Original strand, 41879 - 42066
Alignment:
Q  12 tcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttag 111  Q
    |||||| ||||||||| | |||| ||| | |||||||||   ||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  41879 tcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttag 41978  T
Q  112 caacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| || ||||||||||||    
T  41979 caacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagaccaacccccttacctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 1080 - 882
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  1080 ttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 981  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||   ||| ||| |||||||||| |||||||||| ||||||||||||    
T  980 cacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaagtgaagatgattatgataaagactaacccccttacctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 37037 - 36836
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | |||||||| | |||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  37037 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagttggag 36938  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctt 197  Q
    ||| |||||| ||||||| |||||| ||   |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  36937 cacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttacctt 36838  T
Q  198 aa 199  Q
    ||    
T  36837 aa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 15378 - 15319
Alignment:
Q  187 ccccttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    |||||||||||||||||||||||||| |||| | | ||||||||| ||||||||| ||||    
T  15378 ccccttaccttaattatctccaactattagcccaagcttcacttttgctcctatgattct 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 172044 - 172242
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |||||||||||||||||| ||||||||    
T  172044 ttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggag 172143  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    |||  ||||||||||| | |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  172144 cacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 177747 - 177945
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |||||||||||||||||| ||||||||    
T  177747 ttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagttggag 177846  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    |||  ||||||||||| | |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  177847 cacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 23507104 - 23507302
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |  |||||    
T  23507104 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaaatggag 23507203  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| |||||||| |||||||||||||||||||||||  | ||||||||  |||||||||| |||||||||| ||||||||||||    
T  23507204 cacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagactaacccccttacctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 27182671 - 27182471
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| |||| |||||||||||||||||||||||| ||||||||    
T  27182671 ttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacagttggag 27182572  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctt 197  Q
    ||  |||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||| |||||||||||    
T  27182571 catgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctt 27182472  T
Q  198 a 198  Q
    |    
T  27182471 a 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 20623108 - 20623232
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20623108 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 20623207  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  20623208 cacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 21233652 - 21233528
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21233652 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 21233553  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  21233552 cacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 37052883 - 37053007
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37052883 ttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 37052982  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  37052983 cacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 16536336 - 16536460
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  16536336 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatcatcaaagttggag 16536435  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  16536436 cacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 18531191 - 18530988
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  18531191 ttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 18531092  T
Q  101 cacaaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaattcacaaaatgatgat---gattatggtaaagactaa-ccccttac 194  Q
    ||| |||||||||||||| |||| || || ||| |||||||| ||||||||||| |  ||||||||||||   ||||||| | |||||||| ||||||||    
T  18531091 cacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgcaaaatgatgatgacgattatgatgaagactaacccccttac 18530992  T
Q  195 ctta 198  Q
    ||||    
T  18530991 ctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 25900530 - 25900408
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||  ||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  25900530 ttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaaagttggag 25900431  T
Q  101 cacaaatttagcaacaatcatcc 123  Q
    ||| |||||||||||||| ||||    
T  25900430 cacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 22053957 - 22053753
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||| ||| | |||||||||||||||  ||| |||||||||| |||||||||||||||||| ||||||||    
T  22053957 ttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcacagttggag 22053858  T
Q  101 cacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa--ttcacaaa--atgatgatgattatggtaaagactaa-cccctta 193  Q
    ||| |||||||||||||| |||||  ||   ||||||||||| |||||||||||  |||| |||  ||||||||||||||| | |||||||| |||||||    
T  22053857 cacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaaaaatgatgatgatgattatgatgaagactaaccccctta 22053758  T
Q  194 cctta 198  Q
    |||||    
T  22053757 cctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 34939416 - 34939540
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    ||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |||    
T  34939416 ttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagag 34939515  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||| | ||||||    
T  34939516 cacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 29188396 - 29188284
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||  |||    
T  29188396 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagag 29188297  T
Q  101 cacaaatttagca 113  Q
    ||| ||| |||||    
T  29188296 cacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27009981 - 27010071
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| |||||||||||||||| ||| | ||||||| ||||||| | || ||||||||||||||||||||||| |||||    
T  27009981 ttcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatca 27010071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4200097 - 4200007
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  4200097 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 4200007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43443507 - 43443417
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  43443507 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 43443417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 19500039 - 19500151
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   |||    
T  19500039 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagag 19500138  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  19500139 cacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 22366593 - 22366481
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   |||    
T  22366593 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagag 22366494  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  22366493 cacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25426768 - 25426880
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   |||    
T  25426768 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagag 25426867  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  25426868 cacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18778104 - 18778014
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| |||||    
T  18778104 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatca 18778014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12514 - 12626
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||   |||    
T  12514 ttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagcaagag 12613  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  12614 cacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21073707 - 21073595
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  ||| ||||||||||||||||||| ||||| ||   |||    
T  21073707 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcacagcaagag 21073608  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  21073607 cacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 11584394 - 11584448
Alignment:
Q  187 ccccttaccttaattatctccaactactagctctaacttcactttggctcctatg 241  Q
    |||||||||||||||||| ||||||| || ||| | ||||||||| |||||||||    
T  11584394 ccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatg 11584448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 6175 - 5990
Alignment:
Q  14 atttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagca 113  Q
    |||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  6175 atttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 6076  T
Q  114 acaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||||| ||||||||||| |||||||||||||||||| ||||  |||| |||  ||||||||| |||||||||| ||||||||||||    
T  6075 acaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaaaatgattatgataaagactaacccccttacctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 9e-51; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 23153586 - 23153786
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  23153586 ttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggag 23153685  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctt 197  Q
    ||| ||||||| |||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||| |||||||||||    
T  23153686 cacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctt 23153785  T
Q  198 a 198  Q
    |    
T  23153786 a 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 14626242 - 14626089
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||   |||    
T  14626242 ttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagag 14626143  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt 154  Q
    ||| |||||||||| ||| ||||||||||| |||||| ||||||||||| ||||    
T  14626142 cacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatt 14626089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 1657872 - 1657748
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    ||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| |||||||||||||| |||||||| ||||| |||| |||    
T  1657872 ttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcacagttagag 1657773  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  1657772 cacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 15862610 - 15862734
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    ||||||||||| ||||| |||||| || ||||||  || | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |||    
T  15862610 ttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagag 15862709  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| ||||||| |||||| ||||||    
T  15862710 cacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 35009563 - 35009439
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||| |||    
T  35009563 ttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcacagttagag 35009464  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  35009463 cacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  130 aaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 19983224 - 19983144
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 19983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 35015089 - 35015009
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 35015009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1650217 - 1650105
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||  ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||  |||    
T  1650217 ttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagag 1650118  T
Q  101 cacaaatttagca 113  Q
    ||| ||| |||||    
T  1650117 cacgaatctagca 1650105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  42 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 125  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || |||||| |||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 18583640 - 18583720
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| | || ||||||||| |||||||||||||| ||||||| || ||| | ||||||||| ||||||||| ||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 18583720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 25175703 - 25175787
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacata 85  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||||||||    
T  25175703 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 25175787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 27654095 - 27653983
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |||||  ||  |||||||||||||||||| |||| ||||| ||   |||    
T  27654095 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataacatcacagcaagag 27653996  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  27653995 cacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 29666040 - 29666137
Alignment:
Q  28 aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 125  Q
    ||||||| ||| | ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | |||||| |||||| ||||||| ||||||    
T  29666040 aaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 128275 - 128095
Alignment:
Q  19 tacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaat 118  Q
    |||| |||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  128275 tacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaat 128176  T
Q  119 catccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
     |||||||| ||||||||||||||| ||||||||||  |||||||| |||||||||| |||||||||| ||||||||||||    
T  128175 tatccataagcaaaattcatacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| | ||||| | || ||| ||| | |||||||||||||||  ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 12252 - 12450
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| |||| ||||||||||| | | | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| |||    
T  12252 ttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttagag 12351  T
Q  101 cacaaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| |||||||||||||| |||||||| ||||||||| || ||||||| | |||||||||| |||||||||| ||||||||||||    
T  12352 cacgaatttagcaacaattatccataatcaaaatttcatacagcatttgaaagtt-acaaaattaagatgattatgataaagactaacccccttacctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 26539 - 26340
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| | | | ||||| |||| |||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  26539 ttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaagttggag 26440  T
Q  101 cacaaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| |||||||||||||| || ||| ||  ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||||||||||    
T  26439 cacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaagactaacccccttacctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 8304 - 8180
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || ||| || ||| | ||||||||||||||| |||| | ||||||||||||||||||||| ||||| |||| |||    
T  8304 ttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcacagttagag 8205  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  8204 cacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 19345 - 19537
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  19345 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggag 19444  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcac-aaaatgatgatgattatggtaaagactaacccc 190  Q
    ||| |||||||||||||| |||||| ||   ||||||||||||||||||||||||| || ||||| |||||||||||| | ||||||||||||    
T  19445 cacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaattatgatgattatgatgaagactaacccc 19537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 21429 - 21553
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  21429 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggag 21528  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  21529 cacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 247566 - 247366
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | |||  |||||||||| |||| ||||||||||||||||||||||||||| | ||||||||    
T  247566 ttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggag 247467  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctt 197  Q
    ||| |||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||    
T  247466 cacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctt 247367  T
Q  198 a 198  Q
    |    
T  247366 a 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 5185 - 4996
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| | | | |||||||||| |||| |||| ||||||||| ||||||||||||||| ||| ||||||||    
T  5185 ttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcacagttggag 5086  T
Q  101 cacaaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaaccc 189  Q
     || |||||||||||||| |||||| ||  ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  5085 tacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 89556 - 89378
Alignment:
Q  23 tatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatc 122  Q
    ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| |||    
T  89556 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatc 89457  T
Q  123 cataat--caaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||| ||   |||||||||| |||||||||||||| |||||||||||||||| ||| | |||||||| ||||||||||||    
T  89456 cattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttacctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 198
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  74 catacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattcacaaaatgatgatgat 171  Q
    |||||||| ||||||||| ||||||||||| |||||||||| ||| |||||| ||   ||||||||||||||||||||||||| ||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  172 tatggtaaagactaa-ccccttacctta 198  Q
     ||| | |||||||| ||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 123288 - 123087
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||    
T  123288 ttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggag 123189  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcac-aaaatgatgatgattatggtaaagactaa-ccccttacct 196  Q
    ||| |||||||||||||| |||||| ||   ||||||||||||||||||| ||||| || ||||| |||||||||||||| |||||||| ||||||||||    
T  123188 cacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaaaaattatgatgattatggtgaagactaacccccttacct 123089  T
Q  197 ta 198  Q
    ||    
T  123088 ta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 26934 - 27058
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26934 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 27033  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  27034 cacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22679 - 22796
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22679 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 22778  T
Q  101 cacaaatttagcaacaat 118  Q
    ||| ||||||||||||||    
T  22779 cacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 1706 - 1582
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1706 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 1607  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  1606 cacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37190 - 37066
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37190 ttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttggag 37091  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  37090 cacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 41632 - 41712
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    |||||| || |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 41712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 272164 - 272362
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| | | ||||| |||||| ||| |  ||| |||||||||| |||| |||||||||| |||||||||||||||| | ||||||||    
T  272164 ttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatcattacagttggag 272263  T
Q  101 cacaaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
     ||  ||||||||| | | |||||||||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  272264 tacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 9029 - 9215
Alignment:
Q  13 catttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagc 112  Q
    ||||| |||||| || |||||| ||| | |||||||||| |||| |||| ||| ||||||||||||||||||| ||||| |  |||||||| ||||||||    
T  9029 catttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcacaaatggagcacgaatttagc 9128  T
Q  113 aacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||||||  ||||||| |||||||| |||||| ||||||||||  |||||||| |||||||||| |||||||||| ||||||||||||    
T  9129 aacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttacctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 148860 - 149018
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  148860 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttggag 148959  T
Q  101 cacaaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattcac 157  Q
    |||||||||| ||||||| ||| || ||   |||||||||||||||||||||| |||||    
T  148960 cacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaatttcac 149018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 8988 - 9180
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| || |||||    
T  8988 ttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagatggag 9087  T
Q  101 cacaaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaattcacaaa----atgatgatgattatggtaaagactaac 187  Q
    ||| |||||||||||||| |||||  ||   ||||| ||||| ||||||||||| |  ||||    ||||||||||||||| | |||||||||    
T  9088 cacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaac 9180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 146844 - 146938
Alignment:
Q  105 aatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattcacaaaatgatgatgattatggtaaagactaa-ccccttacctta 198  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  146844 aatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 146938  T

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Target: scaffold0772 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5668 - 5785
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||||||||||||    
T  5668 ttcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaaagttggag 5767  T
Q  101 cacaaatttagcaacaat 118  Q
    ||| ||||||||||||||    
T  5768 cacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 13645 - 13769
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||    
T  13645 ttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagttagag 13744  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||||||||||| ||||||    
T  13745 cacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 42677 - 42754
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||| ||||||||| |||||||   |||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  42677 atgattatgataaaaactaacccccttacctt---tatctccaactattagctctagcttcacttttgctcctatgattct 42754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 636 - 534
Alignment:
Q  23 tatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatc 122  Q
    ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||    
T  636 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatc 537  T
Q  123 cat 125  Q
    |||    
T  536 cat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 48326 - 48443
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||    
T  48326 ttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggag 48425  T
Q  101 cacaaatttagcaacaat 118  Q
    ||| ||||||||||||||    
T  48426 cacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 41787 - 41911
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |||    
T  41787 ttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagag 41886  T
Q  101 cacaaatttagcaacaatcatccat 125  Q
    ||| |||||| ||||||| ||||||    
T  41887 cacgaatttaacaacaattatccat 41911  T

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Target: scaffold0026 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 107891 - 108003
Alignment:
Q  6 aacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaa 105  Q
    ||||| |||||| | || |||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||| |    
T  107891 aacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacga 107990  T
Q  106 atttagcaacaat 118  Q
    |||||| ||||||    
T  107991 atttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 64640 - 64585
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcataca 56  Q
    |||||||||| |||||| |||||||||||||||| ||| | |||||||||||||||    
T  64640 ttcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcataca 64585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  68 ttcatgcatacaaacatatcatcaaagttggagcacaaattta 110  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 177 - 265
Alignment:
Q  3 cataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  177 cataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 34556 - 34460
Alignment:
Q  29 aacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 125  Q
    |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||| |||||| |||||||||| ||| ||||||    
T  34556 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13437 - 13347
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  13437 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 13347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 9461 - 9371
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  9461 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 16359 - 16269
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  16359 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 80187 - 80267
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |||||| | ||||||||| ||||||||| ||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcctatgattct 80267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3102 - 3215
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| ||||||||||| ||||||||||| ||||| ||   |||    
T  3102 ttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcacagcaagag 3201  T
Q  101 cacaaatttagcaa 114  Q
    ||| ||||||||||    
T  3202 cacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 43137 - 43226
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatc 90  Q
    ||||||||||  ||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||| ||||||| ||||    
T  43137 ttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 166197 - 166116
Alignment:
Q  166 gatgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    |||||||||| | || ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 166116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 162111 - 162036
Alignment:
Q  166 gatgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctat 240  Q
    |||||||||| | || ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 31212 - 31132
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    |||||| || |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctatgattct 31132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 5809 - 5735
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctat 240  Q
    ||||||||| | || ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 6015 - 5941
Alignment:
Q  167 atgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctat 240  Q
    ||||||||| | || ||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcctat 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14173 - 14083
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
T  14173 ttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 21228 - 21138
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 91  Q
    |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||| ||| ||||||||||| |||||    
T  21228 ttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatca 21138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 5328 - 5254
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 75  Q
    |||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  5328 ttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 385 - 304
Alignment:
Q  166 gatgattatggtaaagactaacccc-ttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    |||||||||| |||||| ||||||| |||||||||||||| ||||||| |||||| | ||||||||| ||||||||| ||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcctatgattct 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1416 - 1304
Alignment:
Q  1 ttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggag 100  Q
    |||||||||| |||||| | ||||| | |||||| ||| | |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||   |||    
T  1416 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagag 1317  T
Q  101 cacaaatttagca 113  Q
    ||| |||||||||    
T  1316 cacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 3370 - 3453
Alignment:
Q  42 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaatcatccat 125  Q
    |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | |||||| ||||||||| |||| ||||||    
T  3370 accaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 3863 - 3936
Alignment:
Q  3 cataacttctcatttct-acatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgca 75  Q
    |||||||| |||||| | |||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||    
T  3863 cataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

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Target: scaffold1164 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 1721 - 1780
Alignment:
Q  187 ccccttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    |||||||||||||||||| ||||||| || ||| | ||||||||| ||||||||| ||||    
T  1721 ccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 1780  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 19861 - 19802
Alignment:
Q  187 ccccttaccttaattatctccaactactagctctaacttcactttggctcctatgcttct 246  Q
    |||||||||||||||||| ||||||| || ||| | ||||||||| ||||||||| ||||    
T  19861 ccccttaccttaattatcaccaactattaactcaagcttcacttttgctcctatgattct 19802  T

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Target: scaffold0456 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  68 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 109  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

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Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  68 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 109  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  68 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 109  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

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Target: scaffold0058 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  68 ttcatgcatacaaacatatcatcaaagttggagcacaaattt 109  Q
    |||||||||||||||||||||||| |||||||| || |||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 56178 - 56106
Alignment:
Q  46 acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacaaatttagcaacaat 118  Q
    ||||||||||| |||| ||||| ||||||| || || ||| ||||| |||| |||||| |||||| |||||||    
T  56178 acaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 56106  T

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