View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9889_low_36 (Length: 222)
Name: NF9889_low_36
Description: NF9889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9889_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 240186 - 239970
Alignment:
| Q |
1 |
atttaaactccacaaccgataggttcctcacttttatccttttcctcattatcatcatcctcgttcttcttttcttgttcaattttctccaattgggtct |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
240186 |
atttaaactccacaaccgataggttcctcacttttatccttttcctcattatcatcatccttgttcttcttttcttgttcaattttctccaattgggtct |
240087 |
T |
|
| Q |
101 |
ctataacaatacttttgggtggctcaattggtgctttcttttcctttttcatagctttttccccaccattcctgtagattgcatacagtagcatctgaag |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
240086 |
ctataacaatacttttgggtggctcaattggtgctttcttttcctttttcatagctttttccccaccattcctgtagattgcatacagtagcatctgaag |
239987 |
T |
|
| Q |
201 |
taaccccaacacgaaac |
217 |
Q |
| |
|
||||||||| ||||||| |
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|
| T |
239986 |
taaccccaatacgaaac |
239970 |
T |
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