View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9891_low_2 (Length: 297)

Name: NF9891_low_2
Description: NF9891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9891_low_2
NF9891_low_2
[»] chr7 (18 HSPs)
chr7 (10-284)||(13882948-13883221)
chr7 (1-203)||(1217416-1217615)
chr7 (38-195)||(4303097-4303253)
chr7 (1-84)||(13886443-13886526)
chr7 (1-84)||(859412-859495)
chr7 (1-84)||(1220689-1220772)
chr7 (56-203)||(11001085-11001231)
chr7 (78-203)||(1369495-1369620)
chr7 (1-84)||(4300306-4300389)
chr7 (56-195)||(8915432-8915569)
chr7 (202-277)||(40691774-40691849)
chr7 (58-135)||(1786422-1786500)
chr7 (69-195)||(11228410-11228534)
chr7 (39-84)||(4888947-4888992)
chr7 (47-84)||(29175573-29175610)
chr7 (40-84)||(1883290-1883334)
chr7 (40-84)||(13466547-13466590)
chr7 (40-84)||(30217608-30217652)
[»] chr6 (18 HSPs)
chr6 (1-203)||(18203117-18203316)
chr6 (47-195)||(22873500-22873647)
chr6 (1-123)||(3541957-3542079)
chr6 (47-185)||(22888953-22889090)
chr6 (43-185)||(22910496-22910637)
chr6 (56-201)||(34374046-34374190)
chr6 (1-123)||(30049627-30049748)
chr6 (1-123)||(30051914-30052035)
chr6 (1-84)||(29341048-29341131)
chr6 (1-99)||(11194401-11194498)
chr6 (57-193)||(12881715-12881849)
chr6 (68-203)||(12778680-12778812)
chr6 (1-88)||(18726879-18726965)
chr6 (1-85)||(3535785-3535868)
chr6 (78-134)||(8047661-8047718)
chr6 (164-197)||(11194368-11194401)
chr6 (68-124)||(32361116-32361173)
chr6 (32-81)||(27822370-27822419)
[»] chr4 (9 HSPs)
chr4 (1-203)||(22716294-22716495)
chr4 (1-203)||(22988722-22988923)
chr4 (1-169)||(6659586-6659751)
chr4 (1-81)||(22691060-22691140)
chr4 (80-175)||(7634998-7635092)
chr4 (1-123)||(13085348-13085473)
chr4 (20-84)||(24667431-24667495)
chr4 (69-181)||(10494626-10494737)
chr4 (72-144)||(9260302-9260375)
[»] chr2 (18 HSPs)
chr2 (1-195)||(31635975-31636168)
chr2 (1-180)||(22011087-22011265)
chr2 (1-135)||(27952581-27952716)
chr2 (5-179)||(35681910-35682082)
chr2 (56-196)||(33053108-33053246)
chr2 (80-203)||(280297-280418)
chr2 (175-284)||(27952720-27952829)
chr2 (1-85)||(27956417-27956501)
chr2 (1-84)||(33655376-33655459)
chr2 (1-123)||(2165634-2165756)
chr2 (1-84)||(15129168-15129251)
chr2 (84-203)||(32162254-32162371)
chr2 (1-53)||(31633885-31633937)
chr2 (1-84)||(2155718-2155800)
chr2 (1-84)||(22264186-22264268)
chr2 (57-126)||(23457392-23457461)
chr2 (47-203)||(36648555-36648710)
chr2 (39-84)||(1517980-1518026)
[»] chr1 (12 HSPs)
chr1 (17-203)||(13441861-13442044)
chr1 (40-203)||(31915218-31915382)
chr1 (1-85)||(50857700-50857784)
chr1 (57-197)||(10927791-10927929)
chr1 (57-195)||(10926884-10927022)
chr1 (1-84)||(13444241-13444324)
chr1 (17-203)||(40805539-40805724)
chr1 (17-196)||(23988912-23989090)
chr1 (68-135)||(8966023-8966091)
chr1 (149-203)||(8220182-8220236)
chr1 (1-42)||(8931016-8931057)
chr1 (40-84)||(43681248-43681292)
[»] chr8 (11 HSPs)
chr8 (1-203)||(22512304-22512501)
chr8 (5-197)||(23573219-23573412)
chr8 (1-123)||(22922107-22922229)
chr8 (1-81)||(42891927-42892007)
chr8 (69-195)||(2688861-2688984)
chr8 (1-53)||(6845118-6845170)
chr8 (56-126)||(26377779-26377850)
chr8 (202-277)||(30955510-30955585)
chr8 (5-84)||(23570338-23570416)
chr8 (80-203)||(24577813-24577935)
chr8 (39-84)||(24730821-24730866)
[»] chr5 (6 HSPs)
chr5 (5-180)||(21845150-21845324)
chr5 (56-203)||(18252100-18252246)
chr5 (5-86)||(21849231-21849312)
chr5 (5-86)||(21857145-21857226)
chr5 (1-66)||(40779043-40779108)
chr5 (80-123)||(19677630-19677674)
[»] chr3 (9 HSPs)
chr3 (1-197)||(3063995-3064190)
chr3 (40-203)||(365846-366007)
chr3 (69-196)||(8536655-8536781)
chr3 (4-93)||(43304217-43304306)
chr3 (10-84)||(53012778-53012852)
chr3 (1-84)||(43306928-43307011)
chr3 (1-76)||(3069131-3069206)
chr3 (40-171)||(2472952-2473084)
chr3 (202-277)||(19319018-19319093)
[»] scaffold0054 (3 HSPs)
scaffold0054 (43-185)||(10349-10490)
scaffold0054 (69-204)||(48993-49127)
scaffold0054 (74-132)||(37465-37523)
[»] scaffold0110 (2 HSPs)
scaffold0110 (1-123)||(45873-45995)
scaffold0110 (1-42)||(46961-47002)
[»] scaffold0024 (2 HSPs)
scaffold0024 (70-203)||(144177-144312)
scaffold0024 (61-135)||(145481-145555)
[»] scaffold0240 (1 HSPs)
scaffold0240 (124-203)||(15685-15762)
[»] scaffold0242 (2 HSPs)
scaffold0242 (202-277)||(9005-9080)
scaffold0242 (202-277)||(11309-11384)


Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 10 - 284
Target Start/End: Original strand, 13882948 - 13883221
Alignment:
Q  10 agagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcg 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13882948 agagttctagaaaattactaagatttgactaaataataaatactactaaattactaataaaaccctcctgcatcagtctcgtccacctctaaagaactcg 13883047  T
Q  110 acccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatgaaataatgtg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13883048 acccgagttctcattctaataaagagattctcatgcatatgttggctcctccaataaacaagagaccaccctcctggatcccattgaatgaaataatgtg 13883147  T
Q  210 gaattggtgagcatgtgatcacaaaaatg-tttaagagcttcaaggttgaaatatgagtcccttgctgccaaccct 284  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  13883148 gaattggtgagcatgtgatcactaaaatgttttaagagcttcaaggttgaa--atgagtcccttgctgccaaccct 13883221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 1217416 - 1217615
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |     
T  1217416 taataatagaaagttctagaaaattactaagatttggctaaataataaatactactgaattactaataaaaccctcctgcatcagtctcctccacctttg 1217515  T
Q  101 aagaactcgacccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatga 200  Q
    ||||||||||||||||||| | || | ||||||||||| ||||||  |||| |  ||||||||| |||||||||||||||||||||||||||| ||||||    
T  1217516 aagaactcgacccgagttcacgttttgataaagagatt-tcatgc--atgtcgtgtcctccaattaacaagagaccaccctcctggatcccatagaatga 1217612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 38 - 195
Target Start/End: Complemental strand, 4303253 - 4303097
Alignment:
Q  38 ctaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagaga 136  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||| | ||||||||     
T  4303253 ctaaataataaatactactaaattactaataaaaccctcctacatcagtctcctccacctctgaagaactcgatcccgagttctcattttgataaagagc 4303154  T
Q  137 ttctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattg 195  Q
    ||| |||||  |||| | |||||||||||||||||||  ||||| || |||||||||||    
T  4303153 ttcccatgc--atgtcgactcctccaatgaacaagagcacacccacccggatcccattg 4303097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13886443 - 13886526
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  13886443 taataatagagagttctagaaaattactaagatttgactaaataataaatactactaaattactaataaaacccttctgcatca 13886526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 859412 - 859495
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  859412 taataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaatcctcctgcatca 859495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1220689 - 1220772
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  1220689 taataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaatcctcctgcatca 1220772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 11001085 - 11001231
Alignment:
Q  56 taaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttgg 154  Q
    |||| ||||||  |||||||||| |||||||||||||||||||| |||||||||| ||| | |||||||| | |||||||| ||| |||||  |||||      
T  11001085 taaaatactaaggaaaccctcctacatcagtctcctccacctctgaagaactcgaccccaaattctcattgtgataaagagcttcccatgc--atgttaa 11001182  T
Q  155 ctcctccaatgaacaagagaccaccctcctggatcccattgaatgaaat 203  Q
    ||||||||||||| |||||| || |||||||||||||||||| ||||||    
T  11001183 ctcctccaatgaaaaagagatcatcctcctggatcccattgagtgaaat 11001231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 1369620 - 1369495
Alignment:
Q  78 tgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaac-aagagac 175  Q
    ||||| |||||||||||||||| |||||||||| |||||||||| ||||| |||||||| ||| ||||   |||||| |||||||||||||| ||| |||    
T  1369620 tgcatgagtctcctccacctctgaagaactcgagcccgagttcttattctgataaagagcttcccatg--aatgttgactcctccaatgaacaaagcgac 1369523  T
Q  176 caccctcctggatcccattgaatgaaat 203  Q
    ||||||||  ||||||||||||||||||    
T  1369522 caccctccacgatcccattgaatgaaat 1369495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4300389 - 4300306
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    ||||||||||||||| |||||||| |||| | |||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  4300389 taataatagagagttttagaaaattactatgttttggctaaataataaatactactaaattactaataaaaccctcctacatca 4300306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 195
Target Start/End: Original strand, 8915432 - 8915569
Alignment:
Q  56 taaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttgg 154  Q
    |||| ||||||  |||||||||| ||||||||||||||| |||| ||||||| || ||||| |||||||||||||||| ||  || |||||  ||||||     
T  8915432 taaaatactaaggaaaccctcctacatcagtctcctccatctctgaagaactagaccccgaattctcattctaataaaaag-ctcccatgc--atgttga 8915528  T
Q  155 ctcctccaatgaacaagagaccaccctcctggatcccattg 195  Q
    ||||||| ||||||||||||||| ||| || ||| ||||||    
T  8915529 ctcctccgatgaacaagagaccaaccttctagatgccattg 8915569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 40691849 - 40691774
Alignment:
Q  202 ataatgtggaattggtgagcatgtgatcacaaaaatgtttaagagcttcaaggttgaaatatgagtcccttgctgc 277  Q
    |||||||||||| |  |||||||||||||| ||||| |||||||||||||||| |||||||||  |||||||||||    
T  40691849 ataatgtggaatggaagagcatgtgatcactaaaatatttaagagcttcaaggctgaaatatgcatcccttgctgc 40691774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 1786500 - 1786422
Alignment:
Q  58 aattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgacc-cgagttctcattctaataaagag 135  Q
    ||||||||| |||||| |||| ||| |||||||||||||||| |||||||||||| |||||||||||| | ||||||||    
T  1786500 aattactaagaaaaccttcctacatgagtctcctccacctctgaagaactcgacctcgagttctcattttgataaagag 1786422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 11228534 - 11228410
Alignment:
Q  69 aaaccctcctgcatcagtctcctccacctctaaagaactcgaccc-gagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaa 167  Q
    ||||| |||| ||||||||| |||| ||||| ||||||| | ||| |||||||||||||||||||||  ||| |||||  ||| || |||||  ||||||    
T  11228534 aaaccatcctacatcagtcttctcc-cctcttaagaacttgcccccgagttctcattctaataaagaacttcccatgc--atgatgactcctataatgaa 11228438  T
Q  168 caagagaccaccctcctggatcccattg 195  Q
    |||||||| |||||| |||||| |||||    
T  11228437 caagagactaccctcttggatctcattg 11228410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 4888947 - 4888992
Alignment:
Q  39 taaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||    
T  4888947 taaataataaatactactaaattactaataaaattctcctgcatca 4888992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 29175610 - 29175573
Alignment:
Q  47 aaatacttctaaattactaataaaaccctcctgcatca 84  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29175610 aaatactactaaattactaataaaaccctcctgcatca 29175573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 1883334 - 1883290
Alignment:
Q  40 aaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||||||| |||| ||||||||||||||||||| |||||    
T  1883334 aaataataaatactactaagttactaataaaaccctcctacatca 1883290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 13466590 - 13466547
Alignment:
Q  40 aaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||    
T  13466590 aaataataaatacaactaaattacta-taaaaccctcctgcatca 13466547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 30217652 - 30217608
Alignment:
Q  40 aaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||||||| |||||||| | ||||||||||| |||||||    
T  30217652 aaataataaatactactaaattagttataaaaccctcttgcatca 30217608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 5e-59; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18203316 - 18203117
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||| | ||| ||||||| ||||||||||||||||||||     
T  18203316 taataatagagagttctagaaaattactaagatttgactaaataataaatactataaaattactgagaaa-ccctcctacatcagtctcctccacctctg 18203218  T
Q  101 aagaactcgacccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatga 200  Q
    |||||||||||||||||||||||| |||||||||| ||  |||||  |||||| |||||| ||||||||||||||||||||||| ||||||||| | |||    
T  18203217 aagaactcgacccgagttctcattttaataaagagttttccatgc--atgttgactcctcgaatgaacaagagaccaccctcctagatcccattcagtga 18203120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 22873647 - 22873500
Alignment:
Q  47 aaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctcatgc 145  Q
    |||||||  ||||||| ||| ||||||||||| |||||||||| ||||||||||| ||| |||| ||| |||||||||| | |||||||| ||| |||||    
T  22873647 aaatactaataaattattaagaaaaccctcctacatcagtctcatccacctctaaggaaatcgatcccaagttctcattatgataaagagcttcccatgc 22873548  T
Q  146 atatgttggctcctccaatgaacaagagaccaccctcctggatcccattg 195  Q
    ||||  || ||||||||||||||||||||| |||||||||||||||||||    
T  22873547 atat--tgactcctccaatgaacaagagacaaccctcctggatcccattg 22873500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 3542079 - 3541957
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||||| |||||||||||||||  | ||||||||  ||||||||||  || ||||||| ||||||||||||||||||||     
T  3542079 taataatagaaagttctagaaaatcattaagatttgactaaaata-aaatactttaaaattactaaggaagccctcctacatcagtctcctccacctctg 3541981  T
Q  101 aagaactcga-cccgagttctcat 123  Q
    |||||||||| |||||||||||||    
T  3541980 aagaactcgaccccgagttctcat 3541957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 185
Target Start/End: Complemental strand, 22889090 - 22888953
Alignment:
Q  47 aaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctcatgc 145  Q
    |||||||  ||||||||||| ||||||||||| |||||||||| ||||||||||| ||| | || ||| |||||||||| | |||||||| ||| |||||    
T  22889090 aaatactaataaattactaagaaaaccctcctacatcagtctcatccacctctaaggaaatagaccccaagttctcattatgataaagagcttcccatgc 22888991  T
Q  146 atatgttggctcctccaatgaacaagagaccaccctcctg 185  Q
    |||  ||| ||||||||||||||||||||| |||||||||    
T  22888990 ata--ttgactcctccaatgaacaagagacaaccctcctg 22888953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 22910637 - 22910496
Alignment:
Q  43 taataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctc 141  Q
    |||||||||||  ||||||||||| ||||||||||| |||||||||| ||||||||||| ||| | || ||| |||||||||| | |||||||| ||| |    
T  22910637 taataaatactaataaattactaagaaaaccctcctacatcagtctcatccacctctaaggaaatagaccccaagttctcattatgataaagagcttccc 22910538  T
Q  142 atgcatatgttggctcctccaatgaacaagagaccaccctcctg 185  Q
    |||  ||| ||| ||||||||||||||||||||| |||||||||    
T  22910537 atg--tatattgactcctccaatgaacaagagacaaccctcctg 22910496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 201
Target Start/End: Original strand, 34374046 - 34374190
Alignment:
Q  56 taaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgaccc-gagttctcattctaataaagagattctcatgcatatgttgg 154  Q
    |||| ||||||  |||||||| | ||| |||||||||||| ||| |||||||| |||| ||||||||||| | |||||||||||| |||||||  ||||     
T  34374046 taaaatactaaggaaaccctcttacattagtctcctccacatctgaagaactccaccccgagttctcattttgataaagagattcccatgcat--gttga 34374143  T
Q  155 ctcctccaatgaacaagagaccaccctcctggatcccattgaatgaa 201  Q
    ||| |||||||||||||||||||| ||| ||||||||||||| ||||    
T  34374144 ctcttccaatgaacaagagaccactctcttggatcccattgagtgaa 34374190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 30049748 - 30049627
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||||||||| ||||| ||||| ||  ||||||   ||||||||||  || ||||||| ||||||||||||||||||||     
T  30049748 taataatagaaagttctagaaaatcactaaaatttggctaaaaaa--aatactataaaattactaaggaagccctcctacatcagtctcctccacctctg 30049651  T
Q  101 aagaactcga-cccgagttctcat 123  Q
    |||||||||| |||||||||||||    
T  30049650 aagaactcgaccccgagttctcat 30049627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 30052035 - 30051914
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||||||||| ||||| ||||| ||  ||||||   ||||||||||  || ||||||| ||||||||||||||||||||     
T  30052035 taataatagaaagttctagaaaatcactaaaatttggctaaaaaa--aatactataaaattactaaggaagccctcctacatcagtctcctccacctctg 30051938  T
Q  101 aagaactcga-cccgagttctcat 123  Q
    |||||||||| |||||||||||||    
T  30051937 aagaactcgaccccgagttctcat 30051914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 29341048 - 29341131
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||| |||| |||||||| ||||||||||| ||||| |||||||||| |||||||||||||||||||||||| |||||    
T  29341048 taataatagaaagttttagaaaattactaagatttggctaaaaaataaatactactaaattactaataaaaccctcctacatca 29341131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11194498 - 11194401
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctct 99  Q
    ||||| |||| ||||||||||||| ||||||||||| |||||  | ||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||    
T  11194498 taatactagaaagttctagaaaattactaagatttggctaaaata-aaatactactaaattactaagaaaactctcctacatcagtctcctccacctct 11194401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 193
Target Start/End: Complemental strand, 12881849 - 12881715
Alignment:
Q  57 aaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgaccc-gagttctcattctaataaagagattctcatgcatatgttggc 155  Q
    ||||||||||  |||||||||| ||||||||||||||||||   ||||||||||||| ||| ||||||||  |||| ||  ||| |||||||  |||| |    
T  12881849 aaattactaaggaaaccctcctacatcagtctcctccacctaagaagaactcgaccccgagctctcattccgataa-gaacttcccatgcat--gttgac 12881753  T
Q  156 tcctccaatgaacaagagaccaccctcctggatcccat 193  Q
    | || |||||||||||||||||||||||||||||||||    
T  12881752 ttcttcaatgaacaagagaccaccctcctggatcccat 12881715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 12778680 - 12778812
Alignment:
Q  68 aaaaccctcctgcatcagtctcctccacctctaaagaactcgacccgag-ttctcattctaataaagagattctcatgcatatgttggctcctccaatga 166  Q
    ||||||||| | |||||||||||||||||||| ||||||| ||||| |  |||||||||| |||  ||| |||   |||||  |||| ||||||||||||    
T  12778680 aaaaccctcttacatcagtctcctccacctctgaagaacttgaccccaaattctcattctgata--gagtttcctttgcat--gttgactcctccaatga 12778775  T
Q  167 acaagagaccaccctcctggatcccattgaatgaaat 203  Q
    ||||||||| |||||| ||||||||||| | ||||||    
T  12778776 acaagagacaaccctcttggatcccattaagtgaaat 12778812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18726965 - 18726879
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtct 88  Q
    |||||||||| ||||||||||||| ||||||||||| ||||| |  ||| |||   |||||||||| |||||||||||||||||||||    
T  18726965 taataatagaaagttctagaaaatgactaagatttggctaaa-ataaaaaactataaaattactaaaaaaaccctcctgcatcagtct 18726879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3535868 - 3535785
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcag 85  Q
    |||||||||| ||||||||||||||| ||||||||||||||| |  ||||||||  ||||||||||  || ||||||| ||||||    
T  3535868 taataatagaaagttctagaaaatcattaagatttgactaaa-ataaaatactttaaaattactaaggaagccctcctacatcag 3535785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 8047661 - 8047718
Alignment:
Q  78 tgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaaga 134  Q
    |||||| ||||||||||||||| ||||||| || |||||||||| |||||||||||||    
T  8047661 tgcatcggtctcctccacctctgaagaacttgaccccgagttctaattctaataaaga 8047718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 11194401 - 11194368
Alignment:
Q  164 tgaacaagagaccaccctcctggatcccattgaa 197  Q
    ||||||||||||||||||||||||||||||||||    
T  11194401 tgaacaagagaccaccctcctggatcccattgaa 11194368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 32361173 - 32361116
Alignment:
Q  68 aaaaccctcctgcatcagtctcctccacctctaaagaactcgacc-cgagttctcatt 124  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||||||| ||||||||||||    
T  32361173 aaaaccctcctacattagtcttctccacctctaaaaaactcgacctcgagttctcatt 32361116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 27822370 - 27822419
Alignment:
Q  32 atttgactaaataataaatacttctaaattactaataaaaccctcctgca 81  Q
    |||||||||||  | |||||||  ||||||||||||||||||||||||||    
T  27822370 atttgactaaaataaaaatactattaaattactaataaaaccctcctgca 27822419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 7e-55; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22716495 - 22716294
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||| | ||||||||| ||||||||||||||||  ||||||||||||||||| |  |||||||||||||||||| |||||    
T  22716495 taataatagaaagttctagaaaattattaagatttggctaaataataaatactattaaattactaataaaactcaactgcatcagtctcctccagctcta 22716396  T
Q  101 aagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatg 199  Q
    |||||||||| |||||||||||||| | |||||||| ||| ||| |  |||||| ||||||||||||||||||||||||||||||| ||| |||||| ||    
T  22716395 aagaactcgaccccgagttctcattttgataaagagcttcccattc--atgttgactcctccaatgaacaagagaccaccctcctgaatcacattgagtg 22716298  T
Q  200 aaat 203  Q
    ||||    
T  22716297 aaat 22716294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22988722 - 22988923
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||| | ||||||||| ||||||||||||||||  ||||||||||||||||| |  |||||||||||||||||| |||||    
T  22988722 taataatagaaagttctagaaaattattaagatttggctaaataataaatactattaaattactaataaaactcaactgcatcagtctcctccagctcta 22988821  T
Q  101 aagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatg 199  Q
    |||||||||| |||||||||||||| | |||||||| ||| ||| |  |||||| ||||||||||||||||||||||||||||||| ||| |||||| ||    
T  22988822 aagaactcgaccccgagttctcattttgataaagagcttcccattc--atgttgactcctccaatgaacaagagaccaccctcctgaatcacattgagtg 22988919  T
Q  200 aaat 203  Q
    ||||    
T  22988920 aaat 22988923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6659586 - 6659751
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||   ||||||||||  |||||||||| ||||||||||||| ||||||     
T  6659586 taataatagaaagttctagaaaattactaagatttggctaaataataaatactgtaaaattactaa-gaaaccctcctacatcagtctcctctacctctg 6659684  T
Q  101 aagaactcgacccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaaca 169  Q
    ||||||||||||| | |||||||  | |||||||| ||| |||| |||  ||| ||||||||| |||||    
T  6659685 aagaactcgacccaaattctcatcttgataaagagcttcccatgaata--ttgactcctccaaagaaca 6659751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22691140 - 22691060
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgca 81  Q
    |||||||| | ||||||||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  22691140 taataatacaaagttctagaaaattactaagatttggctaaataataaatactactaaattattaataaaaccctcctgca 22691060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 7635092 - 7634998
Alignment:
Q  80 catcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagac 175  Q
    ||||||||||||||| |||| |||||||||| ||| | |||||||||||||||| || | | |||||  |||||| ||||||| |||||||||||||    
T  7635092 catcagtctcctccatctctgaagaactcgaccccaaattctcattctaataaaaagctccccatgc--atgttgactcctccgatgaacaagagac 7634998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 13085348 - 13085473
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaa---ccctcctgcatcagtctcctccacct 97  Q
    |||||||||| |||||||||| || |||||||| || |||||  | |||||||   |||||||||| ||||   ||||||| |||||||||| |||| ||    
T  13085348 taataatagaaagttctagaatattactaagatgtggctaaaata-aaatactataaaattactaaaaaaaacaccctcctacatcagtctcttccatct 13085446  T
Q  98 ctaaagaactcga-cccgagttctcat 123  Q
    || |||||||||| |||||||||||||    
T  13085447 ctgaagaactcgaccccgagttctcat 13085473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 24667495 - 24667431
Alignment:
Q  20 aaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    ||||| |||| |||||| ||||||||||| |||| |||||||| ||||||| |||||||||||||    
T  24667495 aaaattactacgatttggctaaataataactactactaaattaataataaagccctcctgcatca 24667431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 10494737 - 10494626
Alignment:
Q  69 aaaccctcctgcatcagtctcctccacctctaaagaactcgacc-cgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaa 167  Q
    |||||||| | ||||||||| ||| || ||| |||||||||||| | |||||| || || ||||| || ||| |||||||  || | |||||||||||||    
T  10494737 aaaccctcatacatcagtcttctctacttctgaagaactcgacctcaagttctgatcctgataaatagcttcccatgcat--gtcgactcctccaatgaa 10494640  T
Q  168 caagagaccaccct 181  Q
    ||||||||||||||    
T  10494639 caagagaccaccct 10494626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 9260375 - 9260302
Alignment:
Q  72 ccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctcatg 144  Q
    ||||| ||||||| ||||||| || |||||||||||||| |||||||||| ||| | |||||||  ||||||||    
T  9260375 ccctcatgcatcaatctcctctacgtctaaagaactcgaccccgagttcttattttgataaagaacttctcatg 9260302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 7e-55; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 31636168 - 31635975
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||     
T  31636168 taataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaaccctcctacatcagtctcctccacctctg 31636069  T
Q  101 aagaactcg-acccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattg 195  Q
    ||||||||| | |||||||||||||   |||||||| ||| |||||  |||||| |||||||||||||||||||  ||||| || |||||||||||    
T  31636068 aagaactcgaatccgagttctcatttagataaagagtttcccatgc--atgttgactcctccaatgaacaagagcacacccacccggatcccattg 31635975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 22011265 - 22011087
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||| ||||||||   ||||||||||||||||||| |||||||||||||||    
T  22011265 taataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattaaagataaaaccctcctgcatcactctcctccacctcta 22011166  T
Q  101 aagaactcgaccc-gagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccc 180  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||  ||||||| ||||| | |||||||||| |||||||    
T  22011165 aagaactcgaccctgagttctcattctaataaagaatttctcatg--tatgttgactccttcgatgaacaagataccaccc 22011087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27952581 - 27952716
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||| |||||||||||  ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||     
T  27952581 taataatagaaagttctagaaaattactaagatttggataaataataaatactactaaattattaataaaaccctcctacatcagtctcctccacctctg 27952680  T
Q  101 aagaactcga-cccgagttctcattctaataaagag 135  Q
    |||||||||| |||||||||||||||| ||||||||    
T  27952681 aagaactcgaccccgagttctcattctgataaagag 27952716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 35682082 - 35681910
Alignment:
Q  5 aatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaaga 104  Q
    |||||| ||||||||||||| ||||||||||| |||||  | |||||||   |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  35682082 aatagaaagttctagaaaattactaagatttggctaaaata-aaatactataaaattactaagaaaaccctcctgcatcagtctcctccacctctgaaga 35681984  T
Q  105 actcga-cccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccacc 179  Q
    |||||| ||| ||||||| |||| |||||||| ||   ||||  |||||| ||||| |||||||||||||||||||    
T  35681983 actcgaccccaagttctctttctgataaagagctttctatgc--atgttgactccttcaatgaacaagagaccacc 35681910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 33053246 - 33053108
Alignment:
Q  56 taaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgacccgagttctcattctaataaagagattctcatgcatatgttggc 155  Q
    |||| ||||||  ||||||| || |||||||||||||||||||| |||||||||||||  ||||| |||||||||||||| ||||||| |  |||| | |    
T  33053246 taaaatactaaggaaacccttctacatcagtctcctccacctctgaagaactcgaccccggttcttattctaataaagagcttctcattc--atgtcgac 33053149  T
Q  156 tcctccaatgaacaagagaccaccctcctggatcccattga 196  Q
    ||||| ||| |||||||||||||||||||| ||||||||||    
T  33053148 tcctctaataaacaagagaccaccctcctgaatcccattga 33053108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 80 - 203
Target Start/End: Original strand, 280297 - 280418
Alignment:
Q  80 catcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccac 178  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| ||| |||||  ||||||  ||||||||||||| ||||||||     
T  280297 catcagtctcctccacctctgaagaactcgaccccgagttctcattctgataaagagcttcacatgc--atgttgaatcctccaatgaac-agagaccat 280393  T
Q  179 cctcctggatcccattgaatgaaat 203  Q
    ||| |||||||||||||| ||||||    
T  280394 ccttctggatcccattgagtgaaat 280418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 27952720 - 27952829
Alignment:
Q  175 ccaccctcctggatcccattgaatgaaataatgtggaattggtgagcatgtgatcacaaaaatgtttaagagcttcaaggttgaaatatgagtcccttgc 274  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||||||||| || |||||  || |||||||||||| ||| |||||| ||||||||    
T  27952720 ccaccctcctagatcccattgattgaagtaatgtggaattggtgagcatgtgattactaaaatacttgagagcttcaaggctgatatatgaatcccttgc 27952819  T
Q  275 tgccaaccct 284  Q
    ||||| ||||    
T  27952820 tgccagccct 27952829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 27956417 - 27956501
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcag 85  Q
    |||||||||| ||||||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  27956417 taataatagaaagttctagaaaattactaagatttggataaataataaatactactaaattactaataaaaccctcctacatcag 27956501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33655459 - 33655376
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  33655459 taataatagaaagttctagaaaattactaagatttggctaaataatagatactactaaattaccaataaaaccctcctgcatca 33655376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 2165756 - 2165634
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||| | ||||||| |||||||||||||||||||||||  | |||||||   ||||||||||  |||| ||||| ||||||||||||||||||||     
T  2165756 taataatacaaagttctaaaaaatcactaagatttgactaaaata-aaatactataaaattactaaggaaactctcctacatcagtctcctccacctctg 2165658  T
Q  101 aagaactcga-cccgagttctcat 123  Q
    |||||||||| |||||||||||||    
T  2165657 aagaactcgaccccgagttctcat 2165634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15129251 - 15129168
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||  ||||||||||||| |||||||||||  ||||||||||||||| |||||||| |||||||||||||||||||||    
T  15129251 taataataggaagttctagaaaattactaagatttggttaaataataaatactactaaattattaataaaaccctcctgcatca 15129168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 203
Target Start/End: Original strand, 32162254 - 32162371
Alignment:
Q  84 agtctcctccacctctaaagaactcgaccc-gagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctc 182  Q
    ||||||||||| |||| || ||||| |||  ||||||||||||| |||||||| ||| |||||||  |||| ||| || |||||||||||||||||||||    
T  32162254 agtctcctccatctctgaaaaactcaaccttgagttctcattctgataaagagcttcccatgcat--gttgactc-tctaatgaacaagagaccaccctc 32162350  T
Q  183 ctggatcccattgaatgaaat 203  Q
    || ||||||||||| ||||||    
T  32162351 cttgatcccattgagtgaaat 32162371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31633937 - 31633885
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatact 53  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  31633937 taataatagaaagttctagaaaattactaagatttggctaaataataaatact 31633885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2155800 - 2155718
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||| ||||||||||||||||||||||||||||||| |  |||||||   ||||||||||  |||||||||| |||||    
T  2155800 taataatagaaagttctagaaaatcactaagatttgactaaa-ataaaatactataaaattactaaggaaaccctcctacatca 2155718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22264268 - 22264186
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||| ||||||||||||| ||||||||||| ||||| |  ||||||| |||||||||||| |||| ||| ||||||||    
T  22264268 taataatagaaagttctagaaaattactaagatttggctaaa-ataaaatactactaaattactaagaaaatccttctgcatca 22264186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 23457461 - 23457392
Alignment:
Q  57 aaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactc-gacccgagttctcattct 126  Q
    |||||||||| |||||| |||| |||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  23457461 aaattactaagaaaacc-tcctacatcagtcgcctccacctctgaagaactctgacccgagttctcattct 23457392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 203
Target Start/End: Complemental strand, 36648710 - 36648555
Alignment:
Q  47 aaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgac-ccgagttctcattctaat-aaagagattctcatg 144  Q
    |||||||  |||||||||||  |||||||||| ||| ||||||||||| || | ||||||||||| || ||||||  |||| || |||| | ||| ||||    
T  36648710 aaatactaataaattactaaggaaaccctcctacatgagtctcctccatctatgaagaactcgactcccagttcttgttctgataaaagtgcttc-catg 36648612  T
Q  145 catatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatgaaat 203  Q
    |  ||| || ||| ||||||||| |||||||||||||| | ||||| ||||| ||||||    
T  36648611 c--atgatgactcttccaatgaataagagaccaccctcttagatcctattgattgaaat 36648555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 1518026 - 1517980
Alignment:
Q  39 taaataataaa-tacttctaaattactaataaaaccctcctgcatca 84  Q
    ||||||||||| |||| |||||||||||| |||||||||||||||||    
T  1518026 taaataataaaatactactaaattactaagaaaaccctcctgcatca 1517980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 13441861 - 13442044
Alignment:
Q  17 tagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgacccgag 116  Q
    |||||||| |||| |||||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||  | ||    
T  13441861 tagaaaattactatgatttggctaaataataaatactactaaattactaacaaaacccttctgcatcagtctcctccacctctgaagaattcga-tcaag 13441959  T
Q  117 ttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatgaaat 203  Q
    |||||||||| |||||||| ||| |||||  |||||| |||||||||||| ||||||| || |||||||||||||||||| ||||||    
T  13441960 ttctcattctgataaagagcttcccatgc--atgttgactcctccaatgagcaagagatcatcctcctggatcccattgagtgaaat 13442044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 31915382 - 31915218
Alignment:
Q  40 aaataataaatacttctaaattactaataaaaccctcctgcatcagtctc---ctccacctctaaagaactcga-cccgagttctcattctaataaagag 135  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||   |||||||||| |||||||| | ||||||||||| ||||||| |||||    
T  31915382 aaataataaatactactaaattactaataaaaccctcatgcatcagtctcctcctccacctctgaagaactcaaccccgagttctcgttctaat-aagag 31915284  T
Q  136 attctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatgaaat 203  Q
     ||  ||| ||| ||||| ||||||||||||||||||||| | |||||||||||| ||||| ||||||    
T  31915283 ttttccattcat-tgttgactcctccaatgaacaagagacta-cctcctggatccgattgagtgaaat 31915218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 50857700 - 50857784
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcag 85  Q
    |||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  50857700 taataatagaaagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaaccctcctgcatcag 50857784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 10927929 - 10927791
Alignment:
Q  57 aaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttggc 155  Q
    ||||||||||  |||||||||| || ||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||||  | |||| |    
T  10927929 aaattactaaggaaaccctcctacaacagtctcctccacttctgaagaactcgaccccgagttctcattctaataaagagtttctcatgc--aagttgac 10927832  T
Q  156 tcctccaatgaacaagagaccaccctcctggatcccattgaa 197  Q
    || | |||| ||||||||||| ||||||| ||||||||||||    
T  10927831 tcttacaataaacaagagacc-ccctcctagatcccattgaa 10927791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 10927022 - 10926884
Alignment:
Q  57 aaattactaat-aaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttgg 154  Q
    ||||||||||| |||| | |||| |||||||||||||||||||| |||||||||| |||||||||||||||| |||||||  ||| |||||  ||||||     
T  10927022 aaattactaatgaaaatcatcctacatcagtctcctccacctctgaagaactcgaccccgagttctcattctgataaagaacttcccatgc--atgttga 10926925  T
Q  155 ctcctccaatgaacaagagaccaccctcctggatcccattg 195  Q
    ||||||||||||| |||||| || |||| |||  |||||||    
T  10926924 ctcctccaatgaataagagatcatcctcttggtacccattg 10926884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13444241 - 13444324
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||| | |||| |||||| ||||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  13444241 taataatagaaaattcttgaaaattactaaaatttggctaaataataaatactactaaattactaataaaatcctcctgcatca 13444324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 40805724 - 40805539
Alignment:
Q  17 tagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgaccc-ga 115  Q
    |||||| | ||||| ||| |||||||  | ||||||| | |||||| |||  ||||  |||| |||||||||||||||||| ||||||| ||||||| ||    
T  40805724 tagaaagttactaaaattagactaaaataaaaatactacaaaattaataaggaaactatcctacatcagtctcctccacctttaaagaagtcgaccccga 40805625  T
Q  116 gttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatgaaat 203  Q
    |||||  |||| |||| ||| ||| |||||||  | || ||||||| ||||||||| || |||||||||| ||| |||||||||||||    
T  40805624 gttcttgttctgataaggagtttcacatgcat--gatgactcctccgatgaacaagggatcaccctcctgaatctcattgaatgaaat 40805539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 196
Target Start/End: Complemental strand, 23989090 - 23988912
Alignment:
Q  17 tagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgacc-cga 115  Q
    |||||||| ||||| ||||| |||||  | |||||||   ||||||||||  |||||||||| ||| |||||||| ||||||| ||||||||||||  ||    
T  23989090 tagaaaattactaaaatttggctaaaataaaaatactatgaaattactaaggaaaccctcctacattagtctcctacacctctgaagaactcgaccttga 23988991  T
Q  116 gttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattga 196  Q
    |||||| || |  ||||||| ||| | |||  |||||  ||||| |||||| ||||||| |||||| ||||||||||||||    
T  23988990 gttctcgttttggtaaagagcttcccttgc--atgttaactccttcaatgagcaagagatcacccttctggatcccattga 23988912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 8966023 - 8966091
Alignment:
Q  68 aaaaccctcctgcatcagtctcctccacctctaaagaactcgaccc-gagttctcattctaataaagag 135  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  8966023 aaaaccttcctacatcagtctcctccacctctgaagaactcgaccctgagttctcattctgataaagag 8966091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 8220236 - 8220182
Alignment:
Q  149 tgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatgaaat 203  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  8220236 tgttgactcctccagtgaacaagagacgaccctcctggatcccattgagtgaaat 8220182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8931057 - 8931016
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaa 42  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  8931057 taataatagaaagttctagaaaatcactaagatttgactaaa 8931016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 43681292 - 43681248
Alignment:
Q  40 aaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||    
T  43681292 aaataataaatactactaaattactaataaaaccatcctacatca 43681248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22512304 - 22512501
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||| | ||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  22512304 taataatataaagttctagaaaattactaagatttagctaaataataaatactactaaattactaataaaactctcctgcatcagtctcctccacctcta 22512403  T
Q  101 aagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatg 199  Q
    |||||||||| |||||||||| ||||| ||||  || ||| |      |||||| ||| ||||| |||||  ||||| ||||||||||||||||||| ||    
T  22512404 aagaactcgaccccgagttcttattctgataagaagcttccc------atgttgactcatccaacgaacataagaccgccctcctggatcccattgagtg 22512497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 23573412 - 23573219
Alignment:
Q  5 aatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaaga 104  Q
    |||||| ||||||||||||| |||||||||||  |||||||||||||||   ||||||||||  ||||||| || ||| |||||||||||||||| ||||    
T  23573412 aatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaa-gaaacccttctacattagtctcctccacctctgaaga 23573314  T
Q  105 actcgaccc-gagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagag---accaccctcctggatcccattgaa 197  Q
    ||||||||| ||||| ||||| | |||||||| ||| |||||  |||||| |||||||||||||||| ||   ||||||||||||| ||||||||||    
T  23573313 actcgacccggagttttcattttgataaagagcttcccatgc--atgttgactcctccaatgaacaaaagaccaccaccctcctggttcccattgaa 23573219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 22922107 - 22922229
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |  |||||||   ||||||||||  || ||||||| ||||||||||||||||||||     
T  22922107 taataatagaaagttctagaaaatcactaagatttgactaaa-ataaaatactataaaattactaaggaagccctcctacatcagtctcctccacctctg 22922205  T
Q  101 aagaactcga-cccgagttctcat 123  Q
    |||||||||| |||||||||||||    
T  22922206 aagaactcgaccccgagttctcat 22922229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42891927 - 42892007
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgca 81  Q
    |||||||||| ||||||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||||||||||||    
T  42891927 taataatagaaagttctagaaaattactaagatttggttaaataataaatactactaaattactaataaaaccctcctgca 42892007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 195
Target Start/End: Complemental strand, 2688984 - 2688861
Alignment:
Q  69 aaaccctcctgcatcagtctcctccacctctaaagaactcgacc-cgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaa 167  Q
    |||||||||| ||| |||||||||||||| | |||||||||| | ||||||||||||||||||  ||| ||| |||||||  |||| |||||||||||||    
T  2688984 aaaccctcctacatgagtctcctccacctatgaagaactcgatcacgagttctcattctaata--gagtttcccatgcat--gttgactcctccaatgaa 2688889  T
Q  168 caagagaccaccctcctggatcccattg 195  Q
    || |||| ||||||| ||||||||||||    
T  2688888 catgagatcaccctcatggatcccattg 2688861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6845170 - 6845118
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatact 53  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  6845170 taataatagagagttttagaaaattactaagatttgactaaataataaatact 6845118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 26377850 - 26377779
Alignment:
Q  56 taaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattct 126  Q
    ||||||||||| ||||||||||| |||||||||||||||||| | |||||||||| ||| ||||||||||||    
T  26377850 taaattactaagaaaaccctcctacatcagtctcctccacctttgaagaactcgaccccaagttctcattct 26377779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 30955510 - 30955585
Alignment:
Q  202 ataatgtggaattggtgagcatgtgatcacaaaaatgtttaagagcttcaaggttgaaatatgagtcccttgctgc 277  Q
    |||||||||||| |  |||||||||||||| ||||| |||||||||||||||| |||||||||  |||||||||||    
T  30955510 ataatgtggaatggaagagcatgtgatcactaaaatatttaagagcttcaaggctgaaatatgcatcccttgctgc 30955585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 23570416 - 23570338
Alignment:
Q  5 aatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||   ||||||||||  |||||||||| |||||    
T  23570416 aatagaaagttctagaaaattactaagatttgattaaataataaatactataaaattactaa-gaaaccctcctacatca 23570338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 203
Target Start/End: Original strand, 24577813 - 24577935
Alignment:
Q  80 catcagtctcctccacctctaaagaactcgaccc-gagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccac 178  Q
    |||||||||||||||| ||| ||||| ||||||  |||||||| |||| ||| |||  ||| | ||||||| |   |||||||||| ||||||||||||     
T  24577813 catcagtctcctccacttctgaagaattcgaccttgagttctccttctgatacagaacttcgcttgcatattta--ctcctccaataaacaagagaccat 24577910  T
Q  179 cctcctggatcccattgaatgaaat 203  Q
    |||||| ||||||||||| ||||||    
T  24577911 cctcctagatcccattgactgaaat 24577935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 24730866 - 24730821
Alignment:
Q  39 taaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  24730866 taaatcataaatactactaaattactaataaaaccctcctgcatca 24730821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 180
Target Start/End: Original strand, 21845150 - 21845324
Alignment:
Q  5 aatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaaga 104  Q
    |||||| ||||||||||||| |||||||||||  |||||||||||||||   |||||||||| ||||||||| |||||||||||  ||||||||| ||||    
T  21845150 aatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaagaaaaccctcttgcatcagtctgttccacctctgaaga 21845249  T
Q  105 actcga-cccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccc 180  Q
    |||||| |||||||||||||||| |||||||| ||| |||||  |||||| |||||||||||||||||| |||||||    
T  21845250 actcgaccccgagttctcattctgataaagagcttcccatgc--atgttgactcctccaatgaacaagaaaccaccc 21845324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 56 - 203
Target Start/End: Complemental strand, 18252246 - 18252100
Alignment:
Q  56 taaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgaccc-gagttctcattctaataaagagattctcatgcatatgttgg 154  Q
    |||| ||||||  ||||||||||||||||| |||||| |||||| ||||||| ||||| ||||||||||| | ||||| || ||  ||||||| ||  |     
T  18252246 taaaatactaaggaaaccctcctgcatcagcctcctctacctctgaagaacttgaccccgagttctcattatgataaacagctttccatgcatgtg--ga 18252149  T
Q  155 ctcctccaatgaacaagagaccaccctcctggatcccattgaatgaaat 203  Q
    ||||||||||| ||||||||||||||||||| |||||||| | ||||||    
T  18252148 ctcctccaatggacaagagaccaccctcctgaatcccatttagtgaaat 18252100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 21849231 - 21849312
Alignment:
Q  5 aatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagt 86  Q
    |||||| ||||||||||||| |||||||||||  |||||||||||||||   |||||||||| ||||||||| |||||||||    
T  21849231 aatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaagaaaaccctcgtgcatcagt 21849312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 21857145 - 21857226
Alignment:
Q  5 aatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagt 86  Q
    |||||| ||||||||||||| |||||||||||  |||||||||||||||   |||||||||| ||||||||| |||||||||    
T  21857145 aatagaaagttctagaaaattactaagatttggttaaataataaatactataaaattactaagaaaaccctcgtgcatcagt 21857226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40779043 - 40779108
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaa 66  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||   ||||||||||    
T  40779043 taataatagaaagttctagaaaattactaagatttggctaaataataaatactgtaaaattactaa 40779108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 123
Target Start/End: Original strand, 19677630 - 19677674
Alignment:
Q  80 catcagtctcctccacctctaaagaactcga-cccgagttctcat 123  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  19677630 catcagtctcctccacctctgaagaactcgaccccgagttctcat 19677674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 3063995 - 3064190
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    ||||||||  |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||     
T  3063995 taataataacgagttctagagaattactaagatttggctaaataataaatactactaaattactaacaaaaccctcctgcatcagtctcctccacctctg 3064094  T
Q  101 aagaactcga-cccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaa 197  Q
    |||||||||| ||||||||||| ||||| | ||||| |   ||| ||| ||||| |||||||||| || ||||||  |||||| ||||||||||||||    
T  3064095 aagaactcgaccccgagttctcgttctagtgaagagctatccattcat-tgttgactcctccaat-aaaaagagaataccctcatggatcccattgaa 3064190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 203
Target Start/End: Original strand, 365846 - 366007
Alignment:
Q  40 aaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgacc-cgagttctcattctaataaagagatt 138  Q
    |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| ||||||||| || | |||||||| ||    
T  365846 aaataataaatactactaaattactaataaaatcctcctgcatcaatctcctccacctctgaagaactcgacctcgagttctcgttttgataaagagctt 365945  T
Q  139 ctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatgaaat 203  Q
    | ||||  ||||||| ||| ||||||||||| ||||||||||||| |||||||||||| ||||||    
T  365946 c-catg--tatgttgactcttccaatgaacaggagaccaccctccgggatcccattgagtgaaat 366007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 196
Target Start/End: Original strand, 8536655 - 8536781
Alignment:
Q  69 aaaccctcctgcatcagtctcctccacctctaaagaactcgac-ccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatgaa 167  Q
    |||||||||| |||||| ||| ||||||||||||||||||||| ||||||||| ||||| ||||| || |||||||  |||||||| ||| |||||||||    
T  8536655 aaaccctcctacatcagcctcttccacctctaaagaactcgactccgagttcttattctgataaaaagtttctcat--atatgttgactcttccaatgaa 8536752  T
Q  168 caagagaccaccctcctggatcccattga 196  Q
    ||||||| |||||||||||||||||||||    
T  8536753 caagagatcaccctcctggatcccattga 8536781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 43304217 - 43304306
Alignment:
Q  4 taatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctcc 93  Q
    ||||||| |||| |||||||| ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  43304217 taatagaaagttatagaaaattactaagatttggctaaataataaatgctactaaattactaataaaaccctcctgcatcagtctcctcc 43304306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 53012852 - 53012778
Alignment:
Q  10 agagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  53012852 agagttctagaaaattactaagatttggctaaataataaatactactaaattactaataaaaccctcctgcatca 53012778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43306928 - 43307011
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatca 84  Q
    ||||||||||  |||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  43306928 taataatagaatgttctagaaaattactaagatttggttaaataataaatactactaaattactaataaaaccctcctgcatca 43307011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3069131 - 3069206
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctc 76  Q
    ||||||||| |||||||||| ||| || |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  3069131 taataatagtgagttctagagaattacaaagatttggctaaataataaatactactaaattactaataaaaccctc 3069206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 2472952 - 2473084
Alignment:
Q  40 aaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagaga-- 136  Q
    |||||||||||||| ||||||||||||||||||| |  || |||||  |||||||| | |||||||||||| |||||||||||||||| ||||| | |      
T  2472952 aaataataaatactactaaattactaataaaacctttgtgtatcagcttcctccacttttaaagaactcgaccccgagttctcattctgataaaaaaaac 2473051  T
Q  137 ttctcatgcatatgttggctcctccaatgaacaag 171  Q
    |||||||||  |||||| || ||||||||||||||    
T  2473052 ttctcatgc--atgttgacttctccaatgaacaag 2473084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 19319093 - 19319018
Alignment:
Q  202 ataatgtggaattggtgagcatgtgatcacaaaaatgtttaagagcttcaaggttgaaatatgagtcccttgctgc 277  Q
    |||||||||||| |  ||||||||||||||  |||| |||||||||||||||| |||||||||  |||||||||||    
T  19319093 ataatgtggaatggaagagcatgtgatcactgaaatatttaagagcttcaaggctgaaatatgcatcccttgctgc 19319018  T

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Target: scaffold0054 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 10490 - 10349
Alignment:
Q  43 taataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaataaagagattctc 141  Q
    |||||||||||  ||||||||||| ||||||||||| |||||||||| ||||||||||| ||| | || ||| |||||||||| | |||||||| ||| |    
T  10490 taataaatactaataaattactaagaaaaccctcctacatcagtctcatccacctctaaggaaatagaccccaagttctcattatgataaagagcttccc 10391  T
Q  142 atgcatatgttggctcctccaatgaacaagagaccaccctcctg 185  Q
    ||| |||  ||| ||||||||||||||||||||| |||||||||    
T  10390 atgaata--ttgactcctccaatgaacaagagacaaccctcctg 10349  T

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Target: scaffold0054; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 49127 - 48993
Alignment:
Q  69 aaaccctcctgcatcagtctcctccacctctaaagaactcga-cccgagttctcattctaat-aaagagattctcatgcatatgttggctcctccaatga 166  Q
    |||| ||||| |||||||||||||||||||| |||||||| | |||||||||| ||||| || |||||  ||| |||||  |||||| ||| ||| ||||    
T  49127 aaactctcctacatcagtctcctccacctctgaagaactcaaccccgagttcttattctgataaaagaacttc-catgc--atgttgactcttcctatga 49031  T
Q  167 acaagagaccaccctcctggatcccattgaatgaaata 204  Q
    ||| |||| ||||| || |||||||||||| |||||||    
T  49030 acacgagaacacccacccggatcccattgagtgaaata 48993  T

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Target: scaffold0054; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 37523 - 37465
Alignment:
Q  74 ctcctgcatcagtctcctccacctctaaagaactcgacccgagttctcattctaataaa 132  Q
    ||||| |||||||||||||||||||| ||||||||||||| | |||| ||||| |||||    
T  37523 ctcctacatcagtctcctccacctctgaagaactcgacccaaattcttattctgataaa 37465  T

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Target: scaffold0110 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 45873 - 45995
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaataataaatacttctaaattactaataaaaccctcctgcatcagtctcctccacctcta 100  Q
    |||||||||| ||||||||||||||||||| ||||| |||||  | |||||||   ||||||||||  || ||||||| ||||||||||||||||||||     
T  45873 taataatagaaagttctagaaaatcactaaaatttggctaaaata-aaatactataaaattactaaggaagccctcctacatcagtctcctccacctctg 45971  T
Q  101 aagaactcga-cccgagttctcat 123  Q
    |||||||||| |||||||||||||    
T  45972 aagaactcgaccccgagttctcat 45995  T

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Target: scaffold0110; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46961 - 47002
Alignment:
Q  1 taataatagagagttctagaaaatcactaagatttgactaaa 42  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  46961 taataatagaaagttctagaaaatcactaaaatttgactaaa 47002  T

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Target: scaffold0024 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 144177 - 144312
Alignment:
Q  70 aaccctcctgcatcagtctcctccacc---tctaaagaactcgacccgagttctcattctaataaagagattctcatgcatatgttggctcctccaatga 166  Q
    |||||||||||||||||||||||| ||   ||| ||||||| |||||||||||| ||||| |||||||| |   ||| ||| ||| | ||||| | ||||    
T  144177 aaccctcctgcatcagtctcctcctccatctctgaagaacttgacccgagttcttattctgataaagagttgtccattcat-tgtcgactccttcgatga 144275  T
Q  167 acaagagaccaccctcctggatcccattgaatgaaat 203  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  144276 acaagagacgacccttctggatcccattgaatgaaat 144312  T

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Target: scaffold0024; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 145555 - 145481
Alignment:
Q  61 tactaataaaaccctcctgcatcagtctcctccacctctaaagaactcgacccgagttctcattctaataaagag 135  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||| | ||||| ||||||||    
T  145555 tactaataaaaccctcctacatcagtctcctccacctcagaagaacttgacccgagttattattctgataaagag 145481  T

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Target: scaffold0240 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 15762 - 15685
Alignment:
Q  124 tctaataaagagattctcatgcatatgttggctcctccaatgaacaagagaccaccctcctggatcccattgaatgaaat 203  Q
    |||||||||||  |||||||||||  |||| ||||||||||||||| |||||||||||||  | ||||||||||||||||    
T  15762 tctaataaagaacttctcatgcat--gttgactcctccaatgaacaggagaccaccctccaaggtcccattgaatgaaat 15685  T

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Target: scaffold0242 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 9080 - 9005
Alignment:
Q  202 ataatgtggaattggtgagcatgtgatcacaaaaatgtttaagagcttcaaggttgaaatatgagtcccttgctgc 277  Q
    |||||||||||| |  |||||||||||||| ||||| ||||||||||| |||| |||||||||  |||||||||||    
T  9080 ataatgtggaatggaagagcatgtgatcactaaaatatttaagagcttgaaggctgaaatatgcatcccttgctgc 9005  T

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Target: scaffold0242; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 11384 - 11309
Alignment:
Q  202 ataatgtggaattggtgagcatgtgatcacaaaaatgtttaagagcttcaaggttgaaatatgagtcccttgctgc 277  Q
    |||||||||||| |  |||||||||||||| ||||| ||||||||||| |||| |||||||||  |||||||||||    
T  11384 ataatgtggaatggaagagcatgtgatcactaaaatatttaagagctttaaggctgaaatatgcatcccttgctgc 11309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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