View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9893_high_60 (Length: 217)
Name: NF9893_high_60
Description: NF9893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9893_high_60 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 32384389 - 32384589
Alignment:
| Q |
1 |
aaccaaaaatgaaagaacttcagaatgttaacagatgaaataagacctggaataatctctcacgtgaaaatataggaagatgaaagtatatattgaatca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32384389 |
aaccaaaaatgaaagaacttcagaatgttaacagatgaaataagacctggaataatctctcacgtgaaaatataggaagatgaaagtatatattgaatca |
32384488 |
T |
|
| Q |
101 |
taactaacagaaaacttacagaattagctcctctagcttttgcttcttcagatgtctccaattgctccactcgcccaaccttatatcttcacaatggaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32384489 |
taactaacagaaaacttacagaattagctcctctagcttttgcttcttcagatgtctccaattgctccactcgcccaaccttatatcttcacaatggaaa |
32384588 |
T |
|
| Q |
201 |
a |
201 |
Q |
| |
|
| |
|
|
| T |
32384589 |
a |
32384589 |
T |
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