View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9893_low_37 (Length: 310)

Name: NF9893_low_37
Description: NF9893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9893_low_37
NF9893_low_37
[»] chr5 (69 HSPs)
chr5 (20-300)||(41091188-41091467)
chr5 (175-300)||(3966506-3966631)
chr5 (178-300)||(39698547-39698669)
chr5 (178-300)||(19579707-19579829)
chr5 (20-114)||(41101475-41101569)
chr5 (175-300)||(11685942-11686066)
chr5 (166-300)||(32766874-32767008)
chr5 (175-300)||(30098329-30098454)
chr5 (190-257)||(6401516-6401583)
chr5 (178-234)||(6471886-6471942)
chr5 (185-300)||(14873530-14873639)
chr5 (175-231)||(30502388-30502444)
chr5 (175-231)||(30542731-30542787)
chr5 (190-257)||(21814279-21814346)
chr5 (175-234)||(36838546-36838605)
chr5 (175-257)||(18592076-18592158)
chr5 (178-286)||(7677711-7677819)
chr5 (175-231)||(28588674-28588730)
chr5 (175-297)||(15410382-15410504)
chr5 (198-264)||(21542056-21542122)
chr5 (178-231)||(16203795-16203848)
chr5 (190-251)||(19453046-19453107)
chr5 (178-279)||(21522756-21522857)
chr5 (178-279)||(21533322-21533423)
chr5 (185-222)||(24273039-24273076)
chr5 (185-222)||(24389138-24389175)
chr5 (185-246)||(32444779-32444840)
chr5 (179-236)||(35017044-35017101)
chr5 (192-249)||(37328826-37328883)
chr5 (175-219)||(17593734-17593778)
chr5 (179-235)||(22423808-22423864)
chr5 (175-222)||(12264838-12264885)
chr5 (180-302)||(23015924-23016040)
chr5 (172-231)||(26312769-26312828)
chr5 (175-222)||(27144466-27144513)
chr5 (185-231)||(18421841-18421887)
chr5 (161-227)||(39758261-39758327)
chr5 (179-257)||(40131628-40131706)
chr5 (173-218)||(5467991-5468036)
chr5 (178-231)||(21191056-21191109)
chr5 (175-216)||(27932238-27932279)
chr5 (178-235)||(39205886-39205943)
chr5 (175-235)||(2436925-2436985)
chr5 (175-235)||(6035486-6035545)
chr5 (179-231)||(6247629-6247681)
chr5 (180-248)||(13287383-13287450)
chr5 (175-231)||(34879353-34879409)
chr5 (253-300)||(2436981-2437028)
chr5 (180-231)||(17925172-17925223)
chr5 (178-229)||(23012410-23012461)
chr5 (178-300)||(43001806-43001922)
chr5 (179-257)||(3751904-3751982)
chr5 (177-219)||(12927659-12927701)
chr5 (185-215)||(19438356-19438386)
chr5 (178-216)||(21576760-21576798)
chr5 (175-229)||(23220986-23221040)
chr5 (185-235)||(41558650-41558700)
chr5 (185-218)||(21194136-21194169)
chr5 (185-214)||(21194222-21194251)
chr5 (178-235)||(31084329-31084386)
chr5 (190-231)||(42029770-42029811)
chr5 (175-231)||(2548390-2548446)
chr5 (175-231)||(2577180-2577236)
chr5 (192-236)||(16374337-16374381)
chr5 (190-230)||(32426870-32426910)
chr5 (227-287)||(32428842-32428902)
chr5 (175-231)||(32630735-32630791)
chr5 (175-235)||(38749559-38749619)
chr5 (178-230)||(42893366-42893418)
[»] chr2 (64 HSPs)
chr2 (187-300)||(35056883-35056996)
chr2 (126-300)||(44860273-44860448)
chr2 (185-300)||(37419756-37419871)
chr2 (187-300)||(32749756-32749869)
chr2 (175-222)||(21616765-21616812)
chr2 (190-257)||(36096349-36096416)
chr2 (178-256)||(18420409-18420487)
chr2 (193-283)||(28524447-28524537)
chr2 (178-256)||(30717505-30717583)
chr2 (173-231)||(34691805-34691863)
chr2 (173-231)||(34714217-34714275)
chr2 (175-257)||(22084804-22084888)
chr2 (175-228)||(23718029-23718082)
chr2 (175-228)||(24105701-24105754)
chr2 (175-300)||(24975257-24975381)
chr2 (190-251)||(34784962-34785023)
chr2 (179-300)||(36756275-36756396)
chr2 (180-279)||(2331802-2331899)
chr2 (179-231)||(5367199-5367251)
chr2 (186-234)||(15909629-15909677)
chr2 (175-231)||(37411244-37411300)
chr2 (175-230)||(18276524-18276579)
chr2 (176-247)||(18889575-18889646)
chr2 (173-279)||(36281686-36281793)
chr2 (186-300)||(11223795-11223908)
chr2 (175-221)||(28677912-28677958)
chr2 (179-300)||(15657871-15657992)
chr2 (190-231)||(20242727-20242768)
chr2 (178-234)||(21782817-21782871)
chr2 (185-230)||(38355888-38355933)
chr2 (179-235)||(12668419-12668475)
chr2 (178-287)||(27084268-27084373)
chr2 (175-235)||(29970545-29970605)
chr2 (177-264)||(27286259-27286346)
chr2 (180-235)||(30527591-30527646)
chr2 (175-222)||(31808080-31808127)
chr2 (175-230)||(42832277-42832332)
chr2 (172-218)||(23921253-23921299)
chr2 (180-222)||(35449521-35449563)
chr2 (175-229)||(39279678-39279732)
chr2 (179-272)||(4207864-4207956)
chr2 (172-249)||(4882678-4882755)
chr2 (179-236)||(18622613-18622670)
chr2 (167-299)||(17776582-17776714)
chr2 (175-231)||(31018593-31018649)
chr2 (179-235)||(33153431-33153487)
chr2 (179-222)||(2665897-2665940)
chr2 (179-218)||(25846748-25846787)
chr2 (185-247)||(2423882-2423944)
chr2 (175-217)||(28412353-28412395)
chr2 (178-231)||(2438719-2438772)
chr2 (173-250)||(6045897-6045974)
chr2 (190-231)||(20922928-20922969)
chr2 (179-300)||(26769518-26769639)
chr2 (186-227)||(30471052-30471093)
chr2 (240-273)||(32355475-32355508)
chr2 (175-216)||(39323267-39323308)
chr2 (180-229)||(44605141-44605190)
chr2 (185-221)||(17520080-17520116)
chr2 (190-250)||(18054784-18054844)
chr2 (175-231)||(18570975-18571031)
chr2 (180-216)||(30404865-30404901)
chr2 (178-229)||(31284054-31284106)
chr2 (179-231)||(38442314-38442366)
[»] chr4 (76 HSPs)
chr4 (175-300)||(30982809-30982934)
chr4 (172-297)||(30838210-30838335)
chr4 (192-300)||(22234821-22234929)
chr4 (192-302)||(19312355-19312465)
chr4 (175-263)||(903925-904013)
chr4 (190-257)||(5414146-5414213)
chr4 (175-233)||(13783284-13783342)
chr4 (175-225)||(22440606-22440656)
chr4 (179-300)||(24613632-24613753)
chr4 (175-231)||(8423718-8423774)
chr4 (224-300)||(15724485-15724561)
chr4 (166-300)||(18513177-18513306)
chr4 (193-257)||(46083965-46084029)
chr4 (178-300)||(3947703-3947819)
chr4 (180-235)||(5775354-5775409)
chr4 (179-222)||(36635331-36635374)
chr4 (175-222)||(40613453-40613500)
chr4 (192-298)||(27706110-27706216)
chr4 (238-300)||(34306746-34306808)
chr4 (178-235)||(15659756-15659813)
chr4 (175-228)||(16189712-16189765)
chr4 (179-300)||(19482675-19482796)
chr4 (178-246)||(11596337-11596405)
chr4 (175-219)||(30522927-30522971)
chr4 (179-231)||(54580023-54580075)
chr4 (172-235)||(18576033-18576096)
chr4 (192-251)||(19500838-19500897)
chr4 (192-262)||(32915574-32915645)
chr4 (190-257)||(44132618-44132685)
chr4 (188-235)||(46160912-46160959)
chr4 (185-235)||(13134463-13134513)
chr4 (180-300)||(24343515-24343630)
chr4 (176-230)||(33950140-33950194)
chr4 (175-232)||(35723383-35723441)
chr4 (185-230)||(9996853-9996898)
chr4 (178-231)||(15029771-15029824)
chr4 (186-231)||(40179636-40179681)
chr4 (176-264)||(847955-848043)
chr4 (188-236)||(7970535-7970583)
chr4 (187-231)||(10499270-10499314)
chr4 (175-215)||(38148741-38148781)
chr4 (180-248)||(40742599-40742667)
chr4 (178-237)||(56257939-56257996)
chr4 (175-218)||(1747215-1747258)
chr4 (175-222)||(3712518-3712565)
chr4 (179-230)||(7214523-7214574)
chr4 (186-221)||(8402752-8402787)
chr4 (194-300)||(28000672-28000779)
chr4 (178-229)||(29205450-29205501)
chr4 (185-246)||(4099974-4100038)
chr4 (238-300)||(12895216-12895278)
chr4 (175-217)||(16184820-16184862)
chr4 (179-217)||(17425403-17425441)
chr4 (238-300)||(23292928-23292990)
chr4 (178-216)||(28964263-28964301)
chr4 (177-222)||(999357-999402)
chr4 (185-218)||(3064926-3064959)
chr4 (178-231)||(4672085-4672138)
chr4 (178-235)||(12895112-12895169)
chr4 (179-248)||(21658797-21658866)
chr4 (178-231)||(21945509-21945562)
chr4 (178-231)||(23292986-23293039)
chr4 (178-227)||(26504303-26504352)
chr4 (185-230)||(30103358-30103402)
chr4 (180-217)||(32910559-32910596)
chr4 (178-235)||(35952613-35952670)
chr4 (167-300)||(44081509-44081641)
chr4 (185-222)||(46180945-46180982)
chr4 (185-217)||(2234263-2234295)
chr4 (185-249)||(5225595-5225659)
chr4 (175-247)||(7012069-7012141)
chr4 (179-231)||(12797338-12797389)
chr4 (192-300)||(31602937-31603045)
chr4 (175-207)||(34200295-34200327)
chr4 (190-218)||(35161054-35161082)
chr4 (179-219)||(37698719-37698759)
[»] chr8 (60 HSPs)
chr8 (180-300)||(11944673-11944793)
chr8 (180-300)||(11927017-11927137)
chr8 (178-300)||(22651982-22652104)
chr8 (179-300)||(29447041-29447162)
chr8 (161-300)||(21465401-21465540)
chr8 (190-300)||(26902106-26902216)
chr8 (175-233)||(39954277-39954335)
chr8 (179-300)||(15816060-15816181)
chr8 (178-279)||(25172650-25172751)
chr8 (195-300)||(29447467-29447572)
chr8 (175-258)||(24362174-24362258)
chr8 (175-231)||(34897088-34897144)
chr8 (179-258)||(2572029-2572108)
chr8 (179-300)||(27067233-27067350)
chr8 (178-300)||(29510235-29510357)
chr8 (178-231)||(13844596-13844649)
chr8 (161-222)||(14731701-14731762)
chr8 (175-251)||(4611537-4611613)
chr8 (180-231)||(4786338-4786389)
chr8 (179-230)||(14134706-14134757)
chr8 (178-228)||(31236580-31236630)
chr8 (178-231)||(3025557-3025610)
chr8 (180-300)||(11803267-11803387)
chr8 (178-282)||(12570458-12570561)
chr8 (178-230)||(12606830-12606882)
chr8 (178-297)||(22197676-22197795)
chr8 (178-234)||(25566847-25566903)
chr8 (161-229)||(40332180-40332248)
chr8 (179-230)||(20679396-20679447)
chr8 (193-248)||(28384977-28385032)
chr8 (180-231)||(33405384-33405435)
chr8 (179-229)||(7658470-7658520)
chr8 (193-231)||(8847277-8847315)
chr8 (175-245)||(14634127-14634197)
chr8 (179-300)||(16641911-16642026)
chr8 (175-249)||(36934673-36934747)
chr8 (175-217)||(37283824-37283866)
chr8 (178-254)||(29776042-29776116)
chr8 (200-256)||(4122224-4122280)
chr8 (179-231)||(4948659-4948711)
chr8 (179-219)||(13203648-13203688)
chr8 (175-211)||(18067954-18067990)
chr8 (178-222)||(27213553-27213597)
chr8 (180-300)||(28819199-28819319)
chr8 (166-230)||(33382020-33382084)
chr8 (191-235)||(34451033-34451077)
chr8 (175-282)||(12570684-12570790)
chr8 (180-231)||(12985400-12985451)
chr8 (190-229)||(18964195-18964234)
chr8 (175-222)||(20785474-20785521)
chr8 (178-232)||(8342978-8343032)
chr8 (178-300)||(8343322-8343444)
chr8 (238-300)||(24858071-24858133)
chr8 (178-236)||(30271286-30271344)
chr8 (177-227)||(34222952-34223002)
chr8 (180-221)||(34201056-34201097)
chr8 (179-231)||(926788-926840)
chr8 (175-247)||(7442848-7442920)
chr8 (175-231)||(24669436-24669492)
chr8 (191-231)||(43737811-43737851)
[»] chr3 (80 HSPs)
chr3 (178-300)||(34185054-34185176)
chr3 (156-231)||(7928434-7928509)
chr3 (180-300)||(15796225-15796345)
chr3 (175-246)||(8039820-8039891)
chr3 (178-300)||(4987222-4987344)
chr3 (180-231)||(25093510-25093561)
chr3 (175-231)||(8383260-8383316)
chr3 (177-257)||(11665949-11666029)
chr3 (175-251)||(16192730-16192806)
chr3 (192-300)||(16789032-16789139)
chr3 (175-231)||(49505154-49505210)
chr3 (172-235)||(25948883-25948946)
chr3 (172-231)||(38731218-38731277)
chr3 (185-231)||(8789550-8789596)
chr3 (172-278)||(14832099-14832205)
chr3 (170-219)||(10690274-10690323)
chr3 (178-235)||(11313796-11313853)
chr3 (179-256)||(14209120-14209197)
chr3 (179-300)||(41961581-41961702)
chr3 (175-251)||(1550143-1550219)
chr3 (176-251)||(15812803-15812876)
chr3 (178-217)||(11251984-11252023)
chr3 (175-257)||(25064912-25064992)
chr3 (178-233)||(28918007-28918062)
chr3 (179-226)||(29112285-29112332)
chr3 (167-222)||(29508439-29508494)
chr3 (175-222)||(32804549-32804596)
chr3 (175-218)||(34307793-34307836)
chr3 (192-231)||(40993335-40993374)
chr3 (178-220)||(9624647-9624689)
chr3 (179-221)||(12704014-12704056)
chr3 (180-230)||(20691327-20691377)
chr3 (238-300)||(55401130-55401192)
chr3 (179-300)||(9800047-9800168)
chr3 (179-220)||(11493372-11493413)
chr3 (178-298)||(14829696-14829816)
chr3 (185-234)||(15314873-15314922)
chr3 (179-300)||(17005550-17005671)
chr3 (190-231)||(35222956-35222997)
chr3 (178-231)||(45451559-45451612)
chr3 (178-235)||(49651782-49651839)
chr3 (185-221)||(1438817-1438853)
chr3 (128-231)||(7614415-7614519)
chr3 (179-287)||(28812522-28812630)
chr3 (179-251)||(34910324-34910396)
chr3 (161-232)||(1509528-1509599)
chr3 (175-234)||(4990964-4991023)
chr3 (175-218)||(5407260-5407303)
chr3 (178-217)||(27277852-27277891)
chr3 (172-231)||(48353731-48353790)
chr3 (173-219)||(4469851-4469897)
chr3 (185-231)||(6780419-6780465)
chr3 (191-221)||(11507485-11507515)
chr3 (180-222)||(11658823-11658865)
chr3 (190-232)||(14028025-14028067)
chr3 (180-218)||(14840304-14840342)
chr3 (185-235)||(25211552-25211602)
chr3 (178-216)||(26508116-26508154)
chr3 (224-286)||(46190929-46190991)
chr3 (190-231)||(2941576-2941617)
chr3 (190-231)||(13414487-13414528)
chr3 (185-230)||(13807182-13807227)
chr3 (190-231)||(13845525-13845566)
chr3 (195-256)||(14216915-14216976)
chr3 (195-256)||(14223044-14223105)
chr3 (178-215)||(14979187-14979224)
chr3 (177-218)||(32429393-32429434)
chr3 (185-234)||(39002045-39002094)
chr3 (178-231)||(51206353-51206406)
chr3 (190-222)||(2731830-2731862)
chr3 (175-219)||(4201399-4201443)
chr3 (175-231)||(4466600-4466656)
chr3 (178-234)||(10455796-10455852)
chr3 (179-231)||(10954959-10955011)
chr3 (179-231)||(18426956-18427008)
chr3 (247-283)||(21559362-21559398)
chr3 (180-232)||(26290379-26290431)
chr3 (178-234)||(28678309-28678365)
chr3 (178-218)||(30994895-30994935)
chr3 (186-222)||(48202278-48202314)
[»] chr7 (81 HSPs)
chr7 (175-300)||(32308123-32308248)
chr7 (178-300)||(24339648-24339770)
chr7 (179-287)||(6630856-6630964)
chr7 (175-300)||(1433457-1433576)
chr7 (185-235)||(22602706-22602756)
chr7 (172-300)||(5409773-5409895)
chr7 (166-235)||(16341490-16341559)
chr7 (180-300)||(9408265-9408385)
chr7 (175-231)||(20549794-20549850)
chr7 (172-235)||(7328687-7328750)
chr7 (172-222)||(17851431-17851481)
chr7 (180-258)||(26329355-26329433)
chr7 (179-300)||(11665371-11665492)
chr7 (192-300)||(2334270-2334377)
chr7 (175-235)||(5548679-5548739)
chr7 (180-251)||(15902830-15902901)
chr7 (175-230)||(19206053-19206108)
chr7 (139-222)||(42720899-42720985)
chr7 (185-231)||(9482947-9482993)
chr7 (185-235)||(17307906-17307956)
chr7 (178-232)||(19992007-19992061)
chr7 (192-282)||(21560523-21560613)
chr7 (178-300)||(26033392-26033514)
chr7 (175-217)||(29787383-29787425)
chr7 (178-231)||(3721099-3721152)
chr7 (179-236)||(27945048-27945105)
chr7 (177-217)||(2424619-2424659)
chr7 (186-230)||(5835261-5835305)
chr7 (175-231)||(26733307-26733363)
chr7 (175-231)||(32287463-32287519)
chr7 (180-299)||(1415578-1415697)
chr7 (179-222)||(22868049-22868092)
chr7 (178-300)||(43027406-43027522)
chr7 (175-234)||(49107824-49107882)
chr7 (172-218)||(1401025-1401071)
chr7 (166-248)||(8160410-8160492)
chr7 (175-217)||(14729704-14729746)
chr7 (177-231)||(21880157-21880211)
chr7 (175-221)||(23191899-23191945)
chr7 (175-229)||(27093415-27093469)
chr7 (175-229)||(27184832-27184886)
chr7 (192-278)||(27229264-27229350)
chr7 (180-234)||(35297669-35297723)
chr7 (185-251)||(48246793-48246859)
chr7 (193-230)||(640134-640171)
chr7 (175-228)||(3520345-3520398)
chr7 (190-231)||(18213033-18213074)
chr7 (190-231)||(39138462-39138503)
chr7 (167-235)||(5233624-5233692)
chr7 (185-300)||(9778513-9778622)
chr7 (179-235)||(18013070-18013126)
chr7 (185-241)||(19930931-19930987)
chr7 (178-230)||(24146822-24146874)
chr7 (175-231)||(28155573-28155629)
chr7 (175-215)||(30731040-30731080)
chr7 (178-217)||(12289120-12289159)
chr7 (192-235)||(18039019-18039062)
chr7 (175-230)||(22484028-22484083)
chr7 (175-234)||(25791656-25791714)
chr7 (180-227)||(27732243-27732290)
chr7 (185-248)||(11272569-11272634)
chr7 (180-222)||(12278843-12278885)
chr7 (180-234)||(23128658-23128712)
chr7 (178-216)||(25481908-25481946)
chr7 (178-216)||(30813818-30813856)
chr7 (175-228)||(2425736-2425789)
chr7 (175-228)||(2948686-2948739)
chr7 (179-232)||(3991331-3991384)
chr7 (198-279)||(4794915-4794996)
chr7 (180-293)||(6028633-6028746)
chr7 (166-235)||(11890915-11890984)
chr7 (178-235)||(18215182-18215239)
chr7 (185-218)||(18233611-18233644)
chr7 (180-229)||(23849460-23849509)
chr7 (175-235)||(5235989-5236049)
chr7 (180-300)||(7438714-7438834)
chr7 (179-235)||(7758329-7758385)
chr7 (202-238)||(9949064-9949100)
chr7 (179-235)||(21140978-21141034)
chr7 (179-231)||(37870900-37870952)
chr7 (175-227)||(38134410-38134462)
[»] chr1 (90 HSPs)
chr1 (179-300)||(9828051-9828172)
chr1 (180-279)||(6612123-6612222)
chr1 (176-251)||(44482234-44482309)
chr1 (185-254)||(25361899-25361968)
chr1 (192-300)||(5944303-5944411)
chr1 (175-287)||(17831477-17831587)
chr1 (166-260)||(34371708-34371801)
chr1 (175-264)||(9629867-9629956)
chr1 (178-300)||(1486646-1486762)
chr1 (179-237)||(7918205-7918263)
chr1 (175-248)||(5376483-5376556)
chr1 (175-236)||(6427353-6427414)
chr1 (175-235)||(20157346-20157406)
chr1 (192-300)||(31694641-31694749)
chr1 (192-300)||(47989517-47989625)
chr1 (175-230)||(36878464-36878519)
chr1 (175-250)||(36906000-36906075)
chr1 (180-229)||(1864882-1864931)
chr1 (175-300)||(17754314-17754439)
chr1 (173-250)||(21038084-21038161)
chr1 (167-264)||(27471533-27471630)
chr1 (178-231)||(40181877-40181930)
chr1 (177-257)||(6414976-6415055)
chr1 (175-231)||(9709823-9709879)
chr1 (175-235)||(38503323-38503383)
chr1 (178-225)||(12443466-12443513)
chr1 (175-222)||(25098564-25098611)
chr1 (190-257)||(25934634-25934701)
chr1 (175-280)||(12993197-12993302)
chr1 (185-222)||(19324575-19324612)
chr1 (185-234)||(25272495-25272544)
chr1 (190-231)||(30749858-30749899)
chr1 (190-231)||(30771309-30771350)
chr1 (178-235)||(34712379-34712436)
chr1 (192-300)||(6427484-6427592)
chr1 (179-231)||(14332642-14332694)
chr1 (179-235)||(24577182-24577238)
chr1 (179-251)||(28273068-28273140)
chr1 (175-231)||(39953146-39953202)
chr1 (175-235)||(40285650-40285710)
chr1 (175-218)||(398778-398821)
chr1 (175-230)||(2896122-2896177)
chr1 (175-230)||(5898267-5898322)
chr1 (187-222)||(10233268-10233303)
chr1 (179-234)||(10572586-10572641)
chr1 (238-301)||(16297222-16297285)
chr1 (167-222)||(17425102-17425157)
chr1 (179-218)||(34298443-34298482)
chr1 (178-300)||(40917757-40917877)
chr1 (172-231)||(52903249-52903308)
chr1 (179-237)||(1704986-1705044)
chr1 (175-229)||(13997886-13997940)
chr1 (178-216)||(31015049-31015087)
chr1 (238-300)||(38078603-38078665)
chr1 (178-235)||(113305-113362)
chr1 (178-231)||(13436464-13436517)
chr1 (185-230)||(23636050-23636095)
chr1 (178-231)||(38075970-38076023)
chr1 (178-222)||(19562630-19562674)
chr1 (175-231)||(41877470-41877526)
chr1 (180-279)||(16164267-16164366)
chr1 (191-222)||(17705595-17705626)
chr1 (178-217)||(25452162-25452201)
chr1 (175-214)||(26238129-26238168)
chr1 (161-231)||(29229450-29229521)
chr1 (192-235)||(35919272-35919315)
chr1 (179-221)||(12713337-12713379)
chr1 (179-221)||(12717428-12717470)
chr1 (185-231)||(18337342-18337388)
chr1 (180-230)||(40258934-40258984)
chr1 (192-234)||(48148034-48148076)
chr1 (238-300)||(51410080-51410142)
chr1 (185-230)||(2784569-2784614)
chr1 (231-300)||(5927282-5927351)
chr1 (178-219)||(16927197-16927238)
chr1 (175-212)||(19909300-19909337)
chr1 (178-231)||(22515887-22515940)
chr1 (185-230)||(43492495-43492540)
chr1 (180-229)||(43942332-43942381)
chr1 (248-300)||(9630563-9630615)
chr1 (175-211)||(10474997-10475033)
chr1 (179-231)||(22881616-22881668)
chr1 (178-222)||(23738684-23738728)
chr1 (175-219)||(28674803-28674847)
chr1 (191-231)||(29163381-29163421)
chr1 (172-216)||(37055871-37055915)
chr1 (179-231)||(37598839-37598890)
chr1 (179-231)||(42359449-42359501)
chr1 (175-235)||(44296491-44296550)
chr1 (178-222)||(49872843-49872887)
[»] scaffold0008 (1 HSPs)
scaffold0008 (178-302)||(263301-263425)
[»] scaffold0044 (1 HSPs)
scaffold0044 (172-264)||(53180-53272)
[»] chr6 (85 HSPs)
chr6 (172-300)||(10294107-10294235)
chr6 (175-300)||(9629386-9629511)
chr6 (178-300)||(16766703-16766825)
chr6 (178-235)||(9025490-9025547)
chr6 (175-231)||(7265593-7265649)
chr6 (179-259)||(9195726-9195806)
chr6 (185-300)||(10339056-10339172)
chr6 (178-300)||(9107301-9107423)
chr6 (179-300)||(8365450-8365571)
chr6 (179-300)||(31384927-31385047)
chr6 (175-235)||(9027181-9027241)
chr6 (175-231)||(19040355-19040411)
chr6 (190-257)||(16488564-16488631)
chr6 (185-248)||(26562702-26562765)
chr6 (178-236)||(7086801-7086859)
chr6 (174-248)||(9617436-9617510)
chr6 (177-235)||(34073343-34073401)
chr6 (179-300)||(7248365-7248486)
chr6 (175-231)||(7377982-7378038)
chr6 (179-279)||(9522898-9522998)
chr6 (175-247)||(21395292-21395363)
chr6 (175-222)||(30866153-30866200)
chr6 (175-229)||(9658882-9658936)
chr6 (175-300)||(5000557-5000682)
chr6 (178-231)||(7996378-7996431)
chr6 (178-231)||(8022370-8022423)
chr6 (179-236)||(10770669-10770726)
chr6 (185-222)||(11591879-11591916)
chr6 (185-230)||(13360373-13360418)
chr6 (190-251)||(18367854-18367915)
chr6 (179-236)||(19044471-19044528)
chr6 (178-231)||(21924935-21924988)
chr6 (175-231)||(5732510-5732566)
chr6 (175-235)||(6665216-6665276)
chr6 (178-300)||(17841531-17841642)
chr6 (175-231)||(20371110-20371166)
chr6 (175-231)||(32511666-32511722)
chr6 (175-222)||(1532243-1532290)
chr6 (180-251)||(5970088-5970159)
chr6 (192-231)||(7027262-7027301)
chr6 (192-263)||(11424679-11424750)
chr6 (175-222)||(13851739-13851786)
chr6 (186-300)||(17327592-17327700)
chr6 (161-219)||(5462675-5462733)
chr6 (238-300)||(6898223-6898285)
chr6 (179-233)||(7151419-7151473)
chr6 (238-300)||(7977772-7977834)
chr6 (185-235)||(8931598-8931648)
chr6 (175-217)||(31579239-31579281)
chr6 (178-235)||(7723246-7723303)
chr6 (178-231)||(33001289-33001342)
chr6 (179-247)||(34290063-34290129)
chr6 (224-300)||(3209440-3209516)
chr6 (193-237)||(9911522-9911566)
chr6 (175-235)||(10888970-10889030)
chr6 (185-229)||(13364707-13364751)
chr6 (175-235)||(32320665-32320725)
chr6 (179-231)||(34595141-34595193)
chr6 (192-251)||(8714000-8714059)
chr6 (178-217)||(8805586-8805625)
chr6 (175-222)||(10842535-10842582)
chr6 (175-218)||(17341677-17341720)
chr6 (178-241)||(20576623-20576686)
chr6 (180-262)||(32839612-32839697)
chr6 (180-218)||(7569181-7569219)
chr6 (185-235)||(9024172-9024222)
chr6 (180-230)||(11784217-11784267)
chr6 (175-273)||(25038029-25038127)
chr6 (179-229)||(26178683-26178733)
chr6 (238-300)||(28152153-28152215)
chr6 (238-300)||(32298549-32298611)
chr6 (178-235)||(12696330-12696387)
chr6 (186-235)||(13815456-13815505)
chr6 (185-234)||(14796187-14796236)
chr6 (185-218)||(16388246-16388279)
chr6 (177-222)||(24832593-24832638)
chr6 (178-231)||(28152105-28152157)
chr6 (178-231)||(28715301-28715354)
chr6 (180-229)||(32299283-32299332)
chr6 (175-287)||(33817952-33818072)
chr6 (178-234)||(3398625-3398680)
chr6 (179-231)||(7801156-7801208)
chr6 (178-230)||(7938122-7938174)
chr6 (179-231)||(12627577-12627629)
chr6 (175-235)||(19147845-19147905)
[»] scaffold0123 (1 HSPs)
scaffold0123 (175-263)||(44493-44581)
[»] scaffold0003 (1 HSPs)
scaffold0003 (178-300)||(241600-241722)
[»] scaffold0020 (2 HSPs)
scaffold0020 (178-235)||(135308-135365)
scaffold0020 (185-248)||(137793-137856)
[»] scaffold0036 (1 HSPs)
scaffold0036 (179-251)||(9727-9799)
[»] scaffold0136 (1 HSPs)
scaffold0136 (192-300)||(3780-3888)
[»] scaffold0171 (2 HSPs)
scaffold0171 (192-258)||(23531-23597)
scaffold0171 (192-235)||(23440-23483)
[»] scaffold0053 (1 HSPs)
scaffold0053 (238-300)||(8853-8915)
[»] scaffold0022 (2 HSPs)
scaffold0022 (175-241)||(99896-99962)
scaffold0022 (180-219)||(90851-90890)
[»] scaffold0623 (1 HSPs)
scaffold0623 (190-257)||(5970-6037)
[»] scaffold1528 (1 HSPs)
scaffold1528 (175-265)||(1038-1128)
[»] scaffold0376 (1 HSPs)
scaffold0376 (166-232)||(6306-6372)
[»] scaffold0236 (1 HSPs)
scaffold0236 (180-234)||(25765-25819)
[»] scaffold0039 (1 HSPs)
scaffold0039 (185-279)||(84925-85019)
[»] scaffold0223 (1 HSPs)
scaffold0223 (178-235)||(20178-20235)
[»] scaffold0110 (1 HSPs)
scaffold0110 (175-236)||(28853-28914)
[»] scaffold0004 (1 HSPs)
scaffold0004 (175-216)||(92810-92851)
[»] scaffold0168 (1 HSPs)
scaffold0168 (180-248)||(21051-21119)
[»] scaffold0086 (1 HSPs)
scaffold0086 (192-296)||(2948-3052)
[»] scaffold0019 (1 HSPs)
scaffold0019 (192-300)||(71745-71853)
[»] scaffold0279 (1 HSPs)
scaffold0279 (208-263)||(17848-17903)
[»] scaffold0050 (2 HSPs)
scaffold0050 (180-231)||(70286-70337)
scaffold0050 (238-299)||(70333-70394)
[»] scaffold0049 (1 HSPs)
scaffold0049 (175-230)||(63776-63831)
[»] scaffold0361 (2 HSPs)
scaffold0361 (238-300)||(14582-14644)
scaffold0361 (179-216)||(14537-14574)
[»] scaffold0122 (1 HSPs)
scaffold0122 (191-241)||(8685-8735)
[»] scaffold0103 (1 HSPs)
scaffold0103 (178-216)||(51817-51855)
[»] scaffold0025 (1 HSPs)
scaffold0025 (192-234)||(23790-23832)
[»] scaffold0652 (1 HSPs)
scaffold0652 (178-231)||(462-515)
[»] scaffold0450 (1 HSPs)
scaffold0450 (179-300)||(8566-8687)
[»] scaffold0306 (1 HSPs)
scaffold0306 (179-216)||(13407-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (179-216)||(21883-21920)
[»] scaffold0027 (1 HSPs)
scaffold0027 (180-216)||(46690-46726)


Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 20 - 300
Target Start/End: Complemental strand, 41091467 - 41091188
Alignment:
Q  20 actgtttcatagttagtttaattgaggttctccttgttacatgagatatacttcaatacgaagaaaactctattttaactttatttcatggctctatctc 119  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41091467 actgttttatagttagtttaattgaggttctccttgttacatgagatatacttcaatacgaagaaaactctattttaactttatttcatggctctatctc 41091368  T
Q  120 tctacctatgaaacacaggtacggatacaaacatcagacatgacatgacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  41091367 tctacctatgaaacacagttac-gatacaaacaccagacatgacatgacacggacactgctaatgatttgagaaaatcacataattcagtgtaattatat 41091269  T
Q  220 gtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    ||| || ||||||||||||||||||| ||||||||||| ||||||||  |||| |||||||||||||| ||||||||||||    
T  41091268 gtgtcgatgtcgtgtcaatgtcggacgcgacatgtgtctaacaccaaggcacgtctaatctgaggagtgttcgtgcttcat 41091188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 175 - 300
Target Start/End: Original strand, 3966506 - 3966631
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||     ||||| |    
T  3966506 accgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgtccaacagagggacacgtc 3966605  T
Q  275 taatctgaggagttttcgtgcttcat 300  Q
    ||||| ||||||| | ||||||||||    
T  3966606 taatccgaggagtgtccgtgcttcat 3966631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 39698547 - 39698669
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| | ||||||||||  ||||||||||||||||| ||| ||||| | ||||||||||    
T  39698547 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaa 39698646  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| | ||||||||||    
T  39698647 tccgaggagtgtccgtgcttcat 39698669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 19579707 - 19579829
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| ||||||||||||||||||||| |||| ||||| | ||| ||||||||||||| ||||||||||||||| |||| ||||||   ||||||||||    
T  19579707 gctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaa 19579806  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| | |||| |||||    
T  19579807 tccgaggagtgtacgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 41101569 - 41101475
Alignment:
Q  20 actgtttcatagttagtttaattgaggttctccttgttacatgagatatacttcaatacgaagaaaactctattttaactttatttcatggctct 114  Q
    ||||||| |||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||||  |||||||||||    
T  41101569 actgttttatagttggtttaatttaggttcaccttgttgcatgagatatacttcaatacgaagaaaactcgatttcaacttttattcatggctct 41101475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 300
Target Start/End: Original strand, 11685942 - 11686066
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    ||||||||| |||||||||| || ||||||| |||||||||||||||| ||||||||| ||  |||||||||||||| |||||||| |||||  |||| |    
T  11685942 accgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgtccaaaaccaaggcacggc 11686040  T
Q  275 taatctgaggagttttcgtgcttcat 300  Q
    ||||| ||||||| | ||||||||||    
T  11686041 taatcggaggagtgtccgtgcttcat 11686066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 300
Target Start/End: Complemental strand, 32767008 - 32766874
Alignment:
Q  166 gacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacacca 265  Q
    ||||| || ||||||||| ||||||||||||| || |||||| ||||||||||||||   ||||||||||  ||||| | |||||| |||||| ||||||    
T  32767008 gacaccgacaccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacacca 32766909  T
Q  266 aaacacgcctaatctgaggagttttcgtgcttcat 300  Q
      | ||| |||||||||||||| | ||||||||||    
T  32766908 ggatacgtctaatctgaggagtgtccgtgcttcat 32766874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 300
Target Start/End: Original strand, 30098329 - 30098454
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||  || |||| ||| |||| |||||||||||||| |||||  ||||||  |||| ||    
T  30098329 accgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacc 30098428  T
Q  275 taatctgaggagttttcgtgcttcat 300  Q
    ||||| ||||| | | ||||||||||    
T  30098429 taatccgaggaatgtccgtgcttcat 30098454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 6401516 - 6401583
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||| |||||||||||||| |||||    
T  6401516 agaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtc 6401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 6471942 - 6471886
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  6471942 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 300
Target Start/End: Original strand, 14873530 - 14873639
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgagg 284  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||      ||||||||| | ||| ||||||||||||   |||||||||||| ||||    
T  14873530 atttgagaaaagcacataatttagtgtaattatatgtgtcggtgtc------atgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgagg 14873623  T
Q  285 agttttcgtgcttcat 300  Q
    ||| | ||||||||||    
T  14873624 agtgtccgtgcttcat 14873639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 30502444 - 30502388
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||    
T  30502444 accgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 30542787 - 30542731
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||    
T  30542787 accgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 21814279 - 21814346
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||  |||||||||||||| |||||    
T  21814279 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtc 21814346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 36838546 - 36838605
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||||||    
T  36838546 accgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 18592076 - 18592158
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    |||||||||  ||| ||||||| |||||||||| |||||||||||||| ||||||||||||  |||||||||| ||| |||||    
T  18592076 accgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtc 18592158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 286
Target Start/End: Original strand, 7677711 - 7677819
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||||||||||||||||| ||||| | ||| ||||||||||||  |||| |||||| ||  ||||| |||||   ||||||||||    
T  7677711 gctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaa 7677810  T
Q  278 tctgaggag 286  Q
    || ||||||    
T  7677811 tccgaggag 7677819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 28588730 - 28588674
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  28588730 accggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcg 28588674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 297
Target Start/End: Complemental strand, 15410504 - 15410382
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    ||||||||| |||| ||||||| | || |||||||||||| |||||||  ||||| ||||| ||||  || |||||| ||||||||||||   ||||| |    
T  15410504 accgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttggtgttgtgtcgatgttcgatacgacaagtgtccaacaccgggacacgtc 15410405  T
Q  275 taatctgaggagttttcgtgctt 297  Q
    ||| | ||||||| |||||||||    
T  15410404 taagccgaggagtgttcgtgctt 15410382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 21542056 - 21542122
Alignment:
Q  198 acataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacacc 264  Q
    ||||||||||||||||||| | ||| ||||||||||||  |||||||||||||| |||||| |||||    
T  21542056 acataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacc 21542122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 16203848 - 16203795
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  16203848 gctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcg 16203795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 19453107 - 19453046
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    ||||||||||| |||  |  ||||||||||||| ||||||||||||||||||||||||||||    
T  19453107 agaaaatcacaaaatataccgtaattatatgtgtcggtgtcgtgtcaatgtcggacacgaca 19453046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 21522756 - 21522857
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||| | ||||| ||||||||||||||||||| |  || ||||||||||||  |||||||||||||| ||||||  ||||   ||||||||||    
T  21522756 gctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaa 21522855  T
Q  278 tc 279  Q
    ||    
T  21522856 tc 21522857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 21533322 - 21533423
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||| | ||||| ||||||||||||||||||| |  || ||||||||||||  |||||||||||||| ||||||  ||||   ||||||||||    
T  21533322 gctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaa 21533421  T
Q  278 tc 279  Q
    ||    
T  21533422 tc 21533423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 24273076 - 24273039
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24273076 atttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 24389138 - 24389175
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24389138 atttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 32444779 - 32444840
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggaca 246  Q
    ||||||||| || |||||||||| |||||| | ||||| |||||||||||||||||||||||    
T  32444779 atttgagaagatgacataattcaatgtaatcaaatgtgtcggtgtcgtgtcaatgtcggaca 32444840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 35017044 - 35017101
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||  |||||||||||    
T  35017044 ctaataatttgagaaaatcacataatttagtgtaattatatgggatagtgtcgtgtca 35017101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 37328883 - 37328826
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacga 249  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||  ||||||||||||    
T  37328883 aaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacga 37328826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 17593778 - 17593734
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||    
T  17593778 accgctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 22423864 - 22423808
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||| ||||||||||||||||||||||| | ||||||||| || ||||||||||||    
T  22423864 ctaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtc 22423808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 12264885 - 12264838
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  12264885 accgctaattatttgagaaaattacatgattcagtgtaattatatgtg 12264838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 23016040 - 23015924
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||||||||||||||||||||||||||||||||| ||| || ||| |      | ||||||||||||||||||| |||     ||||||||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattataggtgtcgatgttg------tatcggacacgacatgtgtccgacattgggacacgcctaatc 23015947  T
Q  280 tgaggagttttcgtgcttcatct 302  Q
     ||||||| | || |||||||||    
T  23015946 cgaggagtgtccgagcttcatct 23015924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 26312769 - 26312828
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||| ||| ||||||||||||||  |||||||||||||||||||||  ||||||||    
T  26312769 gataccgcaaataatttgagaaaatcaattaattcagtgtaattatatgtatcggtgtcg 26312828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 27144466 - 27144513
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  27144466 accgctaataatttgaggaaatcacataatttagtgtaattatatgtg 27144513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 18421887 - 18421841
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  18421887 atttgagaaaatcacataatccagtgtaattatatgtgtcggcgtcg 18421841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 39758261 - 39758327
Alignment:
Q  161 gacatgacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggt 227  Q
    |||| |||||||| || |||||   ||| ||||||||||||||||||||||||||||||||| ||||    
T  39758261 gacacgacacggacacagctaaattttttagaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 40131628 - 40131706
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||| |||||| |||||||||||||||||| ||||||||  |  ||||||||| || ||||| |||||||| ||||||    
T  40131628 ctaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcgtatcgatgtcagacacgacttgtgtc 40131706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 5468036 - 5467991
Alignment:
Q  173 ataccgctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||    
T  5468036 ataccgataataatttgataaaatcacataattcagtgtaattata 5467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 21191109 - 21191056
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| ||||||||    
T  21191109 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 21191056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 27932238 - 27932279
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  27932238 accgctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 39205886 - 39205943
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||||||||||| ||||||  |||||||||||||||  |||||||||||    
T  39205886 gctaataatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtc 39205943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 2436925 - 2436985
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| |||||  |||||||||||||||  ||| |||||||||| ||||||||||||    
T  2436925 accgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtcgtgtc 2436985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 6035486 - 6035545
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| |||||||||| | | |||||||||||||||||||| || ||||||||||||    
T  6035486 accgctaataatttgagaaa-taatataattcagtgtaattatatttgtcggtgtcgtgtc 6035545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 6247629 - 6247681
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||| ||||||||    
T  6247629 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 6247681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 13287450 - 13287383
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    |||| |||||| |||||||||||||||||||||| || | ||| ||||||||||||  |||||||||||    
T  13287450 taataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtc-ctgtcggacacg 13287383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 34879353 - 34879409
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||  |||||||||||||| ||||||||||||||| ||||||| || |||||    
T  34879353 accgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcg 34879409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 2436981 - 2437028
Alignment:
Q  253 gtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||||| ||||||| |||||||||||| ||||||| ||||||||||||    
T  2436981 gtgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcat 2437028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 17925223 - 17925172
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||| |||||||||||||||||| |||||| ||||||| ||||||||    
T  17925223 taataatttaagaaaatcacataattcaatgtaataatatgtgtcggtgtcg 17925172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 23012461 - 23012410
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||||| |||||||||||||| |||||| | |||||||||||||| ||||||    
T  23012461 gctaataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgt 23012410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 43001806 - 43001922
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||| ||||||||||||||||||| | |||  ||||  |||||      |||||||||| ||||| ||||||   ||||||||||    
T  43001806 gctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgtc------ggacacgacacgtgtcaaacacctggacacgcctaa 43001899  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| | ||||||||||    
T  43001900 tccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 257
Target Start/End: Complemental strand, 3751982 - 3751904
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||| ||||||||||||||||||| | ||| ||||||||||||   || |||||||| ||| | |||||||| |||||    
T  3751982 ctaataatttgagaaaatcacataactaagtataattatatgtgttagtatcgtgtcagtgttgaacacgacacgtgtc 3751904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 12927659 - 12927701
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    ||||||| |||||||||||||| |||||| |||||||||||||    
T  12927659 cgctaataatttgagaaaatcatataatttagtgtaattatat 12927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 215
Target Start/End: Original strand, 19438356 - 19438386
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaatt 215  Q
    |||||||||||||||||||||||||||||||    
T  19438356 atttgagaaaatcacataattcagtgtaatt 19438386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 21576798 - 21576760
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  21576798 gctaataatttgaaaaaatcacataattcagtgtaatta 21576760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 23220986 - 23221040
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    ||||||||| |||||| |||||||||||||| ||||| || ||||||| ||||||    
T  23220986 accgctaataatttgataaaatcacataatttagtgttatcatatgtgtcggtgt 23221040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 41558700 - 41558650
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||||||||| |||||||||| |||||||| ||||| | ||||||||||    
T  41558700 atttgagaaaatgacataattcaatgtaattaaatgtgtcagtgtcgtgtc 41558650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 21194169 - 21194136
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattata 218  Q
    ||||||||||||||||| ||||||||||||||||    
T  21194169 atttgagaaaatcacatcattcagtgtaattata 21194136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 214
Target Start/End: Complemental strand, 21194251 - 21194222
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaat 214  Q
    ||||||||||||||||||||||||||||||    
T  21194251 atttgagaaaatcacataattcagtgtaat 21194222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 31084329 - 31084386
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||| |||||||||||||||| |||||||| | ||| || |||||||||    
T  31084329 gctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtc 31084386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 42029770 - 42029811
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||||||||||| |||||||||||||  ||||||||    
T  42029770 agaaaatcacataattcaatgtaattatatgtatcggtgtcg 42029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 2548390 - 2548446
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||| ||| |||||||| ||||||||||||||||| ||| ||| ||||||||    
T  2548390 accgataataattagagaaaattacataattcagtgtaatcataagtgtcggtgtcg 2548446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 2577236 - 2577180
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||| |||||||||||| |||||||| |||||||| ||||||  ||||||||    
T  2577236 accgataataatttgagaaaatgacataatttagtgtaatcatatgttccggtgtcg 2577180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 16374381 - 16374337
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    ||||| |||||| |||||||||||| ||||| |||||||||||||    
T  16374381 aaaataacataaatcagtgtaattacatgtgtcggtgtcgtgtca 16374337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 32426910 - 32426870
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||||||||||||||||| ||||||||| |||| |||||||    
T  32426910 agaaaatcacataattcattgtaattatttgtgtcggtgtc 32426870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 32428902 - 32428842
Alignment:
Q  227 tgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagt 287  Q
    |||||||||  |||| ||||||||||||||| |||||  | ||||| ||||||||||||||    
T  32428902 tgtcgtgtcggtgtctgacacgacatgtgtcgaacacgtagacacggctaatctgaggagt 32428842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 32630791 - 32630735
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||| |||||||||||| | |||||||| |||||||||||||| | ||||||    
T  32630791 accgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcg 32630735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 38749619 - 38749559
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||| |||| |||||| ||||| |||||||||| ||||||||||||||  ||||| |||||    
T  38749619 accgataataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtc 38749559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 42893366 - 42893418
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||||| |||||| ||||||||||||| ||||||||||| | ||| |||||||    
T  42893366 gctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 187 - 300
Target Start/End: Original strand, 35056883 - 35056996
Alignment:
Q  187 ttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggag 286  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||  |||||||||||||| |||||| ||||  |||||||||||||||||||||    
T  35056883 ttgagaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggag 35056982  T
Q  287 ttttcgtgcttcat 300  Q
    | | ||||||||||    
T  35056983 tgtccgtgcttcat 35056996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 300
Target Start/End: Original strand, 44860273 - 44860448
Alignment:
Q  126 tatgaaacacaggtacggatacaaacatcagacatgacatg-acacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgac 224  Q
    |||||| ||| | |||||||||  ||| |||||| |||| | |||| || ||||||||| ||||||||||||| |||||||||||||||||||||||| |    
T  44860273 tatgaagcacggatacggatacgtacaccagacacgacacggacactgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtc 44860372  T
Q  225 ggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    ||||||||||   ||| ||||||||||||||||| ||| |   |||| ||||||  ||||||| | ||||||||||    
T  44860373 ggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcat 44860448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 300
Target Start/End: Original strand, 37419756 - 37419871
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgagg 284  Q
    |||||| ||||||||| ||||||||||||||| | ||| ||||||||||||  ||||||||||||   |||||| |||||   |||||||||||| ||||    
T  37419756 atttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgagg 37419855  T
Q  285 agttttcgtgcttcat 300  Q
    ||| | ||||||||||    
T  37419856 agtgtccgtgcttcat 37419871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 32749869 - 32749756
Alignment:
Q  187 ttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggag 286  Q
    |||||||||||||||||||||||||||| ||| ||| | |||||||||| |||||||||  ||||||||||| ||||    |||||||| |||| |||||    
T  32749869 ttgagaaaatcacataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggag 32749770  T
Q  287 ttttcgtgcttcat 300  Q
    | | || |||||||    
T  32749769 tgtccgcgcttcat 32749756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 21616765 - 21616812
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21616765 accgctaataatttgagaaaatcacataattcagtgtaattatatgtg 21616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 36096416 - 36096349
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||||||||| ||| |||||||||||||| || |||||||||||| ||||||||||||||| |||||    
T  36096416 agaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtc 36096349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 18420487 - 18420409
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgt 256  Q
    |||||| ||||||||||||||||||||||| || ||||||| ||| |||||| ||||| |||||||||| |||| ||||    
T  18420487 gctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatgacaagtgt 18420409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 283
Target Start/End: Original strand, 28524447 - 28524537
Alignment:
Q  193 aaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgag 283  Q
    |||||||||||||||||||||||||||||| || ||| ||||   |||||||||| ||| |||||  ||||  ||||||||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgtctgacacagaaacacgcctaatctgag 28524537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 30717583 - 30717505
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgt 256  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| || |||||||||  |||||||||||||| ||||    
T  30717583 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgt 30717505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 34691863 - 34691805
Alignment:
Q  173 ataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  34691863 ataccgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 34714275 - 34714217
Alignment:
Q  173 ataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  34714275 ataccgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 22084888 - 22084804
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaa--ttatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    |||| |||| |||||||||||||| ||||||||||||||  ||||||||| |||| |||||||| |||||||||| ||| |||||    
T  22084888 accgttaataatttgagaaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaacacgtgtc 22084804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 23718029 - 23718082
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtg 228  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  23718029 accgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 24105701 - 24105754
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtg 228  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  24105701 accgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 300
Target Start/End: Complemental strand, 24975381 - 24975257
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    ||||||||| |||||||||||||  |||||||||||||| |||||| | ||||||||||||  |||| ||||| |||||||||| ||||    |||   |    
T  24975381 accgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtccgtgtcagacac-acatgtgtccgacactgggacaaatc 24975283  T
Q  275 taatctgaggagttttcgtgcttcat 300  Q
    ||||||||||||| | ||||||||||    
T  24975282 taatctgaggagtgtccgtgcttcat 24975257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 34785023 - 34784962
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||  | ||||||||||||    
T  34785023 agaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgaca 34784962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 36756396 - 36756275
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| ||||||  |||| ||||||||||||||||||||| ||| ||||||||||| | ||||| |||| |||  ||||| |||||  ||||||||||||    
T  36756396 ctaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaacacatgtccgacaccgcaacacgcctaat 36756297  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    |  |||||| |  |||||||||    
T  36756296 cctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 2331802 - 2331899
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| ||||||||||||||||||||||||||||  | |||||| ||||||||||||| |||||| |||  || |||||  ||||||  ||||||||||||    
T  2331802 taataatttgagaaaatcacataattcagtgta--tttatgtgtcggtgtcgtgtcagtgtcgggcacagcacgtgtctgacaccaggacacgcctaatc 2331899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 5367199 - 5367251
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcg 5367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 15909677 - 15909629
Alignment:
Q  186 tttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  15909677 tttgagaaaattacataattcagtgtaattatatgtgacagtgtcgtgt 15909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 37411300 - 37411244
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| || |||||    
T  37411300 accgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcg 37411244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 18276524 - 18276579
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||    
T  18276524 accgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtc 18276579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 18889646 - 18889575
Alignment:
Q  176 ccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacac 247  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||| ||||||| |||   ||||||||||    
T  18889646 ccgctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacac 18889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 36281686 - 36281793
Alignment:
Q  173 ataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacac-gacatgtgtccaacaccaaaacac 271  Q
    |||||| |||| ||||||||||||||||||||| |||||||| ||||||  || ||| |||||  |||||||||| ||| ||||| | || || ||||||    
T  36281686 ataccgttaataatttgagaaaatcacataatttagtgtaatcatatgtttcgatgtggtgtccgtgtcggacacggacgtgtgttcgacgccgaaacac 36281785  T
Q  272 gcctaatc 279  Q
    ||||||||    
T  36281786 gcctaatc 36281793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 300
Target Start/End: Complemental strand, 11223908 - 11223795
Alignment:
Q  186 tttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgagga 285  Q
    ||||| ||||| ||||||||||||||||||| | ||| ||||||| |||   ||||||||||||||  ||||  |||||   ||||||||||||||||||    
T  11223908 tttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgaca-ctgtctgacaccgggacacgcctaatctgagga 11223810  T
Q  286 gttttcgtgcttcat 300  Q
    || | ||||||||||    
T  11223809 gtgtccgtgcttcat 11223795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 28677912 - 28677958
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgt 221  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  28677912 accgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 15657871 - 15657992
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||  ||||||||||||||||||||||||| |  || |||||||||||  ||||||||| ||||| |||||| || ||   ||||||||| |    
T  15657871 ctaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgcctagt 15657970  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||||||| | | ||||||||    
T  15657971 ccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 20242768 - 20242727
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 20242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 21782871 - 21782817
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||||| ||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  21782871 gctaataatttgagaaaatcacataattcagtgtaat--tatgtgccggtgtcgtgt 21782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 38355933 - 38355888
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 38355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 12668475 - 12668419
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||| |||||| ||||| ||||||||||||||||||||| ||| ||||||||||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtc 12668419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 287
Target Start/End: Original strand, 27084268 - 27084373
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||||||||||| |||||||| ||||    || ||| || | || ||||  |||||||||||||| |||||||||||| | ||||||||||    
T  27084268 gctaataatttgagaaaatcatataattcaatgta----taagtgtcgatttcatgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaa 27084363  T
Q  278 tctgaggagt 287  Q
    || |||||||    
T  27084364 tcggaggagt 27084373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 29970605 - 29970545
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| ||||||||||||| |||| ||||||||||| ||||||| || |||||||||    
T  29970605 accgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcgatgtcgtgtc 29970545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 27286346 - 27286259
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacacc 264  Q
    ||||||| |||||| || ||||||||||| |||||||||||| ||| |  |||| |||| |||||||||||||||  ||||| |||||    
T  27286346 cgctaataatttgataagatcacataattaagtgtaattataggtgtcaatgtcatgtcgatgtcggacacgacacatgtccgacacc 27286259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 30527646 - 30527591
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||| |||||||||||||| |||||| |||||||||||||||| |||| |||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtgtcggtatcgtgtc 30527591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 31808080 - 31808127
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||||    
T  31808080 accgctaataatttaacaaaatcacataattcagtgtaattatatgtg 31808127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 42832332 - 42832277
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  42832332 accgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 23921253 - 23921299
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||||    
T  23921253 gataccgttaataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 35449521 - 35449563
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtg 35449563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 39279678 - 39279732
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||| |||| || ||||||||||| ||||||||||||||||||||||| ||||||    
T  39279678 accgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 4207864 - 4207956
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacg 272  Q
    ||||| |||||| |||| | ||||||| ||||||||||||| || |||| |||||||  |||||||||||||| |||| | ||||| |||||||    
T  4207864 ctaataatttgaaaaaagcgcataatttagtgtaattatat-tgtcggtatcgtgtcggtgtcggacacgacacgtgttcgacaccgaaacacg 4207956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 4882755 - 4882678
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacga 249  Q
    |||||||||||| |||||| ||||| | ||||||||||||||||| | ||| || |||||||||  |||| |||||||    
T  4882755 gataccgctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacga 4882678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 18622613 - 18622670
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    ||||| |||| | ||||||||||||||||||||||||||| |||  ||||||||||||    
T  18622613 ctaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtca 18622670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 299
Target Start/End: Original strand, 17776582 - 17776714
Alignment:
Q  167 acacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaa 266  Q
    |||| ||||||  |||| |||| |||||| ||||||| |||||||||||||||||| | |||||  |||  ||| ||||||||| ||||||| ||  |      
T  17776582 acaccgataccaataataatttaagaaaaccacataagtcagtgtaattatatgtgtcagtgtcaagtcggtgttggacacgacgtgtgtccgacctcgg 17776681  T
Q  267 aacacgcctaatctgaggagttttcgtgcttca 299  Q
     ||| |||||||| ||||||| | |||||||||    
T  17776682 gacaggcctaatccgaggagtgtccgtgcttca 17776714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 31018593 - 31018649
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||| |||||||||||| ||| |||||||||||| ||| ||||||||    
T  31018593 accgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcg 31018649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 33153431 - 33153487
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||||||| | ||||||||||||||||||||||||| | ||| | ||||||||||    
T  33153431 ctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcgtgtc 33153487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 2665940 - 2665897
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||    
T  2665940 ctaataattttagaaaatcacataatttagtgtaattatatgtg 2665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 25846748 - 25846787
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  25846748 ctaataatttgagaaaatcacatgattcagtgtaattata 25846787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 2423882 - 2423944
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacac 247  Q
    |||||||||||||| |||||| ||| |||||||||| | | ||||||| || |||||||||||    
T  2423882 atttgagaaaatcatataatttagtataattatatgagtcagtgtcgtatcgatgtcggacac 2423944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 28412353 - 28412395
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    |||| |||| |||||| ||||||||||||||||||||||||||    
T  28412353 accgttaataatttgataaaatcacataattcagtgtaattat 28412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 2438772 - 2438719
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||| | ||||||||||||||||||||||||| | ||| ||||||||    
T  2438772 gctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 2438719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 6045974 - 6045897
Alignment:
Q  173 ataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgac 250  Q
    ||||||||||| |||||| ||||||| | ||||||  ||| ||||||||| |||||| ||||   |||||||||||||    
T  6045974 ataccgctaataatttgataaaatcatacaattcaaagtagttatatgtgtcggtgtggtgttggtgtcggacacgac 6045897  T

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Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 20922969 - 20922928
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||||||||| |||||||||||||||| | ||||||    
T  20922969 agaaaatcacataatttagtgtaattatatgtgtctgtgtcg 20922928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 26769518 - 26769639
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||| || ||||||| ||   ||||||||| | ||| ||||||| ||||  | |||||||||||| |||||| ||||    |||||||||||    
T  26769518 ctaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaat 26769617  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||||||| | ||||||||||    
T  26769618 ccgaggagtgtccgtgcttcat 26769639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 30471052 - 30471093
Alignment:
Q  186 tttgagaaaatcacataattcagtgtaattatatgtgacggt 227  Q
    |||||||||||||||||||||  |||||||||||||| ||||    
T  30471052 tttgagaaaatcacataattcgatgtaattatatgtgtcggt 30471093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 32355475 - 32355508
Alignment:
Q  240 tcggacacgacatgtgtccaacaccaaaacacgc 273  Q
    ||||||||||||||||||| ||||||||||||||    
T  32355475 tcggacacgacatgtgtccgacaccaaaacacgc 32355508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 39323267 - 39323308
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    ||||||||| |||||| ||||| |||||||||||||||||||    
T  39323267 accgctaataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 44605190 - 44605141
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||| |||||||||||| |||||||||| |||||||| ||||| ||||||    
T  44605190 taataatttgagaaaataacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 17520116 - 17520080
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgt 221  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  17520116 atttaagaaaatcacataattcagtgtaatcatatgt 17520080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 18054844 - 18054784
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgac 250  Q
    ||||||||||| | | |||||||||||||||||  |||||||||||  ||||| |||||||    
T  18054844 agaaaatcacaaactgcagtgtaattatatgtgttggtgtcgtgtcggtgtcgaacacgac 18054784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 18570975 - 18571031
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||| |||||||||||| |||||||||| |||||| ||||||| | ||||||    
T  18570975 accgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcg 18571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 30404901 - 30404865
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaatta 216  Q
    |||| |||||| |||||||||||||||||||||||||    
T  30404901 taataatttgaaaaaatcacataattcagtgtaatta 30404865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 31284054 - 31284106
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaatta-tatgtgacggtgt 229  Q
    |||||| |||||||||||||||||||| || |||||||| |||||| ||||||    
T  31284054 gctaataatttgagaaaatcacataatccattgtaattattatgtgtcggtgt 31284106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 38442314 - 38442366
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||| | |||||||||||||||| | |||||||| ||| ||||||||    
T  38442314 ctaatgatttaaaaaaatcacataattcaatataattataagtgtcggtgtcg 38442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 9e-27; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 175 - 300
Target Start/End: Complemental strand, 30982934 - 30982809
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||  |||| ||||||||| |||||| |||||   |||||||    
T  30982934 accgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcc 30982835  T
Q  275 taatctgaggagttttcgtgcttcat 300  Q
    |||||  | |||| | ||||||||||    
T  30982834 taatccaaagagtgtccgtgcttcat 30982809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 30838210 - 30838335
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacac 271  Q
    ||||| |||||| |||||| ||||| | |||||| |||||||||||| ||  ||||||||||||| |||||||| ||||| |||||| ||||||| ||||    
T  30838210 gatactgctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacac 30838309  T
Q  272 gcctaatctgaggagttttcgtgctt 297  Q
    |||||| | ||||||| | |||||||    
T  30838310 gcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 22234929 - 22234821
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    |||||||||||||||||||||||| |||||| ||||||||||||  |||| ||||||||| |||||| ||||||  ||||  |||||| ||| ||| |||    
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttc 22234830  T
Q  292 gtgcttcat 300  Q
    |||||||||    
T  22234829 gtgcttcat 22234821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 19312355 - 19312465
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    |||||||||| |||||||||||||||| ||  ||||||||||||  ||||||| |||||| |||||| ||||| | ||||| |||||||||| ||| | |    
T  19312355 aaaatcacatgattcagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtcc 19312454  T
Q  292 gtgcttcatct 302  Q
    ||| |||||||    
T  19312455 gtgtttcatct 19312465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 903925 - 904013
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacac 263  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||  | || |||| ||  ||| ||||||||||||||||| ||||    
T  903925 accgttaataatttgagaaaatcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgacatgtgtccgacac 904013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 5414213 - 5414146
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||||||||| ||| ||||||||||||||||  ||||||||||||| |||||||||||||| |||||    
T  5414213 agaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtc 5414146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 13783284 - 13783342
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtg 233  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  13783284 accgctaattatttgagaagatcacaaaattcagtgtaattatatgtgccggtgtcgtg 13783342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 22440656 - 22440606
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacg 225  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  22440656 accgttaataatttgagaaaatcacataattcagtgtaattatatgtgacg 22440606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 24613753 - 24613632
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| ||||||||||||||||||||||| ||||| || | ||| ||||||| ||||  |||| ||||||||| |||||  ||||||  ||||| |||||    
T  24613753 ctaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaat 24613654  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    |  |||||| | ||||||||||    
T  24613653 cctaggagtgtccgtgcttcat 24613632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8423774 - 8423718
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  || ||||||||    
T  8423774 accgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcg 8423718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 15724561 - 15724485
Alignment:
Q  224 cggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    ||||||||||||  |||||||||| ||| |||||  |||||||||||||||||||| |||||||||  |||||||||    
T  15724561 cggtgtcgtgtcggtgtcggacacaacacgtgtcagacaccaaaacacgcctaatccgaggagtttatgtgcttcat 15724485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 300
Target Start/End: Complemental strand, 18513306 - 18513177
Alignment:
Q  166 gacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacac-gacatgtgtccaacacc 264  Q
    ||||| || |||| |||| |||||||||||| |||||||||| |||||| ||||||| | |||| |||||      |||||| ||| ||||||| |||||    
T  18513306 gacacagacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttgtgtc------ggacaccgacgtgtgtccgacacc 18513213  T
Q  265 aaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |  |||||||||||||||||||| | ||||||||||    
T  18513212 aggacacgcctaatctgaggagtgtccgtgcttcat 18513177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 46084029 - 46083965
Alignment:
Q  193 aaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||||||||||  |||||||||||||||| ||||||||||||| | |||||||||||| |||||    
T  46084029 aaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgtc 46083965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 3947819 - 3947703
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| |||||| |||||||||||||||||| | ||| | ||||||||||      |||||||||| |||||| ||||||  |||| |||||    
T  3947819 gctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtc------ggacacgacacgtgtccgacaccaggacacacctaa 3947726  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| | ||||||||||    
T  3947725 tccgaggagtgtccgtgcttcat 3947703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 5775409 - 5775354
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||| ||||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtcatgtc 5775354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 36635331 - 36635374
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  36635331 ctaataatttgagaaaatcacataattcagtgtaattatatgtg 36635374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 40613453 - 40613500
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||    
T  40613453 accgctaatattttgagaaaatcacataattcagtgtaattatatgtg 40613500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 298
Target Start/End: Complemental strand, 27706216 - 27706110
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    |||||||||||||| |||||||||| | |||   ||||||||| |||||||||||||||| || ||| | |||   |||||||||||||||||| | | |    
T  27706216 aaaatcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacgacacgtatccgataccgggacacgcctaatctgaggaatgtac 27706117  T
Q  292 gtgcttc 298  Q
    |||||||    
T  27706116 gtgcttc 27706110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 34306808 - 34306746
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||||||||||||| |||||| ||||| | |||||||||||||||||| | ||||||||||||    
T  34306808 tgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcat 34306746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 15659813 - 15659756
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||  |||||||||||    
T  15659813 gctaataatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcgtgtc 15659756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 16189712 - 16189765
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtg 228  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||| |||||    
T  16189712 accgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 19482675 - 19482796
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||| || |||||||||||| ||||||||| | |||  |||||||||||  | | |||||||||| |||||| ||||    |||| ||||||    
T  19482675 ctaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacctaat 19482774  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||||||| ||||||||||||    
T  19482775 ccgaggagtgttcgtgcttcat 19482796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 11596405 - 11596337
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggaca 246  Q
    |||||| |||||| ||||||||||||||||||||||||| | |||  |||||||||||| |||| ||||    
T  11596405 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcattgtccgaca 11596337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 30522971 - 30522927
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||    
T  30522971 accgctaattatttgagaaaatcacataattcagtgtaactatat 30522927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 54580075 - 54580023
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 54580023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 18576096 - 18576033
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||| ||| || |||||||||||||||||||||| |||||||||||||||  |||||| ||||    
T  18576096 gatactgctgataatttgagaaaatcacataattcggtgtaattatatgtgttggtgtcatgtc 18576033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 19500897 - 19500838
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    |||| |||||| || ||||||||||||||||| |||||||||||  ||||||||||||||    
T  19500897 aaaaacacatattttagtgtaattatatgtgatggtgtcgtgtcggtgtcggacacgaca 19500838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 32915645 - 32915574
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacgg-tgtcgtgtcaatgtcggacacgacatgtgtccaaca 262  Q
    |||||||||||||||| |||||||||||||  ||| ||||||||| ||||| ||||| |||| |||||||||    
T  32915645 aaaatcacataattcaatgtaattatatgtttcggttgtcgtgtcgatgtcagacacaacatatgtccaaca 32915574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 44132685 - 44132618
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||   ||||| |||| |||||||||    
T  44132685 agaaaatcacgtaattcagtataattatatgtgtcggtgtcgtgttggtgtcgaacacaacatgtgtc 44132618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 46160912 - 46160959
Alignment:
Q  188 tgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  46160912 tgagaaaataacataattcagtgttattatatgtgtcggtgtcgtgtc 46160959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 13134463 - 13134513
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||| |||||||||||||||| |||||||||||||||| || |||||||||    
T  13134463 atttaagaaaatcacataatttagtgtaattatatgtgtcgatgtcgtgtc 13134513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 24343515 - 24343630
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggaca-cgacatgtgtccaacaccaaaacacgcctaat 278  Q
    |||| |||||||||||| |||||||||||||||||||||      |||||||||||  |||| |||| ||||  |||||| |||||   ||||||||| |    
T  24343515 taataatttgagaaaattacataattcagtgtaattata------ggtgtcgtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctatt 24343608  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    ||||||||| | ||||||||||    
T  24343609 ctgaggagtgtccgtgcttcat 24343630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 33950140 - 33950194
Alignment:
Q  176 ccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||||||| ||||||||||||||||||||| | |||||| ||||||| |||||||    
T  33950140 ccgctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtc 33950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 35723441 - 35723383
Alignment:
Q  175 accgctaatgatttgagaaaat-cacataattcagtgtaattatatgtgacggtgtcgt 232  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||||||| | |||||||    
T  35723441 accgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgtcgt 35723383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 9996853 - 9996898
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||    
T  9996853 atttgagaaaatcacataattcagtataattatatgtctcggtgtc 9996898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 15029771 - 15029824
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||| || ||||||||||||||||||||||||||||  |||||||    
T  15029771 gctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcg 15029824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 40179681 - 40179636
Alignment:
Q  186 tttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||    
T  40179681 tttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcg 40179636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 847955 - 848043
Alignment:
Q  176 ccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacacc 264  Q
    |||||||| |||||||||||| |||||||||| | |||||| | ||| ||||||| |||   |||||||||||| | ||||| ||||||    
T  847955 ccgctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacgaaacgtgtcgaacacc 848043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 7970535 - 7970583
Alignment:
Q  188 tgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||||||    
T  7970535 tgagaaaatcatataattcagtgtaattatatgttttggtgtcgtgtca 7970583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 10499314 - 10499270
Alignment:
Q  187 ttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||    
T  10499314 ttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcg 10499270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 38148781 - 38148741
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaatt 215  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  38148781 accgctaatagtttgagaaaatcacataattcagtgtaatt 38148741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 40742599 - 40742667
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    |||| |||||||||||||| |||||  |||||||||||||||| || |||||||||  |||| ||||||    
T  40742599 taataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcggtgtcagacacg 40742667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 56257939 - 56257996
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaa 237  Q
    |||||| |||||||||||||| |||||||||||||||  |||||| | ||||||||||||    
T  56257939 gctaataatttgagaaaatcatataattcagtgtaat--tatgtgtctgtgtcgtgtcaa 56257996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 1747215 - 1747258
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||    
T  1747215 accgctaataaattgagaaaatcacataattcagtttaattata 1747258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 3712565 - 3712518
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||| ||||||||||||||  ||||||| ||||||||||||||    
T  3712565 accgctaataatttgagaaaatcatgtaattcaatgtaattatatgtg 3712518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 7214574 - 7214523
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||| ||||||||||||||||||||| | |||||||||||| | |||||||    
T  7214574 ctaataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgtc 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 221
Target Start/End: Complemental strand, 8402787 - 8402752
Alignment:
Q  186 tttgagaaaatcacataattcagtgtaattatatgt 221  Q
    ||||||||||||| ||||||||||||||||||||||    
T  8402787 tttgagaaaatcatataattcagtgtaattatatgt 8402752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 28000779 - 28000672
Alignment:
Q  194 aatcacataattcagtgtaattatatgtgacggtgtcgtgtcaa-tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcg 292  Q
    ||||| ||||||||||||||||| | ||| ||||||| |||||| ||| |  ||||||| |||||  ||||| | |||| |||||||||| |||| | ||    
T  28000779 aatcatataattcagtgtaattacaagtgtcggtgtcatgtcaagtgttgttcacgacacgtgtctgacaccgagacacacctaatctgatgagtgtccg 28000680  T
Q  293 tgcttcat 300  Q
    ||||||||    
T  28000679 tgcttcat 28000672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 29205450 - 29205501
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| ||||||    
T  29205450 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 4099974 - 4100038
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaat---tatatgtgacggtgtcgtgtcaatgtcggaca 246  Q
    |||||||| |||||||||||| ||||||||   |||||||| ||||||||||||  |||||||||    
T  4099974 atttgagacaatcacataatttagtgtaataattatatgtgtcggtgtcgtgtctgtgtcggaca 4100038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 12895278 - 12895216
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    ||||||||||||||||| ||| ||| |   |||||||||||| ||||||| ||||||||||||    
T  12895278 tgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcat 12895216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 16184820 - 16184862
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||    
T  16184820 accgctaataatttgagaaaatcacacaattcagtgaaattat 16184862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 17425441 - 17425403
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  17425441 ctaataatttgagaaaatcgcataattcagtgtaattat 17425403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 23292990 - 23292928
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||||||||||||| |||||| |||||   |||||||||||| ||||||| | ||||||||||    
T  23292990 tgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 23292928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 28964301 - 28964263
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  28964301 gctaataatttgaaaaaatcacataattcagtgtaatta 28964263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 999402 - 999357
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||| ||||||| |||||| |||||| ||||||||||||||||    
T  999402 cgctaataatttgagtaaatcatataatttagtgtaattatatgtg 999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 3064959 - 3064926
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattata 218  Q
    |||||||||||||||| |||||||||||||||||    
T  3064959 atttgagaaaatcacacaattcagtgtaattata 3064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 4672138 - 4672085
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| ||||| |||||| |||||||||||||||  |||||||| ||||||||    
T  4672138 gctaataatttgggaaaattacataattcagtgtagctatatgtgtcggtgtcg 4672085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 12895169 - 12895112
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||| ||||||||||||||||  ||||||| | ||| ||||||||||||    
T  12895169 gctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtc 12895112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 21658866 - 21658797
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    ||||| ||||||||||||||||||||| | | ||||| || ||| |||| || ||||| |||||||||||    
T  21658866 ctaataatttgagaaaatcacataatttactataattttaagtgtcggtttcatgtcagtgtcggacacg 21658797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 21945509 - 21945562
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||| ||||| ||||||||||||||||||| | ||| ||||||||    
T  21945509 gctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 21945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 23293039 - 23292986
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||| |||||||||||||||||| |||||| | ||| ||||||||    
T  23293039 gctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 23292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 26504352 - 26504303
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggt 227  Q
    |||||| |||| ||||||||| ||| ||||||||||||||||||| ||||    
T  26504352 gctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcggt 26504303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 30103402 - 30103358
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||    
T  30103402 atttgagaaaatcacataatt-agtgtaatcatatgtgtcggtgtc 30103358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 32910559 - 32910596
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattat 217  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  32910559 taataatttgagaaaatgacataattcagtgtaattat 32910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 35952670 - 35952613
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||| ||||||| |||||||| |||||||||||||  | ||||||||||    
T  35952670 gctaataatttgataaaatcatataattcaatgtaattatatgtatcagtgtcgtgtc 35952613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 300
Target Start/End: Complemental strand, 44081641 - 44081509
Alignment:
Q  167 acacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaa 266  Q
    |||| |||| || |||| |||||| ||||||| |||||| | |||||||||||||| | ||| |||||| || ||  |||||||| |||| | ||||  |    
T  44081641 acaccgatatcgttaataatttgaaaaaatcatataatttaatgtaattatatgtgtcagtgccgtgtc-atatcaaacacgacacgtgttcgacactga 44081543  T
Q  267 aacacgcctaatctgaggagttttcgtgcttcat 300  Q
     ||| | ||||||||| |||| ||||||||||||    
T  44081542 gacatgtctaatctgaagagtgttcgtgcttcat 44081509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 46180982 - 46180945
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  46180982 atttgagaaaataacataattcagtgtaatcatatgtg 46180945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 2234263 - 2234295
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattat 217  Q
    ||||||||||||||||||||||| |||||||||    
T  2234263 atttgagaaaatcacataattcaatgtaattat 2234295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 5225659 - 5225595
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacga 249  Q
    |||||||| ||| |||||||||| || ||| ||||||| |||||||||||   ||||||||||||    
T  5225659 atttgagataatgacataattcaatgcaataatatgtgtcggtgtcgtgttggtgtcggacacga 5225595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 7012069 - 7012141
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacac 247  Q
    |||| |||| |||||||||||| |||||||||||||| || ||| ||  |||||| |||||  ||||||||||    
T  7012069 accgataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcggtgtcggacac 7012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 12797389 - 12797338
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||| ||||||||    
T  12797389 ctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcg 12797338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 31603045 - 31602937
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    |||||||||||||||| |||||| ||||||  ||  ||||||||  ||||  ||||| || |||| | |||||| |||||||||||   ||| ||| |||    
T  31603045 aaaatcacataattcaatgtaatcatatgtttcgaagtcgtgtcggtgtcaaacacggcacgtgttccacaccagaacacgcctaaaaagagtagtgttc 31602946  T
Q  292 gtgcttcat 300  Q
    |||||||||    
T  31602945 gtgcttcat 31602937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 34200327 - 34200295
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattca 207  Q
    ||||||||| |||||||||||||||||||||||    
T  34200327 accgctaataatttgagaaaatcacataattca 34200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 35161054 - 35161082
Alignment:
Q  190 agaaaatcacataattcagtgtaattata 218  Q
    |||||||||||||||||||||||||||||    
T  35161054 agaaaatcacataattcagtgtaattata 35161082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 37698719 - 37698759
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    ||||| |||||||||||| | ||||||||||||||||||||    
T  37698719 ctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 11944673 - 11944793
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||||| |||||||||||| |||||||||||||||||| |||||||||||  |||||  ||||||||||| ||| ||||| | ||||||||||||    
T  11944673 taataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgttgatgtcatacacgacatgtatccgacaccgagacacgcctaatc 11944772  T
Q  280 tgaggagttttcgtgcttcat 300  Q
     || |||| ||||||||||||    
T  11944773 cgatgagtgttcgtgcttcat 11944793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 11927137 - 11927017
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||||||||||   ||||  ||||||||||| ||||||| | | ||||||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcgagacacgcctaatc 11927038  T
Q  280 tgaggagttttcgtgcttcat 300  Q
     || |||| | ||||||||||    
T  11927037 cgatgagtgtccgtgcttcat 11927017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 22651982 - 22652104
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| |||||||||||||||| | |||||| | ||| ||||||||||||  ||||||||||||||||||||| |||||   ||||| ||||    
T  22651982 gctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaa 22652081  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| | ||||||||||    
T  22652082 tccgaggagtgtccgtgcttcat 22652104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 29447162 - 29447041
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| ||||||||||||||||||||||| ||||| || | ||| ||||||| ||||  ||||||||||||||||||||  ||||||  |||||||||||    
T  29447162 ctaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaat 29447063  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    |  |||||| | ||||||||||    
T  29447062 cctaggagtgtccgtgcttcat 29447041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 161 - 300
Target Start/End: Original strand, 21465401 - 21465540
Alignment:
Q  161 gacatgacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaa 260  Q
    |||| |||||||| || |||||| |||||| ||||||| |||||||  |||||||| | |||  |||||||||||| |||||||||||||| ||||||||    
T  21465401 gacacgacacggacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgtccaa 21465500  T
Q  261 caccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||    | ||||||||| |||||||| | ||||||||||    
T  21465501 cacagggatacgcctaatttgaggagtgtccgtgcttcat 21465540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 300
Target Start/End: Complemental strand, 26902216 - 26902106
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttt 289  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||||| |||||   |||    |||||||| ||||||||||| |    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgt 26902117  T
Q  290 tcgtgcttcat 300  Q
     ||||||||||    
T  26902116 ccgtgcttcat 26902106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 39954335 - 39954277
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtg 233  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  39954335 accgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtgccgtg 39954277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 15816181 - 15816060
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||| |||||||||||||| |||||||||||| ||| |||||||||||   |||||||||||||| |  ||| |||||   |||||||||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaat 15816082  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||| ||| | ||||||||||    
T  15816081 ccgagaagtgtccgtgcttcat 15816060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 279
Target Start/End: Complemental strand, 25172751 - 25172650
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||| ||||| || | |||||||||||||| |||||||||||||||||||||||||| | || || ||||| | |||||| ||||    
T  25172751 gctaataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgtcaatgtcggacacgatacgtatcaaacactagaacacgtctaa 25172652  T
Q  278 tc 279  Q
    ||    
T  25172651 tc 25172650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 300
Target Start/End: Original strand, 29447467 - 29447572
Alignment:
Q  195 atcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtg 294  Q
    ||||||||||| ||||||||||||||||  |||||||||||  |||| |||||||||||||||| |||||   ||| | |||||| ||||||| | ||||    
T  29447467 atcacataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtg 29447566  T
Q  295 cttcat 300  Q
    ||||||    
T  29447567 cttcat 29447572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 24362258 - 24362174
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgt-cggacacgacatgtgtcc 258  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||| |  |||||||||  ||| ||||||||||| ||||||    
T  24362258 accgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtccggacacgacacgtgtcc 24362174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 34897088 - 34897144
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || |||||    
T  34897088 accgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 34897144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 258
Target Start/End: Complemental strand, 2572108 - 2572029
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtcc 258  Q
    ||||| |||||| |||||||||||||| |||||||||| | ||| ||||||||||||  |||||||||||||| ||||||    
T  2572108 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgtcc 2572029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 27067350 - 27067233
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    |||||||||||||||||| |||||||||  |||||||| | ||| | ||||||||||  |||||||||||||||||||| ||||||  |  ||| |||||    
T  27067350 ctaatgatttgagaaaattacataattc--tgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtgtcgaacaccgga--acgtctaat 27067255  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||||||| | ||||||||||    
T  27067254 ccgaggagtgtccgtgcttcat 27067233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 29510357 - 29510235
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||||||| |||||||| |||||| | ||| |||||| |||||  |||||||||||||  |||||| |||||   |||| |||||    
T  29510357 gctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaa 29510258  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| | ||||||||||    
T  29510257 tccgaggagtgtccgtgcttcat 29510235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 13844649 - 13844596
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  13844649 gctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 14731701 - 14731762
Alignment:
Q  161 gacatgacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||||||| || || |||||| ||||||||||||||||||||| ||||||||||||||||    
T  14731701 gacatgacacagacactgctaataatttgagaaaatcacataatttagtgtaattatatgtg 14731762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 4611537 - 4611613
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||  |||||  |||||  | ||||||||||||    
T  4611537 accgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtgctgtgtcggtatcggacacgaca 4611613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 4786389 - 4786338
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 14134706 - 14134757
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||| ||||||||||||||||||||||||||||||||||| || |||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 31236630 - 31236580
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtg 228  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  31236630 gctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 3025557 - 3025610
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| | ||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 11803267 - 11803387
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||| |||||||||||||||||||||||||||||||||  ||||| ||||   ||| ||| ||||||  ||||| ||||    ||||| ||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatc 11803366  T
Q  280 tgaggagttttcgtgcttcat 300  Q
     ||||||| | ||||||||||    
T  11803367 cgaggagtgtccgtgcttcat 11803387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 282
Target Start/End: Complemental strand, 12570561 - 12570458
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||| |||||| ||||||||| |||||||||||||||| || ||| || ||  |||| ||||| ||| |||||| ||||||  ||||||||||    
T  12570561 gctaataatttaagaaaaacacataattaagtgtaattatatgtgtcgatgt-gtatcggtgtcagacactacacgtgtccgacaccaggacacgcctaa 12570463  T
Q  278 tctga 282  Q
    |||||    
T  12570462 tctga 12570458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 12606882 - 12606830
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||||| |||||||||||||| |||||||| |||||||||||||| |||||||    
T  12606882 gctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 22197795 - 22197676
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc-gtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgccta 276  Q
    |||||| |||||| ||| |||||||||| |||||||||| | ||| | ||||| |||||  ||||||||| |||| |||||| |||||  | ||||||||    
T  22197795 gctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtcagtgtcg-tgtcggacatgacacgtgtccgacaccggatcacgccta 22197697  T
Q  277 atctgaggagttttcgtgctt 297  Q
    ||||||||||| | |||||||    
T  22197696 atctgaggagtgtccgtgctt 22197676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 25566847 - 25566903
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| |||||||||||    
T  25566847 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 40332180 - 40332248
Alignment:
Q  161 gacatgacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||| |||||||| || || ||| |||||||||||||||||||||||||||||||| | ||| ||||||    
T  40332180 gacacgacacggacactgcaaataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 20679447 - 20679396
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||| |||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 28385032 - 28384977
Alignment:
Q  193 aaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||| |||| ||||||    
T  28385032 aaatctcataattcagtgtaattatatgtgtcggtgtcatgtcagtgtcagacacg 28384977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 33405435 - 33405384
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| ||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcg 33405384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 7658470 - 7658520
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    ||||| |||||||||||| |||||||||||||||||||||| || ||||||    
T  7658470 ctaataatttgagaaaattacataattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 8847277 - 8847315
Alignment:
Q  193 aaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 14634197 - 14634127
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggac 245  Q
    ||||||||  |||| ||||||| | |||||||||||||||||||| ||  ||||||||||| |||||||||    
T  14634197 accgctaacaatttaagaaaattatataattcagtgtaattatatttgttggtgtcgtgtcgatgtcggac 14634127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 16642026 - 16641911
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| ||||||||||  ||||||||| |||||  ||||||||| ||||||||      |||||||||||||||||||| ||||||   |||| ||||||    
T  16642026 ctaataatttgagaaatacacataatttagtgtcgttatatgtgtcggtgtcg------tgtcggacacgacatgtgtctaacaccgggacacacctaat 16641933  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||||||| |  |||||||||    
T  16641932 ccgaggagtgtctgtgcttcat 16641911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 36934673 - 36934747
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacga 249  Q
    ||||||||| ||| || |||||||||||||||| ||||||||||||||  || ||||| || || ||||||||||    
T  36934673 accgctaataattcgaaaaaatcacataattcattgtaattatatgtgttggcgtcgtttcgatatcggacacga 36934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 37283866 - 37283824
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  37283866 accgctaataatctgagaaaatcacataattcagtgtaattat 37283824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 29776042 - 29776116
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgt 254  Q
    |||||| ||||||||||||||| ||||||||| |||||||||||  ||||||   |||| |||||||||| ||||||    
T  29776042 gctaataatttgagaaaatcacgtaattcagtataattatatgt--cggtgttaagtcagtgtcggacacaacatgt 29776116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 4122280 - 4122224
Alignment:
Q  200 ataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgt 256  Q
    |||||||| |||||||||||||| |||||| |||||||||||  |||||||| ||||    
T  4122280 ataattcattgtaattatatgtgtcggtgttgtgtcaatgtcaaacacgacacgtgt 4122224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 4948659 - 4948711
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||| ||||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 4948711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 13203648 - 13203688
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  13203648 ctaataatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 18067990 - 18067954
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgt 211  Q
    ||||||||| |||||||||||||||||||||||||||    
T  18067990 accgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 27213553 - 27213597
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||    
T  27213553 gctaataatttcagaaaatcacataattcactgtaattatatgtg 27213597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 28819199 - 28819319
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| ||||||||||||  ||||| ||| || ||| ||||||| |||| | |||||  |||| ||||||| |||| |||||||||  |||||| ||||||    
T  28819199 taataatttgagaaaatggcataactcaatgcaatcatatgtgtcggttttgtgtcggtgtcagacacgatatgtatccaacaccggaacacggctaatc 28819298  T
Q  280 tgaggagttttcgtgcttcat 300  Q
     ||||||| |  |||||||||    
T  28819299 cgaggagtatatgtgcttcat 28819319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 33382084 - 33382020
Alignment:
Q  166 gacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||||| | |||| |||| |||| ||||||| ||||||||||| ||||||||||||| |||||||    
T  33382084 gacacgaacaccgataataatttaagaaaatgacataattcagagtaattatatgtgtcggtgtc 33382020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 34451077 - 34451033
Alignment:
Q  191 gaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||    
T  34451077 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtc 34451033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 12570790 - 12570684
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    ||||||||| |||| |||||| | ||||||| ||||||||||||| ||  ||||| || ||  |||| ||||| ||| |||||| ||||||  |||||||    
T  12570790 accgctaataatttaagaaaaacgcataattaagtgtaattatatatgttggtgt-gtatcggtgtcagacactacacgtgtccgacaccaggacacgcc 12570692  T
Q  275 taatctga 282  Q
    ||||||||    
T  12570691 taatctga 12570684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 12985400 - 12985451
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| ||||||||||||||||||||||| |||||| |||| || ||||||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcg 12985451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 18964195 - 18964234
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||||||||||||||||| |||||||||||||| ||||||    
T  18964195 agaaaatcacataattcaatgtaattatatgtgtcggtgt 18964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 20785521 - 20785474
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||| ||||||| ||||||||||||| | ||||||||||||||    
T  20785521 accgctaataatttgaggaaatcacataatttaatgtaattatatgtg 20785474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 8342978 - 8343032
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgt 232  Q
    |||||| |||||| |||||||||||||| |||||||||| | ||| |||||||||    
T  8342978 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 8343322 - 8343444
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| |||||||||||||| |||||||||| | ||| | |||||||     |||| ||||||||| |||||| |||||   ||||||||||    
T  8343322 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaa 8343421  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || || |||| |  |||||||||    
T  8343422 tccgaagagtgtctgtgcttcat 8343444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 24858071 - 24858133
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    ||||||||||||||||||||| || ||   |||||||||||| ||||||| || |||||||||    
T  24858071 tgtcggacacgacatgtgtcccacgccgggacacgcctaatcagaggagtgtttgtgcttcat 24858133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 30271344 - 30271286
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    |||||| |||||| ||||||||||||| ||||||||||| | ||| | |||||||||||    
T  30271344 gctaatcatttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcgtgtca 30271286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 34222952 - 34223002
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggt 227  Q
    ||||||| |||| | |||||||||||||| |||||||||||||||| ||||    
T  34222952 cgctaataatttaataaaatcacataattaagtgtaattatatgtgtcggt 34223002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 34201097 - 34201056
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgt 221  Q
    |||| |||||||||||| |||||||||| |||||||||||||    
T  34201097 taataatttgagaaaatgacataattcaatgtaattatatgt 34201056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 926840 - 926788
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| ||||||||||||| |||  ||||||||||||||| ||| ||||||||    
T  926840 ctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgtcg 926788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 7442848 - 7442920
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacac 247  Q
    ||||||||| |||| | ||||| ||||||||||||||||||| | |||  ||||| || ||| ||||||||||    
T  7442848 accgctaataatttcataaaattacataattcagtgtaattacaagtgttggtgttgtatcagtgtcggacac 7442920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 24669436 - 24669492
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||| ||||||| |||| ||||||||||||||||||| | ||| ||||||||    
T  24669436 accgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 43737851 - 43737811
Alignment:
Q  191 gaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||| ||| ||||||||||||||||| ||||||||    
T  43737851 gaaaatcacaaaatacagtgtaattatatgtgtcggtgtcg 43737811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 34185176 - 34185054
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||| | ||||||||| ||||||||||||||| | ||| |||||||||||| |||||||||| ||||||||||| |||||   ||||||||||    
T  34185176 gctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaa 34185077  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| | ||||||||||    
T  34185076 tccgaggagtgtccgtgcttcat 34185054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 7928434 - 7928509
Alignment:
Q  156 gacatgacatgacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| ||||| || ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  7928434 gacatgacaagacaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 15796345 - 15796225
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||||| ||||||| ||||||||||||||||| |  || |||||||||||   |||||||||| ||| ||||||||||||  |||||||||||||    
T  15796345 taataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatc 15796246  T
Q  280 tgaggagttttcgtgcttcat 300  Q
      | |||| ||||||||||||    
T  15796245 caaagagtgttcgtgcttcat 15796225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 8039891 - 8039820
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggaca 246  Q
    ||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||  |||||||||    
T  8039891 accgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 4987344 - 4987222
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||||||||||||||||||||||| | |||  |||| ||||||  ||| |||||||||| |||||| |||||   ||||||||||    
T  4987344 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaa 4987245  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| | ||| ||||||    
T  4987244 tccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 25093510 - 25093561
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  25093510 taatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 25093561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 8383260 - 8383316
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  8383260 accgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 11665949 - 11666029
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||||| |||||| ||||||||| |||| |||||||||||||||| |||||||||||  ||||  ||||||||| |||||    
T  11665949 cgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtc 11666029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 16192806 - 16192730
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||  | |||||||||  |||| |||||||||    
T  16192806 accgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgaca 16192730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 300
Target Start/End: Original strand, 16789032 - 16789139
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    ||||||| ||||||||||||||||||| |||  |||||||||||| ||||||||| ||||  ||||||||| |   |||| |||||| |||||||| | |    
T  16789032 aaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacacatgtccaaca-cgggacacacctaatttgaggagtgtcc 16789130  T
Q  292 gtgcttcat 300  Q
    |||||||||    
T  16789131 gtgcttcat 16789139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 49505210 - 49505154
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 25948946 - 25948883
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||| |||||| |||||| ||||||||||||||||||||||||||| |||  |||||||||||    
T  25948946 gatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtc 25948883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 38731218 - 38731277
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||||| |||| | ||||||||||||||||||||| ||||||||| ||||||||    
T  38731218 gataccgctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcg 38731277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 8789596 - 8789550
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  8789596 atttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcg 8789550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 14832099 - 14832205
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacac 271  Q
    ||||| |||||| |||||| |||||||||||| ||| |||||||| | ||| | ||||||||||  | |||||||||||| |||||| |||||   ||||    
T  14832099 gatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacac 14832198  T
Q  272 gcctaat 278  Q
    |||||||    
T  14832199 gcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 10690323 - 10690274
Alignment:
Q  170 cggataccgctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    |||| ||||||||| || ||||||||||||||||||||||||||||||||    
T  10690323 cggacaccgctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 11313853 - 11313796
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||   ||||||||||    
T  11313853 gctaataatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgtc 11313796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 14209120 - 14209197
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgt 256  Q
    ||||| |||| | ||||||||||||||||||||||||| | ||| | ||||||||||  |||||||||||||| ||||    
T  14209120 ctaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgt 14209197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 41961702 - 41961581
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||| || ||||||| |||| ||||||||| | ||| ||||||||||||  | |||||||||||| |||||| ||||    |||||||||||    
T  41961702 ctaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaat 41961603  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||| ||| | ||||||||||    
T  41961602 ccgagaagtgtccgtgcttcat 41961581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 1550143 - 1550219
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    ||||||||| |||||| |||||||||  |||||||||||||||| ||| | ||||||||||| |||  |||||||||    
T  1550143 accgctaataatttgaaaaaatcacactattcagtgtaattataggtgtcagtgtcgtgtcagtgttcgacacgaca 1550219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 15812876 - 15812803
Alignment:
Q  176 ccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||  || |||||||||||   ||||||||||||||    
T  15812876 ccgcaaataatttgagaaaatcacataactcagtgtaattata--tgccggtgtcgtgttggtgtcggacacgaca 15812803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 11251984 - 11252023
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  11251984 gctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 25064912 - 25064992
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    |||||||||||||||| |||||||||||||| ||||||||  ||||||  ||| ||||||   |||||||||||||| |||||    
T  25064912 accgctaatgatttgaaaaaatcacataatttagtgtaat--tatgtgttggtatcgtgttggtgtcggacacgacacgtgtc 25064992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 28918007 - 28918062
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtg 233  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| ||||||||||    
T  28918007 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 29112332 - 29112285
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacgg 226  Q
    ||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  29112332 ctaattatttgagaaaatcatataattcagtgtaattatatatgacgg 29112285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 29508439 - 29508494
Alignment:
Q  167 acacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||| |||||| ||||| |||||| ||||||| |||||||||||||||||||||||    
T  29508439 acaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtg 29508494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 32804596 - 32804549
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  32804596 accgttaataatttgagaaaatcacataatttagtgtaattatatgtg 32804549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 34307836 - 34307793
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  34307836 accgctaataatttgagaaaatcacatatttcagtgtaattata 34307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 231
Target Start/End: Complemental strand, 40993374 - 40993335
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 40993335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 9624647 - 9624689
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatg 220  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  9624647 gctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 12704014 - 12704056
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgt 221  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  12704014 ctaataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 20691327 - 20691377
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||| |||||||||||| ||||||||||||||||| ||||||| |||||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtc 20691377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 55401130 - 55401192
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||||||||||||| |||||| ||||| | |||||||||||| ||||||| | ||||||||||    
T  55401130 tgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 55401192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 9800047 - 9800168
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||||||||| ||||||||| |||||||| || ||| ||||||||||||  | || || | || | |||||  |||||   |||||||||||    
T  9800047 ctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtcggtatcagagatgatacgtgtcggacacctggacacgcctaat 9800146  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | |||| |||| ||||||||||    
T  9800147 cggaggcgtttccgtgcttcat 9800168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 11493413 - 11493372
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatg 220  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  11493413 ctaataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 298
Target Start/End: Original strand, 14829696 - 14829816
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgt-gtccaacaccaaaacacgccta 276  Q
    |||||| |||||| ||||||||||||||||  ||||||| | ||| ||||||||||||  ||| |||||||| |||| || | |||||   |||||||||    
T  14829696 gctaataatttga-aaaatcacataattcatggtaattacaagtgtcggtgtcgtgtcggtgttggacacgagatgtggttcgacaccgggacacgccta 14829794  T
Q  277 atctgaggagttttcgtgcttc 298  Q
    ||||||||| | | ||||||||    
T  14829795 atctgaggaatgtccgtgcttc 14829816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 15314922 - 15314873
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||||| |||||||||||||| ||||||||||||||||  ||||||||||    
T  15314922 atttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 17005671 - 17005550
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||| ||||||| ||||||||||||||||||| ||| |||||| ||||   |||| ||||  ||| |||||  ||||||  ||||  |||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacaccaggacacctctaat 17005572  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||||||| || |||||||||    
T  17005571 ccgaggagtgtttgtgcttcat 17005550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 35222956 - 35222997
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  35222956 agaaaatcacataattcaatgtaattatatgtgtcggtgtcg 35222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 45451559 - 45451612
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  45451559 gctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcg 45451612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 49651839 - 49651782
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||| |||||||||||||||| |||||||| | ||| ||||||||||||    
T  49651839 gctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtc 49651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 1438817 - 1438853
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgt 221  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1438817 atttgagaaaatcacataattcagtataattatatgt 1438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 7614519 - 7614415
Alignment:
Q  128 tgaaacacaggtacggatacaaacatcagacatgacat-gacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacgg 226  Q
    |||||||| | |||||| ||||| |||||| | ||||  ||||| || || | |||| |||| |||||||||||||||||||| ||||||||| || |||    
T  7614519 tgaaacacggatacggacacaaatatcagatacgacacagacaccgacacagttaataatttaagaaaatcacataattcagtataattatatatgtcgg 7614420  T
Q  227 tgtcg 231  Q
    |||||    
T  7614419 tgtcg 7614415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 28812522 - 28812630
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| ||||||  |||||||||||||||||||| ||| | ||| |||||||||||   |||| ||||||| |  ||||| ||| ||  |||||||||||    
T  28812522 ctaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaat 28812621  T
Q  279 ctgaggagt 287  Q
    | |||||||    
T  28812622 ccgaggagt 28812630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 34910324 - 34910396
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    ||||| |||||| ||||||||||||||||||||||||| | | | ||||||||| ||  ||||||||| ||||    
T  34910324 ctaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatgaca 34910396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 1509528 - 1509599
Alignment:
Q  161 gacatgacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgt 232  Q
    |||| ||||| || || |||||| |||||| |||||||||||||| |||||||||| | ||| |||||||||    
T  1509528 gacaggacactgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 1509599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 4991023 - 4990964
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||||||||  ||||||||||| ||||||||||||||||||| | ||| ||| |||||||    
T  4991023 accgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcggcgtcgtgt 4990964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 5407303 - 5407260
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||    
T  5407303 accgctaaaaatttgagaaaatcacataattcattgtaattata 5407260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 27277891 - 27277852
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  27277891 gctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 48353790 - 48353731
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| ||||| |||||||||||||| |||||| | |||||||||||||  ||||||||    
T  48353790 gataccactaataatttgagaaaatcaaataattaattgtaattatatgtatcggtgtcg 48353731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 4469851 - 4469897
Alignment:
Q  173 ataccgctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    ||||||| ||| |||| |||||||||||||||||||||||| |||||    
T  4469851 ataccgccaataatttaagaaaatcacataattcagtgtaagtatat 4469897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 231
Target Start/End: Complemental strand, 6780465 - 6780419
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||||||| || |||||||||||||||||||  |||||||    
T  6780465 atttgagaaaatcacgtagttcagtgtaattatatgtgttggtgtcg 6780419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 221
Target Start/End: Complemental strand, 11507515 - 11507485
Alignment:
Q  191 gaaaatcacataattcagtgtaattatatgt 221  Q
    |||||||||||||||||||||||||||||||    
T  11507515 gaaaatcacataattcagtgtaattatatgt 11507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 11658823 - 11658865
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||    
T  11658823 taataatttgagaaaatcgcataattcagtgtgattatatgtg 11658865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 14028025 - 14028067
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgt 232  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||    
T  14028025 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgt 14028067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 14840342 - 14840304
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattata 218  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  14840342 taataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 25211552 - 25211602
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| |||||| | || |||||||||||||||| ||||||||||||    
T  25211552 atttgagaatatcacacagttaagtgtaattatatgtgtcggtgtcgtgtc 25211602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 26508116 - 26508154
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26508116 gctaataatttgaaaaaatcacataattcagtgtaatta 26508154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 286
Target Start/End: Complemental strand, 46190991 - 46190929
Alignment:
Q  224 cggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggag 286  Q
    ||||||||||||| |||||||||||| |||| || |||||||  |||| ||||||| ||||||    
T  46190991 cggtgtcgtgtcagtgtcggacacgatatgtatctaacaccatgacacacctaatccgaggag 46190929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 2941576 - 2941617
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||    
T  2941576 agaaaatcacaaaatacagtgtaattatatgtgtcggtgtcg 2941617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 13414487 - 13414528
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||||||| |||||||||||||| ||||||||    
T  13414487 agaaaatcaaataattcaatgtaattatatgtgtcggtgtcg 13414528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 13807182 - 13807227
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||||||||||||||||| | |||| ||||||| |||||||    
T  13807182 atttgagaaaatcacataattcaatataataatatgtgtcggtgtc 13807227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 13845566 - 13845525
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||    
T  13845566 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 13845525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 14216915 - 14216976
Alignment:
Q  195 atcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgt 256  Q
    |||| ||||||||||||||||| | ||| | ||||||||| | |||||||||||||| ||||    
T  14216915 atcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgt 14216976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 14223044 - 14223105
Alignment:
Q  195 atcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgt 256  Q
    |||| ||||||||||||||||| | ||| | ||||||||| | |||||||||||||| ||||    
T  14223044 atcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgt 14223105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 14979187 - 14979224
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaatt 215  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  14979187 gctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 32429434 - 32429393
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    ||||||| |||| ||||||||||||||||||||| |||||||    
T  32429434 cgctaataatttaagaaaatcacataattcagtgcaattata 32429393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 39002045 - 39002094
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||||| |||||||||||||||| ||||||||||| || | |||||||||    
T  39002045 atttgaaaaaatcacataattcaatgtaattatatatgtcagtgtcgtgt 39002094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 51206406 - 51206353
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||| |||||||||||||||||||||| || | ||| ||||||||    
T  51206406 gctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcg 51206353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 2731830 - 2731862
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||||||||||||| ||||||||||||||||    
T  2731830 agaaaatcacataattaagtgtaattatatgtg 2731862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 4201399 - 4201443
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    |||| |||| |||||| |||||||||||||| |||||||||||||    
T  4201399 accgttaataatttgaaaaaatcacataattaagtgtaattatat 4201443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 4466656 - 4466600
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||| |||| ||||||||| |||||||||||||  |||||||| ||||||||    
T  4466656 accggtaataatttaagaaaatcatataattcagtgtagctatatgtgccggtgtcg 4466600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 10455796 - 10455852
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||||| || ||||||||||| |||| | ||||||||||||||||  ||||||||||    
T  10455796 gctaataatatgagaaaatcatataactaagtgtaattatatgtgttggtgtcgtgt 10455852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 10954959 - 10955011
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||||| ||||||||||||||||||||||| | | ||| ||||||||    
T  10954959 ctaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcg 10955011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 18426956 - 18427008
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||| | ||||||||||||||| |||||||||||| || ||||||||    
T  18426956 ctaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcg 18427008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 21559398 - 21559362
Alignment:
Q  247 cgacatgtgtccaacaccaaaacacgcctaatctgag 283  Q
    |||| |||||||||||||||||||| |||||||||||    
T  21559398 cgacctgtgtccaacaccaaaacacacctaatctgag 21559362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 26290379 - 26290431
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgt 232  Q
    |||| |||||||||||||||||| ||| || |||||||||||| | |||||||    
T  26290379 taataatttgagaaaatcacatagttcggtttaattatatgtgtcagtgtcgt 26290431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 28678309 - 28678365
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||||| |||| | |||||||||||||| ||| ||||| |||||| |||||||||||    
T  28678309 gctaataatttaataaaatcacataatttagtataattgtatgtgtcggtgtcgtgt 28678365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 30994935 - 30994895
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    |||||| |||| ||||||||||| |||||||||||||||||    
T  30994935 gctaataatttaagaaaatcacacaattcagtgtaattata 30994895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 48202314 - 48202278
Alignment:
Q  186 tttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||||||||||||||||| | ||||||||||||||    
T  48202314 tttgagaaaatcacataatttaatgtaattatatgtg 48202278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 300
Target Start/End: Original strand, 32308123 - 32308248
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||| | ||||||||||  ||| ||||||||||  ||||| ||||| | ||||  |    
T  32308123 accgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccgagacacagc 32308222  T
Q  275 taatctgaggagttttcgtgcttcat 300  Q
    ||||| ||||||| ||| ||||||||    
T  32308223 taatccgaggagtgttcatgcttcat 32308248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 24339648 - 24339770
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| ||||||||||||  |||||||||||||| || ||| |||||   ||||||||||    
T  24339648 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaa 24339747  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || |||||||   ||||||||||    
T  24339748 tccgaggagtgcccgtgcttcat 24339770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 6630964 - 6630856
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||||||| |||| |||||||||||||||||||||| || ||||||||   |||||||||| ||| ||| || ||||||| |||| ||||||    
T  6630964 ctaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtgcccgacaccaagacacacctaat 6630865  T
Q  279 ctgaggagt 287  Q
    |||||||||    
T  6630864 ctgaggagt 6630856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 300
Target Start/End: Original strand, 1433457 - 1433576
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    |||| |||| ||||||||||||||||| |||  ||||||||||||||| ||||||||      ||||||||| ||||||||||| ||||||  ||||| |    
T  1433457 accgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcg------tgtcggacaagacatgtgtccgacaccaggacacgtc 1433550  T
Q  275 taatctgaggagttttcgtgcttcat 300  Q
    ||||| ||||||| | ||||||||||    
T  1433551 taatccgaggagtgtccgtgcttcat 1433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 22602756 - 22602706
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 22602706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 300
Target Start/End: Complemental strand, 5409895 - 5409773
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacac 271  Q
    ||||| |||||| |||||| ||||||||||||||||||| ||||| | ||| ||||||||      |||||||||||||| |||||| |||||   ||||    
T  5409895 gatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcg------tgtcggacacgacacgtgtccgacaccgggacac 5409802  T
Q  272 gcctaatctgaggagttttcgtgcttcat 300  Q
    |||||||| ||||||| | ||||||||||    
T  5409801 gcctaatccgaggagtgtccgtgcttcat 5409773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 16341490 - 16341559
Alignment:
Q  166 gacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||||| || | |||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  16341490 gacacggacactgataataatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgtc 16341559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 9408385 - 9408265
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||||| |||||||||||||| |||||||||| | ||| ||||||||| ||  |||| ||||||| || | ||| ||||||||||||||||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacgatatatatccgacaccaaaacacgcctaatc 9408286  T
Q  280 tgaggagttttcgtgcttcat 300  Q
     || || | | ||||||||||    
T  9408285 cgaagaatgtccgtgcttcat 9408265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 20549794 - 20549850
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||    
T  20549794 accgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 7328750 - 7328687
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||| |||||| |||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  7328750 gatactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgtc 7328687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 17851431 - 17851481
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  17851431 gataccgctaataattttagaaaatcacataattcagtgtaattatatgtg 17851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 26329433 - 26329355
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtcc 258  Q
    |||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||  |||| ||||||||| ||||||    
T  26329433 taataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgtcc 26329355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 11665492 - 11665371
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||| |||||||||||||||||| |||||||| ||| || |||| ||||  ||||| |||||||| |||||| ||||| ||||||  |||||    
T  11665492 ctaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgacaccgaaacacatctaat 11665393  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
      ||||| | | ||||||||||    
T  11665392 acgaggaatgtccgtgcttcat 11665371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 300
Target Start/End: Original strand, 2334270 - 2334377
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    |||||||||||||| |||||||||| | ||| ||||||||||||  ||||||||||||||  ||||| ||||  ||||||| |||||| ||||||| | |    
T  2334270 aaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc-gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtcc 2334368  T
Q  292 gtgcttcat 300  Q
    ||| |||||    
T  2334369 gtgtttcat 2334377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 5548679 - 5548739
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| || |||||||||||||| ||||||||||||||||||||||| | ||||||||||    
T  5548679 accgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtc 5548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 15902830 - 15902901
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    |||| |||||| |||||||||||||| |||||||||||||||| |||||| |||||  | ||||||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgaca 15902901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 19206053 - 19206108
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||| |||||||    
T  19206053 accgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 42720985 - 42720899
Alignment:
Q  139 tacggatacaaacatcagacatgaca-tgacacg--gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||| ||| ||||||||||||||| |||||||  || ||||||||| |||||| |||||||||||||| | ||||||||||||||    
T  42720985 tacggacacagacatcagacatgacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtg 42720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 9482947 - 9482993
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  9482947 atttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 9482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 17307906 - 17307956
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  17307906 atttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtc 17307956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 19992007 - 19992061
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgt 232  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  19992007 gctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgt 19992061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 282
Target Start/End: Original strand, 21560523 - 21560613
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctga 282  Q
    ||||||||||||||||||||||||| | ||| ||||||||| ||  ||||  |||||| |  |||| |||||| |||||||||||||||||    
T  21560523 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtcaaacacgatacatgtctaacaccgaaacacgcctaatctga 21560613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 26033514 - 26033392
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| |||| |||||||  |||| |||| |||| |||||| | |||   |||| |||||    
T  26033514 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaa 26033415  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| | |||| |||||    
T  26033414 tccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 29787425 - 29787383
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  29787425 accgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 3721099 - 3721152
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  3721099 gctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcg 3721152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 27945048 - 27945105
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    ||||| |||||||||||| ||||||||||||||||||| | ||| |||||||||||||    
T  27945048 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtca 27945105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 2424619 - 2424659
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 5835261 - 5835305
Alignment:
Q  186 tttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||    
T  5835261 tttgagaaaataacataattcagtgtaattatatgtgtcggtgtc 5835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 26733307 - 26733363
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||||| |||||||||||||||||| |||||| ||||| ||||||||    
T  26733307 accgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcg 26733363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 32287519 - 32287463
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| || ||||||||||||||||||||||| || |||||||| ||||||||    
T  32287519 accgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgtcg 32287463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 1415578 - 1415697
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||||| ||||| ||| || ||| |||||| ||||||  |||||||||||||||||||||||||| |||| || |||| | | | || |||||||    
T  1415578 taataatttgaaaaaatgacacaaatcaatgtaatcatatgtttcggtgtcgtgtcaatgtcggacacgatatgtatctaacatcgagagacacctaatc 1415677  T
Q  280 tgaggagttttcgtgcttca 299  Q
     || |||| || ||||||||    
T  1415678 cgaagagtatttgtgcttca 1415697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 22868049 - 22868092
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||| || |||||||||||||||||||||||||||||||||||    
T  22868049 ctaataatatgagaaaatcacataattcagtgtaattatatgtg 22868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 43027522 - 43027406
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||||||||||| |||||||| || | ||| |||||||||||||      ||||||||| |||||| |||||   ||||||||||    
T  43027522 gctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtca------gacacgacacgtgtccgacaccgggacacgcctaa 43027429  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || || |||| | ||||||||||    
T  43027428 tccgatgagtgtccgtgcttcat 43027406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 49107824 - 49107882
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    ||||||||| ||||||||||| ||||||||| ||||| |||||||||| |||||||||||    
T  49107824 accgctaataatttgagaaaa-cacataattgagtgtgattatatgtgtcggtgtcgtgt 49107882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 1401025 - 1401071
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||||    
T  1401025 gatatcgctaataatttgagaaactcacataattcagtgtaattata 1401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 8160410 - 8160492
Alignment:
Q  166 gacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    ||||| || ||||||||| |||| ||||||| |||||||| ||||||||||||||||  ||| |||||||  ||||| |||||    
T  8160410 gacactgacaccgctaataatttaagaaaattacataatttagtgtaattatatgtgttggtatcgtgtcggtgtcgaacacg 8160492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 14729704 - 14729746
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  14729704 accgctaataatttgagaaaatcacgtaattcagtgtaattat 14729746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 21880157 - 21880211
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||| |||||||||||| ||||||||||||||||||| | ||| ||||||||    
T  21880157 cgctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 21880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 23191899 - 23191945
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgt 221  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  23191899 accgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 27093469 - 27093415
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||| | ||||||    
T  27093469 accgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 27184832 - 27184886
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||| | ||||||    
T  27184832 accgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 27229350 - 27229264
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    |||||||||||||| |||||||||||| ||  ||||||||||||| |||| ||||||| | |||| | |||| |  |||||||||||    
T  27229350 aaaatcacataatttagtgtaattataagtatcggtgtcgtgtcactgtcagacacgatacgtgttcgacactaggacacgcctaat 27229264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 35297723 - 35297669
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||| ||||||||||||||||||||||| | ||||||||||||  ||||||||||    
T  35297723 taataatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgt 35297669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 48246859 - 48246793
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    |||||||||||||||| || ||| |||||||||||    ||||||| ||||||||||||||||||||    
T  48246859 atttgagaaaatcacacaactcaatgtaattatataaaccggtgtcatgtcaatgtcggacacgaca 48246793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 640134 - 640171
Alignment:
Q  193 aaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||||||||||||||||||||||||||||| |||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggtgtc 640171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 3520398 - 3520345
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtg 228  Q
    |||| |||| |||||||||||||| |||||||| |||||||||||||| |||||    
T  3520398 accgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 18213074 - 18213033
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  18213074 agaaaatcacataatttagtgtaattatatgtgtcggtgtcg 18213033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 39138462 - 39138503
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggtgtcg 39138503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 5233624 - 5233692
Alignment:
Q  167 acacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||| ||||| | |||| ||||||||||||||||||||  ||||||||||||||||  ||||| |||||    
T  5233624 acaccgatacggttaataatttgagaaaatcacataatctagtgtaattatatgtgttggtgttgtgtc 5233692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 300
Target Start/End: Original strand, 9778513 - 9778622
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgagg 284  Q
    |||||| |||||||||||||||||| |||||| | ||| ||||||||      |||||||||| ||| |||||| |||||   ||||||||||||  |||    
T  9778513 atttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg------tgtcggacacaacacgtgtccgacaccgggacacgcctaatccaagg 9778606  T
Q  285 agttttcgtgcttcat 300  Q
    ||| | ||||||||||    
T  9778607 agtgtccgtgcttcat 9778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 18013126 - 18013070
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||| |||| | ||||| ||||||||||||||||||||||||| | ||||||||||    
T  18013126 ctaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgtc 18013070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 19930987 - 19930931
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtc 241  Q
    |||||| ||||| |||||||||| |||||||||||||| || | |||||||||||||    
T  19930987 atttgataaaatgacataattcaatgtaattatatgtgtcgatatcgtgtcaatgtc 19930931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 24146822 - 24146874
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||||| |||| |||||||||||||||||| | |||||||||||| |||||||    
T  24146822 gctaataattttagaaaatcacataattcaatataattatatgtgtcggtgtc 24146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 28155573 - 28155629
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||||||||||| ||||||||| ||||||||| | ||| ||||||||    
T  28155573 accgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcg 28155629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 30731040 - 30731080
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaatt 215  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  30731040 accgcgaataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 12289120 - 12289159
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  12289120 gctaataatttgagaaaatcacataattcagtggaattat 12289159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 18039019 - 18039062
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||    
T  18039019 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 18039062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 22484028 - 22484083
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||| |||| |||||||  ||||||||||| |||||||||||| |||||||    
T  22484028 accgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtc 22484083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 25791656 - 25791714
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    ||||||||| |||||||||| ||||||||| || |||| ||||||||| |||||||||||    
T  25791656 accgctaattatttgagaaattcacataat-caatgtagttatatgtgtcggtgtcgtgt 25791714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 27732290 - 27732243
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggt 227  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| ||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 11272634 - 11272569
Alignment:
Q  185 atttgagaaaatcacata--attcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    |||||| |||||||||||  |||||||||||||| | ||| ||||||||||||  |||||||||||    
T  11272634 atttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 11272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 12278843 - 12278885
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||| |||| ||||||| |||||||||||||||||||||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtg 12278885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 23128712 - 23128658
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||| ||||||||||| || ||||||||||||||| ||||||| |||||| ||||    
T  23128712 taataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgt 23128658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 25481908 - 25481946
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  25481908 gctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 30813818 - 30813856
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  30813818 gctaataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 2425789 - 2425736
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtg 228  Q
    |||| |||| ||||||||||||||||||||| |||| || |||||||| |||||    
T  2425789 accgttaataatttgagaaaatcacataattaagtggaactatatgtgtcggtg 2425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 2948686 - 2948739
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtg 228  Q
    |||||| || |||| |||||||||| ||||| |||||||||||||||| |||||    
T  2948686 accgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcggtg 2948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 3991331 - 3991384
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgt 232  Q
    ||||| |||||| |||||||||||||||||| |||||| | ||| |||||||||    
T  3991331 ctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgt 3991384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 279
Target Start/End: Original strand, 4794915 - 4794996
Alignment:
Q  198 acataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    ||||||||||||||||||||| ||| ||||  ||| ||  |||||||||||||| || ||  ||||| ||||||| ||||||    
T  4794915 acataattcagtgtaattataagtgtcggtaccgtatcggtgtcggacacgacacgtatctgacacctaaacacgtctaatc 4794996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 293
Target Start/End: Original strand, 6028633 - 6028746
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||||| || || |||||||| | |||||||| |  || ||||||||||||| ||||| |||||||| | || | ||||  | ||||||||||||    
T  6028633 taataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaacacgacacgagttcgacactgagacacgcctaatc 6028732  T
Q  280 tgaggagttttcgt 293  Q
    ||| |||| |||||    
T  6028733 tgaagagtattcgt 6028746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 11890984 - 11890915
Alignment:
Q  166 gacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||| ||||| | |||| |||||| ||||||| ||||||||||||||||||  |||  |||||||||||    
T  11890984 gacactgatacggttaataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcgtgtc 11890915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 18215239 - 18215182
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||| ||||||||||||| ||||||| ||| | ||| ||||||||||||    
T  18215239 gctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtc 18215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 18233644 - 18233611
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattata 218  Q
    |||||||||||| |||||||||||||||||||||    
T  18233644 atttgagaaaatgacataattcagtgtaattata 18233611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 23849509 - 23849460
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||| |||| |||||| ||||||||||||| |||||||||||| ||||||    
T  23849509 taataatttaagaaaaacacataattcagtataattatatgtgtcggtgt 23849460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 5235989 - 5236049
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| |||| ||||||| | |||||| ||||||||||||| |  ||||||||||||    
T  5235989 accgctaataatttaagaaaattatataatttagtgtaattatatatatcggtgtcgtgtc 5236049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 7438714 - 7438834
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||||| |||||||||||||||| |||||||| | ||| ||||||| ||||  ||||  ||||||||  ||| | |||| |  |||||||||||     
T  7438714 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaatt 7438813  T
Q  280 tgaggagttttcgtgcttcat 300  Q
      |||||| | ||||||||||    
T  7438814 caaggagtgtccgtgcttcat 7438834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 7758329 - 7758385
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||| |||| ||||||| | |||||||||| ||||||| |||| ||||||||||||    
T  7758329 ctaataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgtc 7758385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 9949100 - 9949064
Alignment:
Q  202 aattcagtgtaattatatgtgacggtgtcgtgtcaat 238  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  9949100 aattcagtgtaattatatgtgtcggtgtcgcgtcaat 9949064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 21141034 - 21140978
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||| |||| ||||||||| |||||||||||| |||||| ||| ||| ||||||||    
T  21141034 ctaataatttaagaaaatcatataattcagtgtgattataggtgtcggagtcgtgtc 21140978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 37870900 - 37870952
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| ||||||||||||||||| |||  |||||||||| |||| ||||||||    
T  37870900 ctaatcatttgagaaaatcacatgatttcgtgtaattatgtgtgtcggtgtcg 37870952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 38134462 - 38134410
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggt 227  Q
    |||| |||| |||||||||||| |||||||||| |||||| ||||||| ||||    
T  38134462 accgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcggt 38134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 9828051 - 9828172
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||| |||||||||||||||||||||||| |||||| ||||||||||||  |||| ||||||||| |||||| |||||   ||||| |||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaat 9828150  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||||||| | ||||||||||    
T  9828151 ccgaggagtgtccgtgcttcat 9828172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 279
Target Start/End: Complemental strand, 6612222 - 6612123
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||||| ||||| ||||||||||||||||||| | ||| |||||||||||| ||||||||||||| |||||||| ||||||  ||||||||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatc 6612123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 44482234 - 44482309
Alignment:
Q  176 ccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgaca 44482309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 25361899 - 25361968
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgt 254  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||||||||    
T  25361899 atttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgacatgt 25361968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 300
Target Start/End: Original strand, 5944303 - 5944411
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||| |||  ||||| |||||   | |||||||||| ||||||| |||    
T  5944303 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttc 5944402  T
Q  292 gtgcttcat 300  Q
    |||||||||    
T  5944403 gtgcttcat 5944411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 287
Target Start/End: Complemental strand, 17831587 - 17831477
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggaca-cgacatgtgtccaacaccaaaacacgc 273  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||||||| |   ||||||||| ||||||||| |||||||||||| |||||   ||||||    
T  17831587 accgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtc---gtcgtgtcagtgtcggacaccgacatgtgtccgacaccgggacacgc 17831491  T
Q  274 ctaatctgaggagt 287  Q
    ||||||| ||||||    
T  17831490 ctaatcttaggagt 17831477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 34371708 - 34371801
Alignment:
Q  166 gacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaa 260  Q
    ||||| || ||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||   ||||||| |||||| ||||||||    
T  34371708 gacactgacaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgtccaa 34371801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 9629956 - 9629867
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacacc 264  Q
    ||||||||| |||||| ||||||| |||||||||||| |||||| ||| |||||||||||| |||||||||||||||  ||||| |||||    
T  9629956 accgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacacc 9629867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 1486762 - 1486646
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||      |||||||||||||| |||||| |||||   ||||||||||    
T  1486762 gctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg------tgtcggacacgacacgtgtccgacaccgggacacgcctaa 1486669  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| |  |||||||||    
T  1486668 tccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 7918263 - 7918205
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaa 237  Q
    ||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcaa 7918205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 5376556 - 5376483
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    ||||||||| |||| ||||||| ||||||||||||||||||| | ||| |||||||||||| ||||||||||||    
T  5376556 accgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 6427353 - 6427414
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  6427353 accgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtca 6427414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 20157406 - 20157346
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  20157406 accgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtc 20157346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 31694749 - 31694641
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    |||||||||||||||||| |||||| | ||| ||||||||||||  |||||||||| |||  | | | |||||  ||||||||||||||||||||| | |    
T  31694749 aaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtcc 31694650  T
Q  292 gtgcttcat 300  Q
    |||||||||    
T  31694649 gtgcttcat 31694641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 300
Target Start/End: Original strand, 47989517 - 47989625
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||  ||||||||||||||  ||||  ||| |   |||||||||||| ||||||| | |    
T  47989517 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtcc 47989616  T
Q  292 gtgcttcat 300  Q
    |||||||||    
T  47989617 gtgcttcat 47989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 36878464 - 36878519
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||    
T  36878464 accgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 36906000 - 36906075
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgac 250  Q
    ||||||||| || ||||||||||||||||||||| |||||||||||||  || || |||||| |||||||||||||    
T  36906000 accgctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtcagtgtcggacacgac 36906075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 229
Target Start/End: Complemental strand, 1864931 - 1864882
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 300
Target Start/End: Original strand, 17754314 - 17754439
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    ||||||||| |||||| ||||| |||||||||||||||| |||||||| | |||| |||||  ||| |||||| |||| |||| ||||||| | ||||      
T  17754314 accgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaacatatgtctaacaccagagcacgga 17754413  T
Q  275 taatctgaggagttttcgtgcttcat 300  Q
    || ||  |||||| ||||||||||||    
T  17754414 tagtccaaggagtgttcgtgcttcat 17754439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 21038084 - 21038161
Alignment:
Q  173 ataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgac 250  Q
    ||||||||||| |||| ||||||| ||||||||||||||||| ||||| | | ||||||||||  |||||||||||||    
T  21038084 ataccgctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggacacgac 21038161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 27471630 - 27471533
Alignment:
Q  167 acacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacacc 264  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||||||| |||||  |||||| | ||  ||| ||| |||||| |||||| |||||    
T  27471630 acaccgataccgctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtcatatcggtgttggatacgacacgtgtccgacacc 27471533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 40181877 - 40181930
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  40181877 gctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcg 40181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 6415055 - 6414976
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||||| |||||||||||||||||||| |||| |||||| ||||| ||||||| | || ||||||||||||||| |||||    
T  6415055 cgctaattatttgagaaaatcacataatacagtttaattagatgtgtcggtgtcat-tcgatgtcggacacgacacgtgtc 6414976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 9709823 - 9709879
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||    
T  9709823 accgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcg 9709879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 38503323 - 38503383
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||| ||||    
T  38503323 accgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtc 38503383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 12443513 - 12443466
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacg 225  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  12443513 gctaataatttgagaaaatcacataattcagtgtaattgtatgtgacg 12443466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 25098611 - 25098564
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  25098611 accgctgataatttgagaaaatcacataattcagtgtaattatatgtg 25098564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 25934634 - 25934701
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||||||||| ||| ||||||||||||||||| |||| |||||||  |||||||||||||| |||||    
T  25934634 agaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtc 25934701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 280
Target Start/End: Original strand, 12993197 - 12993302
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    ||||||||| ||||  | |||| || ||||||| ||||||||||| || |||||| |||||||||| ||||| ||||| ||||| ||||| ||| ||||     
T  12993197 accgctaataatttacgtaaattacgtaattcaatgtaattatatatgtcggtgttgtgtcaatgttggacatgacatatgtccgacaccgaaatacgca 12993296  T
Q  275 taatct 280  Q
    ||||||    
T  12993297 taatct 12993302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 19324575 - 19324612
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19324575 atttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 25272495 - 25272544
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  25272495 atttgagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 30749858 - 30749899
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 30749899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 30771309 - 30771350
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 30771350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 34712436 - 34712379
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||||||||| |||||||| |||||||||||||||| | ||||||||||    
T  34712436 gctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtc 34712379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 300
Target Start/End: Original strand, 6427484 - 6427592
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    |||||||||||||||| ||||| || | ||| | |||||||||    ||||||||||||| |||||| |||||   ||||||||||||||| |||| | |    
T  6427484 aaaatcacataattcaatgtaactacaagtgtcagtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtcc 6427583  T
Q  292 gtgcttcat 300  Q
    |||||||||    
T  6427584 gtgcttcat 6427592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 14332694 - 14332642
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| ||||||||||||||||||||| |||||||||||||||  ||||||||    
T  14332694 ctaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcg 14332642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 24577238 - 24577182
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||| ||||||||||||    
T  24577238 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 28273140 - 28273068
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    ||||| |||||| ||||||| ||||||||||||||||| | ||| ||||||| | || |||||||||||||||    
T  28273140 ctaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtcctatcgatgtcggacacgaca 28273068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 39953202 - 39953146
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||| |||||||||||||||| ||||||||| |||||| ||||||||    
T  39953202 accgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcg 39953146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 40285710 - 40285650
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| ||||||||||||| |||||||||||||| | ||||||| || |||||||||    
T  40285710 accgctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcgtgtc 40285650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 398821 - 398778
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  398821 accgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 2896177 - 2896122
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||| || |||||||    
T  2896177 accgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtc 2896122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 5898322 - 5898267
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||| | |||||||    
T  5898322 accgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtc 5898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 222
Target Start/End: Original strand, 10233268 - 10233303
Alignment:
Q  187 ttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||||||||||||||||||||||||||||||    
T  10233268 ttgagaaaatcacataattcagtgtaattatatgtg 10233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 10572641 - 10572586
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||| |||||| ||||    
T  10572641 ctaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgt 10572586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 16297285 - 16297222
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcatc 301  Q
    ||||||||||||| ||||||| ||||||  |||||||||||| ||||||| | |||||||||||    
T  16297285 tgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcatc 16297222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 17425157 - 17425102
Alignment:
Q  167 acacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||| |||| |||| |||||| |||||||||||||||| ||||||||||||||    
T  17425157 acacggacaccgataataatttgataaaatcacataattcaatgtaattatatgtg 17425102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 34298443 - 34298482
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  34298443 ctaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 40917757 - 40917877
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| |||||||||  ||| |||||||||| | ||  ||||||||||||  ||| |||||||||| |||||| |||||   ||||||||||    
T  40917757 gctaataatttgaaaaaatcaca--attaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaa 40917854  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||| | | ||||||||||    
T  40917855 tccgaggactgtccgtgcttcat 40917877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 52903249 - 52903308
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||| |||| |||| | ||||||| ||||||||||||||||||||||| ||||||||    
T  52903249 gataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcg 52903308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 1705044 - 1704986
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaa 237  Q
    ||||| |||||| ||||||||||||||||| ||||||| | ||| ||||||||||||||    
T  1705044 ctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtcaa 1704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 13997886 - 13997940
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||| |||| |||| | ||||||||||||||||||||||||||||||| ||||||    
T  13997886 accgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 31015049 - 31015087
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  31015049 gctaataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 38078665 - 38078603
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    ||||||||||||||  ||| ||||||||  |||||||||||| ||||||| ||||||||||||    
T  38078665 tgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcat 38078603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 113305 - 113362
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||| ||||||||||||||||||||||||| | |||  |||||||||||    
T  113305 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc 113362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 13436464 - 13436517
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||| || ||||||||||||||||||||||||||||||  |||||||    
T  13436464 gctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcg 13436517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 23636095 - 23636050
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||    
T  23636095 atttgagaaaattacataattcagtgtaattgtatgtgtcggtgtc 23636050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 38076023 - 38075970
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| ||||||| ||||||||||| |||||||||| ||||||| ||||||||    
T  38076023 gctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgtcg 38075970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 19562674 - 19562630
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||| ||||||||||||| |||| |||||||||||||||||||    
T  19562674 gctaataatttgagaaaatctcatagttcagtgtaattatatgtg 19562630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 41877526 - 41877470
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||||||||||| |||||||| |||||||||| | ||| ||||||||    
T  41877526 accgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcg 41877470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 279
Target Start/End: Complemental strand, 16164366 - 16164267
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| |||||| |||||||||||||| | |||||||||||||| |  ||||||||   ||| |||| | ||| |||||| ||||||  ||||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatc 16164267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 222
Target Start/End: Complemental strand, 17705626 - 17705595
Alignment:
Q  191 gaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||||||||||||||||||||||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtg 17705595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 25452201 - 25452162
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  25452201 gctaataatttgagaaaatctcataattcagtgtaattat 25452162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 26238168 - 26238129
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaat 214  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  26238168 accgctaataatttgagaaaataacataattcagtgtaat 26238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 29229450 - 29229521
Alignment:
Q  161 gacatgacacggataccgctaatgatttgagaaaatcacataattcagt-gtaattatatgtgacggtgtcg 231  Q
    |||| ||||| || || |||||| ||||||||||||||||| ||| ||| ||||||||||||| ||||||||    
T  29229450 gacacgacactgacactgctaataatttgagaaaatcacatgatttagtggtaattatatgtgtcggtgtcg 29229521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 35919315 - 35919272
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||    
T  35919315 aaaatcacataattcagtgtaattataagtgtccgtgtcgtgtc 35919272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 12713379 - 12713337
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgt 221  Q
    ||||| |||| |||||||||||||||| |||||||||||||||    
T  12713379 ctaataatttaagaaaatcacataatttagtgtaattatatgt 12713337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 12717470 - 12717428
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgt 221  Q
    ||||| |||| |||||||||||||||| |||||||||||||||    
T  12717470 ctaataatttaagaaaatcacataatttagtgtaattatatgt 12717428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 18337342 - 18337388
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| ||||||||||||||||||||||||| | ||| ||||||||    
T  18337342 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 18337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 40258984 - 40258934
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||| |||||| ||||||||||||||||||||||||| | ||| |||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 48148076 - 48148034
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    ||||||| |||||||||||||||||||| || |||||||||||    
T  48148076 aaaatcatataattcagtgtaattatatatgtcggtgtcgtgt 48148034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 51410080 - 51410142
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||||||||||||| || ||| ||||| | ||||||||||||  |||||| ||||||||||||    
T  51410080 tgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcat 51410142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 2784569 - 2784614
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||| |||||||||||||||| ||| |||||||||||| |||||||    
T  2784569 atttaagaaaatcacataattgagtataattatatgtgtcggtgtc 2784614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 5927351 - 5927282
Alignment:
Q  231 gtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||||| ||||||||| ||||  ||||| ||| | ||||| |||||||||||||||| | ||||||||||    
T  5927351 gtgtcagtgtcggacatgacaaatgtccgacatcgaaacatgcctaatctgaggagtgtccgtgcttcat 5927282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 16927238 - 16927197
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    |||||| |||||| ||||||| ||||||||||||||||||||    
T  16927238 gctaataatttgaaaaaatcatataattcagtgtaattatat 16927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 19909300 - 19909337
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgta 212  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  19909300 accgctaataatttgagaaaatcacataactcagtgta 19909337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 22515940 - 22515887
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||| |||||||||||||| |||||||||| | ||| ||||||||    
T  22515940 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22515887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 43492540 - 43492495
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||||||||| |||||| |||||||||| |||| |||||||    
T  43492540 atttgagaaaatcacgtaattcggtgtaattatgtgtgtcggtgtc 43492495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 43942332 - 43942381
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    ||||||||||||||||| |||||||||| |||||| |  |||||||||||    
T  43942332 taatgatttgagaaaataacataattcaatgtaatcacgtgtgacggtgt 43942381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 9630615 - 9630563
Alignment:
Q  248 gacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    ||||||||| |||||| |  |||||||||||| ||||||| ||||||||||||    
T  9630615 gacatgtgttcaacacgaggacacgcctaatccgaggagtgttcgtgcttcat 9630563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 10475033 - 10474997
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgt 211  Q
    ||||||||| | |||||||||||||||||||||||||    
T  10475033 accgctaataacttgagaaaatcacataattcagtgt 10474997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 22881668 - 22881616
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||||| |||||||||||||| |||||||||| | ||| ||||||||    
T  22881668 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22881616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 23738684 - 23738728
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||| |||||| ||||||||||||||||||| ||||| |||||    
T  23738684 gctaataatttgaaaaaatcacataattcagtgcaattaaatgtg 23738728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 28674803 - 28674847
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    |||| |||| |||||||||||| |||||||||||| |||||||||    
T  28674803 accgttaataatttgagaaaattacataattcagtataattatat 28674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 29163421 - 29163381
Alignment:
Q  191 gaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||||||||| | |||||||||||| ||||||||    
T  29163421 gaaaatcacataattcaatttaattatatgtgtcggtgtcg 29163381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 37055915 - 37055871
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||||    
T  37055915 gatactgctaataatttgagaaaattacataatttagtgtaatta 37055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 37598839 - 37598890
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||||| ||||||||| ||||||||||||||||| ||| ||||||||    
T  37598839 ctaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcg 37598890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 42359501 - 42359449
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||||| ||||||||| ||||||||||||||| | ||| ||||||||    
T  42359501 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 42359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 44296550 - 44296491
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||| |||| |||||||||||| |||||||| ||| |||| ||||||| ||||||||||||    
T  44296550 accggtaataatttgagaaaatgacataatttagt-taatcatatgtgtcggtgtcgtgtc 44296491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 49872843 - 49872887
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    |||||| |||||||||||  | |||||||||||||||||||||||    
T  49872843 gctaatcatttgagaaaactatataattcagtgtaattatatgtg 49872887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 178 - 302
Target Start/End: Complemental strand, 263425 - 263301
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| ||||||||||| |||||||||||||||||||||| ||| | ||||||||||  |||| ||||||||| |||| | | ||||| ||||||||||    
T  263425 gctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaa 263326  T
Q  278 tctgaggagttttcgtgcttcatct 302  Q
    || ||||||| | |||| |||||||    
T  263325 tccgaggagtgtccgtggttcatct 263301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 53180 - 53272
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacacc 264  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||| ||| ||||| ||||||  ||||||||| |||| |||||| |||||    
T  53180 gataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacacc 53272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 85)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 300
Target Start/End: Original strand, 10294107 - 10294235
Alignment:
Q  172 gataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacac 271  Q
    |||||||||||| |||||||| |||| |||| |||| |||||||||||||| |||||||||||   ||||||||||||||||||||| | || |  ||||    
T  10294107 gataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacac 10294206  T
Q  272 gcctaatctgaggagttttcgtgcttcat 300  Q
      |||||||||||||| |  |||||||||    
T  10294207 agctaatctgaggagtgtctgtgcttcat 10294235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 300
Target Start/End: Original strand, 9629386 - 9629511
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc-gtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgc 273  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||| |||||  |||||||||| |||||||||| ||||  | |||||     
T  9629386 accgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtc-gtgtcggacacaacatgtgtccgacactgagacacgt 9629484  T
Q  274 ctaatctgaggagttttcgtgcttcat 300  Q
    |||||| ||||||| | | ||||||||    
T  9629485 ctaatccgaggagtgtccatgcttcat 9629511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 16766703 - 16766825
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| ||||||||||||  |||||||||| ||| |||||| |||||   ||||||||||    
T  16766703 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaa 16766802  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || || || | | ||||||||||    
T  16766803 tccgaagaatgtccgtgcttcat 16766825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 9025547 - 9025490
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9025547 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 7265649 - 7265593
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  7265649 accgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 9195806 - 9195726
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtcca 259  Q
    ||||| |||||||||||| |||||||| |||||||||||||||| |||||||||||   |||| |||||||||||||||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacacgacatgtgtcca 9195726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 300
Target Start/End: Complemental strand, 10339172 - 10339056
Alignment:
Q  185 atttgagaaaatcacataattcagtg-taattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgag 283  Q
    |||||||||||||||||||||||||| |||||||||||| | ||| ||||||  ||||||||||||||  ||||| ||||    |||||||||||| |||    
T  10339172 atttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggag 10339073  T
Q  284 gagttttcgtgcttcat 300  Q
    |||| | ||||||||||    
T  10339072 gagtgtccgtgcttcat 10339056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 9107423 - 9107301
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| ||||||||| ||||||||||||||| | ||| ||||||||||||  |||||||||| || ||||||| |||||   |||| |||||    
T  9107423 gctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaa 9107324  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || |||||||   ||||||||||    
T  9107323 tccgaggagtgcccgtgcttcat 9107301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 8365571 - 8365450
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||| || |||||||||||| ||||||||| | ||| ||||||||||||  | |||||||||||| |||||| ||||    |||||||||||    
T  8365571 ctaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaat 8365472  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||||||| | ||||||||||    
T  8365471 ccgaggagtctccgtgcttcat 8365450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 31384927 - 31385047
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||| | ||||||||| | ||| |||||||||| |||||| |||||   |||||||||||    
T  31384927 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt-agtgttggacacgacacgtgtcctacaccgggacacgcctaat 31385025  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    |  |||||| | ||||||||||    
T  31385026 ccaaggagtgtccgtgcttcat 31385047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 9027181 - 9027241
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  9027181 accgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtc 9027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 19040355 - 19040411
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||    
T  19040355 accgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 16488631 - 16488564
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||  |||||||||||||| |||||    
T  16488631 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtc 16488564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 26562702 - 26562765
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||  ||||| |||||    
T  26562702 atttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcgaacacg 26562765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 7086801 - 7086859
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| |||||| ||||||    
T  7086801 gctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgtca 7086859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 9617436 - 9617510
Alignment:
Q  174 taccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||  |  |||||||||||    
T  9617436 taccggtaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgtcgcggtgtcggacacg 9617510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 34073401 - 34073343
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||| ||||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  34073401 cgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtc 34073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 7248365 - 7248486
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| || |||| |||||||||||||||| |||||||||||||  || ||||||||  ||| |||||| |||||||||| |||||   ||||| | |||    
T  7248365 ctaataatctgaggaaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaat 7248464  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
    | ||||||| | ||||||||||    
T  7248465 ccgaggagtgtccgtgcttcat 7248486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 7377982 - 7378038
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  7377982 accgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 7378038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 9522898 - 9522998
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||| | ||||||||||||||||||||||||| | ||| |||||| |||||  |||||||  ||||| |||||| ||||| | |||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaat 9522997  T
Q  279 c 279  Q
    |    
T  9522998 c 9522998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 21395363 - 21395292
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacac 247  Q
    ||||||||| |||||||||||| |||||||| |||||||||| | ||| ||||||||||||| ||||||||||    
T  21395363 accgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 30866200 - 30866153
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  30866200 accgctaataatttgagaaaatcacataattcaatgtaattatatgtg 30866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 9658882 - 9658936
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| || ||||||    
T  9658882 accgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 300
Target Start/End: Complemental strand, 5000682 - 5000557
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcc 274  Q
    ||||||||| ||| ||||||||||||| ||||||| ||||| ||| || | ||||| ||||  |||| |||||||||  | ||| ||||||  ||||| |    
T  5000682 accgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacatatccgacaccaggacacgtc 5000583  T
Q  275 taatctgaggagttttcgtgcttcat 300  Q
    ||||| || |||| ||||||||||||    
T  5000582 taatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 7996431 - 7996378
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  7996431 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 8022370 - 8022423
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||||||||||| ||||||||||||||||||||| | ||||||||    
T  8022370 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 10770726 - 10770669
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||| |||||||||||||    
T  10770726 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtca 10770669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 11591916 - 11591879
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11591916 atttgagaaaatcacataattcagtgtaattatatgtg 11591879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 13360418 - 13360373
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||||||||||||||||||||||||||||||||||||  |||||||    
T  13360418 atttgagaaaatcacataattcagtgtaattatatgtttcggtgtc 13360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 18367854 - 18367915
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||  |||| |||||||||    
T  18367854 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgaca 18367915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 19044471 - 19044528
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||| ||||||| |||||    
T  19044471 ctaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtcatgtca 19044528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 21924988 - 21924935
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||    
T  21924988 gctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcg 21924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 5732566 - 5732510
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||| |||||||||||||||||| || |||||||||||||||| ||||||||    
T  5732566 accgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcg 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 6665216 - 6665276
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| ||||||| |||||||||||||||| |||||||| |||| |||| |||||||    
T  6665216 accgctaataatttgagtaaatcacataattcagagtaattatttgtgtcggtatcgtgtc 6665276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 300
Target Start/End: Complemental strand, 17841642 - 17841531
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||| |||||||||||||| |||||||||| | ||||||||||||           |||||||||||||||| ||||  | ||||||||||    
T  17841642 gctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcg-----------gacacgacatgtgtccgacactgagacacgcctaa 17841554  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||||||| | ||||||||||    
T  17841553 tccgaggagtgtccgtgcttcat 17841531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 20371166 - 20371110
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| ||||||||||||||||||| ||| ||| |||||||||| ||||||||    
T  20371166 accgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtcg 20371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 32511722 - 32511666
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| |||  |||||||    
T  32511722 accgctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcg 32511666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 1532243 - 1532290
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  1532243 accgctaataatttgataaaattacataattcagtgtaattatatgtg 1532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 5970159 - 5970088
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    |||| |||||| ||||||||||||||||||||||||| |  ||  |||||||||||  ||||||||||||||    
T  5970159 taataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgaca 5970088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 7027262 - 7027301
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 11424750 - 11424679
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacac 263  Q
    ||||||| |||||||| | ||||||||||||  ||||| |||||  ||||| ||||||||||||||||||||    
T  11424750 aaaatcatataattcaatataattatatgtgttggtgttgtgtcggtgtcgaacacgacatgtgtccaacac 11424679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 13851739 - 13851786
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||||    
T  13851739 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 13851786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 300
Target Start/End: Complemental strand, 17327700 - 17327592
Alignment:
Q  186 tttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgagga 285  Q
    |||||||||||||||||||| ||||||| |||||||| | ||||||      |||||||||||||| |||||  ||||    |||||||||||| |||||    
T  17327700 tttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcg------tgtcggacacgacacgtgtctgacacagggacacgcctaatccgagga 17327607  T
Q  286 gttttcgtgcttcat 300  Q
    || | ||||||||||    
T  17327606 gtgtccgtgcttcat 17327592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 5462675 - 5462733
Alignment:
Q  161 gacatgacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    |||| ||||| || |||| |||| ||||||||||||||||||||||| |||||||||||    
T  5462675 gacacgacactgacaccgttaataatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 6898285 - 6898223
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    ||||||||||||   |||||||||||| |||||||||||||| || |||| ||||||||||||    
T  6898285 tgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcat 6898223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 7151419 - 7151473
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtg 233  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||  |||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcgtg 7151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 7977834 - 7977772
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||||||||| |||| ||||| ||| | ||||||||||||||| |||||| ||||||||||||    
T  7977834 tgtcggacacaacatatgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcat 7977772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 8931648 - 8931598
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||||||||| |||||||||||| |||||||||||| || |||||||||    
T  8931648 atttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtc 8931598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 31579281 - 31579239
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    |||| |||| |||||||||||||||||||||||||||||||||    
T  31579281 accgttaataatttgagaaaatcacataattcagtgtaattat 31579239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 7723303 - 7723246
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||||||||||| |||||||||  |||||||||||  ||||||||||||    
T  7723303 gctaataatttgagaaaatcatataattcagcataattatatgtatcggtgtcgtgtc 7723246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 33001342 - 33001289
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||| |||||||||||||| | |||||||||||||| ||||||||    
T  33001342 gctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcg 33001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 34290129 - 34290063
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacac 247  Q
    ||||| ||||| || |||||||||||||||||||||  |||||| ||||||||||||| |||| |||||    
T  34290129 ctaataatttgcgagaatcacataattcagtgtaat--tatgtgtcggtgtcgtgtcagtgtccgacac 34290063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 3209440 - 3209516
Alignment:
Q  224 cggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    ||||||||||||| ||||| |||||||| | |||| |||||   |||||||||||| ||||||| || |||||||||    
T  3209440 cggtgtcgtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcat 3209516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 9911566 - 9911522
Alignment:
Q  193 aaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaa 237  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||    
T  9911566 aaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcaa 9911522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 10889030 - 10888970
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||| |||||| |||||||||||||| ||||| ||||||||||   ||||||||||    
T  10889030 accgctaataatttgataaaatcacataatttagtgtgattatatgtgttagtgtcgtgtc 10888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 13364751 - 13364707
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||    
T  13364751 atttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 13364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 32320725 - 32320665
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||| |||| |||||| |||||||||||||||| ||| |||||||||  ||||||||||||    
T  32320725 accgttaataatttgataaaatcacataattcaatgtcattatatgtatcggtgtcgtgtc 32320665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 34595141 - 34595193
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||| ||||||||    
T  34595141 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 34595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 8714000 - 8714059
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    ||||||||||||||||||||||||| |  ||  |||||||||||  ||||||||||||||    
T  8714000 aaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgaca 8714059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 8805625 - 8805586
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattat 217  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  8805625 gctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 10842535 - 10842582
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||||| |||||| |||||||||||||| |||||||| |||||||    
T  10842535 accgctaataatttgaaaaaatcacataatttagtgtaatcatatgtg 10842582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 17341720 - 17341677
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattata 218  Q
    |||| |||| |||||| |||||||||||||||||||||||||||    
T  17341720 accgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 20576686 - 20576623
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtc 241  Q
    |||||| ||| ||||||||  |||||||||||||||||||| |||  ||||||||||| |||||    
T  20576686 gctaataattcgagaaaattgcataattcagtgtaattataagtgttggtgtcgtgtcgatgtc 20576623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 262
Target Start/End: Complemental strand, 32839697 - 32839612
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaatt---atatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaaca 262  Q
    |||| |||||||||||||||||||| |||| |||||   |||||||  |||||| ||| | ||||||||| |||||||||| ||||    
T  32839697 taataatttgagaaaatcacataatccagtataattatcatatgtgttggtgtcatgttagtgtcggacaagacatgtgtctaaca 32839612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 7569219 - 7569181
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattata 218  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattata 7569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 9024222 - 9024172
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||||||||| |||||||||| |||||| ||||||| | ||||||||||    
T  9024222 atttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgtgtc 9024172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 11784267 - 11784217
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||| ||||||||||||||||| | ||||||||||||||| || |||||||    
T  11784267 taataatttgagaaaatcacatgaatcagtgtaattatatatgtcggtgtc 11784217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 25038127 - 25038029
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgc 273  Q
    |||| |||| |||||||||||| |||||||| |||||||||| |  || |||| | ||||   |||| ||||||||| |||||| |||||| |||||||    
T  25038127 accgttaataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgacacgtgtccgacaccagaacacgc 25038029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 26178733 - 26178683
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    ||||| |||||| |||||||||||||| |||||||| ||||||| ||||||    
T  26178733 ctaataatttgataaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 28152153 - 28152215
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||||||||||||| |||||| |||||   ||| |||||||| ||||||| ||||||||||||    
T  28152153 tgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcat 28152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 32298611 - 32298549
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||| |||| ||||| |||||||||||| |||||||||||| ||| |||| ||| ||||||||    
T  32298611 tgtcagacatgacatatgtccaacaccagaacacgcctaatttgatgagtgttcatgcttcat 32298549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 12696330 - 12696387
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||| ||||| ||||||||||||||||||| | ||| | ||||||||||    
T  12696330 gctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtc 12696387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 13815456 - 13815505
Alignment:
Q  186 tttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||||||||||||||||||| || | ||||||||  ||||||||||||    
T  13815456 tttgagaaaatcacataattcaatgaagttatatgtctcggtgtcgtgtc 13815505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 14796236 - 14796187
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||| ||||||||||||||||||| | |||||||| || |||||||||||    
T  14796236 atttaagaaaatcacataattcagcgcaattatatatgtcggtgtcgtgt 14796187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 16388279 - 16388246
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattata 218  Q
    |||||| |||||||||||||||||||||||||||    
T  16388279 atttgaaaaaatcacataattcagtgtaattata 16388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 24832593 - 24832638
Alignment:
Q  177 cgctaatgatttgagaaaatcacataattcagtgtaattatatgtg 222  Q
    ||||||| |||||||||||||  |||||| ||||||||||||||||    
T  24832593 cgctaataatttgagaaaatcttataatttagtgtaattatatgtg 24832638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 28152105 - 28152157
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| ||||||||    
T  28152105 gctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcg 28152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 28715301 - 28715354
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||| ||||| ||||||||||||||||||| | ||| ||||||||    
T  28715301 gctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 28715354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 32299283 - 32299332
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgt 229  Q
    |||| ||||||||||||||||||||||| |||| ||||| ||| ||||||    
T  32299283 taataatttgagaaaatcacataattcaatgtagttatacgtgtcggtgt 32299332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 287
Target Start/End: Original strand, 33817952 - 33818072
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatat---gtgacggtgtcg----tgtca-atgtcggacacgacatgtgtccaacaccaa 266  Q
    ||||||||| ||| ||||||||  |||||||||||||||||||||   ||| ||||||||    ||||| |||||||||||| |  ||||| |||||  |    
T  33817952 accgctaataattggagaaaatttcataattcagtgtaattatatatcgtgtcggtgtcggacatgtcacatgtcggacacgtcgcgtgtctaacactga 33818051  T
Q  267 aacacgcctaatctgaggagt 287  Q
     ||| ||||||||||||||||    
T  33818052 gacatgcctaatctgaggagt 33818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 3398625 - 3398680
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||||| |||||| ||||||| ||||||||||||||||||| ||  |||||||||||    
T  3398625 gctaataatttga-aaaatcatataattcagtgtaattataagtatcggtgtcgtgt 3398680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 7801208 - 7801156
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| |||||| ||||||||||||||||| ||||||| | ||| ||||||||    
T  7801208 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 7801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 7938122 - 7938174
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    |||||| |||||| ||||||| |||||| |||||||||||| ||| |||||||    
T  7938122 gctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 12627629 - 12627577
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    ||||| || ||| ||||||||||||||||||||||| ||||||| || |||||    
T  12627629 ctaataatgtgaaaaaatcacataattcagtgtaataatatgtgtcgatgtcg 12627577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 19147845 - 19147905
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||| |||| |||| ||||||||| |||  |||| ||||||||||||| ||||||||||||    
T  19147845 accgttaataatttaagaaaatcatatagatcagagtaattatatgtgtcggtgtcgtgtc 19147905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 44581 - 44493
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacac 263  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| |||| |||||||  ||| |||||| ||| |||||| ||||    
T  44581 accgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacac 44493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 241600 - 241722
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaa 277  Q
    |||||| |||||  |||||||||||||| |||||||||||  ||| |||||||||||   |||||||||||||| |||||| |||||   ||||||||||    
T  241600 gctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaa 241699  T
Q  278 tctgaggagttttcgtgcttcat 300  Q
    || ||| ||| | ||||||||||    
T  241700 tccgagaagtgtccgtgcttcat 241722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 135365 - 135308
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  135365 gctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtc 135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 137793 - 137856
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    |||| ||||||||||| ||||||||||| | |||||||  |||||||||||| |||||||||||    
T  137793 atttaagaaaatcacacaattcagtgtagtcatatgtgttggtgtcgtgtcagtgtcggacacg 137856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 9799 - 9727
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgaca 251  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||   |||| |||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgaca 9727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 300
Target Start/End: Complemental strand, 3888 - 3780
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    ||||||||||||||||||||||||| | ||| | |||||||||   ||||||||||||||  ||||| ||| | | |||||||||||| ||||||| | |    
T  3888 aaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtcc 3789  T
Q  292 gtgcttcat 300  Q
     ||||||||    
T  3788 ttgcttcat 3780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 23531 - 23597
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtcc 258  Q
    ||||||||||||||||||||||||||| ||| | ||||||| ||  |||||||||||| ||||||||    
T  23531 aaaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgatatgtgtcc 23597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 23440 - 23483
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||    
T  23440 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtc 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 8853 - 8915
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||||||||||||| |||||| ||||| | |||||||||||||||||||| | ||||||||||    
T  8853 tgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcat 8915  T

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Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 99896 - 99962
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtc 241  Q
    |||| |||| |||| ||||||| |||||||||| ||||||||||||||  |||||||||||||||||    
T  99896 accgataataattttagaaaataacataattcaatgtaattatatgtgttggtgtcgtgtcaatgtc 99962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 90851 - 90890
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatat 219  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatat 90890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 6037 - 5970
Alignment:
Q  190 agaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtc 257  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||| ||  ||||| |||||||| |||||    
T  6037 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtc 5970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 265
Target Start/End: Original strand, 1038 - 1128
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacacca 265  Q
    ||||||||| |||||| ||||| |||||||||||||||| |||||||| | |||| |||||  ||| |||||| |||  |||| |||||||    
T  1038 accgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaacaaatgtctaacacca 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 6306 - 6372
Alignment:
Q  166 gacacggataccgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgt 232  Q
    |||||||| || |||||| |||||| |||||  ||||||||| |||||||||||||| |||||||||    
T  6306 gacacggacactgctaataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgtcgt 6372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 25819 - 25765
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    |||| ||| ||||||||||||||||| |||||||||||| ||| |||||||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 85019 - 84925
Alignment:
Q  185 atttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatc 279  Q
    |||| ||||||||| ||||||  |||||||||||| || ||||||| |||| |||||| |||| ||| |||||| ||| ||  ||||||||||||    
T  85019 atttaagaaaatcatataattatgtgtaattatatatgtcggtgtcatgtcgatgtcgaacacaacacgtgtccgacaacaggacacgcctaatc 84925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 20178 - 20235
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtc 235  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||| | ||||||||||    
T  20178 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtc 20235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 28853 - 28914
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtca 236  Q
    |||| |||| |||| |||||||| ||||||||| |||||||||||||| |||||| ||||||    
T  28853 accgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttgtgtca 28914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 92810 - 92851
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  92810 accgctaataatttgagaaaattacataattcagtgtaatta 92851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 21051 - 21119
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacg 248  Q
    |||| ||||||||||||||||||| || || |||||||||||| |||| |||||||  |||| ||||||    
T  21051 taataatttgagaaaatcacataagtcggtataattatatgtgtcggtatcgtgtcggtgtcagacacg 21119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 296
Target Start/End: Original strand, 2948 - 3052
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    |||||||||||||| |||||||||| | ||  | ||||||||||  | || ||||||||| |||| | |||||  ||||||||||||| ||||||| | |    
T  2948 aaaatcacataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtcc 3047  T
Q  292 gtgct 296  Q
    |||||    
T  3048 gtgct 3052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 300
Target Start/End: Original strand, 71745 - 71853
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttc 291  Q
    ||||||||| |||||||||||||||   ||| | ||||||||||  |||||||||| ||| |||||| |||||   ||||| |||||| ||||||| |      
T  71745 aaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcg 71844  T
Q  292 gtgcttcat 300  Q
    |||||||||    
T  71845 gtgcttcat 71853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 17903 - 17848
Alignment:
Q  208 gtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacac 263  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||| |||||| ||||    
T  17903 gtgtaattatatgtgacggtgtcgtatcggtgttggacacgacacgtgtccgacac 17848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 70286 - 70337
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||| |||||| ||||| ||||||||||||||||||||| ||| ||||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcg 70337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 70333 - 70394
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttca 299  Q
    |||||||||||||| |||||| ||||||  ||| |||||||| || |||| |||||||||||    
T  70333 tgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 63776 - 63831
Alignment:
Q  175 accgctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtc 230  Q
    ||||||||| |||||||||||| ||||||||||||| ||||| | ||| |||||||    
T  63776 accgctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtc 63831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 14582 - 14644
Alignment:
Q  238 tgtcggacacgacatgtgtccaacaccaaaacacgcctaatctgaggagttttcgtgcttcat 300  Q
    |||||||||||||| |||||| ||||| | ||||||||||||  |||||| | ||||||||||    
T  14582 tgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcat 14644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 14537 - 14574
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  14537 ctaataatttgaaaaaatcacataattcagtgtaatta 14574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 8685 - 8735
Alignment:
Q  191 gaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtc 241  Q
    |||||||||||| |||||| |||||||| ||| |||||||||||| |||||    
T  8685 gaaaatcacatagttcagtataattataagtgtcggtgtcgtgtctatgtc 8735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 51817 - 51855
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  51817 gctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 23790 - 23832
Alignment:
Q  192 aaaatcacataattcagtgtaattatatgtgacggtgtcgtgt 234  Q
    ||||||||||||||||||||||||| | ||| |||||||||||    
T  23790 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

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Target: scaffold0652 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 515 - 462
Alignment:
Q  178 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcg 231  Q
    |||||| |||||| ||||||||| ||||||||||||||| | ||| ||||||||    
T  515 gctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 462  T

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Target: scaffold0450 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 8687 - 8566
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaattatatgtgacggtgtcgtgtcaatgtcggacacgacatgtgtccaacaccaaaacacgcctaat 278  Q
    ||||| |||||| || |||||||||||| || |||||| |  || ||||||||||||  | |||||||||| | |||||| ||||    |||||||||||    
T  8687 ctaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaat 8588  T
Q  279 ctgaggagttttcgtgcttcat 300  Q
      ||||||| | ||||||||||    
T  8587 tcgaggagtgtccgtgcttcat 8566  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 13407 - 13444
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  13407 ctaataatttgagaaaatcacataattcagtgcaatta 13444  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 21920 - 21883
Alignment:
Q  179 ctaatgatttgagaaaatcacataattcagtgtaatta 216  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  21920 ctaataatttgagaaaatcacataattcagtgcaatta 21883  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 46690 - 46726
Alignment:
Q  180 taatgatttgagaaaatcacataattcagtgtaatta 216  Q
    |||| |||||| |||||||||||||||||||||||||    
T  46690 taataatttgaaaaaatcacataattcagtgtaatta 46726  T

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