View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9893_low_46 (Length: 253)

Name: NF9893_low_46
Description: NF9893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9893_low_46
NF9893_low_46
[»] chr4 (52 HSPs)
chr4 (127-244)||(27633961-27634079)
chr4 (13-130)||(27634146-27634263)
chr4 (5-127)||(6778511-6778633)
chr4 (5-130)||(40717271-40717396)
chr4 (5-130)||(50543395-50543520)
chr4 (5-130)||(28245591-28245716)
chr4 (5-130)||(35796807-35796932)
chr4 (15-130)||(52559708-52559823)
chr4 (32-130)||(35788816-35788913)
chr4 (5-98)||(5398572-5398665)
chr4 (5-130)||(6218333-6218458)
chr4 (5-130)||(22231138-22231263)
chr4 (32-128)||(5398278-5398373)
chr4 (31-130)||(21750107-21750206)
chr4 (34-130)||(17111692-17111787)
chr4 (39-101)||(13555341-13555403)
chr4 (1-129)||(11036577-11036705)
chr4 (32-116)||(24974263-24974347)
chr4 (76-130)||(39902628-39902682)
chr4 (5-78)||(4645771-4645844)
chr4 (38-98)||(7926484-7926545)
chr4 (70-130)||(2516160-2516220)
chr4 (66-130)||(21498750-21498814)
chr4 (34-129)||(32292597-32292693)
chr4 (66-130)||(53828354-53828418)
chr4 (10-81)||(35645279-35645350)
chr4 (10-81)||(35645568-35645639)
chr4 (5-74)||(35819014-35819083)
chr4 (32-91)||(1215911-1215971)
chr4 (78-130)||(21684965-21685017)
chr4 (78-130)||(27634581-27634633)
chr4 (78-130)||(35788626-35788678)
chr4 (48-88)||(36686016-36686056)
chr4 (68-103)||(5846336-5846371)
chr4 (66-97)||(14783051-14783082)
chr4 (32-98)||(43743140-43743207)
chr4 (76-130)||(31254472-31254526)
chr4 (33-83)||(33107791-33107841)
chr4 (47-98)||(12005566-12005619)
chr4 (78-127)||(14783255-14783304)
chr4 (32-73)||(21646389-21646430)
chr4 (77-130)||(22231373-22231426)
chr4 (10-83)||(25324146-25324219)
chr4 (66-99)||(35609586-35609619)
chr4 (77-130)||(35797042-35797095)
chr4 (62-95)||(36685974-36686007)
chr4 (77-130)||(45784943-45784996)
chr4 (78-127)||(46660977-46661026)
chr4 (74-130)||(53698989-53699046)
chr4 (66-103)||(53814787-53814824)
chr4 (78-130)||(22845512-22845564)
chr4 (78-130)||(35645830-35645882)
[»] chr2 (41 HSPs)
chr2 (13-130)||(37812333-37812450)
chr2 (1-130)||(2029894-2030023)
chr2 (5-130)||(16419396-16419521)
chr2 (5-130)||(5711504-5711629)
chr2 (5-130)||(14466240-14466365)
chr2 (5-129)||(33606120-33606244)
chr2 (32-130)||(15124613-15124711)
chr2 (5-127)||(17525167-17525289)
chr2 (12-130)||(16533448-16533566)
chr2 (5-102)||(40379302-40379399)
chr2 (38-130)||(36351991-36352083)
chr2 (13-130)||(40149068-40149183)
chr2 (32-129)||(24396019-24396118)
chr2 (14-102)||(44404019-44404107)
chr2 (78-130)||(4662198-4662250)
chr2 (33-102)||(93215-93281)
chr2 (78-130)||(2029736-2029788)
chr2 (5-100)||(21383384-21383480)
chr2 (72-130)||(5711740-5711798)
chr2 (77-130)||(37812563-37812616)
chr2 (66-117)||(12343687-12343738)
chr2 (32-95)||(34515595-34515658)
chr2 (32-102)||(18607102-18607172)
chr2 (10-83)||(42895382-42895455)
chr2 (78-130)||(14466475-14466527)
chr2 (78-130)||(17525403-17525455)
chr2 (78-130)||(37840304-37840356)
chr2 (32-95)||(41069263-41069327)
chr2 (32-83)||(13250134-13250185)
chr2 (62-129)||(25082603-25082670)
chr2 (32-126)||(32356539-32356631)
chr2 (76-130)||(2324205-2324259)
chr2 (72-130)||(27036477-27036535)
chr2 (66-103)||(17854784-17854821)
chr2 (34-83)||(36063304-36063353)
chr2 (76-105)||(38021001-38021030)
chr2 (66-130)||(2324429-2324493)
chr2 (66-117)||(10523207-10523259)
chr2 (78-130)||(12343815-12343867)
chr2 (78-130)||(17719367-17719419)
chr2 (32-88)||(19110399-19110455)
[»] chr7 (57 HSPs)
chr7 (5-130)||(21861423-21861548)
chr7 (10-130)||(29469739-29469859)
chr7 (5-130)||(1596722-1596847)
chr7 (5-130)||(3519790-3519915)
chr7 (32-130)||(6001500-6001598)
chr7 (5-117)||(25620265-25620377)
chr7 (14-117)||(33834329-33834432)
chr7 (5-126)||(33996148-33996269)
chr7 (32-107)||(40746121-40746195)
chr7 (32-130)||(31892308-31892406)
chr7 (5-130)||(36277056-36277181)
chr7 (32-129)||(14540807-14540904)
chr7 (32-100)||(22574757-22574825)
chr7 (31-130)||(2404239-2404337)
chr7 (32-94)||(2315127-2315189)
chr7 (34-100)||(21821962-21822028)
chr7 (38-130)||(48243126-48243216)
chr7 (39-101)||(9688964-9689026)
chr7 (10-103)||(18826345-18826438)
chr7 (14-94)||(31485525-31485605)
chr7 (5-84)||(48661430-48661510)
chr7 (31-130)||(35308211-35308310)
chr7 (10-129)||(36993140-36993258)
chr7 (76-130)||(26239981-26240035)
chr7 (76-130)||(43688224-43688278)
chr7 (31-84)||(48661061-48661115)
chr7 (31-84)||(48661184-48661238)
chr7 (31-84)||(48661307-48661361)
chr7 (66-130)||(2544280-2544344)
chr7 (32-75)||(3519924-3519967)
chr7 (33-100)||(4507089-4507154)
chr7 (32-127)||(28080821-28080919)
chr7 (1-88)||(35308348-35308435)
chr7 (54-108)||(27939117-27939171)
chr7 (5-83)||(30727231-30727309)
chr7 (31-84)||(48660938-48660992)
chr7 (77-130)||(18826553-18826606)
chr7 (78-131)||(21861261-21861314)
chr7 (32-96)||(4886485-4886548)
chr7 (78-130)||(29469572-29469624)
chr7 (66-130)||(34027348-34027412)
chr7 (32-88)||(40898822-40898878)
chr7 (78-130)||(46452599-46452651)
chr7 (79-130)||(44874411-44874462)
chr7 (32-86)||(5871685-5871739)
chr7 (153-199)||(22590816-22590862)
chr7 (77-130)||(4267820-4267873)
chr7 (66-103)||(20305521-20305558)
chr7 (66-95)||(34027582-34027611)
chr7 (82-131)||(36993367-36993416)
chr7 (78-131)||(41190981-41191034)
chr7 (78-130)||(1596561-1596613)
chr7 (32-95)||(1936212-1936276)
chr7 (70-130)||(4268013-4268073)
chr7 (78-130)||(21055018-21055070)
chr7 (35-83)||(22339480-22339528)
chr7 (78-126)||(48661624-48661672)
[»] chr1 (55 HSPs)
chr1 (10-130)||(25713292-25713412)
chr1 (32-130)||(4112836-4112934)
chr1 (1-130)||(2859457-2859586)
chr1 (15-132)||(17412471-17412588)
chr1 (5-130)||(35772158-35772283)
chr1 (10-130)||(27413481-27413601)
chr1 (32-129)||(4112606-4112703)
chr1 (10-130)||(26177042-26177162)
chr1 (5-131)||(52961476-52961602)
chr1 (5-128)||(33156863-33156986)
chr1 (32-130)||(8870754-8870852)
chr1 (5-130)||(16163062-16163186)
chr1 (35-130)||(25145550-25145645)
chr1 (32-131)||(34264550-34264649)
chr1 (32-131)||(38733303-38733402)
chr1 (32-130)||(39348184-39348280)
chr1 (32-130)||(38668281-38668379)
chr1 (32-102)||(51459798-51459868)
chr1 (32-98)||(7307877-7307943)
chr1 (32-130)||(35892212-35892310)
chr1 (32-102)||(51460175-51460245)
chr1 (32-95)||(12325396-12325460)
chr1 (32-95)||(12376537-12376601)
chr1 (32-102)||(51459923-51459992)
chr1 (32-85)||(369788-369841)
chr1 (32-96)||(7653397-7653461)
chr1 (78-130)||(20208591-20208643)
chr1 (78-130)||(35303505-35303557)
chr1 (13-75)||(4098288-4098350)
chr1 (70-131)||(51589185-51589246)
chr1 (5-80)||(17208683-17208758)
chr1 (5-100)||(26173316-26173411)
chr1 (67-131)||(3169956-3170021)
chr1 (32-129)||(12489032-12489128)
chr1 (66-131)||(51589995-51590060)
chr1 (78-130)||(17452893-17452945)
chr1 (82-130)||(17468315-17468363)
chr1 (78-130)||(43409774-43409826)
chr1 (32-98)||(9146651-9146717)
chr1 (32-83)||(26229722-26229773)
chr1 (15-126)||(39100485-39100596)
chr1 (12-97)||(11524898-11524983)
chr1 (12-97)||(11525113-11525198)
chr1 (32-94)||(40189086-40189148)
chr1 (77-130)||(3169732-3169785)
chr1 (78-131)||(26176875-26176928)
chr1 (78-127)||(26603395-26603444)
chr1 (78-131)||(51588959-51589012)
chr1 (78-130)||(4113071-4113123)
chr1 (36-96)||(9499405-9499465)
chr1 (78-130)||(11924888-11924940)
chr1 (78-130)||(26173521-26173573)
chr1 (78-130)||(26865423-26865475)
chr1 (78-130)||(41035892-41035944)
chr1 (5-129)||(51460273-51460397)
[»] chr6 (41 HSPs)
chr6 (5-128)||(13353330-13353453)
chr6 (5-128)||(33796455-33796578)
chr6 (32-130)||(17147725-17147823)
chr6 (5-130)||(4868642-4868767)
chr6 (5-130)||(33494668-33494793)
chr6 (1-130)||(3680137-3680265)
chr6 (5-130)||(12330009-12330134)
chr6 (32-130)||(30256733-30256832)
chr6 (32-130)||(6400685-6400783)
chr6 (32-127)||(6542776-6542871)
chr6 (15-107)||(9705160-9705250)
chr6 (5-117)||(30505631-30505743)
chr6 (32-96)||(34345553-34345617)
chr6 (31-130)||(6054324-6054422)
chr6 (32-130)||(7638655-7638753)
chr6 (32-130)||(31961099-31961197)
chr6 (80-129)||(25065160-25065209)
chr6 (66-130)||(2736232-2736296)
chr6 (78-130)||(12330355-12330407)
chr6 (78-130)||(24554084-24554136)
chr6 (81-130)||(12199870-12199919)
chr6 (78-130)||(6400911-6400963)
chr6 (78-130)||(13353168-13353220)
chr6 (66-130)||(15081973-15082037)
chr6 (66-130)||(27772901-27772965)
chr6 (78-130)||(33796293-33796345)
chr6 (66-97)||(8026577-8026608)
chr6 (12-127)||(32290864-32290979)
chr6 (45-78)||(9496461-9496494)
chr6 (73-130)||(11085775-11085832)
chr6 (85-130)||(12330244-12330289)
chr6 (67-96)||(21690912-21690941)
chr6 (32-81)||(33631684-33631733)
chr6 (40-97)||(34342978-34343035)
chr6 (78-130)||(2753225-2753277)
chr6 (78-130)||(4868878-4868930)
chr6 (78-130)||(6543008-6543060)
chr6 (78-130)||(8567023-8567075)
chr6 (78-130)||(9704987-9705039)
chr6 (66-130)||(27656414-27656477)
chr6 (78-130)||(33494506-33494558)
[»] scaffold0729 (1 HSPs)
scaffold0729 (5-127)||(2623-2745)
[»] chr5 (48 HSPs)
chr5 (32-130)||(8081179-8081277)
chr5 (5-130)||(24269935-24270060)
chr5 (5-130)||(24346566-24346691)
chr5 (13-130)||(30770114-30770231)
chr5 (5-130)||(41666822-41666947)
chr5 (5-130)||(95331-95456)
chr5 (5-130)||(33337303-33337428)
chr5 (12-130)||(18333530-18333647)
chr5 (32-130)||(20510707-20510805)
chr5 (32-130)||(24528696-24528794)
chr5 (5-130)||(15480451-15480576)
chr5 (34-130)||(9368753-9368849)
chr5 (16-127)||(26137177-26137288)
chr5 (32-131)||(38731667-38731765)
chr5 (5-127)||(43117776-43117898)
chr5 (32-130)||(15590094-15590192)
chr5 (5-100)||(17015971-17016065)
chr5 (31-130)||(17352500-17352598)
chr5 (32-130)||(6919259-6919357)
chr5 (32-130)||(11895980-11896078)
chr5 (5-101)||(11896249-11896346)
chr5 (5-130)||(17150298-17150423)
chr5 (5-98)||(25258163-25258256)
chr5 (5-98)||(25321953-25322046)
chr5 (32-102)||(11896128-11896198)
chr5 (32-130)||(18885383-18885480)
chr5 (5-129)||(13700655-13700780)
chr5 (32-84)||(24531755-24531807)
chr5 (54-117)||(26245926-26245989)
chr5 (32-130)||(32908783-32908880)
chr5 (32-102)||(11896419-11896492)
chr5 (78-130)||(2063798-2063850)
chr5 (31-83)||(6415827-6415879)
chr5 (66-130)||(6637792-6637856)
chr5 (66-130)||(13296847-13296911)
chr5 (66-130)||(19522276-19522340)
chr5 (80-130)||(13701133-13701183)
chr5 (33-83)||(42490530-42490580)
chr5 (66-131)||(27133057-27133122)
chr5 (34-102)||(11896542-11896610)
chr5 (66-130)||(29909552-29909616)
chr5 (78-130)||(41667058-41667110)
chr5 (78-117)||(38976876-38976915)
chr5 (77-131)||(3859372-3859426)
chr5 (66-128)||(8098506-8098568)
chr5 (77-130)||(19705869-19705922)
chr5 (78-130)||(24346802-24346854)
chr5 (78-130)||(37656582-37656634)
[»] chr3 (45 HSPs)
chr3 (5-130)||(20327679-20327804)
chr3 (5-130)||(4155453-4155578)
chr3 (32-116)||(34992762-34992846)
chr3 (15-130)||(31317370-31317485)
chr3 (32-130)||(16239748-16239846)
chr3 (32-130)||(35038259-35038357)
chr3 (32-129)||(19954284-19954380)
chr3 (5-130)||(20303129-20303254)
chr3 (13-127)||(39683336-39683450)
chr3 (12-127)||(52724054-52724169)
chr3 (32-130)||(29215654-29215751)
chr3 (32-98)||(13574781-13574848)
chr3 (66-130)||(9273150-9273214)
chr3 (32-100)||(22729649-22729717)
chr3 (78-131)||(38791514-38791567)
chr3 (32-77)||(39269230-39269275)
chr3 (38-88)||(51226918-51226968)
chr3 (32-130)||(54368643-54368741)
chr3 (78-131)||(2123774-2123827)
chr3 (77-130)||(16239557-16239610)
chr3 (78-130)||(16927014-16927066)
chr3 (66-130)||(17638363-17638427)
chr3 (78-130)||(34992517-34992569)
chr3 (66-97)||(1722940-1722971)
chr3 (78-117)||(20303013-20303052)
chr3 (31-117)||(26753364-26753450)
chr3 (76-130)||(39620291-39620345)
chr3 (78-119)||(7697473-7697514)
chr3 (68-97)||(8018925-8018954)
chr3 (32-73)||(21808834-21808875)
chr3 (66-103)||(23691284-23691321)
chr3 (66-103)||(23708084-23708121)
chr3 (66-103)||(23726540-23726577)
chr3 (66-103)||(23744996-23745033)
chr3 (66-103)||(24063521-24063558)
chr3 (77-130)||(39269297-39269350)
chr3 (62-98)||(45828196-45828233)
chr3 (32-68)||(20303277-20303313)
chr3 (79-107)||(20327564-20327592)
chr3 (78-130)||(22729067-22729119)
chr3 (1-100)||(22775493-22775593)
chr3 (69-97)||(28087102-28087130)
chr3 (78-130)||(35038493-35038545)
chr3 (81-129)||(52994748-52994796)
chr3 (78-130)||(54567859-54567911)
[»] scaffold0519 (2 HSPs)
scaffold0519 (32-130)||(2072-2170)
scaffold0519 (78-130)||(1883-1935)
[»] chr8 (53 HSPs)
chr8 (32-130)||(11232259-11232357)
chr8 (5-130)||(18004161-18004284)
chr8 (5-130)||(39052602-39052727)
chr8 (5-102)||(39052787-39052884)
chr8 (1-130)||(35682846-35682975)
chr8 (5-101)||(3157103-3157199)
chr8 (32-130)||(8084283-8084381)
chr8 (32-130)||(39960113-39960210)
chr8 (5-100)||(20301390-20301485)
chr8 (5-100)||(21088022-21088117)
chr8 (32-130)||(12688228-12688326)
chr8 (32-126)||(20094629-20094723)
chr8 (32-102)||(3157417-3157487)
chr8 (10-130)||(5932014-5932134)
chr8 (5-130)||(422282-422408)
chr8 (32-130)||(28213168-28213266)
chr8 (5-91)||(41790787-41790873)
chr8 (32-129)||(5675800-5675897)
chr8 (14-97)||(31079660-31079744)
chr8 (10-83)||(37867945-37868018)
chr8 (10-83)||(42049563-42049636)
chr8 (32-100)||(5589835-5589903)
chr8 (34-100)||(10615034-10615101)
chr8 (32-83)||(37868185-37868236)
chr8 (32-94)||(7669575-7669636)
chr8 (5-102)||(31197743-31197838)
chr8 (78-130)||(11232494-11232546)
chr8 (78-130)||(12317013-12317065)
chr8 (66-130)||(17477020-17477084)
chr8 (66-130)||(19256651-19256715)
chr8 (75-130)||(15042735-15042790)
chr8 (66-129)||(39743484-39743547)
chr8 (76-130)||(28069422-28069476)
chr8 (43-83)||(8849349-8849389)
chr8 (78-130)||(10449967-10450019)
chr8 (5-96)||(10615523-10615615)
chr8 (66-130)||(19472315-19472379)
chr8 (66-130)||(19543240-19543304)
chr8 (66-130)||(19589392-19589456)
chr8 (78-130)||(24532486-24532538)
chr8 (78-130)||(25325613-25325665)
chr8 (76-131)||(34653116-34653171)
chr8 (66-97)||(34842867-34842898)
chr8 (66-97)||(34843039-34843070)
chr8 (71-130)||(34843077-34843136)
chr8 (10-100)||(37868443-37868533)
chr8 (1-83)||(8716240-8716322)
chr8 (85-130)||(5932249-5932294)
chr8 (77-130)||(12547065-12547118)
chr8 (32-69)||(15797134-15797171)
chr8 (78-130)||(5590433-5590485)
chr8 (13-100)||(30201619-30201707)
chr8 (78-130)||(39052994-39053046)
[»] scaffold0048 (2 HSPs)
scaffold0048 (32-117)||(81997-82082)
scaffold0048 (78-130)||(81809-81861)
[»] scaffold0366 (2 HSPs)
scaffold0366 (14-102)||(14543-14631)
scaffold0366 (32-102)||(10895-10965)
[»] scaffold0459 (1 HSPs)
scaffold0459 (32-102)||(13254-13324)
[»] scaffold0692 (2 HSPs)
scaffold0692 (5-81)||(5633-5709)
scaffold0692 (79-130)||(5819-5870)
[»] scaffold0047 (1 HSPs)
scaffold0047 (32-102)||(12803-12872)
[»] scaffold0129 (1 HSPs)
scaffold0129 (5-130)||(14432-14557)
[»] scaffold0092 (1 HSPs)
scaffold0092 (31-131)||(5810-5910)
[»] scaffold0083 (1 HSPs)
scaffold0083 (14-83)||(51411-51480)
[»] scaffold0027 (1 HSPs)
scaffold0027 (57-102)||(121499-121544)
[»] scaffold0041 (1 HSPs)
scaffold0041 (32-88)||(67406-67462)
[»] scaffold0005 (3 HSPs)
scaffold0005 (66-97)||(56648-56679)
scaffold0005 (78-127)||(56426-56475)
scaffold0005 (82-126)||(288726-288770)
[»] scaffold0024 (1 HSPs)
scaffold0024 (76-130)||(89618-89672)


Alignment Details
Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 27634079 - 27633961
Alignment:
Q  127 agtgattaggaattgtagggtt-ggttgaaatgattagtaattacaatgaccaaaactcaagtgacccatatttcaagagaccaattacatatttaagcc 225  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||    
T  27634079 agtgattaggaattgtagagtttggttgaaatgattagtaattacaatgaccaaaactcaagtgacccatatttcgagggaccaattacatatttaaacc 27633980  T
Q  226 aatataaccctatgcttct 244  Q
    |||||||||||||| ||||    
T  27633979 aatataaccctatgtttct 27633961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 27634263 - 27634146
Alignment:
Q  13 gctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctg 112  Q
    |||||||| || |||| ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||  |||    
T  27634263 gctatcggaccacccactgtttatgtccacgaaccaagcccaatagtgctggtcgtgagggggggtgttaagagtcccacatcggataggacatggcctg 27634164  T
Q  113 acaatatttttataagtg 130  Q
    ||||| | ||||||||||    
T  27634163 acaatgtgtttataagtg 27634146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 6778633 - 6778511
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| |||    |||||||| ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  6778633 aggtttccgctatcgggccaccccccatttatgtctacgaaccaaacctaatagtgctgatcgtgagggggtgtgttaagagtcccacatcggataggac 6778534  T
Q  105 atgatctgacaatatttttataa 127  Q
    ||| ||||||||||| |||||||    
T  6778533 atggtctgacaatatatttataa 6778511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 40717396 - 40717271
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||||||||| || ||||   ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| || || ||    
T  40717396 aggtttccgctatcggaccacccaccatttatgtccacaaaccaagcctaatagtgctggtcgtgagggggtgtgttaagagtcccacatcagacagaac 40717297  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||| |||||||| | ||||||||||    
T  40717296 atgacctgacaatgtgtttataagtg 40717271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 50543520 - 50543395
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||| ||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||      
T  50543520 aggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgttaagagccccacatcggataggtg 50543421  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    ||| ||||||||| | | ||||||||    
T  50543420 atggtctgacaatgtgtgtataagtg 50543395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 28245716 - 28245591
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||| |||||||||||||      
T  28245716 aggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgatggggtgtgttaagagtctcacatcggataggtg 28245617  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  28245616 atggcctgacaatgtgtttataagtg 28245591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 35796932 - 35796807
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  35796932 aggtttccgctatcgggccacccaccatttatctccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagttccacatcggacaggac 35796833  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||   ||||||| | ||||||||||    
T  35796832 atggcatgacaatgtgtttataagtg 35796807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 52559708 - 52559823
Alignment:
Q  15 tatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgac 114  Q
    ||||||||| ||||   ||||||||||||||||||||| ||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||  ||||    
T  52559708 tatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggttgtgagggggtgtgttaaaaatcccacatcggataggacatgacttgac 52559807  T
Q  115 aatatttttataagtg 130  Q
    ||| | ||||||||||    
T  52559808 aatgtgtttataagtg 52559823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 35788816 - 35788913
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||  |||||||| | ||||||||||    
T  35788816 tttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg-gtgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtg 35788913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 5398665 - 5398572
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcgga 98  Q
    |||| ||||||||||| || ||||   ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  5398665 aggtttccgctatcggaccacccaccatttatgtccacgaaccaagccaaatagtgctggtcgtgagggggtgtgttaagagtcccacatcgga 5398572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 6218333 - 6218458
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||||||| || | |||||  ||||||| || |||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |||||||     
T  6218333 aggtttccgctatcaggtcacccatcatttatgtacaagaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtctcacatcagataggag 6218432  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||| || ||||| | ||||||||||    
T  6218433 atgacctaacaatgtgtttataagtg 6218458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 22231263 - 22231138
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| || |   ||||||||||||||||||||| ||||||| |  || ||||||| |||||||||||||| |||||||||||||     
T  22231263 aggtttccgctatcgggccacctaccatttatgtccacgaaccaagcccaatagtgctcatcatgaggggatgtgttaagagtcctacatcggataggat 22231164  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  22231163 atggcctgacaatgtgtttataagtg 22231138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 5398373 - 5398278
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataag 128  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||| ||| | | |||| ||||||||| | ||||||||    
T  5398373 tttatgtccacgaaccaagcccaataatgttggtcgtga-ggggtgtgttaagagtcccacattggacaagtcatggtctgacaatgtgtttataag 5398278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 21750206 - 21750107
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||  | |||| |  |||||||||||||||||||||| |||| ||||||||||| || ||||| ||||||||| ||||||||||    
T  21750206 gtttatgtccacgaaccaaatccaataatactggtcgtgagggggtgtgttaaaagtctcacatcggataagagatgatatgacaatatctttataagtg 21750107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 17111692 - 17111787
Alignment:
Q  34 tatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||| |||||||||||||||||||||||||||| || | ||||||||||||||||||| ||||||  |||  |||||||| | ||||||||||    
T  17111692 tatgtccaagaaccaagcctaatagtgttggtcgtga-ggagcgtgttaagagtcccacatcagataggtgatggcctgacaatgtgtttataagtg 17111787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 13555403 - 13555341
Alignment:
Q  39 ccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatag 101  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  13555403 ccacgaaccaagcccaatagtgttgatcgtgagggggggtgttaagagttccacatcggatag 13555341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 11036705 - 11036577
Alignment:
Q  1 tattaggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||||||| ||||||||| |||| ||||   || ||||||| |||||||||  |||| ||  |||||||||||| |||||||||||||||| ||| ||||    
T  11036705 tattaggtttccgctatcaggccacccaccattaatgtccatgaaccaagctcaatattgcaggtcgtgaggggttgtgttaagagtcccaaatcagata 11036606  T
Q  101 ggacatgatctgacaatatttttataagt 129  Q
    ||  ||||  ||||||| | |||||||||    
T  11036605 ggtgatgacatgacaatgtgtttataagt 11036577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 24974263 - 24974347
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaa 116  Q
    |||||||| |||||||||||| ||||| | | |||||||  | |||||||||||||||||||||||||| || ||| ||||||||    
T  24974263 tttatgtctacgaaccaagcccaatagcgctagtcgtgacagagtgtgttaagagtcccacatcggatatgagatggtctgacaa 24974347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 39902682 - 39902628
Alignment:
Q  76 tgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||||||||  |||||||| | ||||||||||    
T  39902682 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 39902628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 4645771 - 4645844
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgt 78  Q
    |||| |||||||||||||| ||||    ||||||||||||| |||||| || ||||||||||||||||||||||    
T  4645771 aggtttccgctatcgggccacccaccaattatgtccacgaatcaagcccaaaagtgttggtcgtgagggggtgt 4645844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 7926484 - 7926545
Alignment:
Q  38 tccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcgga 98  Q
    ||||||||||||||| |||| || | |||||||||||||||||| |||||||||||||||||    
T  7926484 tccacgaaccaagcccaataatggtagtcgtgagggggtgtgttaaagagtcccacatcgga 7926545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 2516160 - 2516220
Alignment:
Q  70 agggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||| |||| ||| | |||| |||||||||| ||||||||||    
T  2516160 agggggtgtgttaagagtcccacttcggttagaagatgacctgacaatatgtttataagtg 2516220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 21498750 - 21498814
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  21498750 cgtgagggggtgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 21498814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 32292693 - 32292597
Alignment:
Q  34 tatgtccacgaaccaagcctaatagtgttggtcgtgaggg-ggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    ||||||||||||||||||| |||||||||| |||||||||   |||||| |||||   |||||| ||| |  ||||||||||||||| |||||||||    
T  32292693 tatgtccacgaaccaagcccaatagtgttgatcgtgagggttatgtgtttagagttttacatcgaataagcgatgatctgacaatatatttataagt 32292597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 53828418 - 53828354
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  53828418 cgtgagggggtgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 53828354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 35645350 - 35645279
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt 81  Q
    |||||||||||||| |||    |||||||||||||||||| || ||| ||| ||||||||||||||||||||    
T  35645350 tccgctatcgggccacccgccatttatgtccacgaaccaaacccaattgtgctggtcgtgagggggtgtgtt 35645279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 35645639 - 35645568
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt 81  Q
    |||||||||||||| |||    |||||||||||||||||| || ||| ||| ||||||||||||||||||||    
T  35645639 tccgctatcgggccacccgccatttatgtccacgaaccaaacccaattgtgctggtcgtgagggggtgtgtt 35645568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 35819083 - 35819014
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggg 74  Q
    |||| |||||||||||| | ||||   ||||||||||||||||||||| ||||||| |||| ||||||||    
T  35819083 aggtttccgctatcgggtcacccaccatttatgtccacgaaccaagcccaatagtgctggttgtgagggg 35819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 1215911 - 1215971
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtccca 91  Q
    ||||||||||||||||||| | ||||||||||||| | |||| ||||||| ||||||||||    
T  1215911 tttatgtccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 1215971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 21684965 - 21685017
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||| ||||||||||||||||||  |||||||| | ||||||||||    
T  21684965 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtg 21685017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 27634633 - 27634581
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||||||  |||||||| | ||||| ||||    
T  27634633 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttatgagtg 27634581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 35788626 - 35788678
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||| |||||||||||  |||||||| | ||||||||||    
T  35788626 tgttaagagtcccacatcagataggacatggcctgacaatgtgtttataagtg 35788678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 36686056 - 36686016
Alignment:
Q  48 aagcctaatagtgttggtcgtgagggggtgtgttaagagtc 88  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  36686056 aagcctaatagtgctggtcgtgagggtgtgtgttaagagtc 36686016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 5846336 - 5846371
Alignment:
Q  68 tgagggggtgtgttaagagtcccacatcggatagga 103  Q
    |||||||||||||||||||||||||||||| |||||    
T  5846336 tgagggggtgtgttaagagtcccacatcggttagga 5846371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 97
Target Start/End: Complemental strand, 14783082 - 14783051
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcgg 97  Q
    ||||||||||||||||||||||||||||||||    
T  14783082 cgtgagggggtgtgttaagagtcccacatcgg 14783051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 43743140 - 43743207
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcgga 98  Q
    |||||||||||||||||| || |||| || |||| ||||||| ||||||| ||||||| |||||||||    
T  43743140 tttatgtccacgaaccaaacccaataatgctggttgtgagggagtgtgttaaagagtctcacatcgga 43743207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 31254526 - 31254472
Alignment:
Q  76 tgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||||  |||  |||||||| | ||||||||||    
T  31254526 tgtgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 31254472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 33107791 - 33107841
Alignment:
Q  33 ttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||||||||||||| | ||| || |||||||||||| ||||||||||    
T  33107791 ttatgtccacgaaccaagtccaatggtcttggtcgtgaggaggtgtgttaa 33107841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 12005619 - 12005566
Alignment:
Q  47 caagcctaatagtgttggtcgtgagggg-gtgtgtt-aagagtcccacatcgga 98  Q
    |||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  12005619 caagcccaatagtgctggtcgtgaggggtgtgtgttaaagagtcccacatcgga 12005566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 14783304 - 14783255
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataa 127  Q
    |||||||||||||||||||| |||||  |||||||||||| | |||||||    
T  14783304 tgttaagagtcccacatcggttaggagttgatctgacaatttgtttataa 14783255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 21646430 - 21646389
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgaggg 73  Q
    |||||||||| |||||||| | ||||||||||||||||||||    
T  21646430 tttatgtccatgaaccaagtccaatagtgttggtcgtgaggg 21646389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 22231426 - 22231373
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||| |||||||||| || |||| |||| ||||| ||||||||||    
T  22231426 gtgttaagagtcctacatcggatatgatatgacctgagaatatatttataagtg 22231373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 25324219 - 25324146
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||||||||| ||||   ||||| || ||| |||||||| |||||| ||||  |||||||||||||||||    
T  25324219 tccgctatcgggccacccaccatttatatctacgcaccaagcccaatagtattgggtgtgagggggtgtgttaa 25324146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 35609619 - 35609586
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggat 99  Q
    ||||||||||||||||||||||||||||| ||||    
T  35609619 cgtgagggggtgtgttaagagtcccacattggat 35609586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 35797095 - 35797042
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||| |||||| |||| ||||  ||||||||| ||||||||||    
T  35797095 gtgttaagagtcccatatcggacaggagatgacatgacaatatgtttataagtg 35797042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 36686007 - 36685974
Alignment:
Q  62 tggtcgtgagggggtgtgttaagagtcccacatc 95  Q
    |||||||||||| |||||||||||||||||||||    
T  36686007 tggtcgtgagggtgtgtgttaagagtcccacatc 36685974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 45784996 - 45784943
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||  ||||  ||||| ||| ||||||||||    
T  45784996 gtgttaagagtcccacatcggataggtgatgacttgacagtatgtttataagtg 45784943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 46661026 - 46660977
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataa 127  Q
    ||||||||||| ||||||||||| |  ||||||||||||||| |||||||    
T  46661026 tgttaagagtctcacatcggataagtaatgatctgacaatatatttataa 46660977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 53698989 - 53699046
Alignment:
Q  74 ggtgtgttaa-gagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||| |||||||||| || ||| || ||||||||||||||| ||||||||||    
T  53698989 ggtgtgttaaagagtcccacaacgaataagagatgatctgacaatatgtttataagtg 53699046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 53814824 - 53814787
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggatagga 103  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  53814824 cgtgagggggtgtgttaagagtccaacatcggttagga 53814787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 22845564 - 22845512
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||| |||| ||||||  |||||||| | ||||||||||    
T  22845564 tgttaagagtcccacatcagatatgacatggcctgacaatgtgtttataagtg 22845512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 35645882 - 35645830
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||| |||||  ||| ||||||||| | ||||||||||    
T  35645882 tgttaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtg 35645830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 37812450 - 37812333
Alignment:
Q  13 gctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctg 112  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  37812450 gctatcgggccacccactgtttatgtccacgaaccaagcccaataatgctggtcgtgagggggtgtgttaagagtcccacatcggataggacatggcctg 37812351  T
Q  113 acaatatttttataagtg 130  Q
    ||||| | ||||||||||    
T  37812350 acaatgtgtttataagtg 37812333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2029894 - 2030023
Alignment:
Q  1 tattaggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||||||| ||||||||||| || ||||   ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |    
T  2029894 tattaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggaca 2029993  T
Q  101 ggacatgatctgacaatatttttataagtg 130  Q
     ||||||| |||||||| | ||||||||||    
T  2029994 tgacatgacctgacaatgtgtttataagtg 2030023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 16419396 - 16419521
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||| ||| ||||   ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16419396 aggtttccgctatcgagccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggataggac 16419495  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    ||| ||||||||| | ||||||||||    
T  16419496 atggtctgacaatgtgtttataagtg 16419521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 5711629 - 5711504
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||| ||||||||| ||||   ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||     
T  5711629 aggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggaaaggaa 5711530  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  5711529 atggcctgacaatgtgtttataagtg 5711504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 14466365 - 14466240
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  14466365 aggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagttccacatcggacaggac 14466266  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  || ||||| | ||||||||||    
T  14466265 atggcctaacaatgtgtttataagtg 14466240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 33606244 - 33606120
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||||||| |||| ||||   ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||     
T  33606244 aggtttccgctatcaggccacccaccatttatgtccacgaaccaagcctaatagtgatggtcgtgaggtggtgtgttaagagtcccacatcggataggag 33606145  T
Q  105 atgatctgacaatatttttataagt 129  Q
    |||  |||| ||| | |||||||||    
T  33606144 atggcctgaaaatgtgtttataagt 33606120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 15124711 - 15124613
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||| | ||||||| |||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  15124711 tttatgtccacgaaccaagtccaatagtgctggttgtgaggggatgtgttaagagtcccacatcggatagaacatggtctgacaatatgtttataagtg 15124613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 17525289 - 17525167
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |||| ||||||||| |||||    
T  17525289 aggtatccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgatggtcgtgagtgggtgtgttaaaagtctcacatcggacaggac 17525190  T
Q  105 atgatctgacaatatttttataa 127  Q
    |||| |||||||| | |||||||    
T  17525189 atgacctgacaatgtgtttataa 17525167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 16533448 - 16533566
Alignment:
Q  12 cgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatct 111  Q
    |||||||||||| ||||   ||||||||||||||||||| | ||||||| |||||||||| ||||||||||||||||| ||| ||||||||  |||  ||    
T  16533448 cgctatcgggccacccaccatttatgtccacgaaccaaggccaatagtgctggtcgtgagagggtgtgttaagagtcctacaccggataggtgatggcct 16533547  T
Q  112 gacaatatttttataagtg 130  Q
    |||||| | ||||||||||    
T  16533548 gacaatgtgtttataagtg 16533566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 40379399 - 40379302
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||| ||| |||||||||| ||||   ||||| ||||||||||||||| || |||| ||||||||||| |||||||||||||||||||||||||||||    
T  40379399 aggtttcctctatcgggccacccaccatttatatccacgaaccaagcccaaaagtgctggtcgtgaggaggtgtgttaagagtcccacatcggatagg 40379302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 36352083 - 36351991
Alignment:
Q  38 tccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||||  ||||||||||||| | || |||||||| | ||||||||||    
T  36352083 tccacgaacgaagcccaatagtgttggtcgtgatggggtgtgttaagagtcttacatcggataggagacgacctgacaatgtgtttataagtg 36351991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 40149183 - 40149068
Alignment:
Q  13 gctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctg 112  Q
    |||||||| || |||| | ||||||||||||||||||||| ||||||| |||||||||  |||||||||||||||| |||||||||||| | |||| ||     
T  40149183 gctatcggaccacccactatttatgtccacgaaccaagcccaatagtgctggtcgtga--gggtgtgttaagagtctcacatcggatagaagatgaccta 40149086  T
Q  113 acaatatttttataagtg 130  Q
    ||| | | ||||||||||    
T  40149085 acagtgtgtttataagtg 40149068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 24396019 - 24396118
Alignment:
Q  32 tttatgtccacgaaccaagcct--aatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    |||||||||| ||||||||||   ||| ||||||||| |||||||||||||||||||||||||||||||||  | |||  |||||||||| |||||||||    
T  24396019 tttatgtccatgaaccaagcccccaatggtgttggtcatgagggggtgtgttaagagtcccacatcggatataagatggcctgacaatatgtttataagt 24396118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 44404107 - 44404019
Alignment:
Q  14 ctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||||||| | |||| | |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||  |||||| |||||    
T  44404107 ctatcgggtcacccactatttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgtgttaagagtcatacatcgaatagg 44404019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 4662198 - 4662250
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  4662198 tgttaagagtcccacatcggataggacatgacctgacaatatgtttataagtg 4662250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 93281 - 93215
Alignment:
Q  33 ttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    ||||||||||||| |||||| ||||||| ||||||||   ||||||||||||||||||||||||||||||    
T  93281 ttatgtccacgaatcaagcccaatagtgctggtcgtg---gggtgtgttaagagtcccacatcggatagg 93215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 2029736 - 2029788
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  2029736 tgttaagagtcccacatcggataggacatgacctgacaatgtgtttataagtg 2029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 21383480 - 21383384
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcggata 100  Q
    |||| |||||||| ||||| |||||| ||||| |||||| |||||||  ||||||| |||  ||||||||||||||| ||||||||| |||||||||    
T  21383480 aggtttccgctattgggccacccattatttatatccacgcaccaagcacaatagtggtgggtgtgagggggtgtgttaaagagtcccgcatcggata 21383384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 5711798 - 5711740
Alignment:
Q  72 ggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||| ||||||||  |||||||| | ||||||||||    
T  5711798 ggggtgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 5711740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 37812616 - 37812563
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||| ||||||| |||||||| | ||||||||||    
T  37812616 gtgttaagagtcccacatcggataagacatgacctgacaatgtgtttataagtg 37812563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 12343738 - 12343687
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaat 117  Q
    ||||||| |||||||||||||||||||||||||||||| ||| | |||||||    
T  12343738 cgtgaggtggtgtgttaagagtcccacatcggataggagatggtttgacaat 12343687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 34515595 - 34515658
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatc 95  Q
    |||||||| |||||||||||| |||| || || |||||| ||| ||||||||||||||||||||    
T  34515595 tttatgtctacgaaccaagccaaataatgctgatcgtgacgggttgtgttaagagtcccacatc 34515658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 18607172 - 18607102
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||||||| |||||||||||| ||||||| | |||||| ||| ||||||| |||||| |||||| ||||||    
T  18607172 tttatgtctacgaaccaagcccaatagtgctagtcgtgtgggtgtgtgtttagagtctcacatcagatagg 18607102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 42895382 - 42895455
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||||||||  ||||   |||||||||  ||||||| ||||||||||||||||||||| | |||||||||    
T  42895382 tccgctatcgggcgacccaccatttatgtccctgaaccaaacctaatagtgttggtcgtgagagcgtgtgttaa 42895455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 14466527 - 14466475
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||||  |||||||| | ||||||||||    
T  14466527 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 14466475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 17525455 - 17525403
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| | |||||| ||||||||| | ||||||||||    
T  17525455 tgttaagagtcccacatcggacatgacatggtctgacaatgtgtttataagtg 17525403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 37840304 - 37840356
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||| |||||||| |||| |||||||| | ||||||||||    
T  37840304 tgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtg 37840356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 41069263 - 41069327
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatc 95  Q
    ||||||||||||||||||||  ||||||  |||||||||||| ||||||| ||||||||| ||||    
T  41069263 tttatgtccacgaaccaagctcaatagtactggtcgtgagggagtgtgttaaagagtcccgcatc 41069327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 13250185 - 13250134
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||||||||| || ||| ||||||| ||||||||||||| ||||||||    
T  13250185 tttatgtccacgaagcatgcccaatagtgatggtcgtgaggggatgtgttaa 13250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 25082670 - 25082603
Alignment:
Q  62 tggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    |||| |||||||||||||||||||||| || ||| |||| || ||| ||||||||| | |||||||||    
T  25082670 tggttgtgagggggtgtgttaagagtctcatatcagataagagatggtctgacaatgtgtttataagt 25082603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 32356539 - 32356631
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttata 126  Q
    |||||||||||||||||| |  |||||||||||| ||||  | |||| |||||||| |||||||||| | || |||| |||| ||||| ||||||    
T  32356539 tttatgtccacgaaccaaactgaatagtgttggttgtga--gagtgtattaagagttccacatcggacatgagatgaactgataatatatttata 32356631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 2324205 - 2324259
Alignment:
Q  76 tgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||| |||||  || ||||||||| | ||||||||||    
T  2324205 tgtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtg 2324259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 130
Target Start/End: Complemental strand, 27036535 - 27036477
Alignment:
Q  72 ggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  27036535 ggggtgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 27036477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 17854821 - 17854784
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggatagga 103  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  17854821 cgtgaaggggtgtgttaagagtcccacatcggttagga 17854784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 36063304 - 36063353
Alignment:
Q  34 tatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||||||||||| ||||||||||||| |||| |  |||||||||||    
T  36063304 tatgtccacgaaccaaacctaatagtgttgatcgtaaaagggtgtgttaa 36063353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 38021030 - 38021001
Alignment:
Q  76 tgtgttaagagtcccacatcggataggaca 105  Q
    ||||||||||||||||||||||||||||||    
T  38021030 tgtgttaagagtcccacatcggataggaca 38021001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 2324429 - 2324493
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||| ||||||||||||||||||||||||| ||| |  ||  |||||||| | ||||||||||    
T  2324429 cgtgagagggtgtgttaagagtcccacatcggttagaagttggcctgacaatttgtttataagtg 2324493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 10523207 - 10523259
Alignment:
Q  66 cgtgagggggtgtgttaa-gagtcccacatcggataggacatgatctgacaat 117  Q
    |||||||| ||||||||| ||||||||||||||||| || ||| |||||||||    
T  10523207 cgtgagggagtgtgttaaagagtcccacatcggataagagatggtctgacaat 10523259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 12343867 - 12343815
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||| ||| || |||||| |  |||||||||    
T  12343867 tgttaagagtcccacatcggataggagatggtcagacaatgtgcttataagtg 12343815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 17719367 - 17719419
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||  |||  |||||||| | ||||||||||    
T  17719367 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 17719419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 19110399 - 19110455
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtc 88  Q
    |||||| |||||||||||||  ||||||| || ||||||| | ||||||||||||||    
T  19110399 tttatgcccacgaaccaagctcaatagtgctgatcgtgagagtgtgtgttaagagtc 19110455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 21861423 - 21861548
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  21861423 aggtttccgctatcgggccacccaccatttatgtccacgaaccaagcctaatagtgctggtcgtgagggggtgtgttaagagttccacatcggacaggac 21861522  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  21861523 atggcctgacaatgtgtttataagtg 21861548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 29469739 - 29469859
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgat 109  Q
    |||||||||||||| ||||   |||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||      
T  29469739 tccgctatcgggccacccaccatttatgtccacgaatcaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggacaggacatggc 29469838  T
Q  110 ctgacaatatttttataagtg 130  Q
    |||||||| | ||||||||||    
T  29469839 ctgacaatgtgtttataagtg 29469859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 1596722 - 1596847
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||| |||||    
T  1596722 aggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagagtgtgtgttaagagtcccacatcggacaggac 1596821  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  || ||||| ||||||||||||    
T  1596822 atggcctaacaatgtttttataagtg 1596847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 3519915 - 3519790
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||      
T  3519915 aggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagggggtgtgttaagagtcccacatcggataggtg 3519816  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  3519815 atggcctgacaatgtgtttataagtg 3519790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 6001598 - 6001500
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| | |||| |||||||||| ||||||||||    
T  6001598 tttatttccacgaaccaagcctaataatgctggtcgtgagggagtgtgttaagagtcccacatcggatagaagatgacctgacaatatgtttataagtg 6001500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 25620265 - 25620377
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||| ||||| ||||   ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| ||||| ||||||||    
T  25620265 aggtttccgctattgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaaggtgtgtgttaagagtcctacatcagataggac 25620364  T
Q  105 atgatctgacaat 117  Q
    |||| ||||||||    
T  25620365 atgacctgacaat 25620377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 33834329 - 33834432
Alignment:
Q  14 ctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctga 113  Q
    |||||||||| ||||   ||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||| |||||    
T  33834329 ctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaaggggtgggttaagagtcccacatcggataggtgatggtctga 33834428  T
Q  114 caat 117  Q
    ||||    
T  33834429 caat 33834432  T

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Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 33996269 - 33996148
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||| |||||||| ||||   ||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||||||| |||    
T  33996269 aggtttccgcaatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttgatcgtgagggtgtgagttaagagtcccacatcggataagac 33996170  T
Q  105 atgatctgacaatatttttata 126  Q
    ||  ||||||||| | ||||||    
T  33996169 attgtctgacaatgtgtttata 33996148  T

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Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 40746195 - 40746121
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatg 107  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  40746195 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggg-tgtgttaagagtcccacatcggataggacatg 40746121  T

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Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 31892308 - 31892406
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||| |||||||||| | ||||||  ||||||| | ||||||||||    
T  31892308 tttatgtccacgaaccaagcccaataatgatggtcgtgagggggtgtgttaagagtctcacatcggatggaacatgacatgacaatgtatttataagtg 31892406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 36277181 - 36277056
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||||||||| || ||||   ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| || | | |    
T  36277181 aggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtctcacatcagacatggc 36277082  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    ||  ||||||||| | ||||||||||    
T  36277081 atagtctgacaatgtgtttataagtg 36277056  T

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Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 14540904 - 14540807
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||| ||||||||||| || |||||||||||||| |||| |||||||| | |||||||||    
T  14540904 tttatgtccacaaaccaagcccaatagtgctggtcatgagggtgtgtgttaagaatcacacatcggataggagatgacctgacaatgtgtttataagt 14540807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 22574757 - 22574825
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  22574757 tttatgtctacgaaccaagcccaatagtgttggtcgtgaggtggtgtgttaagagtctcacatcggata 22574825  T

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Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 2404337 - 2404239
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||  ||||||| |||||||||| || |||||||||||||||||||||| ||||| |||  |||||||| | ||||||||||    
T  2404337 gtttatgtccacgaaccaagcgcaatagtgctggtcgtgagagg-tgtgttaagagtcccacatcggttaggagatggactgacaatgtgtttataagtg 2404239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 2315189 - 2315127
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacat 94  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  2315189 tttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtattaagattcccacat 2315127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 21821962 - 21822028
Alignment:
Q  34 tatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  21821962 tatgtccacgaaccaggcataatagtgttggtcgtgagggggtgtgttaacagttccacatcggata 21822028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 48243216 - 48243126
Alignment:
Q  38 tccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||| |  ||| ||||||||| | ||||||||||    
T  48243216 tccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaagagtcccacatcagatatg--atggtctgacaatgtgtttataagtg 48243126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 9689026 - 9688964
Alignment:
Q  39 ccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatag 101  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  9689026 ccacgaaccaagcccaatagtgttgatcgtgagggggggtgttaagagttccacatcggatag 9688964  T

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Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 18826438 - 18826345
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagga 103  Q
    |||||||||| ||| ||||   |||||| |||||||||||||| ||| ||||||||| ||||||| ||||||||||||| ||||||| ||||||    
T  18826438 tccgctatcgagccacccaccatttatgaccacgaaccaagcccaattgtgttggtcatgaggggatgtgttaagagtctcacatcgaatagga 18826345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 31485605 - 31485525
Alignment:
Q  14 ctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacat 94  Q
    |||||||||| ||||   ||||| |||||||| ||| || |||||||||| ||||||||||||||||||||||||||||||    
T  31485605 ctatcgggccacccaccatttatatccacgaatcaaacccaatagtgttgttcgtgagggggtgtgttaagagtcccacat 31485525  T

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Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 48661510 - 48661430
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttgg-tcgtgagggggtgtgttaag 84  Q
    |||| |||||| ||||||| ||||   ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  48661510 aggtttccgctttcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggttcgtgagggggtgtgttaag 48661430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 35308310 - 35308211
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||| ||||||| |||||||||  | ||||||||||| || |||||| ||||||| |||   ||||||| | ||||||||||    
T  35308310 gtttatgtccacgaaccaagcccaatagtgctggtcgtgaatgagtgtgttaagaatctcacatcagataggagatgtcatgacaatgtgtttataagtg 35308211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 36993258 - 36993140
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgat 109  Q
    |||||||| || || |||| | ||||||| |||||| ||||   ||||||| ||||||||||| | |||||||||||| | |||||||||| |||||| |    
T  36993258 tccgctattggaccacccactatttatgttcacgaatcaagttcaatagtgctggtcgtgaggtg-tgtgttaagagttcaacatcggatatgacatggt 36993160  T
Q  110 ctgacaatatttttataagt 129  Q
    |||||||| | |||||||||    
T  36993159 ctgacaatgtgtttataagt 36993140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 26240035 - 26239981
Alignment:
Q  76 tgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||| ||||||||||||||||| ||||||||| | ||||||||||    
T  26240035 tgtgttaagagtccgacatcggataggacatggtctgacaatgtgtttataagtg 26239981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 43688278 - 43688224
Alignment:
Q  76 tgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||||||||  |||||||| | ||||||||||    
T  43688278 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 43688224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 48661115 - 48661061
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttgg-tcgtgagggggtgtgttaag 84  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  48661115 gtttatgtccacgaaccaagcccaatagtgttggttcgcgagggggtgtgttaag 48661061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 48661238 - 48661184
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttgg-tcgtgagggggtgtgttaag 84  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  48661238 gtttatgtccacgaaccaagcccaatagtgttggttcgcgagggggtgtgttaag 48661184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 48661361 - 48661307
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttgg-tcgtgagggggtgtgttaag 84  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  48661361 gtttatgtccacgaaccaagcccaatagtgttggttcgcgagggggtgtgttaag 48661307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 2544344 - 2544280
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||| ||||||||||||||||||||| |||||  || ||||||||| | ||||||||||    
T  2544344 cgtgagggggggtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtg 2544280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 3519967 - 3519924
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgaggggg 75  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  3519967 tttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 3519924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 4507089 - 4507154
Alignment:
Q  33 ttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||||||||| |||||| |||||||||||||||||||| || |||||||||||||| |||||| ||||    
T  4507089 ttatgtccacaaaccaa-cctaatagtgttggtcgtga-ggagtgtgttaagagtctcacatcagata 4507154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 28080821 - 28080919
Alignment:
Q  32 tttatgtccacgaaccaagcct--aatagtgttggtcgtgagg-gggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataa 127  Q
    ||||||| |||||||||||||   |||||||||| | |||||| |||||||||||||||| ||| || ||||| | ||| ||||||||||| |||||||    
T  28080821 tttatgttcacgaaccaagcccccaatagtgttgattgtgaggagggtgtgttaagagtcgcacctcagatagaagatggtctgacaatatgtttataa 28080919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35308435 - 35308348
Alignment:
Q  1 tattaggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtc 88  Q
    |||||||| | |||||||||| | ||||| || |||||||||||||||| || |||| ||||||| ||||  ||||||||||| ||||    
T  35308435 tattaggttttcgctatcgggtcacccatcgtctatgtccacgaaccaaacccaataatgttggttgtgatagggtgtgttaacagtc 35308348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 27939117 - 27939171
Alignment:
Q  54 aatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatga 108  Q
    ||||||||||||||||||||||||||||||| | |||||||  ||||||| ||||    
T  27939117 aatagtgttggtcgtgagggggtgtgttaagcggcccacatttgataggagatga 27939171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 30727309 - 30727231
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||| |||||||| ||||| ||||   ||||| ||||| ||| ||||| ||||||||||| ||||||||||||||||||    
T  30727309 aggtttccgctattgggccacccaccatttatatccacaaactaagcccaatagtgttgggcgtgagggggtgtgttaa 30727231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 48660992 - 48660938
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttgg-tcgtgagggggtgtgttaag 84  Q
    |||||||||||||||||||||| ||||||||||| | |||| |||||||||||||    
T  48660992 gtttatgtccacgaaccaagcccaatagtgttggtttgtgacggggtgtgttaag 48660938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 18826606 - 18826553
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||| |||||||| |||| |||||||| | ||||||||||    
T  18826606 gtgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtg 18826553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 21861261 - 21861314
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    ||||||||||||||||||||| ||||||||  |||||||| | |||||||||||    
T  21861261 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtga 21861314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 4886485 - 4886548
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcg 96  Q
    ||||||||||||||||||||| ||||||  ||||||||||||  ||| ||||||||| |||||||    
T  4886485 tttatgtccacgaaccaagcccaatagtactggtcgtgagggaatgt-ttaagagtctcacatcg 4886548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 29469572 - 29469624
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||||  |||||||| | ||||||||||    
T  29469572 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 29469624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 34027348 - 34027412
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||| ||||||||||| |||||  ||  |||||||| | ||||||||||    
T  34027348 cgtgagggggtgtgttaagaatcccacatcggttaggagttggcctgacaatttgtttataagtg 34027412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 40898878 - 40898822
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtc 88  Q
    ||||||||||||||||||||  |||||||||||  |||| || ||||||||||||||    
T  40898878 tttatgtccacgaaccaagctcaatagtgttggctgtgacggtgtgtgttaagagtc 40898822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 46452599 - 46452651
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||||||| |  ||||| | ||||||||||    
T  46452599 tgttaagagtcccacatcggataggacatgaccacacaatgtgtttataagtg 46452651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 44874462 - 44874411
Alignment:
Q  79 gttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||| || | |||||||| | ||||||||||    
T  44874462 gttaagagtcccacatcggataggagataacctgacaatgtgtttataagtg 44874411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 5871739 - 5871685
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagag 86  Q
    |||||||| ||||||||| |  ||||||| ||||||||||||||||||| |||||    
T  5871739 tttatgtcaacgaaccaaactcaatagtgctggtcgtgagggggtgtgtaaagag 5871685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 22590816 - 22590862
Alignment:
Q  153 gaaatgattagtaattacaatgaccaaaactcaagtgacccatattt 199  Q
    |||||||||| |||||| | ||| |||||||||||||||||||||||    
T  22590816 gaaatgattaataattatattgatcaaaactcaagtgacccatattt 22590862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 4267820 - 4267873
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| |||||  || ||||||||| | ||||||||||    
T  4267820 gtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtg 4267873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 20305558 - 20305521
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggatagga 103  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  20305558 cgtgagggagtgtgttaagagtcccacatcgggtagga 20305521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 95
Target Start/End: Original strand, 34027582 - 34027611
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatc 95  Q
    ||||||||||||||||||||||||||||||    
T  34027582 cgtgagggggtgtgttaagagtcccacatc 34027611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 36993416 - 36993367
Alignment:
Q  82 aagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    |||||| |||||||| |||||| ||| ||||||||||| |||||||||||    
T  36993416 aagagttccacatcgaataggatatggtctgacaatatgtttataagtga 36993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 41190981 - 41191034
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    |||||||||||||||||| |||| |  || |||||||||||| |||||||||||    
T  41190981 tgttaagagtcccacatcagatatgtgataatctgacaatatgtttataagtga 41191034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 1596561 - 1596613
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||||  |||||||| | || |||||||    
T  1596561 tgttaagagtcccacatcggacaggacatggcctgacaatgtgttaataagtg 1596613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 1936276 - 1936212
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatc 95  Q
    |||||||| |||||||| ||| ||||||||||||| ||| | |||||||| ||||||| ||||||    
T  1936276 tttatgtcaacgaaccatgcccaatagtgttggtcatgaagaggtgtgttaaagagtcacacatc 1936212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 4268013 - 4268073
Alignment:
Q  70 agggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||| | |||||  ||  |||||||| | ||||||||||    
T  4268013 agggggtgtgttaagagtcccacatcagttaggagttggcctgacaatttgtttataagtg 4268073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 21055070 - 21055018
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||| ||||||||||  |||  |||||||||| ||||||||||    
T  21055070 tgttaagagtcccatatcggataggtgatggcctgacaatatgtttataagtg 21055018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 22339528 - 22339480
Alignment:
Q  35 atgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||||||| ||||| |||||||||| |||||| || |||||||||    
T  22339528 atgtccacgaacaaagcccaatagtgttgatcgtgaaggagtgtgttaa 22339480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 48661672 - 48661624
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttata 126  Q
    |||||||||||||||||| ||||||| |||| |||||||| | ||||||    
T  48661672 tgttaagagtcccacatcagataggagatgacctgacaatgtatttata 48661624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 25713292 - 25713412
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgat 109  Q
    |||||||||||||| ||||   ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |    
T  25713292 tccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggggtgttaagagtcccacatcggataggtgatggt 25713391  T
Q  110 ctgacaatatttttataagtg 130  Q
    |||||||| | ||||||||||    
T  25713392 ctgacaatgtgtttataagtg 25713412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 4112934 - 4112836
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| |||||||  |||||||| | ||||||||||    
T  4112934 tttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggatgggacatggcctgacaatgtgtttataagtg 4112836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 2859586 - 2859457
Alignment:
Q  1 tattaggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||||||| || ||||||||||| ||||   ||||||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  2859586 tattaggtttctgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggggtgataagagtcccacatcggata 2859487  T
Q  101 ggacatgatctgacaatatttttataagtg 130  Q
    ||  |||  |||||||| | ||||||||||    
T  2859486 ggtgatggcctgacaatgtgtttataagtg 2859457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 17412471 - 17412588
Alignment:
Q  15 tatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgac 114  Q
    ||||| ||| |||||  |||||||||||||| |||||| ||||||||||||||||| |||||||||||| ||||||||||| ||||||| |||| |||||    
T  17412471 tatcgagccacccatcatttatgtccacgaatcaagcccaatagtgttggtcgtgatggggtgtgttaaaagtcccacatcagataggagatgacctgac 17412570  T
Q  115 aatatttttataagtgat 132  Q
    ||| | ||||||||||||    
T  17412571 aatgtgtttataagtgat 17412588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 35772158 - 35772283
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||| |||||||  ||| ||||| |||||||||||||||||||||||||||||||     
T  35772158 aggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgccggttgtgagcgggtgtgttaagagtcccacatcggataggag 35772257  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  35772258 atggcctgacaatgtgtttataagtg 35772283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 27413481 - 27413601
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgat 109  Q
    |||||||||||||| ||||   |||||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||| |||||  |||      
T  27413481 tccgctatcgggccacccaccatttatgtccacgaatcaagcccaatagtgttggtcgtgagagggtgtgttaaaagtcccacatcgcataggtgatggc 27413580  T
Q  110 ctgacaatatttttataagtg 130  Q
    |||||||||| ||||||||||    
T  27413581 ctgacaatatgtttataagtg 27413601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 4112703 - 4112606
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    |||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||   ||||||| | |||||||||    
T  4112703 tttatgtcaacgaaccaagcccaatagtgttggtcgtgagggggggtgttaagagtcccacatcggacaggacatggcatgacaatgtgtttataagt 4112606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 26177042 - 26177162
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgat 109  Q
    ||||||||||| || ||||   ||||| ||||||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||     
T  26177042 tccgctatcggaccacccaccatttatatccacgaaccaagtccaatagtgctggtcgtgacggggtgtgttaagagtcccacatcggacaggacatgac 26177141  T
Q  110 ctgacaatatttttataagtg 130  Q
    |||||||  | ||||||||||    
T  26177142 ctgacaacgtgtttataagtg 26177162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 52961476 - 52961602
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||    |||||| |||||| |||||  ||||||| | ||||||||||||||||||||| ||||||||||||||||||     
T  52961476 aggtttccgctatcgggccacccaccagttatgtacacgaaacaagctcaatagtgctagtcgtgagggggtgtgttaagtgtcccacatcggataggag 52961575  T
Q  105 atgatctgacaatatttttataagtga 131  Q
    ||| ||||||||| | |||||||||||    
T  52961576 atggtctgacaatgtgtttataagtga 52961602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 33156863 - 33156986
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||||||||||||  |||   |||||||||||||| |||||| ||||||||   ||||||||||| ||||||||||| |||||||||||||||     
T  33156863 aggtttccgctatcgggccatccaccatttatgtccacgaatcaagcccaatagtgtcaatcgtgagggggcgtgttaagagttccacatcggataggag 33156962  T
Q  105 atgatctgacaatatttttataag 128  Q
    ||| ||||||||| | ||||||||    
T  33156963 atggtctgacaatgtgtttataag 33156986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 8870852 - 8870754
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||||| ||  ||| | ||||||| | ||||||||||    
T  8870852 tttatgtccacgaaccaaacccaattgtgctggtcgtgagggggtgtgttaagagtcccacatcggatcggtgatggtgtgacaatgtgtttataagtg 8870754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 16163062 - 16163186
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| || |   ||||||||||||| ||||||| | ||||| |||||||||||| ||||||||||||||||||||||||||||      
T  16163062 aggtttccgctatcgggccacctaccatttatgtccacgagccaagccca-tagtgctggtcgtgagggtgtgtgttaagagtcccacatcggataggtg 16163160  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    ||||  ||||||| | ||||||||||    
T  16163161 atgacttgacaatgtgtttataagtg 16163186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 25145645 - 25145550
Alignment:
Q  35 atgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||| |||||  ||||||| ||||||||||||||||||||||||||| |||||||||||||  ||| ||||||||| | ||||| ||||    
T  25145645 atgtccacgaatcaagctcaatagtgctggtcgtgagggggtgtgttaagagtctcacatcggataggtgatggtctgacaatgtgtttattagtg 25145550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 34264649 - 34264550
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    ||||| || |||||||||||  ||||||| |||||||||||||||||||||||| || |||||| |||| || ||||||||||||| | |||||||||||    
T  34264649 tttatatcgacgaaccaagcacaatagtgctggtcgtgagggggtgtgttaagaatctcacatcagataagagatgatctgacaatgtatttataagtga 34264550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 38733303 - 38733402
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    ||||| || |||||| ||||| ||||||| ||||||||| | ||||||||||||||||||||||||||| |  ||| ||||||||||| |||||||||||    
T  38733303 tttatatctacgaactaagcccaatagtgctggtcgtgaagaggtgtgttaagagtcccacatcggatatgtgatggtctgacaatatgtttataagtga 38733402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 39348280 - 39348184
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||||  |||||||||||||||||||||| ||   |||||||| | ||||||||||    
T  39348280 tttatgtccacgaaccaagcccaatagtgctggtcgtgacggggtgtg--aagagtcccacatcggataggagatagcctgacaatgtgtttataagtg 39348184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 38668281 - 38668379
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||| |||||||||| |||| || |||||||||| |||||||||||||||||||||||||||| |  ||| | ||||||| | ||||||||||    
T  38668281 tttatgtccatgaaccaagcccaatattgctggtcgtgagtgggtgtgttaagagtcccacatcggatatgtgatggtttgacaatgtgtttataagtg 38668379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 51459868 - 51459798
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||||||| |||||||||||| ||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  51459868 tttatgtctacgaaccaagcccaattgtgctggtcgtgagggggtgtgttaagagtcccatatcggatagg 51459798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 7307877 - 7307943
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcgga 98  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||| |||||||||    
T  7307877 tttatgtccacgaaccaaatccaatagtgttggtcgtgagggggtgtattaagagtctcacatcgga 7307943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 35892212 - 35892310
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||  ||||| ||| ||| |||||||||| ||||||||||||||||||||||| ||||  | ||| ||||||||| | ||||||||||    
T  35892212 tttatgtccacgaattaagcccaattgtgctggtcgtgagagggtgtgttaagagtcccacatcagatataagatggtctgacaatgtatttataagtg 35892310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 51460245 - 51460175
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||||| ||| |||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||||||    
T  51460245 tttatgcccaagaaccaagcccaattgtgctggccgtgagggggtgtgttaagagtcccacatcggatagg 51460175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 12325460 - 12325396
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatc 95  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||    
T  12325460 tttatgtccacgaaccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtctcacatc 12325396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 12376601 - 12376537
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatc 95  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||    
T  12376601 tttatgtccacgaaccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtctcacatc 12376537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 51459992 - 51459923
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    ||||||||||||||| || || ||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  51459992 tttatgtccacgaacaaaccc-aattgtgctggtcgtgagggtgtgtgttaagagtcccacatcggatagg 51459923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 369788 - 369841
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaaga 85  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  369788 tttatgtccacgaaccaagcccaatagtgctggtcgtgaggggatgtgttaaga 369841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 7653397 - 7653461
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcg 96  Q
    ||||||| |||||||||| |  |||||||||||||||||||| |||||||||| |||||||||||    
T  7653397 tttatgtacacgaaccaaacgcaatagtgttggtcgtgagggagtgtgttaagcgtcccacatcg 7653461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 20208643 - 20208591
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  20208643 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtg 20208591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 35303557 - 35303505
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  35303557 tgttaagagtcccacatcggatagaacatgatctgacaatgtatttataagtg 35303505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 4098350 - 4098288
Alignment:
Q  13 gctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgaggggg 75  Q
    ||||||||||| ||||   ||||||||||||||||||||| |||| |||||||||||||||||    
T  4098350 gctatcgggccacccaccctttatgtccacgaaccaagcccaataatgttggtcgtgaggggg 4098288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 51589185 - 51589246
Alignment:
Q  70 agggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    |||||||||||||||||||||||||||| |||||  || ||||||||| | |||||||||||    
T  51589185 agggggtgtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtga 51589246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 17208683 - 17208758
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgt 80  Q
    |||| |||||||||||||| ||||   ||||| |||||  |||||||| ||||||||||| |||||||||||||||    
T  17208683 aggtttccgctatcgggccacccaccatttatatccacccaccaagcccaatagtgttgggcgtgagggggtgtgt 17208758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 26173411 - 26173316
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||| ||||||||||| || ||||   ||||||||||||||| ||||  ||| ||| ||||||||||||| || | ||||||||||||||| ||||    
T  26173411 aggtttccgctatcggaccccccaccatttatgtccacgaactaagctcaattgtgctggtcgtgaggggttgagctaagagtcccacatcagata 26173316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 3169956 - 3170021
Alignment:
Q  67 gtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatat-ttttataagtga 131  Q
    ||||||| ||||||||||||||||||||||| |||||  || ||||||||| | ||||||||||||    
T  3169956 gtgagggtgtgtgttaagagtcccacatcggttaggagttggtctgacaatttgttttataagtga 3170021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 12489128 - 12489032
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    ||||| ||||| ||||||||| ||||| | || ||| | |||||||||||| |||| | ||||| ||||||| |||| |||||||||| |||||||||    
T  12489128 tttatatccacaaaccaagcccaatagggctgatcgcg-gggggtgtgttatgagttcgacatcagataggagatgacctgacaatatgtttataagt 12489032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 51589995 - 51590060
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    |||||||||||||||||||||||||||||| | |||||  |  ||||||||| | |||||||||||    
T  51589995 cgtgagggggtgtgttaagagtcccacatcagttaggagtttgtctgacaatttgtttataagtga 51590060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 17452945 - 17452893
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||| ||||||  |||||||| | ||||||||||    
T  17452945 tgttaagagtcccacatcggataagacatggcctgacaatgtatttataagtg 17452893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 17468315 - 17468363
Alignment:
Q  82 aagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||| || ||| ||||||||||| ||||||||||    
T  17468315 aagagtcccacatcggataagagatggtctgacaatatgtttataagtg 17468363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 43409774 - 43409826
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||| |||||||||||| ||||| ||||||||| | ||||||||||    
T  43409774 tgttaagagtctcacatcggatagaacatggtctgacaatgtatttataagtg 43409826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 9146717 - 9146651
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcgga 98  Q
    ||||||||||||||||||||  ||||||| | ||||||| |||||||||| | |||||||||||||||    
T  9146717 tttatgtccacgaaccaagctcaatagtgctagtcgtga-ggggtgtgttcacgagtcccacatcgga 9146651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 26229722 - 26229773
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||||||||||||||| |||||| |||||||||||   ||||||||||    
T  26229722 tttatgtccacgaaccaagcttaatagcgttggtcgtgaaatggtgtgttaa 26229773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 39100485 - 39100596
Alignment:
Q  15 tatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgac 114  Q
    ||||||| | |||| | |||||||||||||| ||| || |||||   |||||||||| ||| ||||||||||||| | ||  ||||||| || | |||||    
T  39100485 tatcgggtcacccactatttatgtccacgaatcaaacccaatagaactggtcgtgagagggggtgttaagagtccaatatttgataggagataacctgac 39100584  T
Q  115 aatatttttata 126  Q
    ||||| ||||||    
T  39100585 aatatatttata 39100596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 11524898 - 11524983
Alignment:
Q  12 cgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtga-gggggtgtgttaagagtcccacatcgg 97  Q
    ||||||| |||| |||| | ||||| |||||| |||||| ||||||||||||| | ||| |||||||| | ||||||||||||||||    
T  11524898 cgctatctggccacccactatttatatccacgcaccaagtctaatagtgttgggcatgatgggggtgt-taaagagtcccacatcgg 11524983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 11525113 - 11525198
Alignment:
Q  12 cgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtga-gggggtgtgttaagagtcccacatcgg 97  Q
    ||||||| |||| |||| | ||||| |||||| |||||| ||||||||||||| | ||| |||||||| | ||||||||||||||||    
T  11525113 cgctatctggccacccactatttatatccacgcaccaagtctaatagtgttgggcatgatgggggtgt-taaagagtcccacatcgg 11525198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 40189148 - 40189086
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacat 94  Q
    ||||| |||||| |||||||| |||||||||||  ||||||| ||||||| ||||| ||||||    
T  40189148 tttatatccacgcaccaagcccaatagtgttggatgtgagggtgtgtgttgagagttccacat 40189086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 3169732 - 3169785
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| |||||  || ||||||||| | ||||||||||    
T  3169732 gtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtg 3169785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 26176875 - 26176928
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    ||||||||||||||||||||| ||||||||  |||||||| |  ||||||||||    
T  26176875 tgttaagagtcccacatcggacaggacatggcctgacaatgtgcttataagtga 26176928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 26603395 - 26603444
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataa 127  Q
    ||||||||||| ||||||| |||||| ||| ||||||||||| |||||||    
T  26603395 tgttaagagtctcacatcgaataggagatggtctgacaatatgtttataa 26603444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 51588959 - 51589012
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    |||||||||||||||||||| |||||  || ||||||||| | |||||||||||    
T  51588959 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtga 51589012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 4113123 - 4113071
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||| ||||||||||||||| |||||||  |||||||| | ||||||||||    
T  4113123 tgttaaaagtcccacatcggatgggacatggcctgacaatgtgtttataagtg 4113071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 9499405 - 9499465
Alignment:
Q  36 tgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcg 96  Q
    |||||||||||||  ||  || |||||||| |||| ||||||||||||||||| |||||||    
T  9499405 tgtccacgaaccatacccgatggtgttggttgtgaaggggtgtgttaagagtctcacatcg 9499465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 11924888 - 11924940
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||  |||||||||||||  ||| ||||||||||| ||||||||||    
T  11924888 tgttaagagttacacatcggataggtgatggtctgacaatatgtttataagtg 11924940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 26173573 - 26173521
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||| |||| || ||| ||||||||| | ||||||||||    
T  26173573 tgttaagagtcccacatcagatatgagatggtctgacaatgtgtttataagtg 26173521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 26865475 - 26865423
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||| ||||||||||||| | ||||||| |||||||| | ||||||||||    
T  26865475 tgttaagtgtcccacatcggacaagacatgacctgacaatgtatttataagtg 26865423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 41035944 - 41035892
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||| ||| ||||||||||||||  ||| |||||| ||||||||||    
T  41035944 tgttaagagtctcacgtcggataggacatggcctgccaatatgtttataagtg 41035892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 51460397 - 51460273
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||  ||||   ||| |||||||||||||| |  ||| ||| | ||||||||   ||||||||||||||| ||||| ||||||      
T  51460397 aggtttccgctatcgggcgacccaccatttgtgtccacgaaccaaactcaattgtgctagtcgtgagtatgtgtgttaagagtccaacatcagataggtg 51460298  T
Q  105 atgatctgacaatatttttataagt 129  Q
    |||| || ||||| | |||||||||    
T  51460297 atgacctaacaatgtgtttataagt 51460273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 13353330 - 13353453
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  13353330 aggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggacaggac 13353429  T
Q  105 atgatctgacaatatttttataag 128  Q
    |||  |||||||| | ||||||||    
T  13353430 atggcctgacaatgtgtttataag 13353453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 33796455 - 33796578
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  33796455 aggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggacaggac 33796554  T
Q  105 atgatctgacaatatttttataag 128  Q
    |||  |||||||| | ||||||||    
T  33796555 atggcctgacaatgtgtttataag 33796578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 17147823 - 17147725
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  17147823 tttatgtccacgaaccaagcccaatagtgctggttgtgagggggtgtgttaagagtcccacatcggataggacatgacctgacaatgtatttataagtg 17147725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 4868767 - 4868642
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||| ||||||||| ||||   ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  4868767 aggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggacaggac 4868668  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  4868667 atggcctgacaatgtgtttataagtg 4868642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 33494668 - 33494793
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||| |||||||||| ||||  |||||||| ||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||||||||     
T  33494668 aggtttccactatcgggccacccaccgtttatgttcacgaaccaagcccaatagtgctggtcgtgagttggtgtgttaagagtcccacatcggataggag 33494767  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    ||| ||||||||||| ||||||||||    
T  33494768 atggtctgacaatatatttataagtg 33494793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 3680137 - 3680265
Alignment:
Q  1 tattaggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||||||| |||||||||||| |  |||   ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  3680137 tattaggtttccgctatcgggtcatccaccatttatgtccacaaaccaagcccaatagtgttggtcgtgaggggg-gtgttaagagtcccacatcggata 3680235  T
Q  101 ggacatgatctgacaatatttttataagtg 130  Q
     |  ||| ||||||||| | ||||||||||    
T  3680236 tgtgatggtctgacaatgtgtttataagtg 3680265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 12330134 - 12330009
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||| |||||||| ||||   ||||||||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||||||| ||     
T  12330134 aggtttccgccatcgggccacccaccatttatgtccacgaaccaagcccaattatgctggtcgtgagggggtgtgttaagagtcccacatcggataagat 12330035  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    ||||| | ||||| | ||||||||||    
T  12330034 atgatataacaatgtgtttataagtg 12330009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 30256733 - 30256832
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||| ||||| || |||||||||||||| |||||||||| |||||||||||||||||||||  |||| |||||||||| ||||||||||    
T  30256733 tttatgtccacgaactaagcccaacagtgttggtcgtgatggggtgtgtttaagagtcccacatcggataggtgatgacctgacaatatgtttataagtg 30256832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 6400783 - 6400685
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| ||||||||| | ||||||  |||||||| | ||||||||||    
T  6400783 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggggggtgttaagagtctcacatcggacatgacatggcctgacaatgtgtttataagtg 6400685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 6542871 - 6542776
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataa 127  Q
    ||||||||||||||||||| | ||||  |||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||| | |||||||    
T  6542871 tttatgtccacgaaccaagtccaatatcgttggtcgtgagggtgtgtgttaagagtctcacatcggataggagatggtctgacaatctgtttataa 6542776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 9705160 - 9705250
Alignment:
Q  15 tatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatg 107  Q
    ||||||||| ||||   ||||||||||  ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9705160 tatcgggccacccaccatttatgtcca--aaccaagtccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggataggacatg 9705250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 30505631 - 30505743
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||| |||||| ||| |||||| |||||||| |||||||||||| || |||| ||||| |||||||| ||||||||||||||||||||||||  |     
T  30505631 aggtttcccctatcgtgccacccattctttatgtctacgaaccaagcccaacagtgatggtcatgagggggggtgttaagagtcccacatcggatataag 30505730  T
Q  105 atgatctgacaat 117  Q
    ||| |||||||||    
T  30505731 atggtctgacaat 30505743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 34345553 - 34345617
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcg 96  Q
    |||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||||||||    
T  34345553 tttatgtccacgaaccaaacacaatagtgttggtcatgagggggtgtgttaagagtcccacatcg 34345617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 6054324 - 6054422
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||| ||||||| || |||| || ||||||||| |||||||||||||||||| |||||||||| || ||| ||||||||  | ||||||||||    
T  6054324 gtttatgtccatgaaccaaacc-aataatgatggtcgtgacggggtgtgttaagagtccaacatcggataagagatggtctgacaaggtatttataagtg 6054422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 7638753 - 7638655
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||| |||||||||||| ||||||| | ||||||| ||| ||||||||||||| ||| || ||||||| |||| |||| ||| | ||||||||||    
T  7638753 tttatgtctacgaaccaagcccaatagtgctagtcgtgatgggctgtgttaagagtctcacgtcagataggagatgacctgataatgtgtttataagtg 7638655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 31961099 - 31961197
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||| |||||||| ||||||  | ||||||||||| |||||||||||||||||||| |||| |  |||  |||||||| | ||||||||||    
T  31961099 tttatgtccacggaccaagcccaatagtactagtcgtgaggggatgtgttaagagtcccacatcagatatgtgatggcctgacaatgtgtttataagtg 31961197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 25065209 - 25065160
Alignment:
Q  80 ttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  25065209 ttaagagtcccacatcggataggacatggtctgacaatatgtttataagt 25065160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 2736296 - 2736232
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||| ||||||||||||||| ||||| |||| |||||||| | ||||||||||    
T  2736296 cgtgagggggtgtgttgagagtcccacatcgggtaggagatgacctgacaatgtgtttataagtg 2736232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 12330407 - 12330355
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  12330407 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtg 12330355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 24554084 - 24554136
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  24554084 tgttaagagtcccacatcggataggagatggtctgacaatatatttataagtg 24554136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 12199919 - 12199870
Alignment:
Q  81 taagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||| || ||| ||||||||||| ||||||||||    
T  12199919 taagagtcccacatcggataagatatggtctgacaatatgtttataagtg 12199870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 6400963 - 6400911
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| | ||||||  |||||||||| ||||||||||    
T  6400963 tgttaagagtcccacatcggacatgacatggcctgacaatatgtttataagtg 6400911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 13353168 - 13353220
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||||  |||||||| | ||||||||||    
T  13353168 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 13353220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 15082037 - 15081973
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||| ||||||||||||||||||| ||| ||||| |||  |||||||||| |||| |||||    
T  15082037 cgtgagggtgtgtgttaagagtcccacaacggttaggagatggactgacaatatgtttacaagtg 15081973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 27772901 - 27772965
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||| ||||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  27772901 cgtgagggtgtgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 27772965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 33796293 - 33796345
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||||  |||||||| | ||||||||||    
T  33796293 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 33796345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 97
Target Start/End: Original strand, 8026577 - 8026608
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcgg 97  Q
    ||||||||||||||||||||||||||||||||    
T  8026577 cgtgagggggtgtgttaagagtcccacatcgg 8026608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 32290864 - 32290979
Alignment:
Q  12 cgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatct 111  Q
    |||||||||||| ||||   ||||||||||| || |||||| |||| || ||||||||||    |||||||| ||||||||||| ||||| | || ||||    
T  32290864 cgctatcgggccacccaccatttatgtccacaaatcaagcccaataatgctggtcgtgagtcaatgtgttaaaagtcccacatcagatagaagattatct 32290963  T
Q  112 gacaatatttttataa 127  Q
    | |||| | |||||||    
T  32290964 ggcaatgtgtttataa 32290979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 9496461 - 9496494
Alignment:
Q  45 accaagcctaatagtgttggtcgtgagggggtgt 78  Q
    |||||||||||||||||||| |||||||||||||    
T  9496461 accaagcctaatagtgttgggcgtgagggggtgt 9496494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 11085775 - 11085832
Alignment:
Q  73 gggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||| |||||| |||| |||||||||||||| |||| ||| |||||| ||||||||||    
T  11085775 gggtatgttaaaagtctcacatcggataggagatgacctgccaatatatttataagtg 11085832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 12330289 - 12330244
Alignment:
Q  85 agtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||| ||||||||||||||| ||||||||| | ||||||||||    
T  12330289 agtcccagatcggataggacatggtctgacaatgtgtttataagtg 12330244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 96
Target Start/End: Original strand, 21690912 - 21690941
Alignment:
Q  67 gtgagggggtgtgttaagagtcccacatcg 96  Q
    ||||||||||||||||||||||||||||||    
T  21690912 gtgagggggtgtgttaagagtcccacatcg 21690941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 33631733 - 33631684
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt 81  Q
    ||||||||||| ||||||||  ||||||| ||||||||||||| ||||||    
T  33631733 tttatgtccactaaccaagctcaatagtgctggtcgtgaggggatgtgtt 33631684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 34342978 - 34343035
Alignment:
Q  40 cacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcgg 97  Q
    ||||||| ||| | ||||||| ||| |||||| | |||||||||||||||||||||||    
T  34342978 cacgaacaaagtccaatagtgatggccgtgagagagtgtgttaagagtcccacatcgg 34343035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 2753225 - 2753277
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||   ||||||||||||| | ||||||||||    
T  2753225 tgttaagagtcccacatcggaaagatgatgatctgacaatgtgtttataagtg 2753277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 4868930 - 4868878
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||||  ||| |||| | ||||||||||    
T  4868930 tgttaagagtcccacatcggacaggacatggcctggcaatgtgtttataagtg 4868878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 6543060 - 6543008
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||| |||||||||||| || ||| ||||||||| | ||||||||||    
T  6543060 tgttaagagttccacatcggataagagatggtctgacaatgtgtttataagtg 6543008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 8567075 - 8567023
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||| |||||||||  ||| ||||||||| | ||||||||||    
T  8567075 tgttaagagtcccacctcggataggtgatggtctgacaatgtgtttataagtg 8567023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 9704987 - 9705039
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||| |||||||||||||||||   |||||||| | ||||||||||    
T  9704987 tgttaagagtctcacatcggataggacatagcctgacaatgtgtttataagtg 9705039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 27656414 - 27656477
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||| ||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  27656414 cgtgaggggg-gtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 27656477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 33494506 - 33494558
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||| |||   ||| ||||| ||||||||||    
T  33494506 tgttaagagtcccacatcggataggagatggcttgaaaatatgtttataagtg 33494558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 2623 - 2745
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| |||    |||||||| ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  2623 aggtttccgctatcgggccaccccccatttatgtctacgaaccaaacctaatagtgctgatcgtgagggggtgtgttaagagtcccacatcggataggac 2722  T
Q  105 atgatctgacaatatttttataa 127  Q
    ||| ||||||||||| |||||||    
T  2723 atggtctgacaatatatttataa 2745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 8081277 - 8081179
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | ||||||||||    
T  8081277 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtg 8081179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 24270060 - 24269935
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||| ||||||||| ||||   ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24270060 aggtttccgttatcgggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggataggac 24269961  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  24269960 atggcctgacaatgtgtttataagtg 24269935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 24346691 - 24346566
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||| ||||||||| ||||   ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24346691 aggtttccgttatcgggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggataggac 24346592  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  24346591 atggcctgacaatgtgtttataagtg 24346566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 30770231 - 30770114
Alignment:
Q  13 gctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctg 112  Q
    ||||||||||| ||||   ||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  30770231 gctatcgggccacccaccatttatgtccacgaaccaagcccaatagcgctggttgtgagggggtgtgttaagagtcccacatcggataggacatgacctg 30770132  T
Q  113 acaatatttttataagtg 130  Q
    ||||| |||||| |||||    
T  30770131 acaatgtttttaaaagtg 30770114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 41666947 - 41666822
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||| ||||||||| ||||   ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  41666947 aggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggacaggac 41666848  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  41666847 atggcctgacaatgtgtttataagtg 41666822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 95456 - 95331
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||| |||||||| ||||   ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||      
T  95456 aggtttccgccatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcacacatcggataggtg 95357  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||| |||||||| | ||||||||||    
T  95356 atgacctgacaatgtgtttataagtg 95331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 33337428 - 33337303
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||| |||||||| ||||   ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||| |||||||      
T  33337428 aggtttccgccatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcatgagggggtgtgttaagagtcccacattggataggtg 33337329  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||||| ||||||||||    
T  33337328 atggcctgacaatatgtttataagtg 33337303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 18333647 - 18333530
Alignment:
Q  12 cgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatct 111  Q
    |||||||||||| ||||   ||||||||||||||||||||| | ||||| ||||||||||||| |||||||||| ||||||||||||||||| ||| |||    
T  18333647 cgctatcgggccacccaccatttatgtccacgaaccaagcccattagtgctggtcgtgagggg-tgtgttaagaatcccacatcggataggagatggtct 18333549  T
Q  112 gacaatatttttataagtg 130  Q
    |||||| | ||||||||||    
T  18333548 gacaatgtgtttataagtg 18333530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 20510805 - 20510707
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||  |||  |||||||||| ||||||||||    
T  20510805 tttatgtccacgaaccaagcccaatagtgatgatcgtgagggggtgtgttaagagccccacatcggataggtgatggcctgacaatatgtttataagtg 20510707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 24528696 - 24528794
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| || ||||||||  |||||||| | | ||||||||    
T  24528696 tttatgtccacgaaccaagcctaatagtgcttgtcatgagggggtgtgttaagagtcccacatctgagaggacatggcctgacaatgtgtatataagtg 24528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 15480451 - 15480576
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||| ||||| ||||   |||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||| |||    
T  15480451 aggtttccgctattgggccacccaccatttatgtccatgaaccaagcctaatcgtgctggtcgtgaggaggtgtgttaagagtcccacatcagatatgac 15480550  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||  | ||||||||||    
T  15480551 atggcctgacaacgtgtttataagtg 15480576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 9368753 - 9368849
Alignment:
Q  34 tatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||   ||||||| | ||||||||||    
T  9368753 tatgtccacgaaccaaacccaatagtgctggtcgtgagggggtgtcttaagagtcccacatcggataggagatggcatgacaatgtgtttataagtg 9368849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 26137288 - 26137177
Alignment:
Q  16 atcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgaca 115  Q
    |||||||| |||||  ||||||||||||||||||| | |||| || | ||||||||||||||| ||||||||||||||||| |||||| ||||| |||||    
T  26137288 atcgggccacccatcatttatgtccacgaaccaagtccaataatgctagtcgtgagggggtgtattaagagtcccacatcgaataggaaatgatatgaca 26137189  T
Q  116 atatttttataa 127  Q
    | || |||||||    
T  26137188 acatgtttataa 26137177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 38731765 - 38731667
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    |||||||||| |||||||||| ||||||| ||||||||||||| ||||||||| || ||||||||||||||| |||| |||||||| | |||||||||||    
T  38731765 tttatgtccatgaaccaagcccaatagtgctggtcgtgagggg-tgtgttaagtgttccacatcggataggagatgacctgacaatttatttataagtga 38731667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 43117776 - 43117898
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtccc-acatcggatagga 103  Q
    |||| ||||||||||| || |||||  ||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| || ||||| ||||    
T  43117776 aggtttccgctatcggaccacccatcatttatgtccacgaaccaagctcaatagtgttggtcgtgaggggg-gtgttaagagtcccaacttcggacagga 43117874  T
Q  104 catgatctgacaatatttttataa 127  Q
    ||||  |||||||| | |||||||    
T  43117875 catggcctgacaatgtgtttataa 43117898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 15590094 - 15590192
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||| || ||||||| ||||||||||||||||||||||||||| ||||||| ||| || ||| |||||||||   ||||||||||    
T  15590094 tttatgtccacgaaccaaacccaatagtgctggtcgtgagggggtgtgttaagagtctcacatcgaatatgagatggtctgacaatggatttataagtg 15590192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 17016065 - 17015971
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||| ||||||||||| || ||||   ||||||||||||||||||| | ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  17016065 aggtttccgctatcggaccacccaccatttatgtccacgaaccaagtccaatagtgttggtcgtga-gggttgtgttaagagtcccacatcggata 17015971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 17352598 - 17352500
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||| |||| || ||||||| ||| |||||||||||||||||||||| |||| || |||| |||||||| | ||||||||||    
T  17352598 gtttatgtccacgaaccaagcccaataatgctggtcgtaaggaggtgtgttaagagtcccacatc-gataagagatgacctgacaatgtgtttataagtg 17352500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 6919357 - 6919259
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||||||  ||| || |||| |||||||| | ||||| ||||    
T  6919357 tttatgtccacgaaccaagcccaatagtgctggtcgtgatggtgtgtgttaagagtcccacatcaaataagagatgacctgacaatgtgtttattagtg 6919259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 11896078 - 11895980
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||| |||||||| || ||||||| |||||||||||||||||||||||||||  |||| |||||||  |||| |||||||| | ||||||||||    
T  11896078 tttatgtccgcgaaccaaacccaatagtgatggtcgtgagggggtgtgttaagagtcttacattggataggtgatgacctgacaatgtatttataagtg 11895980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 11896346 - 11896249
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgag-ggggtgtgttaagagtcccacatcggatag 101  Q
    |||| ||||||||||| || ||||   ||||||||||||||||||| || ||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  11896346 aggtttccgctatcggaccacccaccatttatgtccacgaaccaagactgatagtgttggttgtgagaggggtgtgttaggagtcccacatcggatag 11896249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 17150423 - 17150298
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||  ||||||  | |||||||||| | ||||||||||||||||||||| | |||||||||||||     
T  17150423 aggtttccgctatcgggccacccaccatttatgtccagaaaccaataccaatagtgttgtttgtgagggggtgtgttaagagttcaacatcggataggag 17150324  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    ||| ||||| ||| | ||||||||||    
T  17150323 atggtctgaaaatgtgtttataagtg 17150298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 25258256 - 25258163
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcgga 98  Q
    |||| ||||||||||| || ||||   ||||||||||||||||||||| |||| || ||||| |||||||||||||||||||| ||||||||||    
T  25258256 aggtttccgctatcggaccacccacaatttatgtccacgaaccaagccaaataatgctggtcatgagggggtgtgttaagagttccacatcgga 25258163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 25322046 - 25321953
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcgga 98  Q
    |||| ||||||||||| || ||||   ||||||||||||||||||||| |||| || ||||| |||||||||||||||||||| ||||||||||    
T  25322046 aggtttccgctatcggaccacccacaatttatgtccacgaaccaagccaaataatgctggtcatgagggggtgtgttaagagttccacatcgga 25321953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 11896198 - 11896128
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||||||| |||||||||||| ||||| | || ||||||||||||||||||||||||||||||| ||||||    
T  11896198 tttatgtcaacgaaccaagcccaatagggatgatcgtgagggggtgtgttaagagtcccacatcagatagg 11896128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 18885383 - 18885480
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||| | |||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||  | ||| ||||||||| | ||||||||||    
T  18885383 tttatgtctatgaaccaagcccaatagtgctggtcgtgagagggtgtgttaagagtcccacatc-gataaaagatggtctgacaatgtgtttataagtg 18885480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 13700780 - 13700655
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtccca-catcggatagga 103  Q
    |||| ||||||||| |||| ||||   ||||||  |||||||||| || ||||||||||||||| ||  |||||||||||||||||| ||||||||||||    
T  13700780 aggtttccgctatcaggccacccaccatttatgatcacgaaccaaacccaatagtgttggtcgtaagaaggtgtgttaagagtcccaccatcggatagga 13700681  T
Q  104 catgatctgacaatatttttataagt 129  Q
     ||||  ||||||| | |||||||||    
T  13700680 gatgacttgacaatgtgtttataagt 13700655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 24531755 - 24531807
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaag 84  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  24531755 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaag 24531807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 26245926 - 26245989
Alignment:
Q  54 aatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaat 117  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||  |||||||    
T  26245926 aatagtgctggtcgtgaaggggtgtgttaagagtcccacatcggataggagatgacatgacaat 26245989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 32908880 - 32908783
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||| ||||||||| || ||||||| ||||||||||||| |||||||||||||| |||| | ||||   ||||||||||||| | ||||||||||    
T  32908880 tttatgtcaacgaaccaaacccaatagtgctggtcgtgagggg-tgtgttaagagtcctacattgaatagaggatgatctgacaatgtgtttataagtg 32908783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 11896492 - 11896419
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagt---gttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    ||||||||||| ||||||||| ||||||   | ||||||||| ||||||||||||||||||||||||| |||||    
T  11896492 tttatgtccacaaaccaagcccaatagtcctgatggtcgtgatggggtgtgttaagagtcccacatcgcatagg 11896419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 2063850 - 2063798
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||| ||||| ||||||||| | ||||||||||    
T  2063850 tgttaagagtcccacatcggatagaacatggtctgacaatgtgtttataagtg 2063798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 6415827 - 6415879
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||||||||||||||||| |||||||||||| ||||||  |||||||||    
T  6415827 gtttatgtccacgaaccaagcccaatagtgttggttgtgaggttgtgtgttaa 6415879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 6637792 - 6637856
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||| |||||||||||||||||||||||||| ||||| |||| |||||||| | | ||||||||    
T  6637792 cgtgatggggtgtgttaagagtcccacatcggttaggagatgacctgacaatgtgtctataagtg 6637856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 13296847 - 13296911
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||| |||||| |||||  || ||||||||| | ||||||||||    
T  13296847 cgtgagggggtgtgttaagagtcccgcatcggttaggagttggtctgacaatttgtttataagtg 13296911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 19522276 - 19522340
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  19522276 cgtgagggggtgtgttaagagtcccacatcggttaggagttggactgacaatttatttataagtg 19522340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 13701183 - 13701133
Alignment:
Q  80 ttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||| |||||| |||||| | ||||||||||    
T  13701183 ttaagagtcccacatcggataggaaatgatccgacaatgtgtttataagtg 13701133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 42490530 - 42490580
Alignment:
Q  33 ttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||||||||||||| | |||||| ||||||||||| |||||||||||    
T  42490530 ttatgtccacgaaccaagtcaaatagtattggtcgtgagagggtgtgttaa 42490580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 27133122 - 27133057
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    ||||||||||||||||||||||| |||||||| |||||  ||  |||||||| | |||||||||||    
T  27133122 cgtgagggggtgtgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtga 27133057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 11896610 - 11896542
Alignment:
Q  34 tatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    ||||||||||||||||| | ||| |||||||| ||||||| | ||||||| |||| |||||| ||||||    
T  11896610 tatgtccacgaaccaagtccaattgtgttggttgtgagggtgcgtgttaaaagtctcacatcagatagg 11896542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 29909616 - 29909552
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||| ||||||| |||||  ||  |||||||| | ||||||||||    
T  29909616 cgtgagggggtgtgttaagagtccgacatcggttaggagttggcctgacaatttatttataagtg 29909552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 41667110 - 41667058
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||||  |||||||| | ||||||||||    
T  41667110 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 41667058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 38976915 - 38976876
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaat 117  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  38976915 tgttaagagtcccacatcagataggacatgacctgacaat 38976876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 3859426 - 3859372
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    ||||||||||||||| ||||||||| |||||| |||| ||| | |||||||||||    
T  3859426 gtgttaagagtcccatatcggatagaacatgacctgataatgtgtttataagtga 3859372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 8098506 - 8098568
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataag 128  Q
    |||||||||| ||||||||||||||||||||| |||||  ||  |||||||| | ||||||||    
T  8098506 cgtgagggggggtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataag 8098568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 19705869 - 19705922
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||||   |||||||| | ||||||||||    
T  19705869 gtgttaagagtcccacatcgggtaggacatagcctgacaatgtgtttataagtg 19705922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 24346854 - 24346802
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||| ||| ||||||  |||||||| | ||||||||||    
T  24346854 tgttaagagtcccacatcgaataagacatggcctgacaatgtatttataagtg 24346802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 37656582 - 37656634
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||| |||||||||  ||| ||||||||| | ||||||||||    
T  37656582 tgttaagagtcccacgtcggataggtaatggtctgacaatgtgtttataagtg 37656634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 20327804 - 20327679
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   |||||||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  20327804 aggtttccgctatcgggccacccaccatttatgtccaggaaccaagcccaatagtgttggtcgtgagcgggtgtgttaagaatcccacatcggataggac 20327705  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  20327704 atggcctgacaatgtatttataagtg 20327679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 4155453 - 4155578
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||  ||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||||||||||| |||||||    
T  4155453 aggtttccgctatcgggccacccaccgtttatgtcgacgaaccaagcccaatagtgctggtcgtgagagggtgtgttaagagtcccacatcgcataggac 4155552  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    | |  |||||||| | ||||||||||    
T  4155553 aaggcctgacaatgtgtttataagtg 4155578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 34992762 - 34992846
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaa 116  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  34992762 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggataggtgatggtctgacaa 34992846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 31317370 - 31317485
Alignment:
Q  15 tatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgac 114  Q
    ||||||||| ||||   |||||||||||||||||| |  ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  31317370 tatcgggccacccaccatttatgtccacgaaccaaactcaatagtgctggtcgtgagggggtgtgttaagagtcctacatcggataggacatgacatgac 31317469  T
Q  115 aatatttttataagtg 130  Q
    ||| | ||||||||||    
T  31317470 aatgtgtttataagtg 31317485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 16239748 - 16239846
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||  |||||||||||||  |||||||||| ||||||||||    
T  16239748 tttatgtccacgaaccaagctcaatagtgatggtcgtgagggggtgtgttaagagtcacacgacggataggacatggcctgacaatatgtttataagtg 16239846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 35038357 - 35038259
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||  |||  |||||||| | ||||||||||    
T  35038357 tttatgtccacgaaccaagcccaatagtactggtcgtgagggggtgtgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 35038259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 19954380 - 19954284
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    ||||||||||||||||||||| ||||||  |||||||||||||| |||||||||||||||||||  |||||| ||| ||||||||||| |||||||||    
T  19954380 tttatgtccacgaaccaagcccaatagtactggtcgtgaggggg-gtgttaagagtcccacatcttataggagatggtctgacaatatgtttataagt 19954284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 20303254 - 20303129
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||||||||| || ||||   ||||||||||||||||||| | || |||| |||||||||| ||||||||||||| |||||||||||||| |||    
T  20303254 aggtttccgctatcggtccacccaccatttatgtccacgaaccaagtccaacagtgctggtcgtgagcgggtgtgttaagaatcccacatcggatatgac 20303155  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  20303154 atggcctgacaatgtatttataagtg 20303129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 39683450 - 39683336
Alignment:
Q  13 gctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctg 112  Q
    ||||||||||| ||||   ||||||||||||||||||||| |||| || ||||||||||||  ||||||||||||||||||||||||||   |||| |||    
T  39683450 gctatcgggccacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagggactgtgttaagagtcccacatcggatagatgatgacctg 39683351  T
Q  113 acaatatttttataa 127  Q
    ||||| | |||||||    
T  39683350 acaatgtgtttataa 39683336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 52724169 - 52724054
Alignment:
Q  12 cgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatct 111  Q
    |||||||||||| ||||   |||||||||| ||||||| |   ||||||||| |||||| | |||||||||||||||||||||||||||| | || ||||    
T  52724169 cgctatcgggccacccaccatttatgtccatgaaccaaactcgatagtgttgatcgtgaagaggtgtgttaagagtcccacatcggatagaagataatct 52724070  T
Q  112 gacaatatttttataa 127  Q
     ||||||| |||||||    
T  52724069 aacaatatgtttataa 52724054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 29215751 - 29215654
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| ||||  ||||| | ||| |  |||||||| ||||||||||    
T  29215751 tttatgtccacgaaccaaacccaatagtgttggtcgtga-ggggtgtgttaagagtccaacattagatagaagatggtacgacaatatgtttataagtg 29215654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 13574848 - 13574781
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcgga 98  Q
    ||||||||||||||||||||| ||||||| | |||||||||| ||||||| |||||||||||||||||    
T  13574848 tttatgtccacgaaccaagcccaatagtgctagtcgtgagggagtgtgttaaagagtcccacatcgga 13574781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 9273150 - 9273214
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||||||||| |||||  || ||||||||| | ||||||||||    
T  9273150 cgtgagggggtgtgttaagagtcccacatcggttaggaattggtctgacaatttgtttataagtg 9273214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 22729649 - 22729717
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    ||||||||||||||||||||| |||| || | |||||||  |||||||||||||| |||||||||||||    
T  22729649 tttatgtccacgaaccaagcccaataatgctagtcgtgaacgggtgtgttaagaggcccacatcggata 22729717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 38791567 - 38791514
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    |||||||||||||||||||||||||| ||| ||||||||| | |||||||||||    
T  38791567 tgttaagagtcccacatcggataggagatggtctgacaatgtatttataagtga 38791514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 39269230 - 39269275
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtg 77  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||    
T  39269230 tttatgtccacgaaccaaccctaatagtgttggtcgtgaggtggtg 39269275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 51226968 - 51226918
Alignment:
Q  38 tccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtc 88  Q
    ||||||||||||||||| ||||| || ||||||||| ||||||||||||||    
T  51226968 tccacgaaccaagcctagtagtgctgatcgtgagggagtgtgttaagagtc 51226918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 54368643 - 54368741
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||| ||| |||||| |||  || |||| |||| ||||||| |||||||||| ||||||||||| | |||  |||||||| | ||||||||||    
T  54368643 tttatgtccaggaatcaagcccaattttgctggttgtgacggggtgtattaagagtccaacatcggatagaagatggcctgacaatgtatttataagtg 54368741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 2123774 - 2123827
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    ||||||||||| ||| |||||||||||||||||||| ||| | |||||||||||    
T  2123774 tgttaagagtctcacgtcggataggacatgatctgataatgtgtttataagtga 2123827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 16239557 - 16239610
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||| ||||||||||||||||||  |||||||| | ||||||||||    
T  16239557 gtgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtg 16239610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 16927066 - 16927014
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||| |||||  |||||||| | ||||||||||    
T  16927066 tgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtg 16927014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 17638363 - 17638427
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||||||||| ||| |  ||  |||||||| | ||||||||||    
T  17638363 cgtgagggggtgtgttaagagtcccacatcggttagaagctggcctgacaatttgtttataagtg 17638427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 34992517 - 34992569
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||  ||| ||||||||| | ||||||||||    
T  34992517 tgttaagagtcccacatcggataggtgatggtctgacaatgtgtttataagtg 34992569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 97
Target Start/End: Complemental strand, 1722971 - 1722940
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcgg 97  Q
    ||||||||||||||||||||||||||||||||    
T  1722971 cgtgagggggtgtgttaagagtcccacatcgg 1722940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 20303013 - 20303052
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaat 117  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  20303013 tgttaagagtcccacatcggataggacatggcctgacaat 20303052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 26753450 - 26753364
Alignment:
Q  31 gtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaat 117  Q
    |||||||| |||||||||| || ||| ||| || | |||||||||||||||||||||  ||||||| | || ||||||  |||||||    
T  26753450 gtttatgttcacgaaccaaacccaattgtgctgcttgtgagggggtgtgttaagagtatcacatcgcacagaacatgacatgacaat 26753364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 39620291 - 39620345
Alignment:
Q  76 tgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||| |||||||||||||  |||| |||||||| | ||||||||||    
T  39620291 tgtgttaagagtctcacatcggataggtgatgacctgacaatgtgtttataagtg 39620345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 7697514 - 7697473
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatat 119  Q
    |||||||||||||||||||||||||| |||| | ||||||||    
T  7697514 tgttaagagtcccacatcggataggagatgaccagacaatat 7697473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 97
Target Start/End: Original strand, 8018925 - 8018954
Alignment:
Q  68 tgagggggtgtgttaagagtcccacatcgg 97  Q
    ||||||||||||||||||||||||||||||    
T  8018925 tgagggggtgtgttaagagtcccacatcgg 8018954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 21808875 - 21808834
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgaggg 73  Q
    |||||| |||||||||||||| ||||||| ||||||||||||    
T  21808875 tttatgcccacgaaccaagcccaatagtgctggtcgtgaggg 21808834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 23691321 - 23691284
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggatagga 103  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  23691321 cgtgagggtgtgtgttaagagtcccacatcggttagga 23691284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 23708121 - 23708084
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggatagga 103  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  23708121 cgtgagggtgtgtgttaagagtcccacatcggttagga 23708084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 23726577 - 23726540
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggatagga 103  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  23726577 cgtgagggtgtgtgttaagagtcccacatcggttagga 23726540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 23745033 - 23744996
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggatagga 103  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  23745033 cgtgagggtgtgtgttaagagtcccacatcggttagga 23744996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 24063558 - 24063521
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggatagga 103  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  24063558 cgtgagggtgtgtgttaagagtcccacatcggttagga 24063521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 39269297 - 39269350
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||| ||| || ||||| ||||||||| | ||||||||||    
T  39269297 gtgttaagagtcccacattggagagcacatggtctgacaatgtgtttataagtg 39269350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 45828196 - 45828233
Alignment:
Q  62 tggtcgtgagggggtgtgtt-aagagtcccacatcgga 98  Q
    |||||||||||||||||||| |||||||||||||||||    
T  45828196 tggtcgtgagggggtgtgttaaagagtcccacatcgga 45828233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 20303313 - 20303277
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgt 68  Q
    ||||||||||||||||||| | |||||||||||||||    
T  20303313 tttatgtccacgaaccaagtccaatagtgttggtcgt 20303277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 20327564 - 20327592
Alignment:
Q  79 gttaagagtcccacatcggataggacatg 107  Q
    |||||||||||||||||||||||||||||    
T  20327564 gttaagagtcccacatcggataggacatg 20327592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 22729067 - 22729119
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||| ||||||||||||||||||||| ||| ||||||||| | |||| |||||    
T  22729067 tgttcagagtcccacatcggataggagatggtctgacaatgtgtttacaagtg 22729119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22775593 - 22775493
Alignment:
Q  1 tattaggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtg-ttaagagtcccacatcggat 99  Q
    |||||||| || ||||||||||| ||||   ||||| |||| | ||||| || ||||||||||| | ||||| |||||| ||| ||||||||||| ||||    
T  22775593 tattaggtttctgctatcgggccacccaccatttatatccatgcaccaatcccaatagtgttgggcatgaggtggtgtgtttaggagtcccacattggat 22775494  T
Q  100 a 100  Q
    |    
T  22775493 a 22775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 97
Target Start/End: Complemental strand, 28087130 - 28087102
Alignment:
Q  69 gagggggtgtgttaagagtcccacatcgg 97  Q
    |||||||||||||||||||||||||||||    
T  28087130 gagggggtgtgttaagagtcccacatcgg 28087102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 35038545 - 35038493
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||  |||  |||||||| | ||||||||||    
T  35038545 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 35038493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 52994748 - 52994796
Alignment:
Q  81 taagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    |||| ||| ||||||| |||||||||||||||||||| | |||||||||    
T  52994748 taagtgtctcacatcgaataggacatgatctgacaatgtgtttataagt 52994796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 54567859 - 54567911
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||| | |||||||||||||||  |||||||| | ||||||||||    
T  54567859 tgttaagagtcctatatcggataggacatggcctgacaatgtgtttataagtg 54567911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 2072 - 2170
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||  |||||||| | ||||||||||    
T  2072 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 2170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 1883 - 1935
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| |||||||| ||||||||| | ||||||||||    
T  1883 tgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtg 1935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 11232357 - 11232259
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||  |||||||| | ||||||||||    
T  11232357 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtg 11232259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 18004284 - 18004161
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| || |||||    
T  18004284 aggtttccgctatcgggccacccaccatttatgtccacgaaccaagcctaatagtgctggtcgtgagggg--gtgttaagagtcccacatcagacaggac 18004187  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||||| ||||||||||    
T  18004186 atggcctgacaatatgtttataagtg 18004161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 39052727 - 39052602
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggac 104  Q
    |||| ||||||||| |||| ||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||      
T  39052727 aggtttccgctatccggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgttaagagtcccacatcagataggtg 39052628  T
Q  105 atgatctgacaatatttttataagtg 130  Q
    |||  |||||||| | ||||||||||    
T  39052627 atggcctgacaatgtgtttataagtg 39052602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 39052884 - 39052787
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||| ||||||||| |||| ||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39052884 aggtttccgctatccggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 39052787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 35682975 - 35682846
Alignment:
Q  1 tattaggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||||||| |||||||||||||| ||||   ||||||||||||||||||||  ||||||| |||||||||||||  ||||||||||| |||||||||| |    
T  35682975 tattaggtttccgctatcgggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgaggggtggtgttaagagttccacatcggaca 35682876  T
Q  101 ggacatgatctgacaatatttttataagtg 130  Q
    |||||||  |||||||| | ||||||||||    
T  35682875 ggacatggcctgacaatgtgtttataagtg 35682846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 3157199 - 3157103
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatag 101  Q
    |||| |||||||||||| | ||||   ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  3157199 aggtttccgctatcgggacacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtctcacatcggatag 3157103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 8084283 - 8084381
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| | | ||||||  || ||||| | ||||||||||    
T  8084283 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcgaacaagacatggcctaacaatgtatttataagtg 8084381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 39960113 - 39960210
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||| |||  |||| ||| | ||||||||||    
T  39960113 tttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg-gtgttaagagtcccacatcggataggagatggcctgaaaatttgtttataagtg 39960210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 20301390 - 20301485
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||| ||||||||||| || ||||   |||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  20301390 aggtttccgctatcggaccacccaccatttatgtctacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtaccacatcggata 20301485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 21088022 - 21088117
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    |||| ||||||||||| || ||||   |||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  21088022 aggtttccgctatcggaccacccaccatttatgtctacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtaccacatcggata 21088117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 12688228 - 12688326
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||| ||||| ||||||| ||||| |||||||||||| |||||||||||||| |||||| | |||| |||||||| | ||||||||||    
T  12688228 tttatgtccacgaactaagcccaatagtgatggtcatgagggggtgtgataagagtcccacattggatagaagatgacctgacaatgtgtttataagtg 12688326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 20094723 - 20094629
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttata 126  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||| |||| | |||  |||||||| | ||||||    
T  20094723 tttatgtccacgaaccaagcccaatagtgctggtcgtgagggggcgtgttaagagtcccacatcgaatagaagatggcctgacaatgtgtttata 20094629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 3157487 - 3157417
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||| ||||| |||||||    
T  3157487 tttatgtccacgaaccaagcccaatagtgctggtcgtgagtgggtgtgttaagagtctcacatgggatagg 3157417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 5932134 - 5932014
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgat 109  Q
    |||| ||||||||| ||||   |||||||| || ||||||||  ||||||| |||||||||  ||||||||||||||||||||||| ||||| |||||      
T  5932134 tccgttatcgggccacccaccatttatgtcgacaaaccaagcgcaatagtgctggtcgtgaaagggtgtgttaagagtcccacatcagatagtacatggc 5932035  T
Q  110 ctgacaatatttttataagtg 130  Q
    |||||||| | ||||||||||    
T  5932034 ctgacaatgtgtttataagtg 5932014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 422408 - 422282
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgag-ggggtgtgttaagagtcccacatcggatagga 103  Q
    |||| |||||| ||||||| ||||   ||| |||||||||||||||   |||| |||||||| |||| |||||||||||| |||||||||||||||||||    
T  422408 aggtttccgctctcgggccacccaccatttttgtccacgaaccaagttcaataatgttggtcatgagaggggtgtgttaaaagtcccacatcggatagga 422309  T
Q  104 catgatctgacaatatttttataagtg 130  Q
     ||| ||||||||| | |||| |||||    
T  422308 gatggtctgacaatgtgtttaaaagtg 422282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 28213266 - 28213168
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||| |||||| ||||||||| ||| ||||| ||||||||||||||||| |||  |||| || ||| ||||||||| | ||||||||||    
T  28213266 tttatgtccacgaatcaagcccaatagtgttagtcatgaggtggtgtgttaagagtcccgcataagatatgagatggtctgacaatgtgtttataagtg 28213168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 41790787 - 41790873
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtccca 91  Q
    |||| |||||||||| ||| ||||   |||||||||| |||||||||| || |||| ||||||||||||||||||||||||||||||    
T  41790787 aggtttccgctatcgagccacccaccatttatgtccatgaaccaagcccaagagtgctggtcgtgagggggtgtgttaagagtccca 41790873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 5675897 - 5675800
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    ||||||||||||||||||| | ||||||| |||||| |||| ||||||| |||||||| |||||||||||   ||| ||||||||| | |||||||||    
T  5675897 tttatgtccacgaaccaagtccaatagtgctggtcgagaggaggtgtgtaaagagtcctacatcggatagatgatggtctgacaatgtgtttataagt 5675800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 31079744 - 31079660
Alignment:
Q  14 ctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcgg 97  Q
    ||||||||||  ||||  ||||||||||||||||||||| ||||| | ||||||||||| |||||||| ||||||||||||||||    
T  31079744 ctatcgggccatccatcatttatgtccacgaaccaagcccaatagggatggtcgtgaggaggtgtgttaaagagtcccacatcgg 31079660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 37868018 - 37867945
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||| ||||| ||||   ||||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  37868018 tccgctattgggccacccaccatttatgtccacgaaccaaggccaatagtgttggtcgtgagggtgtgtgttaa 37867945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 42049636 - 42049563
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    ||||||||  |||| |||| | ||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  42049636 tccgctattaggccacccactatttatgtccacgaaccaagtccaatagtgttgctcgtgagggggtgtgttaa 42049563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 5589903 - 5589835
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggata 100  Q
    ||||||||||||||||||||| |||| || | |||||||  |||||||||||||| |||||||||||||    
T  5589903 tttatgtccacgaaccaagcccaataatgctagtcgtgaacgggtgtgttaagaggcccacatcggata 5589835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 10615101 - 10615034
Alignment:
Q  34 tatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcggata 100  Q
    ||||| ||||||||||| | |||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  10615101 tatgttcacgaaccaagtccaatagtgttggttgtgagggtgtgtgttaaagagtcccacatcggata 10615034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 37868236 - 37868185
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    ||||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  37868236 tttatgtccacgagccaagcccaatagtgttggtcgtgagggtgtgtgttaa 37868185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 7669575 - 7669636
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacat 94  Q
    |||||||||||||||||||| | |||||| |||||||||||| ||||||||||||| ||||||    
T  7669575 tttatgtccacgaaccaagc-tcatagtgctggtcgtgagggtgtgtgttaagagttccacat 7669636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 31197743 - 31197838
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||| ||||||||||| || ||||   ||||||||||||||||||||  ||||||| || | ||||||||  ||||||||||||||||||| ||||||    
T  31197743 aggtttccgctatcggaccacccaccatttatgtccacgaaccaagctcaatagtgctgattgtgagggg--gtgttaagagtcccacatcagatagg 31197838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 11232546 - 11232494
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| |||||||| ||||||||| | ||||||||||    
T  11232546 tgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtg 11232494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 12317013 - 12317065
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| |||||||| ||||||||| | ||||||||||    
T  12317013 tgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtg 12317065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 17477020 - 17477084
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  17477020 cgtgagggggtgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 17477084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 19256715 - 19256651
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  19256715 cgtgagggggtgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtg 19256651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 15042790 - 15042735
Alignment:
Q  75 gtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||| ||||||  |||||||| | ||||||||||    
T  15042790 gtgtgttaagagtcccacatcggatacgacatggcctgacaatgtgtttataagtg 15042735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 39743484 - 39743547
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    |||||||||||||||||||||||||||||||| |||||  ||  |||||||| | |||||||||    
T  39743484 cgtgagggggtgtgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagt 39743547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 28069476 - 28069422
Alignment:
Q  76 tgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||| ||||||  |||||||| | ||||||||||    
T  28069476 tgtgttaagagtcccacatcggatatgacatggcctgacaatgtatttataagtg 28069422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 8849349 - 8849389
Alignment:
Q  43 gaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  8849349 gaaccaaacccaatagtgttggtcgtgagggggtgtgttaa 8849389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 10449967 - 10450019
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||| ||||||||||||||||||  |||||||| | ||||||||||    
T  10449967 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtg 10450019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 10615523 - 10615615
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcg 96  Q
    |||| |||||||||||| | || | | ||||| ||||||||||||| | ||||||| | |||||||||| ||||||| |||||||| ||||||    
T  10615523 aggtttccgctatcgggtcaccaactatttatctccacgaaccaagtccaatagtgctagtcgtgagggtgtgtgttaaagagtcctacatcg 10615615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 19472379 - 19472315
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||| ||||||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  19472379 cgtgagagggtgtgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtg 19472315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 19543304 - 19543240
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||| ||||||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  19543304 cgtgagagggtgtgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtg 19543240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 19589392 - 19589456
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||| ||||||||||||||||||||||||| |||||  ||  |||||||| | ||||||||||    
T  19589392 cgtgagagggtgtgttaagagtcccacatcggttaggaattggcctgacaatttgtttataagtg 19589456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 24532538 - 24532486
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||| |||  |||||||| | ||||||||||    
T  24532538 tgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtg 24532486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 25325613 - 25325665
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||||||  || ||||| | ||||||||||    
T  25325613 tgttaagagtcccacatcggataggacatggcctaacaatgtgtttataagtg 25325665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 34653116 - 34653171
Alignment:
Q  76 tgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtga 131  Q
    ||||||||||||| |||||||| |||||  |||||||||||| | |||||||||||    
T  34653116 tgtgttaagagtctcacatcggttaggagttgatctgacaatttgtttataagtga 34653171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 97
Target Start/End: Original strand, 34842867 - 34842898
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcgg 97  Q
    ||||||||||||||||||||||||||||||||    
T  34842867 cgtgagggggtgtgttaagagtcccacatcgg 34842898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 97
Target Start/End: Original strand, 34843039 - 34843070
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcgg 97  Q
    ||||||||||||||||||||||||||||||||    
T  34843039 cgtgagggggtgtgttaagagtcccacatcgg 34843070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 34843077 - 34843136
Alignment:
Q  71 gggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||||||| |||||  || ||| ||||| | ||||||||||    
T  34843077 gggggtgtgttaagagtcccacatcggttaggagttggtctaacaatttgtttataagtg 34843136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 37868533 - 37868443
Alignment:
Q  10 tccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatcggata 100  Q
    |||||||| ||||| ||||   ||||||| ||||||||||||| |||| || |||||||||||||| ||||| |||||||  ||||||||||    
T  37868533 tccgctattgggccacccaccatttatgtacacgaaccaagcccaatattgctggtcgtgaggggg-gtgttaaagagtcgaacatcggata 37868443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8716240 - 8716322
Alignment:
Q  1 tattaggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||| |||||||||||| | || |   ||||||||||||||| || ||||||| || ||||| ||| ||||||||||||    
T  8716240 tattaggtttccgctatcgggtcaccgaccatttatgtccacgaacaaaacctaatactgctggtcatgacggggtgtgttaa 8716322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 5932294 - 5932249
Alignment:
Q  85 agtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||||| ||| ||||| | ||||||||||    
T  5932294 agtcccacatcggataggacatggtctaacaatgtgtttataagtg 5932249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 12547065 - 12547118
Alignment:
Q  77 gtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| |||||  || ||||||||| | ||||||||||    
T  12547065 gtgttaagagtcccacatcggttaggagttggtctgacaatttatttataagtg 12547118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 15797171 - 15797134
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtg 69  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  15797171 tttatgtccacgaaccaagcccaatagtgctggtcgtg 15797134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 5590485 - 5590433
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||| ||||||||||||||||||||| ||| ||||||||| | |||| |||||    
T  5590485 tgttcagagtcccacatcggataggagatggtctgacaatgtgtttacaagtg 5590433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 30201707 - 30201619
Alignment:
Q  13 gctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa-gagtcccacatcggata 100  Q
    ||||||||| | ||||  ||||||| |||| |||||| || || |||| ||||| |||| || |||||||| |||||||||||||||||    
T  30201707 gctatcgggtcacccaccgtttatgaccacaaaccaaacccaacagtgatggtcatgagaggatgtgttaaagagtcccacatcggata 30201619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 39053046 - 39052994
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||||||  |||  |||||||| | ||||||||||    
T  39053046 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtg 39052994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 81997 - 82082
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaat 117  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| || | ||||||  ||||||||    
T  81997 tttatgtccatgaaccaagcccaatagtgctggtcgtgagggggtgtgttaagagtcccacatcagacatgacatggcctgacaat 82082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 81809 - 81861
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    ||||||||||||||||||||| || |||||  |||||||||| ||||||||||    
T  81809 tgttaagagtcccacatcggacagaacatggcctgacaatatgtttataagtg 81861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 14543 - 14631
Alignment:
Q  14 ctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||||||| | |||| | |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||  |||||| |||||    
T  14543 ctatcgggtcacccactatttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgtgttaagagtcatacatcgaatagg 14631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 10895 - 10965
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||  |||||| |||||    
T  10895 tttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgtgttaagagtcatacatcgaatagg 10965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 13254 - 13324
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||  |||||| |||||    
T  13254 tttatgtccatgaaccaagcccaatagtgttggtcgtgatggggtgtgttaagagtcatacatcgaatagg 13324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 5709 - 5633
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgtt 81  Q
    |||| ||||||||||| || ||||   ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  5709 aggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 5870 - 5819
Alignment:
Q  79 gttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||||||||| |||||  ||||||||| | ||||||||||    
T  5870 gttaagagtcccacatcggataagacatagtctgacaatgtgtttataagtg 5819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 12803 - 12872
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    ||||||| ||||||||||||  ||||||| ||| ||||||||||||||||||||| ||||||||| |||||    
T  12803 tttatgttcacgaaccaagctcaatagtgctgg-cgtgagggggtgtgttaagagccccacatcgaatagg 12872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 14432 - 14557
Alignment:
Q  5 aggtctccgctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgt--tggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||| |||||||||||||| || |   |||||||||||||| |||||| ||||  ||  |||||||| ||||| ||  ||||||||||||||||||||||    
T  14432 aggtttccgctatcgggccacctaccatttatgtccacgaatcaagcccaatatagtactggtcgtgggggggcgt--taagagtcccacatcggatagg 14529  T
Q  103 acatgatctgacaatatttttataagtg 130  Q
      ||| ||||||||| | ||||||||||    
T  14530 tgatggtctgacaatgtgtttataagtg 14557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 5810 - 5910
Alignment:
Q  31 gtttatgtccacgaaccaagcctaa-tagtgttggtcgtgagggggtgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagt 129  Q
    ||||||| |||||||||||||| || || || ||||||||||||| |||||||| ||| ||||||||||||| | |||   ||||||||| |||||||||    
T  5810 gtttatgcccacgaaccaagcccaaataatgctggtcgtgagggg-tgtgttaacagttccacatcggatagaagatggcatgacaatatgtttataagt 5908  T
Q  130 ga 131  Q
    ||    
T  5909 ga 5910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 51411 - 51480
Alignment:
Q  14 ctatcgggcctcccattgtttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaa 83  Q
    |||||||||| || ||  ||||||| ||||||||||||| |||||||||||| |||||||| ||||||||    
T  51411 ctatcgggccacctatcatttatgttcacgaaccaagcccaatagtgttggttgtgaggggatgtgttaa 51480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 121499 - 121544
Alignment:
Q  57 agtgttggtcgtgagggggtgtgttaagagtcccacatcggatagg 102  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||||    
T  121499 agtgctggacgtgagggggtgtgttaagagtcctacatcggatagg 121544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 67406 - 67462
Alignment:
Q  32 tttatgtccacgaaccaagcctaatagtgttggtcgtgagggggtgtgttaagagtc 88  Q
    ||||||||||||||||||||  |||||||||||  |||| || ||||||||||||||    
T  67406 tttatgtccacgaaccaagctcaatagtgttggctgtgacggtgtgtgttaagagtc 67462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 97
Target Start/End: Original strand, 56648 - 56679
Alignment:
Q  66 cgtgagggggtgtgttaagagtcccacatcgg 97  Q
    ||||||||||||||||||||||||||||||||    
T  56648 cgtgagggggtgtgttaagagtcccacatcgg 56679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 56426 - 56475
Alignment:
Q  78 tgttaagagtcccacatcggataggacatgatctgacaatatttttataa 127  Q
    |||||||||||||||||||| |||||  |||||||||||| | |||||||    
T  56426 tgttaagagtcccacatcggttaggagttgatctgacaatttgtttataa 56475  T

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Target: scaffold0005; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 288770 - 288726
Alignment:
Q  82 aagagtcccacatcggataggacatgatctgacaatatttttata 126  Q
    |||||||||||||||||||||| ||| ||||||||| | ||||||    
T  288770 aagagtcccacatcggataggagatggtctgacaatgtatttata 288726  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 89672 - 89618
Alignment:
Q  76 tgtgttaagagtcccacatcggataggacatgatctgacaatatttttataagtg 130  Q
    |||||||||||||||  |||||||| || ||||||||| ||||| ||||||||||    
T  89672 tgtgttaagagtccccgatcggataagatatgatctgataatatgtttataagtg 89618  T

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