View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9893_low_47 (Length: 251)
Name: NF9893_low_47
Description: NF9893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9893_low_47 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 4558216 - 4557981
Alignment:
| Q |
1 |
tgttgttgttcttgttgtaatttgttcatccttcataaaaaagaataatatacaaaaaacatttattacgtgttacagatacttgagtgacggccttgca |
100 |
Q |
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| T |
4558216 |
tgttgttgttcttgttgtaatttgttcatccttcataaaaaagaataatatacaaaagacatttatgacgtgttacagatacttgagtgacggccttgca |
4558117 |
T |
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| Q |
101 |
acaaccaaaagtgatgtctatgcatttggtgttgtcctttttgagactataaccggaaaggaggccattattcgaacagaaggcatgatgacaaaaaatc |
200 |
Q |
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| T |
4558116 |
acaaccaaaagtgatgtctatgcatttggtgttgtcctttttgagactataactggaaaggaggccattattcgaacagaaggcatgatgacaaaaaatc |
4558017 |
T |
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| Q |
201 |
ctgaaagacgatcactcgcatcaatagtaagttttg |
236 |
Q |
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|||||||||||||||||||||| ||||||||||||| |
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| T |
4558016 |
ctgaaagacgatcactcgcatcgatagtaagttttg |
4557981 |
T |
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