View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9893_low_69 (Length: 218)
Name: NF9893_low_69
Description: NF9893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9893_low_69 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 7801588 - 7801371
Alignment:
| Q |
1 |
agttctgtgttagatactacaaaacttgttatgaaaatctcataaccacaagaaaacaacatctgaagccatgatggttattaaatagtaatatccagtc |
100 |
Q |
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| T |
7801588 |
agttctgtgttagatactacaaaacttgttatgaaaatctcataaccacaagaaaacaacatctgaagccatgatggttattaaatagtaatatccagtc |
7801489 |
T |
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| Q |
101 |
tatacataatcaaacaaagctatgtgttacatactacaaaacttgttatggtttacttaaacacacattctactctgctaatacaaacaaggattcacaa |
200 |
Q |
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| T |
7801488 |
tatacataatcaaacaaagctatgtgttacatactacaaaacttgttatggtttacttaaacacacattctactctgctaatacaaacaaggattcacaa |
7801389 |
T |
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| Q |
201 |
attcatgttgttcaatgg |
218 |
Q |
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|||||||||||||||||| |
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| T |
7801388 |
attcatgttgttcaatgg |
7801371 |
T |
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