View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9893_low_70 (Length: 218)
Name: NF9893_low_70
Description: NF9893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9893_low_70 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 11094452 - 11094250
Alignment:
| Q |
1 |
aattcaaaggaattgtaatcataaatgtagaaaaggtaaacaaaagtaaaatccaattacaagttccatagtcaaatagttcatatttaataaacagaag |
100 |
Q |
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| T |
11094452 |
aattcaaaggaattgtaatcataaatgtagaaaaggtaaacaaaagtaaaatccaattacaagttccatagtcaaatagttcatatttaataaacagaag |
11094353 |
T |
|
| Q |
101 |
acaaaaaatcatcttacaaataatgtgatcatatcatgaatgaaaaagactaagatagatggtcctagattttcattttttatcatagtcaactggtata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11094352 |
acaaaaaatcatcttacaaataatgtgatcatatcatgaatgaaaaagactaagatagatggtcctagattttcattttttatcatagtcaactggtata |
11094253 |
T |
|
| Q |
201 |
tat |
203 |
Q |
| |
|
||| |
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|
| T |
11094252 |
tat |
11094250 |
T |
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