View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9894_low_15 (Length: 266)

Name: NF9894_low_15
Description: NF9894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9894_low_15
NF9894_low_15
[»] chr4 (32 HSPs)
chr4 (1-190)||(12570107-12570296)
chr4 (51-188)||(23843613-23843751)
chr4 (51-188)||(44675767-44675905)
chr4 (12-186)||(13569612-13569783)
chr4 (58-187)||(15125001-15125130)
chr4 (69-188)||(15093926-15094046)
chr4 (48-188)||(16356799-16356938)
chr4 (48-188)||(16487924-16488064)
chr4 (48-188)||(16348511-16348650)
chr4 (51-153)||(5338862-5338964)
chr4 (51-153)||(15353188-15353290)
chr4 (51-153)||(36133844-36133945)
chr4 (50-188)||(15121649-15121786)
chr4 (50-153)||(17810394-17810496)
chr4 (50-153)||(25555638-25555741)
chr4 (50-153)||(11250442-11250545)
chr4 (50-153)||(14757304-14757406)
chr4 (50-153)||(16351730-16351833)
chr4 (48-109)||(10712639-10712700)
chr4 (48-109)||(10926409-10926470)
chr4 (48-109)||(12487494-12487555)
chr4 (48-105)||(14954433-14954490)
chr4 (48-105)||(25689653-25689710)
chr4 (48-109)||(43256339-43256400)
chr4 (53-153)||(43256043-43256141)
chr4 (50-153)||(27534148-27534250)
chr4 (48-87)||(13812966-13813005)
chr4 (48-87)||(20157407-20157446)
chr4 (50-87)||(22634369-22634406)
chr4 (50-86)||(4561282-4561318)
chr4 (50-86)||(5756886-5756922)
chr4 (50-86)||(9556652-9556688)
[»] chr8 (35 HSPs)
chr8 (1-190)||(24755807-24755996)
chr8 (1-190)||(16184813-16185003)
chr8 (1-174)||(377364-377537)
chr8 (2-173)||(19259443-19259614)
chr8 (51-188)||(19983228-19983366)
chr8 (51-188)||(19899230-19899368)
chr8 (1-188)||(21168567-21168755)
chr8 (48-174)||(20465899-20466025)
chr8 (48-188)||(30643137-30643278)
chr8 (1-188)||(21161904-21162082)
chr8 (2-187)||(17353784-17353966)
chr8 (48-188)||(17926553-17926692)
chr8 (94-188)||(23776681-23776775)
chr8 (48-188)||(15602863-15603003)
chr8 (48-188)||(16410101-16410240)
chr8 (48-188)||(15611315-15611455)
chr8 (117-188)||(19976647-19976718)
chr8 (106-188)||(21395828-21395910)
chr8 (106-188)||(21790321-21790403)
chr8 (50-153)||(20856306-20856409)
chr8 (106-188)||(21389298-21389380)
chr8 (48-134)||(22010579-22010664)
chr8 (48-109)||(21828276-21828337)
chr8 (48-109)||(14398035-14398096)
chr8 (48-153)||(16861208-16861312)
chr8 (48-105)||(18862911-18862968)
chr8 (48-109)||(21410733-21410794)
chr8 (48-109)||(21805225-21805286)
chr8 (51-97)||(39094861-39094907)
chr8 (50-86)||(19278231-19278267)
chr8 (50-86)||(21972533-21972569)
chr8 (50-86)||(21976618-21976654)
chr8 (50-86)||(22111973-22112009)
chr8 (121-153)||(39094823-39094855)
chr8 (50-86)||(43251935-43251971)
[»] chr6 (45 HSPs)
chr6 (1-189)||(15894274-15894462)
chr6 (1-188)||(21739868-21740055)
chr6 (48-188)||(18907241-18907381)
chr6 (50-188)||(25642029-25642168)
chr6 (48-188)||(19863112-19863253)
chr6 (48-188)||(19873254-19873395)
chr6 (50-188)||(22438936-22439075)
chr6 (50-188)||(22334737-22334877)
chr6 (48-188)||(21834736-21834874)
chr6 (50-188)||(22432386-22432525)
chr6 (50-153)||(20907863-20907966)
chr6 (50-153)||(17804319-17804421)
chr6 (50-153)||(19790660-19790763)
chr6 (50-153)||(22863068-22863170)
chr6 (48-134)||(18180623-18180708)
chr6 (51-153)||(23657302-23657403)
chr6 (48-109)||(16760078-16760139)
chr6 (48-109)||(31478072-31478133)
chr6 (50-142)||(22429923-22430014)
chr6 (50-153)||(14472392-14472494)
chr6 (50-153)||(25767050-25767152)
chr6 (106-188)||(16523249-16523331)
chr6 (51-141)||(27567503-27567593)
chr6 (48-109)||(1644491-1644552)
chr6 (48-89)||(16523330-16523371)
chr6 (48-105)||(22948891-22948948)
chr6 (48-105)||(22952847-22952904)
chr6 (48-109)||(23414763-23414824)
chr6 (48-105)||(23871335-23871392)
chr6 (48-105)||(23875291-23875348)
chr6 (48-109)||(27556521-27556582)
chr6 (137-190)||(31164691-31164744)
chr6 (69-153)||(27415824-27415907)
chr6 (137-188)||(15041396-15041447)
chr6 (50-153)||(18955645-18955747)
chr6 (54-109)||(27416120-27416175)
chr6 (48-134)||(22408205-22408290)
chr6 (48-94)||(14472054-14472100)
chr6 (48-94)||(18956040-18956086)
chr6 (50-86)||(1644827-1644863)
chr6 (50-86)||(8243983-8244019)
chr6 (50-86)||(11566984-11567020)
chr6 (50-86)||(19870712-19870748)
chr6 (50-86)||(23395190-23395226)
chr6 (50-86)||(23990042-23990078)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-190)||(34754-34943)
[»] chr3 (57 HSPs)
chr3 (2-188)||(15060378-15060564)
chr3 (2-174)||(16909836-16910008)
chr3 (3-188)||(15051603-15051788)
chr3 (1-190)||(23052921-23053111)
chr3 (2-174)||(16369494-16369666)
chr3 (2-188)||(14878351-14878539)
chr3 (2-188)||(17524998-17525181)
chr3 (48-183)||(322721-322856)
chr3 (1-119)||(12172889-12173007)
chr3 (48-188)||(18383763-18383903)
chr3 (2-188)||(23408522-23408705)
chr3 (48-188)||(12496388-12496527)
chr3 (48-188)||(19725758-19725898)
chr3 (48-188)||(11862923-11863063)
chr3 (13-188)||(23077324-23077490)
chr3 (48-180)||(11298383-11298514)
chr3 (50-153)||(1982692-1982794)
chr3 (48-147)||(11851711-11851810)
chr3 (51-153)||(3389817-3389919)
chr3 (51-164)||(12037823-12037936)
chr3 (51-153)||(3402837-3402939)
chr3 (50-174)||(327025-327148)
chr3 (50-153)||(11557266-11557369)
chr3 (50-153)||(11595020-11595123)
chr3 (50-153)||(15482785-15482887)
chr3 (50-153)||(20461382-20461484)
chr3 (94-174)||(856314-856394)
chr3 (50-153)||(7793231-7793333)
chr3 (50-153)||(14499450-14499552)
chr3 (135-186)||(15877676-15877727)
chr3 (54-140)||(2897718-2897803)
chr3 (104-170)||(14179624-14179690)
chr3 (50-153)||(30066071-30066173)
chr3 (50-153)||(42326074-42326177)
chr3 (50-148)||(55022992-55023089)
chr3 (48-109)||(4589035-4589096)
chr3 (48-109)||(5223182-5223243)
chr3 (48-109)||(12339584-12339645)
chr3 (50-134)||(15877947-15878032)
chr3 (48-105)||(15964755-15964812)
chr3 (48-105)||(15968679-15968736)
chr3 (48-105)||(15972603-15972660)
chr3 (48-109)||(19775551-19775612)
chr3 (48-109)||(37439898-37439959)
chr3 (50-153)||(11070193-11070295)
chr3 (50-153)||(11854858-11854960)
chr3 (48-109)||(11300692-11300753)
chr3 (48-109)||(15464983-15465044)
chr3 (50-153)||(11165411-11165513)
chr3 (50-153)||(11300393-11300495)
chr3 (48-87)||(14665531-14665570)
chr3 (50-86)||(7109823-7109859)
chr3 (50-86)||(7113758-7113794)
chr3 (50-86)||(22321789-22321825)
chr3 (50-86)||(22336844-22336880)
chr3 (50-86)||(27409592-27409628)
chr3 (50-86)||(28949849-28949885)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-190)||(13921-14110)
[»] scaffold0158 (2 HSPs)
scaffold0158 (1-188)||(2925-3112)
scaffold0158 (1-188)||(6591-6778)
[»] chr1 (32 HSPs)
chr1 (51-188)||(42865057-42865195)
chr1 (3-188)||(6151943-6152128)
chr1 (1-188)||(22831224-22831410)
chr1 (5-176)||(21022728-21022899)
chr1 (48-174)||(22449126-22449252)
chr1 (2-188)||(21714640-21714823)
chr1 (48-188)||(18181967-18182107)
chr1 (51-153)||(18393845-18393947)
chr1 (69-190)||(21787886-21788008)
chr1 (64-188)||(20091319-20091443)
chr1 (51-153)||(45310248-45310350)
chr1 (48-153)||(3472807-3472911)
chr1 (51-141)||(8761526-8761616)
chr1 (50-134)||(24783001-24783084)
chr1 (50-153)||(45489624-45489727)
chr1 (104-188)||(48603706-48603790)
chr1 (50-153)||(3704946-3705049)
chr1 (50-153)||(16080326-16080428)
chr1 (48-134)||(17678488-17678573)
chr1 (50-153)||(1010845-1010947)
chr1 (48-109)||(1925391-1925452)
chr1 (48-109)||(20229071-20229132)
chr1 (48-109)||(20924405-20924466)
chr1 (69-153)||(33797674-33797757)
chr1 (50-153)||(36819190-36819292)
chr1 (138-187)||(22468543-22468592)
chr1 (56-109)||(33797408-33797461)
chr1 (50-86)||(16375406-16375442)
chr1 (50-86)||(20228757-20228793)
chr1 (50-86)||(21407477-21407513)
chr1 (206-246)||(22507876-22507916)
chr1 (50-86)||(52639663-52639699)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-188)||(6924-7111)
[»] scaffold0081 (3 HSPs)
scaffold0081 (1-188)||(14757-14945)
scaffold0081 (1-188)||(23772-23960)
scaffold0081 (1-188)||(39196-39384)
[»] scaffold0035 (1 HSPs)
scaffold0035 (48-188)||(46573-46713)
[»] chr2 (34 HSPs)
chr2 (1-188)||(24673662-24673849)
chr2 (50-188)||(22740806-22740945)
chr2 (50-188)||(22758561-22758700)
chr2 (69-188)||(22798972-22799092)
chr2 (62-188)||(21918162-21918288)
chr2 (2-188)||(23038125-23038308)
chr2 (48-180)||(25963571-25963702)
chr2 (50-180)||(22811765-22811896)
chr2 (51-154)||(40428597-40428700)
chr2 (50-177)||(23103253-23103381)
chr2 (75-188)||(23019552-23019666)
chr2 (94-188)||(40622054-40622148)
chr2 (4-80)||(45678074-45678150)
chr2 (50-153)||(25961416-25961518)
chr2 (50-153)||(19688638-19688740)
chr2 (50-153)||(24174932-24175035)
chr2 (50-153)||(24655220-24655323)
chr2 (70-180)||(37524820-37524929)
chr2 (50-153)||(24735525-24735627)
chr2 (114-188)||(45678001-45678075)
chr2 (51-152)||(21327449-21327550)
chr2 (50-153)||(10101527-10101629)
chr2 (54-153)||(24716412-24716510)
chr2 (54-109)||(41531266-41531321)
chr2 (51-152)||(21318518-21318619)
chr2 (48-109)||(30345253-30345314)
chr2 (48-109)||(1283172-1283233)
chr2 (48-109)||(31344995-31345056)
chr2 (54-153)||(24870016-24870115)
chr2 (50-86)||(12901460-12901496)
chr2 (50-86)||(15477725-15477761)
chr2 (50-86)||(24649479-24649515)
chr2 (50-86)||(27601918-27601954)
chr2 (50-86)||(41530958-41530994)
[»] chr5 (37 HSPs)
chr5 (51-188)||(14079283-14079421)
chr5 (2-188)||(23501191-23501378)
chr5 (2-188)||(23201454-23201642)
chr5 (48-188)||(21366512-21366652)
chr5 (1-188)||(23512191-23512380)
chr5 (69-188)||(21873402-21873522)
chr5 (50-188)||(37724038-37724177)
chr5 (93-188)||(26704244-26704339)
chr5 (93-188)||(26973977-26974072)
chr5 (47-188)||(20805680-20805820)
chr5 (47-153)||(20767102-20767207)
chr5 (48-153)||(23458721-23458825)
chr5 (48-153)||(23462982-23463086)
chr5 (94-174)||(18769864-18769944)
chr5 (106-174)||(22032507-22032575)
chr5 (50-153)||(123187-123289)
chr5 (50-153)||(12028446-12028549)
chr5 (48-153)||(23451477-23451581)
chr5 (50-153)||(24222009-24222112)
chr5 (50-174)||(23572215-23572338)
chr5 (48-109)||(11220531-11220592)
chr5 (48-109)||(11225117-11225178)
chr5 (48-109)||(11228940-11229001)
chr5 (48-109)||(11230929-11230990)
chr5 (50-141)||(22757258-22757349)
chr5 (48-109)||(11226950-11227011)
chr5 (48-109)||(18356075-18356136)
chr5 (48-109)||(20911097-20911158)
chr5 (48-107)||(10753147-10753206)
chr5 (50-153)||(15236662-15236764)
chr5 (69-148)||(18356468-18356546)
chr5 (54-109)||(40723849-40723904)
chr5 (51-108)||(17919078-17919134)
chr5 (50-90)||(17410562-17410602)
chr5 (48-87)||(24767493-24767532)
chr5 (50-93)||(31342258-31342301)
chr5 (50-86)||(20295969-20296005)
[»] chr7 (43 HSPs)
chr7 (48-188)||(12321588-12321728)
chr7 (2-186)||(9703357-9703538)
chr7 (48-188)||(14430012-14430152)
chr7 (3-188)||(24054560-24054742)
chr7 (50-188)||(18154682-18154821)
chr7 (50-188)||(19649330-19649469)
chr7 (50-153)||(3271955-3272058)
chr7 (121-187)||(11880459-11880525)
chr7 (50-153)||(12318249-12318351)
chr7 (50-153)||(15605154-15605256)
chr7 (94-174)||(17137923-17138003)
chr7 (50-153)||(11312770-11312872)
chr7 (50-153)||(16583378-16583479)
chr7 (106-174)||(12187205-12187273)
chr7 (50-142)||(15580813-15580904)
chr7 (50-153)||(33229-33331)
chr7 (50-153)||(70647-70749)
chr7 (50-153)||(74756-74858)
chr7 (50-153)||(9446040-9446143)
chr7 (48-109)||(15083979-15084040)
chr7 (51-134)||(2760265-2760347)
chr7 (50-153)||(13635351-13635453)
chr7 (50-153)||(20569477-20569580)
chr7 (48-109)||(39722049-39722110)
chr7 (48-105)||(45170272-45170329)
chr7 (206-246)||(18454045-18454085)
chr7 (48-107)||(25927431-25927490)
chr7 (48-109)||(1859012-1859073)
chr7 (48-109)||(13918706-13918767)
chr7 (72-153)||(42205257-42205338)
chr7 (50-86)||(39722388-39722424)
chr7 (54-109)||(2530316-2530371)
chr7 (48-87)||(2832389-2832428)
chr7 (48-87)||(9751703-9751742)
chr7 (48-87)||(39267847-39267886)
chr7 (50-86)||(12714986-12715022)
chr7 (50-86)||(12718790-12718826)
chr7 (50-86)||(12723701-12723737)
chr7 (50-86)||(16114363-16114399)
chr7 (50-86)||(16117516-16117552)
chr7 (50-86)||(16907149-16907185)
chr7 (50-86)||(18279525-18279561)
chr7 (50-86)||(18283488-18283524)
[»] scaffold0297 (1 HSPs)
scaffold0297 (2-188)||(15515-15698)
[»] scaffold0149 (2 HSPs)
scaffold0149 (51-176)||(3877-4003)
scaffold0149 (51-176)||(8308-8434)
[»] scaffold0671 (1 HSPs)
scaffold0671 (1-188)||(6188-6376)
[»] scaffold0174 (1 HSPs)
scaffold0174 (51-187)||(18300-18437)
[»] scaffold0043 (1 HSPs)
scaffold0043 (2-187)||(18330-18512)
[»] scaffold0425 (1 HSPs)
scaffold0425 (48-188)||(290-430)
[»] scaffold0004 (2 HSPs)
scaffold0004 (50-188)||(69930-70069)
scaffold0004 (50-148)||(10471-10568)
[»] scaffold0111 (1 HSPs)
scaffold0111 (51-188)||(32570-32707)
[»] scaffold0761 (1 HSPs)
scaffold0761 (48-187)||(6156-6295)
[»] scaffold0037 (2 HSPs)
scaffold0037 (48-188)||(21415-21555)
scaffold0037 (48-109)||(80616-80677)
[»] scaffold0080 (1 HSPs)
scaffold0080 (48-174)||(18516-18642)
[»] scaffold0393 (1 HSPs)
scaffold0393 (48-181)||(1623-1756)
[»] scaffold0261 (1 HSPs)
scaffold0261 (50-188)||(1474-1613)
[»] scaffold0346 (1 HSPs)
scaffold0346 (48-153)||(15216-15321)
[»] scaffold0139 (1 HSPs)
scaffold0139 (3-188)||(20075-20256)
[»] scaffold0101 (1 HSPs)
scaffold0101 (2-190)||(8801-8986)
[»] scaffold0096 (1 HSPs)
scaffold0096 (69-188)||(16195-16315)
[»] scaffold0124 (1 HSPs)
scaffold0124 (48-167)||(42752-42871)
[»] scaffold0220 (1 HSPs)
scaffold0220 (2-187)||(4780-4966)
[»] scaffold0131 (1 HSPs)
scaffold0131 (50-188)||(36592-36731)
[»] scaffold0031 (3 HSPs)
scaffold0031 (2-185)||(65642-65821)
scaffold0031 (50-153)||(53687-53789)
scaffold0031 (48-109)||(36348-36409)
[»] scaffold0023 (2 HSPs)
scaffold0023 (75-188)||(38325-38439)
scaffold0023 (75-185)||(23516-23626)
[»] scaffold1895 (1 HSPs)
scaffold1895 (69-188)||(1073-1193)
[»] scaffold1296 (1 HSPs)
scaffold1296 (48-188)||(523-663)
[»] scaffold0555 (1 HSPs)
scaffold0555 (50-188)||(715-855)
[»] scaffold1326 (1 HSPs)
scaffold1326 (48-151)||(1373-1476)
[»] scaffold0021 (1 HSPs)
scaffold0021 (50-188)||(174901-175040)
[»] scaffold0676 (1 HSPs)
scaffold0676 (48-153)||(4560-4665)
[»] scaffold0615 (1 HSPs)
scaffold0615 (48-188)||(1930-2071)
[»] scaffold0104 (2 HSPs)
scaffold0104 (48-188)||(1960-2099)
scaffold0104 (48-188)||(9642-9781)
[»] scaffold0412 (1 HSPs)
scaffold0412 (48-183)||(6267-6401)
[»] scaffold0079 (1 HSPs)
scaffold0079 (48-183)||(44211-44345)
[»] scaffold0476 (2 HSPs)
scaffold0476 (51-153)||(5719-5820)
scaffold0476 (51-153)||(6914-7015)
[»] scaffold0280 (1 HSPs)
scaffold0280 (51-153)||(19173-19275)
[»] scaffold0102 (1 HSPs)
scaffold0102 (64-188)||(48306-48431)
[»] scaffold0367 (1 HSPs)
scaffold0367 (48-188)||(1027-1166)
[»] scaffold0015 (1 HSPs)
scaffold0015 (51-154)||(192197-192300)
[»] scaffold0184 (1 HSPs)
scaffold0184 (51-153)||(4106-4208)
[»] scaffold0198 (1 HSPs)
scaffold0198 (50-165)||(23979-24094)
[»] scaffold0439 (2 HSPs)
scaffold0439 (51-153)||(2317-2419)
scaffold0439 (51-153)||(10177-10279)
[»] scaffold0215 (1 HSPs)
scaffold0215 (94-188)||(27002-27096)
[»] scaffold0171 (1 HSPs)
scaffold0171 (51-152)||(35393-35494)
[»] scaffold0210 (2 HSPs)
scaffold0210 (94-170)||(21670-21746)
scaffold0210 (94-170)||(29562-29638)
[»] scaffold0017 (2 HSPs)
scaffold0017 (54-154)||(15090-15190)
scaffold0017 (54-154)||(19612-19712)
[»] scaffold0003 (3 HSPs)
scaffold0003 (50-138)||(413947-414035)
scaffold0003 (69-153)||(71454-71537)
scaffold0003 (56-109)||(71188-71241)
[»] scaffold0550 (1 HSPs)
scaffold0550 (50-153)||(7603-7706)
[»] scaffold1220 (1 HSPs)
scaffold1220 (48-153)||(1922-2026)
[»] scaffold1124 (1 HSPs)
scaffold1124 (94-174)||(2055-2135)
[»] scaffold0637 (1 HSPs)
scaffold0637 (50-153)||(8693-8796)
[»] scaffold0036 (1 HSPs)
scaffold0036 (50-153)||(66297-66399)
[»] scaffold0216 (1 HSPs)
scaffold0216 (48-94)||(17051-17097)
[»] scaffold0574 (1 HSPs)
scaffold0574 (2-71)||(7771-7840)
[»] scaffold0327 (1 HSPs)
scaffold0327 (84-153)||(445-514)
[»] scaffold0093 (1 HSPs)
scaffold0093 (75-149)||(4690-4764)
[»] scaffold0044 (2 HSPs)
scaffold0044 (50-153)||(13026-13128)
scaffold0044 (53-110)||(19313-19369)
[»] scaffold0001 (2 HSPs)
scaffold0001 (50-153)||(422413-422516)
scaffold0001 (50-112)||(173412-173473)
[»] scaffold0008 (1 HSPs)
scaffold0008 (48-142)||(30637-30730)
[»] scaffold0141 (1 HSPs)
scaffold0141 (48-109)||(14349-14410)
[»] scaffold0016 (1 HSPs)
scaffold0016 (48-109)||(207764-207825)
[»] scaffold0012 (1 HSPs)
scaffold0012 (48-109)||(189639-189700)
[»] scaffold0177 (1 HSPs)
scaffold0177 (53-153)||(13369-13468)
[»] scaffold0114 (1 HSPs)
scaffold0114 (94-174)||(7469-7549)
[»] scaffold0349 (1 HSPs)
scaffold0349 (50-153)||(12544-12646)
[»] scaffold0029 (5 HSPs)
scaffold0029 (50-153)||(80834-80936)
scaffold0029 (50-174)||(12894-13017)
scaffold0029 (48-109)||(80498-80559)
scaffold0029 (50-86)||(61560-61596)
scaffold0029 (50-86)||(65476-65512)
[»] scaffold0228 (1 HSPs)
scaffold0228 (50-112)||(18555-18616)
[»] scaffold0299 (1 HSPs)
scaffold0299 (48-109)||(6798-6859)
[»] scaffold0157 (1 HSPs)
scaffold0157 (48-109)||(32922-32983)
[»] scaffold0051 (1 HSPs)
scaffold0051 (48-109)||(31002-31063)
[»] scaffold0405 (1 HSPs)
scaffold0405 (57-153)||(9547-9642)
[»] scaffold0525 (1 HSPs)
scaffold0525 (50-153)||(3757-3859)
[»] scaffold0483 (1 HSPs)
scaffold0483 (83-153)||(485-555)
[»] scaffold0342 (1 HSPs)
scaffold0342 (51-153)||(7152-7253)
[»] scaffold0293 (1 HSPs)
scaffold0293 (55-109)||(20391-20445)
[»] scaffold0109 (3 HSPs)
scaffold0109 (83-153)||(45272-45342)
scaffold0109 (48-109)||(36202-36263)
scaffold0109 (50-86)||(35891-35927)
[»] scaffold0229 (1 HSPs)
scaffold0229 (48-109)||(11763-11824)
[»] scaffold0401 (1 HSPs)
scaffold0401 (202-246)||(2932-2976)
[»] scaffold0120 (1 HSPs)
scaffold0120 (57-153)||(19899-19994)
[»] scaffold1052 (1 HSPs)
scaffold1052 (48-87)||(3035-3074)
[»] scaffold0410 (1 HSPs)
scaffold0410 (50-97)||(11511-11558)
[»] scaffold0324 (1 HSPs)
scaffold0324 (157-188)||(15643-15674)
[»] scaffold0166 (1 HSPs)
scaffold0166 (48-87)||(9990-10029)
[»] scaffold0022 (1 HSPs)
scaffold0022 (48-77)||(73725-73754)
[»] scaffold0372 (1 HSPs)
scaffold0372 (50-86)||(5049-5085)
[»] scaffold0268 (1 HSPs)
scaffold0268 (50-86)||(956-992)
[»] scaffold0028 (1 HSPs)
scaffold0028 (50-86)||(58667-58703)


Alignment Details
Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 12570107 - 12570296
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| |||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12570107 agatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 12570206  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 190  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  12570207 cataacagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggt 12570296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 23843613 - 23843751
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23843613 tcaagtaatacaattaatcattaaaacacattataatcaacattaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattac 23843712  T
Q  150 tacccaggggtccatctctaatcaaattatgcgacacag 188  Q
     ||||| ||||||||||||||||||||||||||||||||    
T  23843713 cacccaagggtccatctctaatcaaattatgcgacacag 23843751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 44675767 - 44675905
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  44675767 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattac 44675866  T
Q  150 tacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  44675867 tacctaggggtccatctctaatcaaattatgcgacacag 44675905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 13569612 - 13569783
Alignment:
Q  12 aaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagct 110  Q
    ||||| |||||||| ||||||||||| ||| | |    |||||||||||||||||| ||| |  |||||| ||| ||||| |||||||||||||||||||    
T  13569612 aaaagtaagcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacatcatctcacatcatattcaacattaacatttcataacagct 13569707  T
Q  111 tcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacac 186  Q
    || ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  13569708 tcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacac 13569783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 58 - 187
Target Start/End: Complemental strand, 15125130 - 15125001
Alignment:
Q  58 atgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccag 156  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||    
T  15125130 atgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcagttaacat-ttaaaaaggtcactttactacccag 15125032  T
Q  157 gggtccatctctaatcaaattatgcgacaca 187  Q
    ||||||| |||||| ||||||||||||||||    
T  15125031 gggtccaactctaaacaaattatgcgacaca 15125001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 15093926 - 15094046
Alignment:
Q  69 cattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 167  Q
    ||||| ||||||| ||| ||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  15093926 cattatatcacatcatattcaacattaacatttcataacagcttcagagattgcagttaacttcttatataggtcacattactaaccaagggtccatctc 15094025  T
Q  168 taatcaaattatgcgacacag 188  Q
    |||||||||||||||||||||    
T  15094026 taatcaaattatgcgacacag 15094046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 16356938 - 16356799
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||| ||  |||||| || |||| ||||||||| |||||| |||||||||||||| ||||||||||||    
T  16356938 atttcaagtaatgcatttaatcattaaatcacattacaaaaaacttagcagttca-aacagcttcacagatttcagttaacatcttaaataggtcacatt 16356840  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  16356839 actacctaagggtccaaccctaatcaacttatgcgaaacag 16356799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 16488064 - 16487924
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||  |||||| |||||  || ||||||||||| ||||| ||||||    
T  16488064 atttcaagtaatgcatttaatcattaaatcacattataatcagcttaacagttcatagtagcttcacagatctcaattaacatcttaaataggacacatt 16487965  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||||| | |||||| |||||||| ||||    
T  16487964 actacctaagggtccatcccaaatcaacttatgcgaaacag 16487924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 16348650 - 16348511
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||| |||||||||| |||||||||||||||||||| || ||||||| || || | || |||||| |||||| |||||||||||||| ||||||||||||    
T  16348650 attttaagtaatgcatttaatcattaaatcacattacaaacaacttagcagtttaaaa-agcttcacagatttcagttaacatcttaaataggtcacatt 16348552  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  16348551 actacctaagggtccaaccctaatcaacttatgcgaaacag 16348511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 5338964 - 5338862
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||   |||||||||||||| |||||| || ||||||||||||||||||| || ||||    
T  5338964 tcaagtaatgcaattaatcaataaatcacatcataatcagcttaatggttcataacagcttctcagatttcatttaacatcttatataggtctcactact 5338865  T
Q  151 acc 153  Q
    |||    
T  5338864 acc 5338862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 15353290 - 15353188
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||| || ||| |||||||||||||| ||||||  |||||||    
T  15353290 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacaaattccagttaacatcttagataggtttcattact 15353191  T
Q  151 acc 153  Q
    |||    
T  15353190 acc 15353188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 36133945 - 36133844
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| ||||| |    
T  36133945 tcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttcccagttaatatcttaaataggtctcattaat 36133847  T
Q  151 acc 153  Q
    |||    
T  36133846 acc 36133844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 15121786 - 15121649
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaa-catttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||  ||| ||||| |  |||| |||||||||| || ||| ||||| |||| || ||||||||||||||| ||||||||||||| |||||    
T  15121786 ttcaagtaatgca--taaacattataatacatcataatcaactcaaacatctcatatcagcctcacagattgcagttaacttcttatataggtctcatta 15121689  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||| |  ||||||| ||||| ||| |||| ||||||||    
T  15121688 ctacctaatggtccatgtctaaacaagttattcgacacag 15121649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 17810394 - 17810496
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | |||||||||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  17810394 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttaacatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 17810492  T
Q  150 tacc 153  Q
    ||||    
T  17810493 tacc 17810496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 25555638 - 25555741
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||| ||  ||||||    
T  25555638 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataagtttcattac 25555737  T
Q  150 tacc 153  Q
    ||||    
T  25555738 tacc 25555741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 11250545 - 11250442
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    |||| |||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| ||||  || |  |||||||||||||| ||||||  ||||||    
T  11250545 ttcatgtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcataggtctcagttaacatcttaaataggtttcattac 11250446  T
Q  150 tacc 153  Q
    ||||    
T  11250445 tacc 11250442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 14757406 - 14757304
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  14757406 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 14757308  T
Q  150 tacc 153  Q
    ||||    
T  14757307 tacc 14757304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 16351833 - 16351730
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||| | |||| || ||| | | |||||||||| ||||||  ||||||    
T  16351833 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaaaaacttcacaaattccggctaacatcttaaataggtttcattac 16351734  T
Q  150 tacc 153  Q
    ||||    
T  16351733 tacc 16351730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 10712639 - 10712700
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  10712639 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 10712700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 10926409 - 10926470
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  10926409 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 10926470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 12487494 - 12487555
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  12487494 atttcgagtaatgcatttaatcattaaatcacattaaaaacaacttagcagttcataacagc 12487555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 14954490 - 14954433
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  14954490 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 14954433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 25689653 - 25689710
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  25689653 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 25689710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 43256400 - 43256339
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  43256400 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 43256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 43256141 - 43256043
Alignment:
Q  53 aagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactac 152  Q
    ||||||||||  |||| |||| ||||||||||||||| |||||||||||| || |||||| ||| |  |||||||||||||| ||||||| ||||| |||    
T  43256141 aagtaatgcatataat-attatatcacattataatca-cttaacatttcacaatagcttcacagttcccagttaacatcttaaataggtctcattagtac 43256044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 27534148 - 27534250
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||  | |||||| ||  |  |||||||||||| | ||||||| |||||     
T  27534148 ttcaagtaatgcaatcaatcaataaatcacattataa-caacttagcatttcaatatagcttcacaattaacagttaacatctcagataggtctcattag 27534246  T
Q  150 tacc 153  Q
    ||||    
T  27534247 tacc 27534250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 13813005 - 13812966
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  13813005 atttcaagtaatgcatttaatcattaattcacattataat 13812966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 20157446 - 20157407
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  20157446 atttcaagtaatgcatttaatcattaattcacattataat 20157407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 22634406 - 22634369
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataat 87  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  22634406 ttcaagtaatgcatttaatcattaattcacattataat 22634369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 4561318 - 4561282
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  4561318 ttcaagtaatgcaatcaatcaataaatcacattataa 4561282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 5756922 - 5756886
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  5756922 ttcaagtaatgcaatcaatcaataaatcacattataa 5756886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 9556652 - 9556688
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  9556652 ttcaagtaatgcaatcaatcaataaatcacattataa 9556688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 5e-77; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 24755807 - 24755996
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    ||||||||||  ||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24755807 agatatcaaattaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 24755906  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 190  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  24755907 cataacagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggt 24755996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 16184813 - 16185003
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatt 99  Q
    |||||| ||| |||||||||||||| ||||||||||| ||  ||| ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||     
T  16184813 agatattaaataaaagcaagcatcatctcaatcattcatttattaacatttcaagcaatgcaattaaacattaaatcacattataatcaacattaacatc 16184912  T
Q  100 tcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 190  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16184913 tcatatcagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 16185003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 377364 - 377537
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| | |||||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  377364 agatatcaaatagaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgcaattaatcattaaatcacattatgatcagcttaacattt 377463  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 174  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  377464 cataacagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccctaatcaa 377537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 19259614 - 19259443
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttc 101  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||| ||| |||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  19259614 gatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgaaattaatcattaaatcacattataatcaacttaacagttc 19259515  T
Q  102 ataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatca 173  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||    
T  19259514 ataatagcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatca 19259443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 19983228 - 19983366
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  19983228 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattac 19983327  T
Q  150 tacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  19983328 tacccagggttccatctctaatcaaattatgcgacacag 19983366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 19899230 - 19899368
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    |||||||||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  19899230 tcaagtaatgaaattaatcattaaatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattac 19899329  T
Q  150 tacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  19899330 tacccaagggtccatctctaatcaaattatgcgacacag 19899368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 21168755 - 21168567
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatt 99  Q
    |||||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| ||| |  | |||| ||| ||||| ||||||||    
T  21168755 agatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatt 21168656  T
Q  100 tcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||||  |||||||||||||||||| ||||||||||||    
T  21168655 tcataacagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatgcgacacag 21168567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 20466025 - 20465899
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  20466025 atttcaagtaatgcaattaatcattaaatcacattataatcaacttagcatttcataacagcttcacagattgcagttaacctcttatataggtcacatt 20465926  T
Q  148 actacccaggggtccatctctaatcaa 174  Q
    |||||| | |||||| || ||||||||    
T  20465925 actacctaagggtccgtccctaatcaa 20465899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 30643278 - 30643137
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc-ttcgcagattgcagttaacatcttatataggtcacat 146  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| ||| ||||||||||||||||||||| |||||||||||    
T  30643278 atttcaagtaatgcaattaatcattaaatcatattataatcaacttaacagttcgtaacagctttcacagattgcagttaacatcttaaataggtcacat 30643179  T
Q  147 tactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| | ||||||| | |||||||| || ||||| ||||    
T  30643178 tactacctaagggtccaaccctaatcaatttgtgcgaaacag 30643137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 21162082 - 21161904
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatt 99  Q
    |||||||||| |||||||||||||| ||||||||||| ||  ||| |||||||||||||||||||||          |||| ||| ||||| ||||||||    
T  21162082 agatatcaaataaaagcaagcatcatctcaatcattcatttattaacatttcaagtaatgcaattaa----------acatcatattcaacattaacatt 21161993  T
Q  100 tcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||||  |||||||||||||||||| ||| ||||||||    
T  21161992 tcataacagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatacgacacag 21161904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 17353966 - 17353784
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaa-cattt 100  Q
    ||||||||| | |||||||||||| ||||||||||| ||| | |    ||||||||||| ||| || ||| |  |||||| ||| ||||| ||| |||||    
T  17353966 gatatcaaatacaagcaagcatcatctcaatcattcattcataa----ttcaagtaatgaaatcaaacatcatctcacatcatattcaacataaacattt 17353871  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 187  Q
    |||||||||||| |||||| || ||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||    
T  17353870 cataacagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacaca 17353784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 17926692 - 17926553
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||||||| |||||| || ||||||||||| ||||||||||||    
T  17926692 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttcacagatttcaattaacatcttaaataggtcacatt 17926594  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  17926593 actacctaagggtccaaccctaatcaatttatgcgaaacag 17926553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 23776775 - 23776681
Alignment:
Q  94 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||| | | |||||||||||| |||||||||||||||||    
T  23776775 aacatttcataacagcttcacaaattgcagttaacttcttatataggtcacattactacctaagtgtccatctctaaccaaattatgcgacacag 23776681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 15603003 - 15602863
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca-tttcataacagcttcgcagattgcagttaacatcttatataggtcacat 146  Q
    ||||||||||||||| |||||||||||||||||||| |  ||||||| || ||||| ||||||||| |||||| |||||||||||||| |||||||||||    
T  15603003 atttcaagtaatgcatttaatcattaaatcacattacagacaacttagcagtttca-aacagcttcacagatttcagttaacatcttaaataggtcacat 15602905  T
Q  147 tactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||  | ||||||| | |||||||| |||||||| ||||    
T  15602904 tactacttaagggtccaaccctaatcaacttatgcgaaacag 15602863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 16410240 - 16410101
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| || || ||| ||||||| |||||| ||||||||||||    
T  16410240 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacatatttcagttaatatcttaaataggtcacatt 16410142  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||| | |||||||| || ||||||||||    
T  16410141 actacctaagggtccaaccctaatcaatttgtgcgacacag 16410101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 15611455 - 15611315
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca-tttcataacagcttcgcagattgcagttaacatcttatataggtcacat 146  Q
    ||||||||||||||| |||||||||||||||||||| |  |||||||  | ||||| ||||||||| |||||| |||||||||||||| |||||||||||    
T  15611455 atttcaagtaatgcatttaatcattaaatcacattacagacaacttagtagtttca-aacagcttcacagatttcagttaacatcttaaataggtcacat 15611357  T
Q  147 tactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||  | ||||||| | |||||||| |||||||| ||||    
T  15611356 tactacttaagggtccaaccctaatcaacttatgcgaaacag 15611315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 19976647 - 19976718
Alignment:
Q  117 attgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  19976647 attgcagttaacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacag 19976718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 21395910 - 21395828
Alignment:
Q  106 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| |||||| || ||||| ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  21395910 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacag 21395828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 21790403 - 21790321
Alignment:
Q  106 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| |||||| || ||||| ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  21790403 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacag 21790321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 20856409 - 20856306
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||||||||||||||||| || || |||| || |||||||||| ||| |||||  ||| |||||||||  ||||||||||||||    
T  20856409 ttcaagtaatgcatttaatcattaaatcacattacaaacagcttagcaattcataacaggttcacagatctcagctaacatctttaataggtcacattac 20856310  T
Q  150 tacc 153  Q
    ||||    
T  20856309 tacc 20856306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 21389380 - 21389298
Alignment:
Q  106 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| || ||| || ||||| || ||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  21389380 cagcttcacatattacaattaacttcatatattggtctcattactacccaagggtccatctctaatcaaatcatgcgacacag 21389298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 22010664 - 22010579
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 134  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||| | || |||||| ||||||||||||||    
T  22010664 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacaacctcacagatttcagttaacatctta 22010579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 21828337 - 21828276
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  21828337 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 21828276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 14398096 - 14398035
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  14398096 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 14398035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 16861312 - 16861208
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||| | |||||||||||||||||||| || |||||||||| |||| |||||| |  |||||| ||| |||| ||||| ||| ||| || |    
T  16861312 atttcaagtaatgtatttaatcattaaatcacattacaaacaacttaacagttca-aacagccttacagatttcagctaacctcttaaatatgtctcact 16861214  T
Q  148 actacc 153  Q
    ||||||    
T  16861213 actacc 16861208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 18862968 - 18862911
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  18862968 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 18862911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 21410733 - 21410794
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  21410733 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 21410794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 21805225 - 21805286
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  21805225 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 21805286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 39094907 - 39094861
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaaca 97  Q
    |||||||||||| ||||||||||||| |||||| || ||||||||||    
T  39094907 tcaagtaatgcatttaatcattaaattacattacaaacaacttaaca 39094861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 19278267 - 19278231
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  19278267 ttcaagtaatgcaatcaatcaataaatcacattataa 19278231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 21972569 - 21972533
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  21972569 ttcaagtaatgcaatcaatcaataaatcacattataa 21972533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 21976654 - 21976618
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  21976654 ttcaagtaatgcaatcaatcaataaatcacattataa 21976618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 22111973 - 22112009
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  22111973 ttcaagtaatgcaatcaatcaataaatcacattataa 22112009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 39094855 - 39094823
Alignment:
Q  121 cagttaacatcttatataggtcacattactacc 153  Q
    |||||||||||||| ||||||||||||||||||    
T  39094855 cagttaacatcttaaataggtcacattactacc 39094823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 43251935 - 43251971
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  43251935 ttcaagtaatgcaatcaatcaataaatcacattataa 43251971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 2e-76; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 15894462 - 15894274
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| |||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15894462 agatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 15894363  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacagg 189  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  15894362 cataacagcttcacagattgtagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacagg 15894274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 21740055 - 21739868
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| | | ||||| |||||||||||||||| ||| ||| |||||||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  21740055 agatatcaaatagatgcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaagtcacattataaccagcttaacattt 21739956  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||||||||||| | | ||||||| |||| ||| | ||| |||||||    
T  21739955 cataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacacag 21739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 18907241 - 18907381
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || |||||||||||||||||| ||||||||||||    
T  18907241 atttcaagtaatgcaattaatcattaaatcacattataatgaacttaacagttcataacagcttcacatattgcagttaacatcttaaataggtcacatt 18907340  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||||| |||||||| | |||||||||||    
T  18907341 actacctaagggtccatccctaatcaattcatgcgacacag 18907381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 25642168 - 25642029
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||| ||||  |||||||||||||| ||||||||||||| |||||    
T  25642168 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacaacttcaaagattgcagttaacttcttatataggtctcatta 25642069  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  25642068 ctacccaagggtccatctctaatcaaattatgcgacacag 25642029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 19863112 - 19863253
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacat 146  Q
    |||||||||||||||||||||||||| ||||||| | | |||||  |||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||    
T  19863112 atttcaagtaatgcaattaatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcagttaacttcttatataggtctcat 19863211  T
Q  147 tactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||| |||||||||||||||||||| ||| |||||||    
T  19863212 tactacccaagggtccatctctaatcaaatgatgtgacacag 19863253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 19873254 - 19873395
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacat 146  Q
    |||||||||||||||||||||||||| ||||||| | | |||||  |||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||    
T  19873254 atttcaagtaatgcaattaatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcagttaacttcttatataggtctcat 19873353  T
Q  147 tactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||| ||||||||||||||| |||| |||||||||||    
T  19873354 tactacccaagggtccatctctaataaaatgatgcgacacag 19873395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 22438936 - 22439075
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    ||||||||||| |||||| | ||| ||||||| |||||||||  |||||| ||||||||||||| ||||||||||||||| |||||||||| || |||||    
T  22438936 ttcaagtaatgtaattaaactttatatcacatcataatcaacactaacatctcataacagcttcacagattgcagttaacttcttatatagatctcatta 22439035  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| ||||||||||| |||| |||||||||||||||    
T  22439036 ctacccaagggtccatctcaaatcgaattatgcgacacag 22439075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 22334877 - 22334737
Alignment:
Q  50 ttcaagtaatgcaatt-aatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||| ||||||| |||||||||||||||||||  ||| | || | || ||||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  22334877 ttcaagtagtgcaatttaatcattaaatcacattatgttcaccatttatatctcataacagctttacagattgcagttaacttcttatataggtctcatt 22334778  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
     ||||||||||||||| ||||||||||||||||||||||||    
T  22334777 gctacccaggggtccaactctaatcaaattatgcgacacag 22334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 21834874 - 21834736
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| || || |  |||||||| |||||| |||||||||||||| |||||||| |||    
T  21834874 atttcaagtaatacatttaatcattaaatcacattataatcaacttagcagttaa--acagcttcacagatttcagttaacatcttaaataggtcagatt 21834777  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||  | ||||||||| |||||||| |||||||| ||||    
T  21834776 actactgaagggtccatccctaatcaatttatgcgaaacag 21834736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 22432386 - 22432525
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    ||||||||||| |||||| || || ||||||| |||||||||  | |||| ||||||||||||| ||||||| ||||||| ||||||||||||| |||||    
T  22432386 ttcaagtaatgtaattaaacaatatatcacatcataatcaacactgacatctcataacagcttcacagattgtagttaacttcttatataggtctcatta 22432485  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| ||||||||||| |||||||| ||| |||||||    
T  22432486 ctacccaagggtccatctcaaatcaaataatgagacacag 22432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 20907966 - 20907863
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||||||  ||||||||||||| ||||||  ||||||    
T  20907966 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacaattcttaacaacttcccagattctagttaacatcttaaataggtttcattac 20907867  T
Q  150 tacc 153  Q
    ||||    
T  20907866 tacc 20907863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 17804319 - 17804421
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  17804319 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 17804417  T
Q  150 tacc 153  Q
    ||||    
T  17804418 tacc 17804421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 19790763 - 19790660
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||||||  ||||||    
T  19790763 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 19790664  T
Q  150 tacc 153  Q
    ||||    
T  19790663 tacc 19790660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 22863068 - 22863170
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  |||||||| || ||  |||||||||||||| ||||||| |||||     
T  22863068 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatacagcttcacaaataacagttaacatcttagataggtctcattag 22863166  T
Q  150 tacc 153  Q
    ||||    
T  22863167 tacc 22863170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 18180623 - 18180708
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 134  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||| || | |||||| |  |||||| ||||||||||||||    
T  18180623 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttaacagttga-aacagccttacagatttcagttaacatctta 18180708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 23657403 - 23657302
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||| |||||| ||||||||||||| || || |||||||| |||||||||| || |||||  |||||||||||| | |||| ||| ||||||    
T  23657403 tcaagtaatgcatttaatctttaaatcacattacaa-cagcttaacatatcataacagcctcacagatctcagttaacatctcacatagatcatattact 23657305  T
Q  151 acc 153  Q
    |||    
T  23657304 acc 23657302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 16760078 - 16760139
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  16760078 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 16760139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 31478133 - 31478072
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  31478133 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 31478072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 22430014 - 22429923
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtc 142  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| | |||| ||| |  ||| |||||||||| |||||||    
T  22430014 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataataacttcacagttctcagctaacatcttaaataggtc 22429923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 14472392 - 14472494
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  14472392 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 14472490  T
Q  150 tacc 153  Q
    ||||    
T  14472491 tacc 14472494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 25767152 - 25767050
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||| || ||| ||| |  ||||||| |||||| ||||||| |||||     
T  25767152 ttcaagtaatgcaatcaatcaataaattacattataatc-acttagcatttcataatagtttcacagttctcagttaatatcttaaataggtctcattag 25767054  T
Q  150 tacc 153  Q
    ||||    
T  25767053 tacc 25767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 16523331 - 16523249
Alignment:
Q  106 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| |||||  |||||||||||||| |||||||||||||||||| | || |||| | |||||||| |||||||| ||||    
T  16523331 cagcttcacagatctcagttaacatcttaaataggtcacattactacctaaggatccaaccctaatcaatttatgcgaaacag 16523249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 27567593 - 27567503
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggt 141  Q
    |||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| | | | |||||||| ||||||    
T  27567593 tcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagatttcggctgacatcttaaataggt 27567503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 1644491 - 1644552
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  1644491 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 1644552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 16523371 - 16523330
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatca 89  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  16523371 atttcaggtaatgcaattaatcattaaatcacattataatca 16523330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 22948891 - 22948948
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  22948891 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 22948948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 22952847 - 22952904
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  22952847 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 22952904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 23414763 - 23414824
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  23414763 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 23414824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 23871335 - 23871392
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  23871335 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 23871392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 23875291 - 23875348
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  23875291 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 23875348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 27556521 - 27556582
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  27556521 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 27556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 31164744 - 31164691
Alignment:
Q  137 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 190  Q
    |||||| || |||||||||||||||||||||||||||||  |||||||||||||    
T  31164744 taggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggt 31164691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 27415907 - 27415824
Alignment:
Q  69 cattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    ||||| ||||||||||||||| |||||||||||| || |||||| ||| |  |||||||||||||| ||||||| ||||| ||||    
T  27415907 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcattagtacc 27415824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 15041447 - 15041396
Alignment:
Q  137 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| ||||    
T  15041447 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacag 15041396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 18955747 - 18955645
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| | ||||||||||||| || |||| |||||||  | |||||| ||  |  |||||||||||||||||||||| |||||     
T  18955747 ttcaagtaatgcaatcaatcaatcaatcacattataaaca-cttagcatttcaatatagcttcacaattaacagttaacatcttatataggtctcattag 18955649  T
Q  150 tacc 153  Q
    ||||    
T  18955648 tacc 18955645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 27416175 - 27416120
Alignment:
Q  54 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  27416175 agtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 27416120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 22408290 - 22408205
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 134  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||  || |||||| || |||||||||||    
T  22408290 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagtctcacagatttcaattaacatctta 22408205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 14472054 - 14472100
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaactta 94  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||||    
T  14472054 atttcgagtaatgcatttaatcattaaatcacattacaaacaactta 14472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 18956086 - 18956040
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaactta 94  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||||    
T  18956086 atttcgagtaatgcatttaatcattaaatcacattacaaacaactta 18956040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 1644827 - 1644863
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  1644827 ttcaagtaatgcaatcaatcaataaatcacattataa 1644863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 8243983 - 8244019
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  8243983 ttcaagtaatgcaatcaatcaataaatcacattataa 8244019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 11566984 - 11567020
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  11566984 ttcaagtaatgcaatcaatcaataaatcacattataa 11567020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 19870712 - 19870748
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  19870712 ttcaagtaatgcaatcaatcaataaatcacattataa 19870748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 23395190 - 23395226
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  23395190 ttcaagtaatgcaatcaatcaataaatcacattataa 23395226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 23990042 - 23990078
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  23990042 ttcaagtaatgcaatcaatcaataaatcacattataa 23990078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 34943 - 34754
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| |||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34943 agatatcaaataaaatcaagcatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacaatt 34844  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 190  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| |||| ||||    
T  34843 cataacagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggt 34754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 3e-63; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 15060378 - 15060564
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttc 101  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||| ||| |||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  15060378 gatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgaaattaatcattaaatcacattataatcaacttaacagttc 15060477  T
Q  102 ataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||| |||||| ||||||||||||| |||||||||||||||||| ||||||| | ||||||||| |||||||| | |||||||||||    
T  15060478 ataatagcttcacagattgcagttaccatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacag 15060564  T

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Target: chr3; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 16909836 - 16910008
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttc 101  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||| ||| |||||||||  |||||||||||||||||||||||||||||||||||| |||    
T  16909836 gatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaataaaattaatcattaaatcacattataatcaacttaacaattc 16909935  T
Q  102 ataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 174  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||||||| | ||||||||| ||||||||    
T  16909936 ataaaagcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatcaa 16910008  T

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Target: chr3; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 15051603 - 15051788
Alignment:
Q  3 atatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttca 102  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||| ||| ||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  15051603 atatcaaataaaatcaagcatcaactcaatcattcattcattaacatctcaggtaatgaaattaatcattaaatcacattataatcaacttaacagttca 15051702  T
Q  103 taacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||| |||||| || ||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||| | |||||||||||    
T  15051703 taatagcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacag 15051788  T

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Target: chr3; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 23053111 - 23052921
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttac-catttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatt 99  Q
    |||||||||| |||||||||||||| ||||||||||| ||| |||  |||||||||||||||||||||| ||||||||||||||||| |||||||| |||    
T  23053111 agatatcaaataaaagcaagcatcatctcaatcattcattcattaatcatttcaagtaatgcaattaataattaaatcacattataaacaacttaaaatt 23053012  T
Q  100 tcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 190  Q
    |||||| |||||| || | |||| | |||||| || |||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23053011 tcataatagcttcacaaactgcattaaacatcctaaatagatcacattactacccaggggtccatctctaatcaagttatgcgacacaggt 23052921  T

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Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 16369494 - 16369666
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttc 101  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||| ||| |||||||||| ||||||| |||||||||||||||||||||||||||| |||    
T  16369494 gatatcaaataaaagcaagcatcaactcaatcattcattcattaacatctcaagtaatgaaattaatgattaaatcacattataatcaacttaacagttc 16369593  T
Q  102 ataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 174  Q
    ||||||||||| || |||| |||||||||||||||||| ||||||||||||| | ||||  ||| ||||||||    
T  16369594 ataacagcttcacatattggagttaacatcttatatagatcacattactacctaagggtgtatccctaatcaa 16369666  T

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Target: chr3; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 188
Target Start/End: Complemental strand, 14878539 - 14878351
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacattt 100  Q
    ||||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| | | |  | |||| ||| ||||| |||||||||    
T  14878539 gatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacttcatcttacatcatattcaacattaacattt 14878440  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactaccca-ggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||| |||||| ||||||||||||||| ||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  14878439 cataatagcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatcaaattatgcgacacag 14878351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 188
Target Start/End: Complemental strand, 17525181 - 17524998
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacattt 100  Q
    ||||||||| ||||| | |||||| ||||||||||| ||| | |    |||||||||||||||||| | | |  |||||| ||| ||||| |||||||||    
T  17525181 gatatcaaataaaagtatgcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacgtcatctcacatcatattcaacattaacattt 17525086  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17525085 cataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacag 17524998  T

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Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 322721 - 322856
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||   ||||||||||||| ||||||||||||    
T  322721 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacacttcataacagcttcacagatcttagttaacatcttaaataggtcacatt 322820  T
Q  148 actacccaggggtccatctctaatcaaattatgcga 183  Q
    |||||| | ||||||| | |||||||| ||||||||    
T  322821 actacctaagggtccaaccctaatcaatttatgcga 322856  T

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Target: chr3; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 12172889 - 12173007
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| ||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12172889 agatatcaaataaaagcaagtaccaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacattt 12172988  T
Q  101 cataacagcttcgcagatt 119  Q
    |||||||||||| ||||||    
T  12172989 cataacagcttcacagatt 12173007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 18383903 - 18383763
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| | |||  |||||||||||||| ||||||||||||    
T  18383903 atttcaagtaatgcaattaatcattaaatcacattaaaatcagcttaacagttcataacagcttcactgatctcagttaacatcttaaataggtcacatt 18383804  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  18383803 actacctaagggtccaaccctaatcaatttatgcgaaacag 18383763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 23408522 - 23408705
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacattt 100  Q
    ||||||||  |||||||||||||| ||||||||||| ||| | |    ||||||||||| |||||| ||||| ||||||| ||| |||||  |||||| |    
T  23408522 gatatcaattaaaagcaagcatcatctcaatcattcattcataa----ttcaagtaatgtaattaaacattatatcacatcatattcaacactaacatct 23408617  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||||||||||||| ||| | |||||| ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  23408618 cataacagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtccatctctaatcaaattatgcgacacag 23408705  T

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Target: chr3; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 12496388 - 12496527
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||||||| |||||| |||||||||||||| ||||||||||||    
T  12496388 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttcacagatttcagttaacatcttaaataggtcacatt 12496486  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  12496487 actacctaagggtccaaccctaatcaacttatgcgaaacag 12496527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 19725898 - 19725758
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| ||| ||| |||||| ||||| |||||||| || |||||||||    
T  19725898 atttcaagtaatgtaattaatcattaaatcacattataatcagcttaacagttcatagcagtttcacagatttcagttgacatcttaaatgggtcacatt 19725799  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  19725798 actacctaagggtccaaccctaatcaatttatgcgaaacag 19725758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 11862923 - 11863063
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||| |||||| ||  |||||||||| ||||||||||||    
T  11862923 atttcaagtaatgcaattaatcattaaatcacatcataatcagcttaacagttcatagcagcttcacagatttcaaataacatcttaaataggtcacatt 11863022  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    | |||| | |||||||   |||||||| |||| ||| ||||    
T  11863023 aatacctaagggtccaatcctaatcaatttatacgaaacag 11863063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 23077490 - 23077324
Alignment:
Q  13 aaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaa-catttcataacagctt 111  Q
    ||||||| ||||| ||||||||||| ||| ||| |||||||||||||||||||||          |||| |||| |||| ||| ||||||||||||||||    
T  23077490 aaagcaaacatcatctcaatcattcattcattaacatttcaagtaatgcaattaa----------acatcataaccaacataaacatttcataacagctt 23077401  T
Q  112 cgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    | || ||| |||| ||| ||| ||||||||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  23077400 cacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaattatgcgacacag 23077324  T

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Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 11298514 - 11298383
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| || || ||| ||||||| |||||| ||||||||||||    
T  11298514 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacaaatttcagttaatatcttaaataggtcacatt 11298416  T
Q  148 actacccaggggtccatctctaatcaaattatg 180  Q
    |||||| | ||||||| | ||||||||||||||    
T  11298415 actacctaagggtccaaccctaatcaaattatg 11298383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 1982794 - 1982692
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||||||| ||||||||| |||| || ||||||||||||||||||  |||||||||||||    
T  1982794 ttcaagtaatgcatttaatcattaaatcacattacaat-aacttaacagttcataacaacttcacatattgcagttaacatcttaattaggtcacattac 1982696  T
Q  150 tacc 153  Q
    ||||    
T  1982695 tacc 1982692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 11851711 - 11851810
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||| || ||| ||| |||||||||| ||||||||||||    
T  11851711 atttcaagtaatgcaattaatcattaaatcacatcataatcagcttaacagttcatagcagcttcacaaatttcagataacatcttaaataggtcacatt 11851810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 3389919 - 3389817
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||| ||| |  |||||||||||||| |||||||||||||||    
T  3389919 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacaggtctcagttaacatcttaaataggtcacattact 3389820  T
Q  151 acc 153  Q
    |||    
T  3389819 acc 3389817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 12037936 - 12037823
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | ||| |||||| || | |||||| || |||| |||| || ||    
T  12037936 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcaaaatggtttcacagatttcattaaacatcctaaatagatcacgttgct 12037837  T
Q  151 acccaggggtccat 164  Q
    || |||||||||||    
T  12037836 actcaggggtccat 12037823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 3402939 - 3402837
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    ||||| |||||| |||||||||||||||||||| || || ||||||| ||||||| |||||| ||| |  |||||||||||||| |||||||||||||||    
T  3402939 tcaaggaatgcatttaatcattaaatcacattacaaacagcttaacaattcataatagcttcacaggtctcagttaacatcttaaataggtcacattact 3402840  T
Q  151 acc 153  Q
    |||    
T  3402839 acc 3402837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 327148 - 327025
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  327148 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 327050  T
Q  150 tacccaggggtccatctctaatcaa 174  Q
    |||| | || ||| | |||||||||    
T  327049 tacctaaggttccttttctaatcaa 327025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 11557369 - 11557266
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| ||| ||||| |||| ||||||  ||||||    
T  11557369 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccagctaacaccttaaataggtttcattac 11557270  T
Q  150 tacc 153  Q
    ||||    
T  11557269 tacc 11557266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 11595123 - 11595020
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||||||  ||||||    
T  11595123 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 11595024  T
Q  150 tacc 153  Q
    ||||    
T  11595023 tacc 11595020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 15482785 - 15482887
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  15482785 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 15482883  T
Q  150 tacc 153  Q
    ||||    
T  15482884 tacc 15482887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 20461484 - 20461382
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  20461484 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 20461386  T
Q  150 tacc 153  Q
    ||||    
T  20461385 tacc 20461382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 856314 - 856394
Alignment:
Q  94 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 174  Q
    ||||| |||||  |||||| ||||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||    
T  856314 aacatctcatataagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 856394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 7793333 - 7793231
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| |||||  |||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  7793333 ttcaagtaatgcaatcaatcaacaaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 7793235  T
Q  150 tacc 153  Q
    ||||    
T  7793234 tacc 7793231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 14499450 - 14499552
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| ||| ||| |||||||  | |||||| || ||  |||||||||||||| ||||||| ||||||    
T  14499450 ttcaagtaatgcaatcaatcaataaatcacattataaacaa-ttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 14499548  T
Q  150 tacc 153  Q
    ||||    
T  14499549 tacc 14499552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 15877727 - 15877676
Alignment:
Q  135 tataggtcacattactacccaggggtccatctctaatcaaattatgcgacac 186  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacac 15877676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 2897803 - 2897718
Alignment:
Q  54 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatatagg 140  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  |||||||||||||| |||||    
T  2897803 agtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttaacagttaacatcttaaatagg 2897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 14179624 - 14179690
Alignment:
Q  104 aacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaa 170  Q
    ||||||||| ||||||  | ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14179624 aacagcttcacagattataattaacttcttatataggtcacaatactacccaggggtccatctctaa 14179690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 30066071 - 30066173
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  30066071 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 30066169  T
Q  150 tacc 153  Q
    ||||    
T  30066170 tacc 30066173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 42326074 - 42326177
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || ||| |||||| ||| ||||| |||| ||  |  |||||||||||||| ||||||  ||||||    
T  42326074 ttcaagtaatgcatttaatcgttaaatcacattacaaacaagttaacagttcttaacaacttcacaagtctcagttaacatcttaaataggtttcattac 42326173  T
Q  150 tacc 153  Q
    ||||    
T  42326174 tacc 42326177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 55022992 - 55023089
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||    
T  55022992 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcatta 55023089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 4589096 - 4589035
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  4589096 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 4589035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 5223182 - 5223243
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  5223182 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 5223243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 12339584 - 12339645
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  12339584 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 12339645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 15878032 - 15877947
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatctta 134  Q
    ||||||||||| |||||||||||| ||||||| ||| |||||  |||||| |||||||| | || ||||||||||||||| |||||    
T  15878032 ttcaagtaatgaaattaatcattatatcacatcatattcaacactaacatctcataacaacatcacagattgcagttaacttctta 15877947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 15964755 - 15964812
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15964755 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15964812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 15968679 - 15968736
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15968679 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15968736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 15972603 - 15972660
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  15972603 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 15972660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 19775551 - 19775612
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  19775551 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 19775612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 37439959 - 37439898
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  37439959 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 37439898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 11070193 - 11070295
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| ||||||   | |||||| || ||  |||||||||||||| ||||||| |||||     
T  11070193 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcgatatagcttcacaaataacagttaacatcttagataggtctcattag 11070291  T
Q  150 tacc 153  Q
    ||||    
T  11070292 tacc 11070295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 11854858 - 11854960
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| ||  |  |||||||||||||| ||||||| |||||     
T  11854858 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaattaacagttaacatcttagataggtctcattag 11854956  T
Q  150 tacc 153  Q
    ||||    
T  11854957 tacc 11854960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 11300753 - 11300692
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||| |||| || ||||||| || |||||||||||    
T  11300753 atttcgagtaatgcatttaatcattaaatcaaattacaaacaacttagcagttcataacagc 11300692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 15464983 - 15465044
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||||||    
T  15464983 atttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataacagc 15465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 11165513 - 11165411
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||  |||||||  | || ||| || ||  |||||||||||||| ||||||| |||||     
T  11165513 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttggcatttcaatatagtttcacaaataacagttaacatcttagataggtctcattag 11165415  T
Q  150 tacc 153  Q
    ||||    
T  11165414 tacc 11165411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 11300495 - 11300393
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||  ||  |  |||||||||||||| ||||||| |||||     
T  11300495 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagctttacaattaacagttaacatcttagataggtctcattag 11300397  T
Q  150 tacc 153  Q
    ||||    
T  11300396 tacc 11300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 14665531 - 14665570
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  14665531 atttcaagtaatgcatttaatcattaattcacattataat 14665570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 7109823 - 7109859
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  7109823 ttcaagtaatgcaatcaatcaataaatcacattataa 7109859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 7113758 - 7113794
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  7113758 ttcaagtaatgcaatcaatcaataaatcacattataa 7113794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 22321789 - 22321825
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  22321789 ttcaagtaatgcaatcaatcaataaatcacattataa 22321825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 22336844 - 22336880
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  22336844 ttcaagtaatgcaatcaatcaataaatcacattataa 22336880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 27409628 - 27409592
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  27409628 ttcaagtaatgcaatcaatcaataaatcacattataa 27409592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 28949849 - 28949885
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  28949849 ttcaagtaatgcaatcaatcaataaatcacattataa 28949885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 14110 - 13921
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    ||||||||||  ||| ||||||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14110 agatatcaaattaaatcaagcatcaactcaatcattcattcattaacatttcaagtaattcaattaatcattaaatcacattataatcaacttaacattt 14011  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 190  Q
    |||||||||||| |||||| ||||||||||| |||||||||||  |||||||||| |||||| |||||||  || |||||||||||||||    
T  14010 cataacagcttcacagatttcagttaacatcctatataggtcattttactacccaagggtccttctctaaataagttatgcgacacaggt 13921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 2925 - 3112
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| | ||||||| |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2925 agatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacattt 3024  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||| ||||||| | | ||||| | |||||||| |||||||||||||    
T  3025 cataacagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacag 3112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 6591 - 6778
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| | ||||||| |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6591 agatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcagcttaacattt 6690  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||| ||||||| | | ||||| | |||||||| |||||||||||||    
T  6691 cataacagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacag 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 7e-61; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 42865195 - 42865057
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42865195 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacctttcataacagcttcacagattgcagttaacatcttatataggtcacattac 42865096  T
Q  150 tacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  42865095 tacccaagggtccatctctaatcaaattatgcgacacag 42865057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 6151943 - 6152128
Alignment:
Q  3 atatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttca 102  Q
    |||||||| | ||||||| |||||||||||||||| |||  || |||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  6151943 atatcaaatagaagcaagtatcaactcaatcattcattcactaacatttcaagtaatgcaattaatcattaaatcacattataaacagcttaacatttca 6152042  T
Q  103 taacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||||||| | | ||||||| |||||||| | |||||||||||    
T  6152043 taacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacag 6152128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 22831410 - 22831224
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| | ||||||| ||||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  22831410 agatatcaaatagaagcaagtatcaactcagtcattcattcattaacatttcaagtaatgcaattaatcattaaatcacattataatcagc-taacattt 22831312  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||||||||||| | | ||||||| |||| ||| | |||||||||||    
T  22831311 cataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacacag 22831224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 21022728 - 21022899
Alignment:
Q  5 atcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcata 104  Q
    |||||| | ||||||| |||||||||||||| | ||  |||  ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  21022728 atcaaatagaagcaagtatcaactcaatcatccattaattaatatttcaagtaatgcaattaatcattaattcacattataatcagcttaacagttcata 21022827  T
Q  105 acagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaat 176  Q
    | |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||    
T  21022828 atagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccttaatcaaat 21022899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 22449252 - 22449126
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  22449252 atttcaagtaatgaaattaatcattaaatcacattataatcaacttaacagttcataacagcttcacagattgcagttaacatcttatatatgtcacatt 22449153  T
Q  148 actacccaggggtccatctctaatcaa 174  Q
    |||||| | ||||||||  ||||||||    
T  22449152 actacctaagggtccattcctaatcaa 22449126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 21714640 - 21714823
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacattt 100  Q
    ||||||||| |||| |||||| || ||||||||||| ||| | |    |||||||||||||||||| ||||| ||||||| ||| |||||  |||||| |    
T  21714640 gatatcaaataaaaacaagcaacatctcaatcattcattcataa----ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatct 21714735  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  21714736 cataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacag 21714823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 18182107 - 18181967
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||| ||| ||||||||||| ||||||| | ||||||||    
T  18182107 atttcaagtaatgcaattaatcattgaatcacattataaacaacttagcatctcataacagcttcacagtttgcagttaacttcttatacaagtcacatt 18182008  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | | ||||||| |||||||| |||||||||||||    
T  18182007 actacctaagagtccatccctaatcaatttatgcgacacag 18181967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 18393947 - 18393845
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  18393947 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattact 18393848  T
Q  151 acc 153  Q
    |||    
T  18393847 acc 18393845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 21788008 - 21787886
Alignment:
Q  69 cattaaatcacattataatcaactt-aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 167  Q
    ||||| || |||| ||||||||| | ||||||||||||||||| |  |||||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  21788008 cattatataacatcataatcaacatcaacatttcataacagctgcatagattgcagttaacttcttatataggttacattactacccaagggtccatctc 21787909  T
Q  168 taatcaaattatgcgacacaggt 190  Q
    ||| ||| |||||||||||||||    
T  21787908 taaacaagttatgcgacacaggt 21787886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 20091443 - 20091319
Alignment:
Q  64 ttaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtcc 162  Q
    |||||||||||| ||||| ||| ||||| |||||||  | |||||||||| ||||||||||||||| ||||| ||||||| |||||||||||| ||||||    
T  20091443 ttaatcattaaa-cacatcatattcaacattaacatcacgtaacagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtcc 20091345  T
Q  163 atctctaatcaaattatgcgacacag 188  Q
    ||||| ||||||||||||||||||||    
T  20091344 atctcaaatcaaattatgcgacacag 20091319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 45310350 - 45310248
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    ||||| |||||| |||||||||||||||||||| || || ||||||| |||||||||||||| |||||  |||||||||||||| ||||| |||||||||    
T  45310350 tcaagcaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggccacattact 45310251  T
Q  151 acc 153  Q
    |||    
T  45310250 acc 45310248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 3472911 - 3472807
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||| || |||||||||||||||||||  || ||||||| ||||||||||||||||| |||||| |  ||||||||||| ||||||||||||    
T  3472911 atttcaagtaattcatttaatcattaaatcacatttcaaacaacttagcatttcataacagcttcacagattcccattaacatctta-ataggtcacatt 3472813  T
Q  148 actacc 153  Q
    ||||||    
T  3472812 actacc 3472807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 8761616 - 8761526
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggt 141  Q
    |||||||||||||||||||| |||||||||| ||||| | ||||| | |||||||||||||| |||||| || ||||||||||||||||||    
T  8761616 tcaagtaatgcaattaatcaataaatcacatcataattagcttaatagttcataacagcttcacagatttcatttaacatcttatataggt 8761526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 24783084 - 24783001
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 134  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||| ||  || ||||||||||||||    
T  24783084 ttcaagtaatgcaattaattaataaatcacattataatc-acttagcatttcataacagcttcacaattttcagttaacatctta 24783001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 45489727 - 45489624
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||||||  ||||||    
T  45489727 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 45489628  T
Q  150 tacc 153  Q
    ||||    
T  45489627 tacc 45489624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 48603706 - 48603790
Alignment:
Q  104 aacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||| ||||||  | ||||| |||||||||||||||| ||||||| |||||||||||||||||||| | |||| ||||||    
T  48603706 aacagcttcacagattataattaacttcttatataggtcacaatactacctaggggtccatctctaatcaattcatgcaacacag 48603790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 3705049 - 3704946
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||| | ||| ||||| |||| |||||| | | |||||||||| ||||||  ||||||    
T  3705049 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaatagttcttaacaacttcacagattccggctaacatcttaaataggtttcattac 3704950  T
Q  150 tacc 153  Q
    ||||    
T  3704949 tacc 3704946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 16080428 - 16080326
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  |||||||  ||||| ||||||| |||||     
T  16080428 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataaaagcttcacagttctcagttaatctcttaaataggtctcattag 16080330  T
Q  150 tacc 153  Q
    ||||    
T  16080329 tacc 16080326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 17678573 - 17678488
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 134  Q
    ||||||||||||||| ||||||||||||| |||||| || |||||||||| |||| |||||| |  |||||| ||||||||||||||    
T  17678573 atttcaagtaatgcatttaatcattaaataacattacaaacaacttaacagttca-aacagccttacagatttcagttaacatctta 17678488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 1010845 - 1010947
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  1010845 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 1010943  T
Q  150 tacc 153  Q
    ||||    
T  1010944 tacc 1010947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 1925452 - 1925391
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  1925452 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 1925391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 20229132 - 20229071
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20229132 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20229071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 20924466 - 20924405
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20924466 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20924405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 33797674 - 33797757
Alignment:
Q  69 cattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    ||||| ||||||||||||||| |||||||||||| || |||||| ||| |  |||||||||||||| ||||||| ||||| ||||    
T  33797674 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcattagtacc 33797757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 36819292 - 36819190
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    |||||| |||||||| ||| | ||||||||| |||||||| ||||||||||||||| |||||| ||| |  || |||| |||||| ||||||| |||||     
T  36819292 ttcaagaaatgcaatcaataaataaatcacaatataatca-cttaacatttcataaaagcttcacagttctcatttaatatcttaaataggtctcattag 36819194  T
Q  150 tacc 153  Q
    ||||    
T  36819193 tacc 36819190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 22468592 - 22468543
Alignment:
Q  138 aggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 187  Q
    ||||| || ||||||||| |||||||||||||||| ||||||||||||||    
T  22468592 aggtctcaatactacccaagggtccatctctaatcgaattatgcgacaca 22468543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 33797408 - 33797461
Alignment:
Q  56 taatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  33797408 taatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 33797461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 16375442 - 16375406
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  16375442 ttcaagtaatgcaatcaatcaataaatcacattataa 16375406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 20228793 - 20228757
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  20228793 ttcaagtaatgcaatcaatcaataaatcacattataa 20228757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 21407477 - 21407513
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  21407477 ttcaagtaatgcaatcaatcaataaatcacattataa 21407513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 22507916 - 22507876
Alignment:
Q  206 gctatgtttgagagacctgattaccatatgaagagtcatct 246  Q
    |||||||| |||||||||||||| |||||||| ||||||||    
T  22507916 gctatgttcgagagacctgattatcatatgaatagtcatct 22507876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 52639663 - 52639699
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  52639663 ttcaagtaatgcaatcaatcaataaatcacattataa 52639699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 7111 - 6924
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| | | ||||  |||||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  7111 agatatcaaatagaggcaaatatcaactcaatcattcattcattaacatctcaagtaatgcaattaatcattaaatctcattataatcagcttaacattt 7012  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||| | |||||||||||    
T  7011 cataacagcttcacagattgcagttaacatcttatataggtcacattactacctaagggcccatccctaatcaactcatgcgacacag 6924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 109; Significance: 7e-55; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 14757 - 14945
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatt 99  Q
    |||||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| ||| |  | |||| ||| ||||| ||||||||    
T  14757 agatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatt 14856  T
Q  100 tcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||||||| ||||||||||||||| |||| |||||||  |||||||||||||| ||||||||||||||||||||||||||||||    
T  14857 tcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggagtccatctctaatcaaattatgcgacacag 14945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 23772 - 23960
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatt 99  Q
    |||||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| ||| |  | |||| ||| ||||| ||||||||    
T  23772 agatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatt 23871  T
Q  100 tcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||||||| ||||||||||||||| |||| |||||||  |||||||||||||| |||||||||| |||||||||||||||||||    
T  23872 tcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacag 23960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 39196 - 39384
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatt 99  Q
    |||||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| ||| |  | |||| ||| ||||| ||||||||    
T  39196 agatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatt 39295  T
Q  100 tcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||||||| ||||||||||||||| |||| |||||||  |||||||||||||| |||||||||| |||||||||||||||||||    
T  39296 tcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacag 39384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 46713 - 46573
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  46713 atttcaagtaatgcaattaatcattaaatcacattataatcaacttagcatttcataacagcttcacagattgcagttaacttcttatataggtcacatt 46614  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | | ||||||| |||||||| |||||||||||||    
T  46613 actacctaagagtccatccctaatcaatttatgcgacacag 46573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 24673662 - 24673849
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt 100  Q
    |||||||||| | ||||||| |||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  24673662 agatatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcacagtataatcagcttaacattt 24673761  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||| |||||| ||||| ||| |||||||| ||||||||||||||||||||  | | ||||| | |||||||| |||||||||||||    
T  24673762 cataatagcttcacagatcgcaattaacatcctatataggtcacattactacttaagagtccaaccctaatcaatttatgcgacacag 24673849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 22740945 - 22740806
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||| ||||  |||||||||||||| ||||||||||||| |||||    
T  22740945 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacaacttcaaagattgcagttaacttcttatataggtctcatta 22740846  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  22740845 ctacccaagggtccatctctaatcaaattatgcgacacag 22740806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 22758700 - 22758561
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||||||||  |||||||||||||  ||||||||||||| |||||    
T  22758700 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgcagttaatttcttatataggtctcatta 22758601  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  22758600 ctacccaagggtccatctctaatcaaattatgcgacacag 22758561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 22799092 - 22798972
Alignment:
Q  69 cattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 167  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22799092 cattatatcacatcatattcaacattaacatttcataacagcttcacaaattgcagttaacttcttatataggtcacattactacccaggggtccatctc 22798993  T
Q  168 taatcaaattatgcgacacag 188  Q
    |||||||||||||||||||||    
T  22798992 taatcaaattatgcgacacag 22798972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 21918288 - 21918162
Alignment:
Q  62 aattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtc 161  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||| |||||||||||||| |||||||||||||||||| | |||||    
T  21918288 aattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtc 21918189  T
Q  162 catctctaatcaaattatgcgacacag 188  Q
    || |  ||||||| |||||||| ||||    
T  21918188 caaccataatcaatttatgcgaaacag 21918162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 23038125 - 23038308
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacattt 100  Q
    ||||||||| |||| |||||| || ||||||||||| ||| | |    |||||||||| ||||||| ||||| ||||||| ||| | |||  |||||| |    
T  23038125 gatatcaaataaaaacaagcaacatctcaatcattcattcataa----ttcaagtaattcaattaaacattatatcacatcatatttaacactaacatct 23038220  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||| |||||| |||||||||| |||| ||||||||||||| || ||||||||| |||||||||||||||||||| |||||||||||    
T  23038221 cataagagcttcacagattgcagataacttcttatataggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacag 23038308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 25963702 - 25963571
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||||||| |||||| || ||||||||||| ||||||||||||    
T  25963702 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcttcacagatttcaattaacatcttaaataggtcacatt 25963604  T
Q  148 actacccaggggtccatctctaatcaaattatg 180  Q
    |||||| | ||||||| | |||||||| |||||    
T  25963603 actacctaagggtccaaccctaatcaacttatg 25963571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 180
Target Start/End: Complemental strand, 22811896 - 22811765
Alignment:
Q  50 ttcaagtaatgcaatt-aatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||| | |||||| ||||||| |||||| || ||||||||||| |||||||||||||    
T  22811896 ttcaggtaatgcaatttaatcattaaatcacattataatcaacttaatagttcatagcagcttcacagatttcacttaacatcttaaataggtcacatta 22811797  T
Q  149 ctacccaggggtccatctctaatcaaattatg 180  Q
    ||||| |  |||||| | |||||||| |||||    
T  22811796 ctacctaaaggtccaacactaatcaatttatg 22811765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 40428597 - 40428700
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||||||| |||||  |||||||||||||| |||||||||||||||    
T  40428597 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattact 40428696  T
Q  151 accc 154  Q
    ||||    
T  40428697 accc 40428700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 23103381 - 23103253
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    ||||||| |||||||||| ||||| ||||||| | |  ||||  |||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  23103381 ttcaagtcatgcaattaaacattatatcacatcaaatccaacactaacatctcataacagcttcacagattgcagttaacttcttatataggtctcatta 23103282  T
Q  149 ctacccaggggtccatctctaatcaaatt 177  Q
    ||||| | |||||||||||||||||||||    
T  23103281 ctaccaaagggtccatctctaatcaaatt 23103253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 23019666 - 23019552
Alignment:
Q  75 atcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatca 173  Q
    ||||||| ||| ||||| |||||||||||||| |||||| || ||||||  |||| |||||||||||||||||||||||||| ||||||| ||||||| |    
T  23019666 atcacatcatattcaacattaacatttcataaaagcttcacaaattgcaaataacttcttatataggtcacattactacccaagggtccaactctaatta 23019567  T
Q  174 aattatgcgacacag 188  Q
    |||||||||||||||    
T  23019566 aattatgcgacacag 23019552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 40622148 - 40622054
Alignment:
Q  94 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||| ||||||| ||||    
T  40622148 aacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaaacaaaatatgcgaaacag 40622054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 45678150 - 45678074
Alignment:
Q  4 tatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcaca 80  Q
    ||||||| | ||||||| |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||    
T  45678150 tatcaaatagaagcaagtatcaactcaatcattcattcattaacatttcaagtaatgcaattaatcattaaatcaca 45678074  T

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Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 25961518 - 25961416
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||| |||||||||  ||| || ||||||| |||||||||| ||||||  ||||||    
T  25961518 ttcaagtaatgcatttaatcattaaatcacattacaa-caacttaacagttcataacaaattcacatattgcagctaacatcttaaataggtttcattac 25961420  T
Q  150 tacc 153  Q
    ||||    
T  25961419 tacc 25961416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 19688740 - 19688638
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  19688740 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 19688642  T
Q  150 tacc 153  Q
    ||||    
T  19688641 tacc 19688638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 24174932 - 24175035
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| | | |||||||||| ||||||  ||||||    
T  24174932 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacatcttaaataggtttcattac 24175031  T
Q  150 tacc 153  Q
    ||||    
T  24175032 tacc 24175035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 24655323 - 24655220
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| | | |||||||||| ||||||  ||||||    
T  24655323 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacatcttaaataggtttcattac 24655224  T
Q  150 tacc 153  Q
    ||||    
T  24655223 tacc 24655220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 37524820 - 37524929
Alignment:
Q  70 attaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctcta 169  Q
    |||||||||||||||||||| | ||||| |||||| ||||||| |||| | || ||||||||||| |||||||||||||||||| | ||||||| |  ||    
T  37524820 attaaatcacattataatcagcctaacagttcatagcagcttcacagacttcaattaacatctta-ataggtcacattactacctaagggtccaacctta 37524918  T
Q  170 atcaaattatg 180  Q
    ||||| |||||    
T  37524919 atcaacttatg 37524929  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 24735525 - 24735627
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    |||||||||||| || ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  24735525 ttcaagtaatgcgatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 24735623  T
Q  150 tacc 153  Q
    ||||    
T  24735624 tacc 24735627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 45678075 - 45678001
Alignment:
Q  114 cagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||| |||||||| ||||||||||||||||||||| | | ||||||| |||||||| | |||||||||||    
T  45678075 cagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacag 45678001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 21327550 - 21327449
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||||||||||| |||||||||| |||| || ||||| | |||||||||||||| |||| | || ||||||| ||| ||| ||| || ||||    
T  21327550 tcaagtaatgcaattaatcaataaatcacatcataaacagcttaatagttcataacagcttcacagaattcacttaacattttaaatatgtctcactact 21327451  T
Q  151 ac 152  Q
    ||    
T  21327450 ac 21327449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 10101629 - 10101527
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  10101629 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 10101531  T
Q  150 tacc 153  Q
    ||||    
T  10101530 tacc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 24716510 - 24716412
Alignment:
Q  54 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    ||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| || ||| || |||||||||||||| ||||||| || |||||||    
T  24716510 agtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctcacaggtttcagttaacatcttaaataggtctcactactacc 24716412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 41531321 - 41531266
Alignment:
Q  54 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  41531321 agtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 41531266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 21318619 - 21318518
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||||||||||| |||||||||| |||| || ||||| | |||||| ||||||| || | | || ||||||||||| ||| ||| || ||||    
T  21318619 tcaagtaatgcaattaatcaataaatcacatcataaacagcttaatagttcatagcagcttcacataattcacttaacatcttaaatatgtctcactact 21318520  T
Q  151 ac 152  Q
    ||    
T  21318519 ac 21318518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 30345314 - 30345253
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  30345314 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 30345253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 1283172 - 1283233
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||| |||||||||| || ||||||| || |||||||||||    
T  1283172 atttcgagtaatgcatttaatcatttaatcacattacaaacaacttagcagttcataacagc 1283233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 31344995 - 31345056
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||| ||||||||||| || ||||||| || |||||||||||    
T  31344995 atttcgagtaatgcatttaatcatgaaatcacattacaaacaacttagcagttcataacagc 31345056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 24870016 - 24870115
Alignment:
Q  54 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    ||||||| | |||||| ||||||||||||| || ||||||| || ||| ||||| | || |||||| | | |||||||||| ||||||  ||||||||||    
T  24870016 agtaatgtatttaatcgttaaatcacattacaaacaacttagcagttcttaacaacctcacagattccggctaacatcttaaataggtttcattactacc 24870115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 12901496 - 12901460
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  12901496 ttcaagtaatgcaatcaatcaataaatcacattataa 12901460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 15477725 - 15477761
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  15477725 ttcaagtaatgcaatcaatcaataaatcacattataa 15477761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 24649479 - 24649515
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  24649479 ttcaagtaatgcaatcaatcaataaatcacattataa 24649515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 27601918 - 27601954
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  27601918 ttcaagtaatgcaatcaatcaataaatcacattataa 27601954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 41530994 - 41530958
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  41530994 ttcaagtaatgcaatcaatcaataaatcacattataa 41530958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 14079283 - 14079421
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||    
T  14079283 tcaagtaatgcaattaatcattaaatcacatcatattcaacattaacatttcataagagcttcacagattgcagttaacttcttaaataggtcacattac 14079382  T
Q  150 tacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14079383 tacccaggggtccatctctaatcaaattatgcgacacag 14079421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 2 - 188
Target Start/End: Complemental strand, 23501378 - 23501191
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacattt 100  Q
    ||||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| ||| |  |||||| ||| ||||| |||||| ||    
T  23501378 gatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatctcacatcatattcaacattaacaatt 23501279  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||||||    
T  23501278 cataacagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctctaatcaacttatacgacacag 23501191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 23201454 - 23201642
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacattt 100  Q
    ||||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||| ||| |  |||| | ||| ||||| |||||| ||    
T  23201454 gatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtaatgcaattaaacatcatctcacgtcatattcaacattaacaatt 23201553  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattacta-cccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||||||||||||| |||| |||||||| |||||||| |||| |||||||||||||| |||||||||||||||||    
T  23201554 cataacagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaattatgcgacacag 23201642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 21366652 - 21366512
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||  |||||||||||||| ||||||||||||    
T  21366652 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacatt 21366553  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  21366552 actacctaagggtccaaccctaatcaatttatgcgaaacag 21366512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 23512191 - 23512380
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccattt-caagtaatgcaattaatcattaaatcacattataatcaac-ttaacat 98  Q
    |||||||||| |||||||||||||| ||||||||||| ||| ||| ||||| |||||||||||||||| ||| | || |||| ||| ||||| |||||||    
T  23512191 agatatcaaataaaagcaagcatcatctcaatcattcattcattaacattttcaagtaatgcaattaaacatcatattacatcatattcaacattaacat 23512290  T
Q  99 ttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    || |||| | ||||  |||||||||| ||| |||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||    
T  23512291 tttataagatcttcaaagattgcagtaaacttcttatataggtcataatactacccaagggtccacctctaatcaaattatgcgacacag 23512380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 21873402 - 21873522
Alignment:
Q  69 cattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 167  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||    
T  21873402 cattatatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggttcatctc 21873501  T
Q  168 taatcaaattatgcgacacag 188  Q
    |||||||||||||||||||||    
T  21873502 taatcaaattatgcgacacag 21873522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 37724038 - 37724177
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||||||| ||||| ||||||| ||| |||||  |||||| ||| ||||||||| ||||||||||||||| ||||||||||||| || ||    
T  37724038 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcaaaacagcttcacagattgcagttaacttcttatataggtctcaata 37724137  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||| | ||||||||||||||||||||||||||||||||    
T  37724138 ctaccgaagggtccatctctaatcaaattatgcgacacag 37724177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 26704244 - 26704339
Alignment:
Q  93 taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| |||||||||| |||||||||||    
T  26704244 taacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacag 26704339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 26973977 - 26974072
Alignment:
Q  93 taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| |||||||||| |||||||||||    
T  26973977 taacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacag 26974072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 20805680 - 20805820
Alignment:
Q  47 catttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacat 146  Q
    |||||||||||||||| ||||||||||||||||||||  |  |||||| || |||| |||||| || |||||| |||||||||||||| |||||||||||    
T  20805680 catttcaagtaatgcatttaatcattaaatcacattaccaataacttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtcacat 20805778  T
Q  147 tactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| | ||||| | | |||||||| || ||||||||||    
T  20805779 tactacctaagggtcaaaccctaatcaatttgtgcgacacag 20805820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 20767102 - 20767207
Alignment:
Q  47 catttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacat 146  Q
    |||||||||||||||| ||||||||||||||||||||  | |||||||  | |||| |||||| || |||||| |||||||||||||| |||||||||||    
T  20767102 catttcaagtaatgcatttaatcattaaatcacattaccaacaacttagtagttca-aacagcctcacagatttcagttaacatcttaaataggtcacat 20767200  T
Q  147 tactacc 153  Q
    |||||||    
T  20767201 tactacc 20767207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 23458721 - 23458825
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| || |||||| |||||||||||||| ||||||| || |    
T  23458721 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtctcact 23458819  T
Q  148 actacc 153  Q
    ||||||    
T  23458820 actacc 23458825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 23462982 - 23463086
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| || |||| |||||| || |||||| |||||||||||||| ||||||| || |    
T  23462982 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtctcact 23463080  T
Q  148 actacc 153  Q
    ||||||    
T  23463081 actacc 23463086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 18769944 - 18769864
Alignment:
Q  94 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 174  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||    
T  18769944 aacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 18769864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 22032507 - 22032575
Alignment:
Q  106 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 174  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||||||| | ||||||||||||||||||    
T  22032507 cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatctctaatcaa 22032575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 123289 - 123187
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || || ||||||| ||||||||||| || |||||  |||||||||||| | |||||||| |||||    
T  123289 ttcaagtaatgcatttaatctttaaatcacattacaa-cagcttaacaattcataacagcctcacagatctcagttaacatctcacataggtcatattac 123191  T
Q  150 tacc 153  Q
    ||||    
T  123190 tacc 123187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 12028549 - 12028446
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||||||  ||||||    
T  12028549 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 12028450  T
Q  150 tacc 153  Q
    ||||    
T  12028449 tacc 12028446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 23451477 - 23451581
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||| ||||||||| ||| || ||||||| || |||| |||||| || |||||| |||||||||||||| ||||||| || |    
T  23451477 atttcaagtaatgcatttaatcgttaaatcactttacaaacaacttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtctcact 23451575  T
Q  148 actacc 153  Q
    ||||||    
T  23451576 actacc 23451581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 24222009 - 24222112
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| | | |||| ||||| ||||||  ||||||    
T  24222009 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacgtcttaaataggtttcattac 24222108  T
Q  150 tacc 153  Q
    ||||    
T  24222109 tacc 24222112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 23572215 - 23572338
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaa-catttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||  ||| ||||| |  |||| |||||||||| || ||| ||||| || |||| || |||||||||||| ||||||||||||| |||||    
T  23572215 ttcaagtaatgca--taaacattataatacatcataatcaactcaaacatctcatatcaacttcacaaattgcagttaacttcttatataggtctcatta 23572312  T
Q  149 ctacccaggggtccatctctaatcaa 174  Q
    ||||| | ||||||||| ||||||||    
T  23572313 ctacctaagggtccatccctaatcaa 23572338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 11220531 - 11220592
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11220531 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11220592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 11225117 - 11225178
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11225117 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11225178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 11228940 - 11229001
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11228940 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11229001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 11230929 - 11230990
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  11230929 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 11230990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 22757258 - 22757349
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggt 141  Q
    ||||||||||||| |||||| ||||||||||||| || ||||||| || ||| ||||| |||| ||| |  |||||||||||||| ||||||    
T  22757258 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcagttcttaacaacttcacaggtctcagttaacatcttaaataggt 22757349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 11226950 - 11227011
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||| ||||    
T  11226950 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcatatcagc 11227011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 18356075 - 18356136
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  18356075 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 18356136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 20911158 - 20911097
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20911158 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20911097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 10753147 - 10753206
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataaca 107  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||    
T  10753147 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataaca 10753206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 15236764 - 15236662
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  15236764 ttcaagtaatgcaatcaattaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 15236666  T
Q  150 tacc 153  Q
    ||||    
T  15236665 tacc 15236662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 18356468 - 18356546
Alignment:
Q  69 cattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    ||||| ||||||||||||||| |||||||||||| || |||||| ||| |  |||||||||||||| ||||||| |||||    
T  18356468 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcatta 18356546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 40723904 - 40723849
Alignment:
Q  54 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  40723904 agtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 40723849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 17919134 - 17919078
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacag 108  Q
    |||||||||||| |||||| ||||||||||||| || |||||||||| ||||||||||    
T  17919134 tcaagtaatgcatttaatctttaaatcacattacaa-caacttaacaattcataacag 17919078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 17410562 - 17410602
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaa 90  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  17410562 ttcaagtaatgcaatcaatcaataaatcacattataatcaa 17410602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 24767532 - 24767493
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  24767532 atttcaagtaatgcatttaatcattaattcacattataat 24767493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 31342258 - 31342301
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaactt 93  Q
    |||||||||||||||||||| ||||||||||||| || ||||||    
T  31342258 ttcaagtaatgcaattaatcgttaaatcacattacaaacaactt 31342301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 20295969 - 20296005
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  20295969 ttcaagtaatgcaatcaatcaataaatcacattataa 20296005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 12321728 - 12321588
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  12321728 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacagttcataacagtttcacagattgcagttaacatcttatataggtcacatt 12321629  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | | ||||||| |||||||| | |||||||||||    
T  12321628 actacctaagagtccatccctaatcaattcatgcgacacag 12321588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 9703357 - 9703538
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacattt 100  Q
    ||||||||| ||||| | |||||| ||||||||||| ||| | |    |||||||||||||||||| | | |  |||||| ||||||||| |||||||||    
T  9703357 gatatcaaataaaagtatgcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacgtaatctcacatcataatcaacattaacattt 9703452  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacac 186  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  9703453 cataacagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacac 9703538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 14430012 - 14430152
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||  |||||||||||||| ||||||||||||    
T  14430012 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacatt 14430111  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||| | |||||||| |||||||| ||||    
T  14430112 actacctaagggtccaaccctaatcaatttatgcgaaacag 14430152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 24054560 - 24054742
Alignment:
Q  3 atatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttc 101  Q
    |||||||  |||||||||||||| ||||||| ||| ||| | |    ||||||||||| | |||| ||| | ||||||| |||||||||  |||||| ||    
T  24054560 atatcaattaaaagcaagcatcatctcaatctttcattcataa----ttcaagtaatgtatttaaacatcatatcacatcataatcaacactaacatctc 24054655  T
Q  102 ataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||||| |||||||||||||||  |||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||    
T  24054656 ataacagcttcacagattgcagttaactccttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacag 24054742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 18154821 - 18154682
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||||||| ||||| ||| ||| ||| ||||| ||||||| ||||||||||||| || |||||||||||| ||||||||||||| |||||    
T  18154821 ttcaagtaatgcaattaaacattatatcgcatcatattcaacattaacatctcataacagcttcacatattgcagttaacttcttatataggtctcatta 18154722  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||  ||||||||| ||||||||| |||||||||||    
T  18154721 ctacccaatggtccatctttaatcaaatcatgcgacacag 18154682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 19649469 - 19649330
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||||||||||||| ||||||| ||| |||||  ||||||  | |||| ||||| ||||||||||||||| ||| || |||||| || ||    
T  19649469 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatcacttaactgcttcacagattgcagttaacttctaatttaggtctcaata 19649370  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  19649369 ctacccaagggtccatctctaatcaaattatgcgacacag 19649330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 3271955 - 3272058
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||| | |||||||||||||| || ||| || ||||||||||||||||||| || |||    
T  3271955 ttcaagtaatgcaattaatcagtaaatcacatcataatcagcttaatagttcataacagcttcacatatttcatttaacatcttatataggtctcactac 3272054  T
Q  150 tacc 153  Q
    ||||    
T  3272055 tacc 3272058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 11880459 - 11880525
Alignment:
Q  121 cagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 187  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  11880459 cagttaacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacaca 11880525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 12318249 - 12318351
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  12318249 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttaacatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 12318347  T
Q  150 tacc 153  Q
    ||||    
T  12318348 tacc 12318351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 15605256 - 15605154
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  15605256 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttaacatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 15605158  T
Q  150 tacc 153  Q
    ||||    
T  15605157 tacc 15605154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 17138003 - 17137923
Alignment:
Q  94 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 174  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||    
T  17138003 aacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 17137923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 11312770 - 11312872
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  11312770 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 11312868  T
Q  150 tacc 153  Q
    ||||    
T  11312869 tacc 11312872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 16583378 - 16583479
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||| |||||||||| |||||| ||| |  ||||||| |||||||||||||| |||||     
T  16583378 ttcaagtaatgcaatcaatcat-aaatcacattataatca-cttagcatttcataatagcttcacagttctcagttaatatcttatataggtctcattag 16583475  T
Q  150 tacc 153  Q
    ||||    
T  16583476 tacc 16583479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 12187205 - 12187273
Alignment:
Q  106 cagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 174  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||||||| |  |||||||||||||||||    
T  12187205 cagcttcacagattgcagttaacttcttatataggtctcattactacctaatggtccatctctaatcaa 12187273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 15580813 - 15580904
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtc 142  Q
    ||||||||||||||| ||| | ||||||||||||||||| ||||| |||||||||| |||||| ||| || ||||||||||| || |||||||    
T  15580813 ttcaagtaatgcaatcaattaataaatcacattataatc-acttagcatttcataatagcttcacagttttcagttaacatcctaaataggtc 15580904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 33229 - 33331
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| ||||||    
T  33229 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 33327  T
Q  150 tacc 153  Q
    ||||    
T  33328 tacc 33331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 70749 - 70647
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| ||||||    
T  70749 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 70651  T
Q  150 tacc 153  Q
    ||||    
T  70650 tacc 70647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 74858 - 74756
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| ||||||    
T  74858 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattac 74760  T
Q  150 tacc 153  Q
    ||||    
T  74759 tacc 74756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 9446143 - 9446040
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| | | |||||||||| ||| ||  ||||||    
T  9446143 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccggctaacatcttaaatatgtttcattac 9446044  T
Q  150 tacc 153  Q
    ||||    
T  9446043 tacc 9446040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 15083979 - 15084040
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  15083979 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 15084040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 2760265 - 2760347
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatctta 134  Q
    |||||||||||| |||||||||||||||||||| || ||||||| || || | |||||| || |||||| ||||||||||||||    
T  2760265 tcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttta-aacagcctcacagatttcagttaacatctta 2760347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 13635453 - 13635351
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  | ||||| |||||| ||||| | |||||     
T  13635453 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctctgttaatatcttaaataggcctcattag 13635355  T
Q  150 tacc 153  Q
    ||||    
T  13635354 tacc 13635351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 20569580 - 20569477
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||  |  ||| |||||||||| ||||||  ||||||    
T  20569580 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacatgtatcagctaacatcttaaataggtttcattac 20569481  T
Q  150 tacc 153  Q
    ||||    
T  20569480 tacc 20569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 39722049 - 39722110
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  39722049 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 39722110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 45170329 - 45170272
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataa 105  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||    
T  45170329 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataa 45170272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 18454045 - 18454085
Alignment:
Q  206 gctatgtttgagagacctgattaccatatgaagagtcatct 246  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  18454045 gctatgtttgagagacctgattaccatatgaagattcatct 18454085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 25927490 - 25927431
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataaca 107  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||    
T  25927490 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataaca 25927431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 1859073 - 1859012
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||||||    
T  1859073 atttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataacagc 1859012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 13918767 - 13918706
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||| || || ||||||| || |||||||||||    
T  13918767 atttcgagtaatgcatttaatcattaaatcacactacaaacaacttagcagttcataacagc 13918706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 42205257 - 42205338
Alignment:
Q  72 taaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    |||||||||||| ||  | ||||| | |||||||||||||| ||| |  |||||||||||| | ||||||||||||||||||    
T  42205257 taaatcacattacaaatagcttaataattcataacagcttcacaggtctcagttaacatctcaaataggtcacattactacc 42205338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 39722388 - 39722424
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||||||||| |||||||||||||||    
T  39722388 ttcaagtaatgcaattaatcaataaatcacattataa 39722424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 2530371 - 2530316
Alignment:
Q  54 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||||||| |||||||||||||||||||| || ||||||| || ||||| |||||    
T  2530371 agtaatgcatttaatcattaaatcacattacaaacaacttagcagttcatgacagc 2530316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 2832428 - 2832389
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  2832428 atttcaagtaatgcatttaatcattaattcacattataat 2832389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 9751742 - 9751703
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  9751742 atttcaagtaatgcatttaatcattaattcacattataat 9751703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 39267886 - 39267847
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  39267886 atttcaagtaatgcatttaatcattaattcacattataat 39267847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 12714986 - 12715022
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  12714986 ttcaagtaatgcaatcaatcaataaatcacattataa 12715022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 12718790 - 12718826
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  12718790 ttcaagtaatgcaatcaatcaataaatcacattataa 12718826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 12723701 - 12723737
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  12723701 ttcaagtaatgcaatcaatcaataaatcacattataa 12723737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 16114363 - 16114399
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  16114363 ttcaagtaatgcaatcaatcaataaatcacattataa 16114399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 16117516 - 16117552
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  16117516 ttcaagtaatgcaatcaatcaataaatcacattataa 16117552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 16907185 - 16907149
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  16907185 ttcaagtaatgcaatcaatcaataaatcacattataa 16907149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 18279525 - 18279561
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  18279525 ttcaagtaatgcaatcaatcaataaatcacattataa 18279561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 18283488 - 18283524
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  18283488 ttcaagtaatgcaatcaatcaataaatcacattataa 18283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 2 - 188
Target Start/End: Complemental strand, 15698 - 15515
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacattt 100  Q
    ||||||||| | |||||||||||| ||||||||||| ||| | |    ||||||||||||||||||||||||  |||||| ||| ||||| |||||||||    
T  15698 gatatcaaatataagcaagcatcatctcaatcattcattcataa----ttcaagtaatgcaattaatcattatctcacatcatattcaacattaacattt 15603  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||    
T  15602 cataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattaagcgacacag 15515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 3877 - 4003
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  3877 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaatatcttatataggtcacattac 3976  T
Q  150 tacccaggggtccatctctaatcaaat 176  Q
    |||||| ||||||||||||||||||||    
T  3977 tacccaagggtccatctctaatcaaat 4003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 51 - 176
Target Start/End: Original strand, 8308 - 8434
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  8308 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaatatcttatataggtcacattac 8407  T
Q  150 tacccaggggtccatctctaatcaaat 176  Q
    |||||| ||||||||||||||||||||    
T  8408 tacccaagggtccatctctaatcaaat 8434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 6188 - 6376
Alignment:
Q  1 agatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatt 99  Q
    |||||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||| ||||||||||| ||| |  | |||| ||| ||||| ||||||||    
T  6188 agatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagaaatgcaattaaacatcatcttacatcatattcaacattaacatt 6287  T
Q  100 tcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||||||| ||||||||||||||| |||| |||||||  | ||||||||||||| |||||||||||||||||||||||||||||    
T  6288 tcataacagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaaattatgcgacacag 6376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 51 - 187
Target Start/End: Complemental strand, 18437 - 18300
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    |||||||||||||||| || ||||||||||| ||| ||||| ||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  18437 tcaagtaatgcaattattcgttaaatcacatcatattcaacattaacatttcataacagcttcacagattgtagttaacttcttaaataggtcacattac 18338  T
Q  150 tacccaggggtccatctctaatcaaattatgcgacaca 187  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18337 tacccaggggtccatctctaatcaaattatgcgacaca 18300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 187
Target Start/End: Original strand, 18330 - 18512
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacattt 100  Q
    ||||||||| ||||| | |||||| ||||||||||| ||| | |    |||||||||||||||||| | | |  |||||| ||||||||| |||||||||    
T  18330 gatatcaaataaaagtatgcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacgtaatctcacatcataatcaacattaacattt 18425  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 187  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18426 cataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 18512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 290 - 430
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||| | ||||||||||||  |||||||||||    
T  290 atttcaagtaatgcaattagtcattaaatcacattataatcaacttaacagttcataacagcttcacagatttccgttaacatcttaattaggtcacatt 389  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||||| |||||||| |||||||||||||    
T  390 actacctaagggtccatccctaatcaatttatgcgacacag 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 69930 - 70069
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||||||||||||| ||||||| ||| |||||  |||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||    
T  69930 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcataacagcttcacagattgcagttaacttcttatataggtctcatta 70029  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  70030 ctacccaagggtccatctctaatcaaattatgcgacacag 70069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 10568 - 10471
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||  ||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||    
T  10568 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagtatttcataatagcttcacagttctcagttaatatcttaaataggtctcatta 10471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 32570 - 32707
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||| | ||||||| ||||    
T  32570 tcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaattaacatttta-aaaggtcactttac 32668  T
Q  150 tacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  32669 tacccaggggtccaactctaaacaaattatgcgacacag 32707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 48 - 187
Target Start/End: Complemental strand, 6295 - 6156
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||| ||||||||| |||||||| || |||| |||||||    
T  6295 atttcaagtaatgcaattaataattaaatcacaatataaacaacttaacatttcataatagcttcacagattgcatttaacatcctaaatagatcacatt 6196  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacaca 187  Q
    |||||  |||||||||||||||||||| ||||||||||||    
T  6195 actacttaggggtccatctctaatcaagttatgcgacaca 6156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 21555 - 21415
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| ||||||| || ||| |||||||||||||| ||||||||||||    
T  21555 atttcaagtaatacaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacaaatttcagttaacatcttaaataggtcacatt 21456  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||||| |||||||| |||||||| ||||    
T  21455 actacctaagggtccatccctaatcaatttatgcgaaacag 21415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 80677 - 80616
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| || |||||| |||||||||||||||||||| |  ||||||| || |||||||||||    
T  80677 atttcgagcaatgcatttaatcattaaatcacattacagacaacttagcagttcataacagc 80616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 18642 - 18516
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  18642 atttcaagtaatggaattaatcattaaatcacattataatcaacataccatttcataacagcttcacagattgcagttaacttcttatataggtctcatt 18543  T
Q  148 actacccaggggtccatctctaatcaa 174  Q
    |||||| | ||||||||| | ||||||    
T  18542 actacctaagggtccatcccaaatcaa 18516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 1623 - 1756
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||  |||||||||||||| ||||||||||||    
T  1623 atttcaagtaatgcaattaatcattaaatcacattataatcagcttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacatt 1722  T
Q  148 actacccaggggtccatctctaatcaaattatgc 181  Q
    |||||| | ||||||| | |||||||| ||||||    
T  1723 actacctaagggtccaaccctaatcaatttatgc 1756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 1474 - 1613
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||||||||||||| ||||||| ||| |||||  |||||| | |||||||||||| |||||||| ||||| ||||||||||||| || ||    
T  1474 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctaataacagcttcgtagattgcatttaacttcttatataggtctcaata 1573  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  1574 ctacccaagggtccatctctaatcaaattatgcgacacag 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 15216 - 15321
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| ||||| || |    
T  15216 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaactttttataacagcttcacagattgcagttaacatcttataaaggtctcact 15315  T
Q  148 actacc 153  Q
    ||||||    
T  15316 actacc 15321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 188
Target Start/End: Original strand, 20075 - 20256
Alignment:
Q  3 atatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttc 101  Q
    |||||||| |||| ||||||||| ||||||||||| ||| | |    |||||||||||||||||| ||||| ||||||| ||| |||||  |||||| ||    
T  20075 atatcaaataaaa-caagcatcatctcaatcattcattcataa----ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctc 20169  T
Q  102 ataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||| |||||||||||    
T  20170 ataacagcttcacaggttgcagttaacttcttatataggtctcattactacccaagggtccatccctaatcaaatcatgcgacacag 20256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 190
Target Start/End: Complemental strand, 8986 - 8801
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaactt-aacattt 100  Q
    ||||||||| | |||||||||||| ||||||||||| ||| | |    ||||||||||| ||| || ||| |  |||||| ||| ||||| | |||||||    
T  8986 gatatcaaatacaagcaagcatcatctcaatcattcattcataa----ttcaagtaatgaaatcaaacatcatctcacatcatattcaacatcaacattt 8891  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggt 190  Q
    |||||||||||| |||||| |||||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||    
T  8890 cataacagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacaggt 8801  T

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Target: scaffold0096 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 16315 - 16195
Alignment:
Q  69 cattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 167  Q
    ||||| ||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||    
T  16315 cattatatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcatattactacccaagggtccacctc 16216  T
Q  168 taatcaaattatgcgacacag 188  Q
    |||||||||||||||||||||    
T  16215 taatcaaattatgcgacacag 16195  T

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Target: scaffold0124 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 42752 - 42871
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||  |||||||||||||| ||||||||||||    
T  42752 atttcaagtaatgcatttaatcattaaatcacattagaatcagcttaacagttcataacagcttcacagatctcagttaacatcttaaataggtcacatt 42851  T
Q  148 actacccaggggtccatctc 167  Q
    |||||| | |||||||||||    
T  42852 actacctaagggtccatctc 42871  T

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Target: scaffold0220 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 4966 - 4780
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaac-ttaacattt 100  Q
    ||||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||| ||| | ||| ||| |  | |||| ||| ||||| |||||||||    
T  4966 gatatcaaataaaagcaagcatcatctcaatcattcattcattaacatttcaagtattgccaataaacatcatcttacatcatattcaacattaacattt 4867  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 187  Q
    |||||||||||| ||||||||||| ||| |||||||||||||| | | ||||||| | ||||| |||| ||||||||||||||||||    
T  4866 cataacagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtccacctctgatcaaattatgcgacaca 4780  T

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Target: scaffold0131 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 36592 - 36731
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||||||| ||||| ||||||| ||| |||||  |||||| ||||||||||||| ||||||||||||||| ||||| ||||||| |||||    
T  36592 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataacagcttcacagattgcagttaacttcttaaataggtctcatta 36691  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| |||||| ||||||| ||||| |||||||||||    
T  36692 ctacccaagggtccttctctaaacaaatcatgcgacacag 36731  T

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Target: scaffold0031 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 185
Target Start/End: Complemental strand, 65821 - 65642
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcattaaatcacattataatcaact-taacattt 100  Q
    ||||||||| |||| ||||||||| ||||||||||| ||| | |    ||||| |||||||||||| ||||| ||||||| ||| |||||  |||||| |    
T  65821 gatatcaaataaaa-caagcatcatctcaatcattcattcataa----ttcaattaatgcaattaaacattatatcacatcatattcaacactaacatct 65727  T
Q  101 cataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgaca 185  Q
    ||||||||  || ||| ||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  65726 cataacaggatcacaggttgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgaca 65642  T

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Target: scaffold0031; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 53687 - 53789
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  53687 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 53785  T
Q  150 tacc 153  Q
    ||||    
T  53786 tacc 53789  T

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Target: scaffold0031; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 36409 - 36348
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  36409 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 36348  T

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Target: scaffold0023 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 38439 - 38325
Alignment:
Q  75 atcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatca 173  Q
    ||||||| ||| ||||| ||||||||||||||||||||| |||||||||  |||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  38439 atcacatcatattcaacattaacatttcataacagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaatca 38340  T
Q  174 aattatgcgacacag 188  Q
    |||||||||||||||    
T  38339 aattatgcgacacag 38325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 23626 - 23516
Alignment:
Q  75 atcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatca 173  Q
    ||||||| ||| ||||| ||||||||||||||||||||| |||||||||  |||| |||| ||||||||||||||||||||| ||||||| |  ||||||    
T  23626 atcacatcatattcaacattaacatttcataacagcttcacagattgcaactaacttctt-tataggtcacattactacccaagggtccaacattaatca 23528  T
Q  174 aattatgcgaca 185  Q
    ||||||||||||    
T  23527 aattatgcgaca 23516  T

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Target: scaffold1895 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 1193 - 1073
Alignment:
Q  69 cattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctc 167  Q
    ||||| ||||||| ||| ||||| |||| |||||||||||||||| | ||||||||||||| |||||||||||||| ||||||||||| || ||||||||    
T  1193 cattatatcacatcatattcaacattaatatttcataacagcttcactgattgcagttaacttcttatataggtcatattactacccaaggatccatctc 1094  T
Q  168 taatcaaattatgcgacacag 188  Q
    |||||||||||||||||||||    
T  1093 taatcaaattatgcgacacag 1073  T

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Target: scaffold1296 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 523 - 663
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||  |||||| |||||  || ||||||||||| ||||||| ||||    
T  523 atttcaagtaatgcatttaatcattaaatcacattataatcagcttaacagttcatagtagcttcacagatctcaattaacatcttaaataggtcgcatt 622  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||||| | |||||| |||||||| ||||    
T  623 actacctaagggtccatcccaaatcaacttatgcgaaacag 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 715 - 855
Alignment:
Q  50 ttcaagtaatgcaatt-aatcattaaatcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||||||| ||||||| |||||||||||| ||| ||| ||||| |||||||  | |||||||||| ||||||||||||||| ||||| ||||||| ||||    
T  715 ttcaagtagtgcaatttaatcattaaatcgcatcatattcaacattaacatcacgtaacagcttcacagattgcagttaacttcttaaataggtctcatt 814  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  815 actaccgaagggtccatctctaatcaaattatgcgacacag 855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 1476 - 1373
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||||||| || |||| |||||||||||||| ||||||| |||||||||||||| |||||  |||||||||||||| ||||||||||||    
T  1476 atttcaagtaatgcaattattcgttaagtcacattataatcagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacatt 1377  T
Q  148 acta 151  Q
    ||||    
T  1376 acta 1373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 174901 - 175040
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||| ||| ||||| ||||| | ||| |||||  |||||| |||||| |||||| |||||| |||||||| ||||||||||||| |||||    
T  174901 ttcaagtaatgcaactaaacattatatcacgtcatattcaacactaacatctcataatagcttcacagatttcagttaacttcttatataggtctcatta 175000  T
Q  149 ctacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||| | |||||||||||||||||||| |||||||||||    
T  175001 ctaccaaagggtccatctctaatcaaatcatgcgacacag 175040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 4560 - 4665
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || ||| ||| || |||||||| ||||||||||||| || |    
T  4560 atttcaagtaatgcaattaatcaataaatcacattataatcaacttagcatttcataatagtttcacagtttacagttaacttcttatataggtctcact 4659  T
Q  148 actacc 153  Q
    ||||||    
T  4660 actacc 4665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 2071 - 1930
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacattt-cataacagcttcgcagattgcagttaacatcttatataggtcacat 146  Q
    ||||||||||||||| ||||||||||||| |||||| || ||||||| ||||| |||||||||||| || ||| ||||||| |||||| |||||||||||    
T  2071 atttcaagtaatgcatttaatcattaaattacattacaaacaacttagcattttcataacagcttcacatatttcagttaatatcttaaataggtcacat 1972  T
Q  147 tactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||| | ||||||| | |||||| | | |||||||||||    
T  1971 tactacctaagggtccaaccctaatcgattcatgcgacacag 1930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 1960 - 2099
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||| ||| |||||| | |||||||||||| ||||||||||||    
T  1960 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagtttcacagatttcggttaacatcttaaataggtcacatt 2058  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||| || | ||||||| |||||||||| || ||||| ||||    
T  2059 actccctaagggtccaactctaatcaatttgtgcgaaacag 2099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 9642 - 9781
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| ||||| ||| |||||| | |||||||||||| ||||||||||||    
T  9642 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagtttcacagatttcggttaacatcttaaataggtcacatt 9740  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||| || | ||||||| |||||||||| || ||||| ||||    
T  9741 actccctaagggtccaactctaatcaatttgtgcgaaacag 9781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 6401 - 6267
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||| ||||||||| |||||||||||||||||||| || ||| ||| || |||| ||||||||| || ||| |||||||||||||| ||||||||||||    
T  6401 atttcgagtaatgcatttaatcattaaatcacattacaaacaagttagcagttca-aacagcttcacatatttcagttaacatcttaaataggtcacatt 6303  T
Q  148 actacccaggggtccatctctaatcaaattatgcga 183  Q
    |||||| | ||||||| | |||||||| ||||||||    
T  6302 actacctaagggtccaaccctaatcaacttatgcga 6267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 44211 - 44345
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    |||| |||||||||| |||||||||||||||||||| || ||||||| || || | || |||||| |||||| |||||||||||||| ||||||||||||    
T  44211 attttaagtaatgcatttaatcattaaatcacattacaaacaacttagcagtttaaaa-agcttcacagatttcagttaacatcttaaataggtcacatt 44309  T
Q  148 actacccaggggtccatctctaatcaaattatgcga 183  Q
    |||||| | ||||||| | |||||||| ||||||||    
T  44310 actacctaagggtccaaccctaatcaacttatgcga 44345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 5719 - 5820
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||  ||||  |||||||||||||| |||||||||||||||    
T  5719 tcaagtaatgcaattattcatttaatcacattataatcagcttaacaattcataacagcttcaaagatctcagttaacatctta-ataggtcacattact 5817  T
Q  151 acc 153  Q
    |||    
T  5818 acc 5820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 6914 - 7015
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||  ||||  |||||||||||||| |||||||||||||||    
T  6914 tcaagtaatgcaattattcatttaatcacattataatcagcttaacaattcataacagcttcaaagatctcagttaacatctta-ataggtcacattact 7012  T
Q  151 acc 153  Q
    |||    
T  7013 acc 7015  T

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Target: scaffold0280 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 19275 - 19173
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||| | |||||||||||||| |||||| || ||||||||||||||||||| || ||||    
T  19275 tcaagtaatgcaattaatcaataaatcacatcataatcagcttaatagttcataacagcttcacagatttcatttaacatcttatataggtctcactact 19176  T
Q  151 acc 153  Q
    |||    
T  19175 acc 19173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 48431 - 48306
Alignment:
Q  64 ttaatcattaaatcacattataatcaactt-aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtcc 162  Q
    ||||| |||||||||| | ||| ||||||| |||||  || ||||||||| || |||||| ||||| ||||||||||||| |||||||||||| ||||||    
T  48431 ttaattattaaatcacgtcatattcaactttaacatcacacaacagcttcacatattgcatttaacttcttatataggtctcattactacccaagggtcc 48332  T
Q  163 atctctaatcaaattatgcgacacag 188  Q
    |||||||||||||||||| |||||||    
T  48331 atctctaatcaaattatgtgacacag 48306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 1027 - 1166
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||| ||  ||| |||||| || |||||| |||||||||||||| ||||||||||||    
T  1027 atttcaagtaatgcatttaatcgttaaatcacattacaaacaacttagcaggtca-aacagcctcacagatttcagttaacatcttaaataggtcacatt 1125  T
Q  148 actacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    |||||  | ||||||| | |||||||| || ||||||||||    
T  1126 actacttaagggtccaaccctaatcaatttgtgcgacacag 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 192300 - 192197
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||| |||||||||||||||||||| || || ||||| | ||||||||| |||| |||||  |||||||||||||| |||||||||||||||    
T  192300 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaaaaattcataacaacttcacagatctcagttaacatcttaaataggtcacattact 192201  T
Q  151 accc 154  Q
    ||||    
T  192200 accc 192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 4208 - 4106
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||| |||||||||||||||||||| || || ||||||| |||||||||| ||| || ||  |||||||||||||| |||||||||||||||    
T  4208 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaacaattcataacagattcacatatctcagttaacatcttaaataggtcacattact 4109  T
Q  151 acc 153  Q
    |||    
T  4108 acc 4106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 165
Target Start/End: Original strand, 23979 - 24094
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaact-taacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    ||||||||||| |||||| ||||| ||||||| ||| |||||  |||||| || |||||||||| ||||||||||||||| ||||||||||||| |||||    
T  23979 ttcaagtaatgaaattaa-cattatatcacatcatattcaacactaacatctcttaacagcttcacagattgcagttaacttcttatataggtctcatta 24077  T
Q  149 ctacccaggggtccatc 165  Q
    ||||||| |||||||||    
T  24078 ctacccaagggtccatc 24094  T

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Target: scaffold0439 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 2419 - 2317
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||| | |||||||||||||||||||| || || ||||||| |||||||||||||| |||||| |||||||||||| | ||||||  |||||||    
T  2419 tcaagtaatgtatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagattccagttaacatctaagataggtttcattact 2320  T
Q  151 acc 153  Q
    |||    
T  2319 acc 2317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 10279 - 10177
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||| | |||||||||||||||||||| || || ||||||| |||||||||||||| |||||| |||||||||||| | ||||||  |||||||    
T  10279 tcaagtaatgtatttaatcattaaatcacattacaaacagcttaacaattcataacagcttcacagattccagttaacatctaagataggtttcattact 10180  T
Q  151 acc 153  Q
    |||    
T  10179 acc 10177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 27002 - 27096
Alignment:
Q  94 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacacag 188  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||| |||| ||| ||| ||||    
T  27002 aacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatctctaaacaaaatattcgaaacag 27096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 35494 - 35393
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||| |||||||||||||||||||| || || ||||| | |||||||||||||| ||| |  |||||||||||| | |||||||||||||||    
T  35494 tcaagtaatgcatttaatcattaaatcacattacaaacagcttaataattcataacagcttcacaggtctcagttaacatctcaaataggtcacattact 35395  T
Q  151 ac 152  Q
    ||    
T  35394 ac 35393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 21746 - 21670
Alignment:
Q  94 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaa 170  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||    
T  21746 aacatctcataacagcttcacagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaa 21670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 29638 - 29562
Alignment:
Q  94 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaa 170  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||    
T  29638 aacatctcataacagcttcacagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaa 29562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 15190 - 15090
Alignment:
Q  54 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    ||||||||| |||||||||||||||||||| || |  |||| || |||||||||||||| |||||  ||||||||||||||  |||||||||||||||||    
T  15190 agtaatgcatttaatcattaaatcacattacaaactgcttagcaattcataacagcttcacagatctcagttaacatcttaagtaggtcacattactacc 15091  T
Q  154 c 154  Q
    |    
T  15090 c 15090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 19712 - 19612
Alignment:
Q  54 agtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    ||||||||| |||||||||||||||||||| || |  |||| || |||||||||||||| |||||  ||||||||||||||  |||||||||||||||||    
T  19712 agtaatgcatttaatcattaaatcacattacaaactgcttagcaattcataacagcttcacagatctcagttaacatcttaagtaggtcacattactacc 19613  T
Q  154 c 154  Q
    |    
T  19612 c 19612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 414035 - 413947
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatata 138  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| |||||| ||||||||||||||||||    
T  414035 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacagattccagttaacatcttatata 413947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 71454 - 71537
Alignment:
Q  69 cattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    ||||| ||||||||||||||| |||||||||||| || |||||| ||| |  |||||||||||||| ||||||| ||||| ||||    
T  71454 cattatatcacattataatca-cttaacatttcacaatagcttcacagttctcagttaacatcttaaataggtctcattagtacc 71537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 71188 - 71241
Alignment:
Q  56 taatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||||| |||||||| ||||||||||| || |||||||||| |||||||||||    
T  71188 taatgcatttaatcataaaatcacattacaaacaacttaacagttcataacagc 71241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 7603 - 7706
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| ||| || ||||||| ||||| || |||||||||| ||| ||||| |||| |||||| |||||||||||||||||||||  ||||||    
T  7603 ttcaagtaatgcatttattcgttaaatcgcattacaaacaacttaacagttcttaacaacttcacagattccagttaacatcttatataggtttcattac 7702  T
Q  150 tacc 153  Q
    ||||    
T  7703 tacc 7706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 1922 - 2026
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatt 147  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||| |||||| || || ||| || ||||||||||||||||||| || |    
T  1922 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttca-aacagcctcacatatttcatttaacatcttatataggtctcact 2020  T
Q  148 actacc 153  Q
    ||||||    
T  2021 actacc 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 2055 - 2135
Alignment:
Q  94 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 174  Q
    ||||| ||||| ||||||| ||||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||    
T  2055 aacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 2135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 8693 - 8796
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| |||||| ||||||||||||| || |||||||||| ||| ||||| |||| ||| |  |||||||||||||| ||||||  ||||||    
T  8693 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaacagttcttaacaacttcacaggtctcagttaacatcttaaataggtttcattac 8792  T
Q  150 tacc 153  Q
    ||||    
T  8793 tacc 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 66399 - 66297
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||||| ||| |  ||||||| |||||| ||||||| |||||     
T  66399 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctcattag 66301  T
Q  150 tacc 153  Q
    ||||    
T  66300 tacc 66297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 17097 - 17051
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaactta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17097 atttcaagtaatgcaattaatcattaaatcacattataatcaactta 17051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 7840 - 7771
Alignment:
Q  2 gatatcaaacaaaagcaagcatcaactcaatcattcgttccttaccatttcaagtaatgcaattaatcat 71  Q
    ||||||||| |||||||||||||| |||||||| || ||| ||| |||||||||||||||||||||||||    
T  7840 gatatcaaataaaagcaagcatcatctcaatcagtcattcattaacatttcaagtaatgcaattaatcat 7771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 445 - 514
Alignment:
Q  84 taatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    |||||| ||||||| |||||||||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  445 taatcagcttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattactacc 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 4764 - 4690
Alignment:
Q  75 atcacattataatcaac-ttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||| ||| ||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  4764 atcacatcatattcaacattaacatttcata-cagcttcacagattgcagttaacttcttatataggtcacattac 4690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 13026 - 13128
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||| | ||| |  ||||||| |||||| ||||||| |||||     
T  13026 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagctccacagttctcagttaatatcttaaataggtctcattag 13124  T
Q  150 tacc 153  Q
    ||||    
T  13125 tacc 13128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 19313 - 19369
Alignment:
Q  53 aagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagct 110  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||    
T  19313 aagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagct 19369  T

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Target: scaffold0001 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 422516 - 422413
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||| ||| || ||||||||||||| || |||||||| | ||| ||||| |||| ||||||  ||||||||||||| ||||||  ||||||    
T  422516 ttcaagtaatgcatttagtcgttaaatcacattacaaacaacttaatagttcttaacaacttcacagattctagttaacatcttaaataggtttcattac 422417  T
Q  150 tacc 153  Q
    ||||    
T  422416 tacc 422413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Original strand, 173412 - 173473
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 112  Q
    ||||||||||||||| ||||| || |||||| ||||||| ||||| |||||||||| ||||||    
T  173412 ttcaagtaatgcaatcaatcaatatatcacaatataatc-acttagcatttcataatagcttc 173473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 30730 - 30637
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtc 142  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||  | |||| |||| |||  |||||| |||||||||||||| |||||||    
T  30730 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagaagttca-aacaactttacagatttcagttaacatcttaaataggtc 30637  T

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Target: scaffold0141 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 14410 - 14349
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  14410 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 14349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 207825 - 207764
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  207825 atttcaagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 207764  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 189700 - 189639
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||    
T  189700 atttcgagtaatgcatttaatcattaaatcacattataaacaacttagcagttcataacagc 189639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 13468 - 13369
Alignment:
Q  53 aagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactac 152  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| |||| | ||| |  ||||||| |||||| ||||||| ||||| |||    
T  13468 aagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataatagctacacagttatcagttaatatcttaaataggtctcattagtac 13370  T

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Target: scaffold0114 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 7469 - 7549
Alignment:
Q  94 aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaa 174  Q
    ||||| ||||| ||| |||  |||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||    
T  7469 aacatctcatatcagtttcatagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 7549  T

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Target: scaffold0349 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 12544 - 12646
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||||| ||||||| |||||     
T  12544 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatcttagataggtctcattag 12642  T
Q  150 tacc 153  Q
    ||||    
T  12643 tacc 12646  T

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Target: scaffold0029 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 80834 - 80936
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||| | ||||||||||||||| | ||||| |||||||  |||||||| || ||  |||||||||||||| ||||||| |||||     
T  80834 ttcaagtaatgcaatcaattaataaatcacattataaac-acttagcatttcaatacagcttcacaaataacagttaacatcttagataggtctcattag 80932  T
Q  150 tacc 153  Q
    ||||    
T  80933 tacc 80936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 12894 - 13017
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaactt-aacatttcataacagcttcgcagattgcagttaacatcttatataggtcacatta 148  Q
    |||||||||||||  ||| ||||| |  |||| ||||||||||  ||||| |||||  |||||| || |||||||||||| ||||||||||||| |||||    
T  12894 ttcaagtaatgca--taaacattataatacatcataatcaactccaacatctcatattagcttcacaaattgcagttaacttcttatataggtctcatta 12991  T
Q  149 ctacccaggggtccatctctaatcaa 174  Q
    ||||| | |||||||||  |||||||    
T  12992 ctacctaagggtccatccataatcaa 13017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 80498 - 80559
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||||  | |||||||||||    
T  80498 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagtagttcataacagc 80559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 61596 - 61560
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  61596 ttcaagtaatgcaatcaatcaataaatcacattataa 61560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 65512 - 65476
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  65512 ttcaagtaatgcaatcaatcaataaatcacattataa 65476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 18616 - 18555
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttc 112  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  18616 ttcaagtaatgcaatcaatcaataaatcacattataatc-acttagcatttcataaaagcttc 18555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 6798 - 6859
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  6798 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 6859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 32983 - 32922
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  32983 atttcgagtaatgcatttaatcattaaatcacattaaaaacaacttagcagttcataacagc 32922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 31002 - 31063
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  31002 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 31063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 9642 - 9547
Alignment:
Q  57 aatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    ||||| || ||||| ||||||||||||||||| |||||| ||||||||| |||||| ||| |  ||||||| |||||| ||||||| ||||| ||||    
T  9642 aatgcgatcaatcaataaatcacattataatc-acttaaaatttcataaaagcttcacagttctcagttaatatcttaaataggtctcattagtacc 9547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 3859 - 3757
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattac 149  Q
    ||||||||||||||| ||||| ||||||||||||||| | ||||| |||||||  | |||||| || ||  |||||||||||| | ||||||| |||||     
T  3859 ttcaagtaatgcaatcaatcaataaatcacattataaac-acttagcatttcaatatagcttcacaaataacagttaacatctcagataggtctcattag 3761  T
Q  150 tacc 153  Q
    ||||    
T  3760 tacc 3757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 485 - 555
Alignment:
Q  83 ataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    ||||||| ||||| | ||||||||| |||| |||||| || ||||||||||||||||||| || |||||||    
T  485 ataatcagcttaatagttcataacaacttcacagatttcatttaacatcttatataggtctcactactacc 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 7253 - 7152
Alignment:
Q  51 tcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattact 150  Q
    |||||||||||| |||||| ||||||||||||| || ||  ||||| |||||||||||| || |||||  |||||||||||| | |||| ||| | ||||    
T  7253 tcaagtaatgcatttaatctttaaatcacattacaa-cagtttaacttttcataacagcctcacagatctcagttaacatctcacatagatcataatact 7155  T
Q  151 acc 153  Q
    |||    
T  7154 acc 7152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 20445 - 20391
Alignment:
Q  55 gtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    |||||||| |||||||||||||||||||| || ||||||| || |||||||||||    
T  20445 gtaatgcatttaatcattaaatcacattacaaacaacttagcagttcataacagc 20391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 45272 - 45342
Alignment:
Q  83 ataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    ||||||| ||||| | ||||||||| |||| |||||| || ||||||||||||||||||| || |||||||    
T  45272 ataatcagcttaatagttcataacaacttcacagatttcatttaacatcttatataggtctcactactacc 45342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 36263 - 36202
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||||||||| || ||||||| || |||| ||||||    
T  36263 atttcgagtaatgcatttaatcattaaatcacattacaaacaacttagcagttcacaacagc 36202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 35927 - 35891
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  35927 ttcaagtaatgcaatcaatcaataaatcacattataa 35891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 11824 - 11763
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataatcaacttaacatttcataacagc 109  Q
    ||||| ||||||||| |||||||||||||| ||||| || ||||||| || |||||||||||    
T  11824 atttcgagtaatgcatttaatcattaaatcgcattaaaaacaacttagcagttcataacagc 11763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 2932 - 2976
Alignment:
Q  202 tcaggctatgtttgagagacctgattaccatatgaagagtcatct 246  Q
    ||||| || |||||| |||||||||||||||||||||||||||||    
T  2932 tcaggttaagtttgatagacctgattaccatatgaagagtcatct 2976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 19994 - 19899
Alignment:
Q  57 aatgcaattaatcattaaatcacattataatcaacttaacatttcataacagcttcgcagattgcagttaacatcttatataggtcacattactacc 153  Q
    |||||||| ||||| ||||||||||||||||| ||||||| |||||||| |||||| ||| |  || |||| |||||  ||||||| ||||| ||||    
T  19994 aatgcaatcaatcaataaatcacattataatc-acttaacgtttcataaaagcttcacagttctcaattaatatctttaataggtctcattagtacc 19899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1052 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 3035 - 3074
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  3035 atttcaagtaatgcatttaatcattaattcacattataat 3074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 11511 - 11558
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataatcaacttaaca 97  Q
    ||||||||||||| |||||| ||||||||||||| || ||||||||||    
T  11511 ttcaagtaatgcatttaatcgttaaatcacattacaaacaacttaaca 11558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 188
Target Start/End: Original strand, 15643 - 15674
Alignment:
Q  157 gggtccatctctaatcaaattatgcgacacag 188  Q
    ||||||||||||||||||||||||||||||||    
T  15643 gggtccatctctaatcaaattatgcgacacag 15674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 10029 - 9990
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatcacattataat 87  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  10029 atttcaagtaatgcatttaatcattaattcacattataat 9990  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 77
Target Start/End: Complemental strand, 73754 - 73725
Alignment:
Q  48 atttcaagtaatgcaattaatcattaaatc 77  Q
    ||||||||||||||||||||||||||||||    
T  73754 atttcaagtaatgcaattaatcattaaatc 73725  T

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Target: scaffold0372 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 5085 - 5049
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  5085 ttcaagtaatgcaatcaatcaataaatcacattataa 5049  T

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Target: scaffold0268 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 992 - 956
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  992 ttcaagtaatgcaatcaatcaataaatcacattataa 956  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 58703 - 58667
Alignment:
Q  50 ttcaagtaatgcaattaatcattaaatcacattataa 86  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  58703 ttcaagtaatgcaatcaatcaataaatcacattataa 58667  T

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