View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9898_low_8 (Length: 257)
Name: NF9898_low_8
Description: NF9898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9898_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 47124333 - 47124096
Alignment:
| Q |
1 |
ccaccctcttcaccccacctttctctagtgccaaacccaatgaacatgtctcagtaccatggaaacaatcacccacattgtccttcaccaatccaaacct |
100 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47124333 |
ccaccctcttcaccccacctttctttagtgccaaacccaatgaacatgtctcagtaccatggaaacaatcacccacattgtccttcaccaatccaaacct |
47124234 |
T |
|
| Q |
101 |
tttcaagcttacaatttcaagtaacatcaaaacagcagctgttactgaggaagcaacagaagcaccagttggcttcaccccacctgagttagacccaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47124233 |
tttcaagcttacaatttcaagtaacatcaaaacagcagctgttactgaggaagcaacagaagcaccagttggcttcaccccacctgagttagacccaaac |
47124134 |
T |
|
| Q |
201 |
actccctccccaattttcagtggtaacactggactgga |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
47124133 |
actccctccccaattttcagtggtaacactggactgga |
47124096 |
T |
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