View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9900_low_7 (Length: 318)

Name: NF9900_low_7
Description: NF9900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9900_low_7
NF9900_low_7
[»] chr6 (32 HSPs)
chr6 (15-318)||(33330020-33330322)
chr6 (15-318)||(33335517-33335819)
chr6 (15-318)||(16838952-16839243)
chr6 (15-318)||(6005625-6005919)
chr6 (15-306)||(5343697-5343977)
chr6 (15-318)||(28155158-28155450)
chr6 (15-318)||(6438705-6438996)
chr6 (21-215)||(14737159-14737353)
chr6 (21-215)||(14742019-14742213)
chr6 (21-211)||(22010282-22010472)
chr6 (21-210)||(11857286-11857474)
chr6 (21-113)||(5266487-5266579)
chr6 (36-214)||(5674338-5674515)
chr6 (21-95)||(30125111-30125185)
chr6 (35-112)||(6136363-6136440)
chr6 (36-112)||(33342503-33342580)
chr6 (36-112)||(6026942-6027018)
chr6 (36-112)||(22709460-22709536)
chr6 (33-112)||(16578917-16578996)
chr6 (33-112)||(16616384-16616463)
chr6 (36-112)||(13150957-13151034)
chr6 (36-112)||(34164552-34164629)
chr6 (36-112)||(34166774-34166851)
chr6 (36-112)||(25420905-25420981)
chr6 (33-112)||(16554559-16554638)
chr6 (33-112)||(16631115-16631194)
chr6 (36-90)||(2171941-2171995)
chr6 (36-205)||(3073065-3073234)
chr6 (33-112)||(27647573-27647652)
chr6 (36-113)||(411794-411872)
chr6 (36-90)||(5757060-5757114)
chr6 (36-90)||(23896794-23896848)
[»] chr3 (36 HSPs)
chr3 (15-318)||(2672506-2672808)
chr3 (15-318)||(2676662-2676964)
chr3 (19-318)||(18656639-18656937)
chr3 (10-318)||(24968315-24968622)
chr3 (10-318)||(8512425-8512745)
chr3 (10-318)||(8517305-8517625)
chr3 (10-306)||(32475704-32475989)
chr3 (10-306)||(32480562-32480847)
chr3 (21-211)||(28503412-28503602)
chr3 (21-167)||(22172755-22172900)
chr3 (36-211)||(28501260-28501435)
chr3 (21-205)||(40372349-40372532)
chr3 (21-205)||(7167606-7167789)
chr3 (21-211)||(8738616-8738805)
chr3 (21-211)||(9090854-9091043)
chr3 (36-173)||(27352189-27352325)
chr3 (21-213)||(8477717-8477909)
chr3 (21-113)||(2671158-2671250)
chr3 (33-112)||(54634815-54634894)
chr3 (36-112)||(4598922-4598999)
chr3 (36-112)||(4601143-4601220)
chr3 (36-112)||(10208886-10208963)
chr3 (36-112)||(25637121-25637197)
chr3 (33-112)||(6716190-6716269)
chr3 (33-112)||(6718374-6718453)
chr3 (36-90)||(1306441-1306495)
chr3 (36-112)||(10055913-10055990)
chr3 (36-112)||(10058135-10058212)
chr3 (36-112)||(10060357-10060434)
chr3 (36-112)||(10062579-10062656)
chr3 (36-112)||(10064801-10064878)
chr3 (36-112)||(10067023-10067100)
chr3 (36-112)||(10211086-10211163)
chr3 (33-112)||(45282671-45282750)
chr3 (132-205)||(7782455-7782525)
chr3 (36-112)||(800794-800870)
[»] chr1 (18 HSPs)
chr1 (5-318)||(43988026-43988339)
chr1 (15-318)||(25439486-25439776)
chr1 (15-318)||(25444679-25444969)
chr1 (15-318)||(39445704-39445995)
chr1 (15-318)||(44023464-44023754)
chr1 (15-318)||(1054601-1054892)
chr1 (21-211)||(41390903-41391093)
chr1 (21-211)||(41398558-41398748)
chr1 (21-211)||(24786918-24787107)
chr1 (21-203)||(24793740-24793921)
chr1 (36-112)||(44203326-44203402)
chr1 (36-205)||(9986894-9987063)
chr1 (36-113)||(20622635-20622712)
chr1 (36-90)||(19361021-19361075)
chr1 (36-90)||(19365877-19365931)
chr1 (36-113)||(51765099-51765176)
chr1 (57-217)||(24202360-24202521)
chr1 (36-113)||(21053648-21053726)
[»] chr5 (39 HSPs)
chr5 (15-318)||(33791524-33791816)
chr5 (15-318)||(2785583-2785875)
chr5 (15-318)||(33768392-33768684)
chr5 (4-318)||(31396566-31396868)
chr5 (4-318)||(31401423-31401725)
chr5 (15-318)||(28807163-28807454)
chr5 (36-318)||(37561055-37561325)
chr5 (36-318)||(37556233-37556503)
chr5 (21-211)||(15044997-15045187)
chr5 (36-210)||(1456746-1456920)
chr5 (21-209)||(31180568-31180756)
chr5 (21-210)||(27445285-27445473)
chr5 (21-210)||(27450128-27450316)
chr5 (21-203)||(43599043-43599224)
chr5 (21-203)||(43604535-43604716)
chr5 (21-203)||(43610027-43610208)
chr5 (21-210)||(43592591-43592779)
chr5 (21-114)||(30631762-30631855)
chr5 (36-214)||(24136198-24136375)
chr5 (21-106)||(29402643-29402728)
chr5 (36-112)||(25077814-25077890)
chr5 (36-112)||(25135783-25135859)
chr5 (33-112)||(10592948-10593027)
chr5 (33-112)||(22536668-22536747)
chr5 (36-112)||(26177575-26177651)
chr5 (36-112)||(38219845-38219921)
chr5 (57-211)||(29751461-29751615)
chr5 (36-112)||(9789624-9789700)
chr5 (36-112)||(18442048-18442124)
chr5 (33-112)||(16544099-16544178)
chr5 (33-112)||(16546321-16546400)
chr5 (33-112)||(40379783-40379862)
chr5 (33-112)||(40381994-40382073)
chr5 (36-90)||(9352916-9352970)
chr5 (36-113)||(29720074-29720152)
chr5 (128-205)||(10593044-10593119)
chr5 (36-112)||(16407750-16407826)
chr5 (36-112)||(16409186-16409262)
chr5 (36-112)||(26170466-26170542)
[»] chr8 (25 HSPs)
chr8 (15-318)||(35745599-35745891)
chr8 (21-318)||(10683832-10684141)
chr8 (15-318)||(39784412-39784703)
chr8 (21-211)||(25327757-25327947)
chr8 (21-211)||(6311652-6311842)
chr8 (21-211)||(7289521-7289711)
chr8 (21-211)||(10688692-10688882)
chr8 (21-211)||(18852720-18852909)
chr8 (21-211)||(18870114-18870303)
chr8 (21-203)||(30656008-30656189)
chr8 (21-204)||(4759627-4759809)
chr8 (21-203)||(36979741-36979921)
chr8 (36-211)||(1261523-1261699)
chr8 (21-113)||(33037380-33037472)
chr8 (33-112)||(3439193-3439271)
chr8 (33-112)||(25689646-25689725)
chr8 (36-112)||(42575724-42575801)
chr8 (36-111)||(15290251-15290327)
chr8 (36-111)||(15470620-15470696)
chr8 (237-307)||(25327952-25328021)
chr8 (237-307)||(25328078-25328147)
chr8 (36-112)||(2627427-2627503)
chr8 (36-112)||(26288332-26288408)
chr8 (36-112)||(26301589-26301665)
chr8 (36-112)||(26313583-26313659)
[»] chr2 (15 HSPs)
chr2 (15-318)||(19344630-19344922)
chr2 (15-318)||(19349488-19349780)
chr2 (57-318)||(32246993-32247244)
chr2 (19-211)||(39811568-39811760)
chr2 (21-214)||(9295955-9296147)
chr2 (21-205)||(14291849-14292032)
chr2 (21-205)||(11098480-11098663)
chr2 (36-112)||(12647783-12647859)
chr2 (36-90)||(3492214-3492268)
chr2 (36-112)||(25410081-25410157)
chr2 (36-90)||(30833030-30833084)
chr2 (36-112)||(4484738-4484814)
chr2 (15-50)||(32247230-32247265)
chr2 (36-90)||(28258759-28258813)
chr2 (36-112)||(32289257-32289333)
[»] scaffold0197 (2 HSPs)
scaffold0197 (4-318)||(18740-19042)
scaffold0197 (10-318)||(13866-14186)
[»] scaffold0259 (1 HSPs)
scaffold0259 (10-318)||(1821-2128)
[»] scaffold0028 (1 HSPs)
scaffold0028 (10-318)||(148526-148833)
[»] chr7 (30 HSPs)
chr7 (10-318)||(24265759-24266079)
chr7 (10-306)||(16880293-16880578)
chr7 (10-306)||(16885149-16885433)
chr7 (10-306)||(24260903-24261188)
chr7 (33-318)||(21811844-21812117)
chr7 (21-211)||(24023912-24024100)
chr7 (20-211)||(31109163-31109354)
chr7 (21-211)||(4873438-4873628)
chr7 (36-187)||(12406598-12406749)
chr7 (48-210)||(12397223-12397385)
chr7 (21-205)||(2058329-2058512)
chr7 (21-113)||(21640238-21640330)
chr7 (21-114)||(20357121-20357214)
chr7 (36-211)||(24789535-24789709)
chr7 (36-202)||(1533012-1533177)
chr7 (241-318)||(19992519-19992595)
chr7 (36-112)||(6592737-6592813)
chr7 (36-112)||(6594953-6595029)
chr7 (36-112)||(18414090-18414166)
chr7 (24-112)||(20343596-20343684)
chr7 (36-205)||(21646365-21646534)
chr7 (36-112)||(32060704-32060780)
chr7 (36-112)||(1562403-1562479)
chr7 (36-112)||(18409214-18409290)
chr7 (36-112)||(43504536-43504612)
chr7 (36-112)||(48408507-48408583)
chr7 (36-112)||(25767361-25767437)
chr7 (36-112)||(39731042-39731118)
chr7 (33-112)||(18389160-18389239)
chr7 (33-112)||(18392596-18392675)
[»] scaffold0009 (1 HSPs)
scaffold0009 (10-318)||(176532-176854)
[»] chr4 (22 HSPs)
chr4 (15-318)||(45347404-45347696)
chr4 (15-318)||(45356885-45357176)
chr4 (19-318)||(5732869-5733155)
chr4 (15-318)||(18855931-18856222)
chr4 (19-318)||(3814228-3814514)
chr4 (22-211)||(9228780-9228969)
chr4 (21-211)||(18712348-18712538)
chr4 (21-211)||(9223992-9224182)
chr4 (34-211)||(56141618-56141795)
chr4 (21-205)||(24742301-24742484)
chr4 (21-210)||(51520769-51520957)
chr4 (21-113)||(29761073-29761165)
chr4 (36-112)||(7122375-7122451)
chr4 (36-112)||(7124597-7124673)
chr4 (36-112)||(8393090-8393166)
chr4 (36-112)||(28468086-28468162)
chr4 (36-214)||(13992592-13992770)
chr4 (36-112)||(8395299-8395375)
chr4 (36-112)||(5135757-5135834)
chr4 (36-112)||(5137983-5138060)
chr4 (36-112)||(31495717-31495793)
chr4 (151-205)||(29761001-29761055)
[»] scaffold0464 (1 HSPs)
scaffold0464 (15-318)||(567-858)
[»] scaffold0355 (1 HSPs)
scaffold0355 (36-210)||(3445-3619)
[»] scaffold0135 (1 HSPs)
scaffold0135 (36-211)||(34662-34837)
[»] scaffold0665 (1 HSPs)
scaffold0665 (21-129)||(8091-8199)
[»] scaffold0674 (1 HSPs)
scaffold0674 (36-112)||(4126-4202)
[»] scaffold0286 (1 HSPs)
scaffold0286 (21-112)||(22033-22124)
[»] scaffold0565 (1 HSPs)
scaffold0565 (36-112)||(3001-3077)
[»] scaffold0188 (1 HSPs)
scaffold0188 (36-112)||(17540-17616)
[»] scaffold0491 (2 HSPs)
scaffold0491 (36-112)||(11569-11644)
scaffold0491 (52-112)||(9124-9184)
[»] scaffold0510 (1 HSPs)
scaffold0510 (36-90)||(1192-1246)


Alignment Details
Target: chr6 (Bit Score: 264; Significance: 1e-147; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 33330020 - 33330322
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33330020 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 33330119  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  33330120 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaag 33330219  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
    | ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  33330220 acaaccttaagacaaccttgagagaacttaagaga-gaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttag 33330318  T
Q  315 gttg 318  Q
    ||||    
T  33330319 gttg 33330322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 33335517 - 33335819
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33335517 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 33335616  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||    
T  33335617 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcatgtgcttttttgaag 33335716  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
    | ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  33335717 acaaccttaagacaaccttgagagaacttaagaga-gaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttag 33335815  T
Q  315 gttg 318  Q
    ||||    
T  33335816 gttg 33335819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 16839243 - 16838952
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16839243 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 16839144  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  16839143 ccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttttttggag 16839044  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
    |||           ||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| || |||    
T  16839043 aga-----------accttgagagagcttaagaga-gaaaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagagtgtatcttag 16838956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 6005919 - 6005625
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6005919 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 6005820  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |      
T  6005819 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgctttttttg-- 6005722  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttactttgatgagagtgtttcgta 313  Q
            || | |||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  6005721 -------gaaaaaaaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttctta 6005630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 15 - 306
Target Start/End: Complemental strand, 5343977 - 5343697
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5343977 gagccaagtcttctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 5343878  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||   |||| ||    
T  5343877 cttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttcagggctggactagtatataaagtgttcttgtgctcatttgaag 5343778  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtg 306  Q
              |  |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  5343777 ----------gttaaccttgagagaacttaagaga-gaaaacttggatatcaaagatgggatcctttggggtgtgttcctttgatgagagtg 5343697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 28155158 - 28155450
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  28155158 gagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtcaa 28155257  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||  |||||||||||| ||||||       
T  28155258 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttg--- 28155354  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            || | |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||    
T  28155355 -------aaaaaaaaccttaagagaacttaagaga-gaaaacttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttag 28155446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 6438996 - 6438705
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  6438996 gagccaagtttgctggatgcataatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtcaa 6438897  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||  |||||||||||| ||||||       
T  6438896 cctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggaaggactagtatatattgtgttcttgtgcttttttg--- 6438800  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| |||    
T  6438799 --------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttag 6438709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 14737159 - 14737353
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  14737159 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 14737258  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggaga 215  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||||||    
T  14737259 gtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttggaga 14737353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 14742019 - 14742213
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  14742019 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 14742118  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggaga 215  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||||||    
T  14742119 gtccgttgcagatcgtgacacgatctaaggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttggaga 14742213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 22010282 - 22010472
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||    
T  22010282 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgg 22010381  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||||| |   ||||||||| ||  |||||||||||| ||||||    
T  22010382 gtccgttgcaaatcgtgacacgatctagggaaatcgtggcacgatttcttcagagggagactagtatatattgtgttcttgtgcttttttg 22010472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 210
Target Start/End: Complemental strand, 11857474 - 11857286
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || | |||||||||||| |||||| | ||    
T  11857474 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtcaaccttgg 11857375  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 210  Q
    | |||||||| ||||||||||||| | |||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| |||||    
T  11857374 gtccgttgcaaatcgtgacacgat-ttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgctttttt 11857286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 5266579 - 5266487
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 113  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||  ||||||||||||||||    
T  5266579 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtca 5266487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 214
Target Start/End: Original strand, 5674338 - 5674515
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatc 134  Q
    |||||||| ||| ||||||||||||||||||||||||  |||||||||| ||||| ||||  |||||||||||||||| || | |||||    ||| |||    
T  5674338 aaatcgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggacgtacgcaaatc 5674437  T
Q  135 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    ||||||||||||  |||||||||| |||||||   |||| | | | |||||||||||||||||||||||||  |||||||    
T  5674438 gtgacacgatct--ggaaatcgtgacacgattgtatcagaggaaggctagtatttaaagtgttcttgtgcagatttggag 5674515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 30125111 - 30125185
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatc 95  Q
    ||||||| ||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  30125111 agtttgcaggacgccaaatcgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 6136440 - 6136363
Alignment:
Q  35 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  6136440 aaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6136363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 33342580 - 33342503
Alignment:
Q  36 aaatcgtggcacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| | |||||||||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  33342580 aaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 33342503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 6026942 - 6027018
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| ||||  |||||||||| ||||    
T  6026942 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtc 6027018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 22709536 - 22709460
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  22709536 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtc 22709460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 16578996 - 16578917
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||||||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16578996 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16578917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 16616384 - 16616463
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||||||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16616384 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16616463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 13150957 - 13151034
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  13150957 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 13151034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 34164552 - 34164629
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  34164552 aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 34164629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 34166774 - 34166851
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  34166774 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 34166851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 25420905 - 25420981
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  25420905 aaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25420981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 16554559 - 16554638
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||| |||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16554559 gcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16554638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 16631115 - 16631194
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||| |||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16631115 gcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16631194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 2171995 - 2171941
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| |||||    
T  2171995 aaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaa 2171941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 3073234 - 3073065
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgca--ga 132  Q
    |||||||| ||||||  | ||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||| || | ||||  | ||||   |    
T  3073234 aaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggatggatgcactaa 3073135  T
Q  133 tcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    |||| |||||||||  |||||||||| ||||||||  |||| | ||| ||||||||| |||||||||||||||    
T  3073134 tcgttacacgatct--ggaaatcgtgacacgattttatcagtggagggctagtattt-aagtgttcttgtgca 3073065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 27647573 - 27647652
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||||||  || ||||||||||||||||   |||||||||| ||||| ||||  |||||  ||||||||    
T  27647573 gcaaaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgactggtc 27647652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 411794 - 411872
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaactatctctgataaggactggtca 113  Q
    |||||||| ||||||  ||||||||||||||||||||  | ||||||||| ||||| | ||  ||||||||||||||||    
T  411794 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 411872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 5757060 - 5757114
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    ||||||||| ||||| ||| |||||||||||||||||   |||||||||||||||    
T  5757060 aaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaa 5757114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 23896848 - 23896794
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    ||||||||| ||||| ||| |||||||||||||||||   |||||||||||||||    
T  23896848 aaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaa 23896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 2672506 - 2672808
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2672506 gagccaagtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 2672605  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  2672606 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaag 2672705  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  2672706 agaaccttaagacaaccttgagagaacttaagaga-gaaaacttggaggtcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttag 2672804  T
Q  315 gttg 318  Q
    ||||    
T  2672805 gttg 2672808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 2676662 - 2676964
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  2676662 gagccaagtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtcaa 2676761  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  2676762 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaag 2676861  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  2676862 agaaccttaagacaaccttgagagaacttaagaga-gaaaacttggaggtcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttag 2676960  T
Q  315 gttg 318  Q
    ||||    
T  2676961 gttg 2676964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 19 - 318
Target Start/End: Complemental strand, 18656937 - 18656639
Alignment:
Q  19 caagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttg 118  Q
    ||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||    
T  18656937 caagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctg 18656838  T
Q  119 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaa 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||    
T  18656837 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagacaa 18656738  T
Q  219 cctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtaggttg 318  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||    
T  18656737 ccttaagacaaccttgagagaacttaagaga-gaaaacttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttg 18656639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 10 - 318
Target Start/End: Complemental strand, 24968622 - 24968315
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  24968622 gcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactg 24968523  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||    
T  24968522 gtcaacctggggaccgttgcaaatcgtgccacgatctagggaaatcgtggcacgatttcttcagggcaagactagtatttaaagtgttcttgtgcttatt 24968423  T
Q  210 tggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgttt 309  Q
    || |  |   || ||||||| ||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  24968422 tgaaagggggcttaagacaatcttgagagagctcaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtat 24968324  T
Q  310 cgtaggttg 318  Q
    | |||||||    
T  24968323 cttaggttg 24968315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 10 - 318
Target Start/End: Complemental strand, 8512745 - 8512425
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8512745 gcagtgagctaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 8512646  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||    
T  8512645 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttt 8512546  T
Q  210 tg-------------gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttacttt 296  Q
    ||             |||| ||||| ||||||||||||||||     |||||| || |||||||||||||||||||||||||||||||||||||| ||||    
T  8512545 tgaaggtaaccttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttccttt 8512447  T
Q  297 gatgagagtgtttcgtaggttg 318  Q
    ||||||||||| || |||||||    
T  8512446 gatgagagtgtatcttaggttg 8512425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 10 - 318
Target Start/End: Complemental strand, 8517625 - 8517305
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8517625 gcagtgagctaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 8517526  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||    
T  8517525 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttt 8517426  T
Q  210 tg-------------gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttacttt 296  Q
    ||             |||| ||||| ||||||||||||||||     |||||| || |||||||||||||||||||||||||||||||||||||| ||||    
T  8517425 tgaaggtaaccttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttccttt 8517327  T
Q  297 gatgagagtgtttcgtaggttg 318  Q
    ||||||||||| || |||||||    
T  8517326 gatgagagtgtatcttaggttg 8517305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 10 - 306
Target Start/End: Complemental strand, 32475989 - 32475704
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| ||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32475989 gcagtgagccaagttctctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 32475890  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||    
T  32475889 gtcatcttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctcatt 32475790  T
Q  210 tggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtg 306  Q
    || ||          |  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  32475789 tgaag----------gttaaccttgagagaacttaagagagg-aaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagagtg 32475704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 306
Target Start/End: Complemental strand, 32480847 - 32480562
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| ||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32480847 gcagtgagccaagttctctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 32480748  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||   ||    
T  32480747 gtcatcttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttctaggcaggactagtatttaaagtgttcttgtgctcatt 32480648  T
Q  210 tggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtg 306  Q
    || ||          |  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  32480647 tgaag----------gttaaccttgagagaacttaagagagg-aaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagagtg 32480562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 28503412 - 28503602
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  28503412 agtttgctggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgg 28503511  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | | |  ||| ||||||||||||||| ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||| ||||||    
T  28503512 gtcagacgcaaatcgtgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttg 28503602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 167
Target Start/End: Original strand, 22172755 - 22172900
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| | ||    
T  22172755 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtcaaccttgg 22172854  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgattt 167  Q
      |||||||| ||||||||||||| | ||||||||||||||||||||    
T  22172855 ttccgttgcaaatcgtgacacgat-ttgggaaatcgtggcacgattt 22172900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 36 - 211
Target Start/End: Original strand, 28501260 - 28501435
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 135  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||| | |  ||| |||     
T  28501260 aaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgggtcagacgcaaatca 28501359  T
Q  136 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    ||||||||||| ||||||||||||||||||| |||||| | | ||||||||| ||  |||| ||||||| ||||||    
T  28501360 tgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtacttgtgcttttttg 28501435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 40372349 - 40372532
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| || |||    
T  40372349 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgg 40372448  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    | || |  ||| |||||| ||||||||  |||||||||| |||||||||||||| | | ||||||||| ||  |||||||||||||    
T  40372449 gaacggacgcaaatcgtgccacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgca 40372532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 7167789 - 7167606
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| || | |    
T  7167789 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttg 7167690  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    || | |  ||| ||||||||||||| |  | ||||| ||||||||||||||||| | | ||||||||| ||  |||||||||||||    
T  7167689 ggtcagacgcaaatcgtgacacgattt--gaaaatcatggcacgatttcttcagaggaagactagtatatattgtgttcttgtgca 7167606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 8738616 - 8738805
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| || | |    
T  8738616 agtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 8738715  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | || |  ||| ||||||||| |||||  |||||||||||||||||| |||||| | | | ||||||| ||  |||||||||||| ||||||    
T  8738716 gaacggacgcaaatcgtgacatgatct--ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttg 8738805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 9090854 - 9091043
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| || | |    
T  9090854 agtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 9090953  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | || |  ||| ||||||||| |||||  |||||||||||||||||| |||||| | | | ||||||| ||  |||||||||||| ||||||    
T  9090954 gaacggacgcaaatcgtgacatgatct--ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttg 9091043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 27352189 - 27352325
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatc 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| || | ||||| |  ||| |||    
T  27352189 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatc 27352288  T
Q  135 gtgacacgatctagggaaatcgtggcacgatttcttcag 173  Q
    |||||||||| |  |||||||||||||||||| ||||||    
T  27352289 gtgacacgattt--ggaaatcgtggcacgattgcttcag 27352325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 8477909 - 8477717
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  |||||||||||||||| || | |    
T  8477909 agtttgctggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttg 8477810  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg--catttttgga 213  Q
    ||      ||| |||||||||||||||  |||||||||| ||||||| |||||| | | | ||||||||| |||||||||||||  ||||||||||    
T  8477809 ggttgtacgcaaatcgtgacacgatct--ggaaatcgtgacacgattgcttcagaggaaggctagtattt-aagtgttcttgtgttcatttttgga 8477717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 2671158 - 2671250
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 113  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  ||||||||||||||||    
T  2671158 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtca 2671250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 54634815 - 54634894
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||||||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  54634815 gcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 54634894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 4598999 - 4598922
Alignment:
Q  36 aaatcgtggcacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| | |||||||||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  4598999 aaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 4598922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 4601220 - 4601143
Alignment:
Q  36 aaatcgtggcacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| | |||||||||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  4601220 aaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 4601143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 10208886 - 10208963
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10208886 aaatcgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtc 10208963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 25637121 - 25637197
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||||||||||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  25637121 aaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25637197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 6716190 - 6716269
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||| ||||||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  6716190 gcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6716269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 6718374 - 6718453
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||| ||||||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  6718374 gcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 1306495 - 1306441
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    |||||||| |||||||||||||||||||||||||||||  ||||||||| |||||    
T  1306495 aaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaa 1306441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 10055913 - 10055990
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10055913 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10055990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 10058135 - 10058212
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10058135 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 10060357 - 10060434
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10060357 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10060434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 10062579 - 10062656
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10062579 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 10064801 - 10064878
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10064801 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 10067023 - 10067100
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10067023 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10067100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 10211086 - 10211163
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| |||||||| || |||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10211086 aaatcgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10211163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 45282671 - 45282750
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  45282671 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 45282750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 7782525 - 7782455
Alignment:
Q  132 atcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    |||||||||||||||  |||||||||| ||||||||  |||| | ||| ||||||||| |||||||||||||||    
T  7782525 atcgtgacacgatct--ggaaatcgtgacacgattttatcagtggagggctagtattt-aagtgttcttgtgca 7782455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 800794 - 800870
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| ||||| | ||  ||||||||| |||||    
T  800794 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtc 800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 5 - 318
Target Start/End: Original strand, 43988026 - 43988339
Alignment:
Q  5 gagaagcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataag 104  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  43988026 gagaggcagtgagccaagtttgctggaagcaaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataag 43988125  T
Q  105 gactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 204  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43988126 gactggtcaacttggggaccgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgctcttgtgc 43988225  T
Q  205 a-tttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgaga 303  Q
    | |||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43988226 attttttggagataaccttaagacaaccttgagagaacttaagaga-gaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgaga 43988324  T
Q  304 gtgtttcgtaggttg 318  Q
    ||||||| |||||||    
T  43988325 gtgtttcttaggttg 43988339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 25439486 - 25439776
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  25439486 gagccaagtttgcaggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtcaa 25439585  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||       
T  25439586 cctggggactgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgc-tttttg--- 25439681  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| |||    
T  25439682 --------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttag 25439772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 25444679 - 25444969
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  25444679 gagccaagtttgtaggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtcaa 25444778  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||       
T  25444779 cctagggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgc-tttttg--- 25444874  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| |||    
T  25444875 --------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttag 25444965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 39445995 - 39445704
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||| ||||||||||||||||||    
T  39445995 gagccaagtttgcaggacgccaaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtcaa 39445896  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||       
T  39445895 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttg--- 39445799  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| |||    
T  39445798 --------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttag 39445708  T

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Target: chr1; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 44023464 - 44023754
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  44023464 gagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaa 44023563  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||  |||||||||||| ||||||       
T  44023564 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactggtatatattgtgttcttgtgc-tttttg--- 44023659  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            | || |||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| |||    
T  44023660 --------aggataaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttag 44023750  T

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Target: chr1; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 1054601 - 1054892
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  1054601 gagccaagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtcaa 1054700  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||  |||||||||||| ||||||       
T  1054701 cctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttg--- 1054797  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| |||    
T  1054798 --------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttag 1054888  T

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Target: chr1; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 41391093 - 41390903
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||| ||||||||||||||||  |||| |||| ||||||||||||||||||| ||||    
T  41391093 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggg 41390994  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||    
T  41390993 gtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 41390903  T

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Target: chr1; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 41398748 - 41398558
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||  |||||||||||||||||| ||||    
T  41398748 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcattgataaggactggtcaacctggg 41398649  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||    
T  41398648 gtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 41398558  T

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Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 24786918 - 24787107
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc-aacttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| ||| | |    
T  24786918 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttg 24787017  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    || | |  ||| |||||||||||||||  |||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||| ||||||    
T  24787018 ggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttg 24787107  T

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Target: chr1; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 24793740 - 24793921
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc-aacttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| ||| | |    
T  24793740 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttg 24793839  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 203  Q
    || | |  ||| |||||||||||||||  |||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||    
T  24793840 ggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 24793921  T

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Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 44203326 - 44203402
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  44203326 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 44203402  T

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Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 205
Target Start/End: Original strand, 9986894 - 9987063
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgca--ga 132  Q
    |||||||| |||||| |||||||||||||||||||||   ||||||||| ||||| | ||  | |||||||||||||| || | ||||| | ||||   |    
T  9986894 aaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttgggacggatgcaccaa 9986993  T
Q  133 tcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    ||||||||||||||  |||||||||| ||| ||||  |||| | ||| ||||||||| |||||||||||||||    
T  9986994 tcgtgacacgatct--ggaaatcgtgacacaattttatcagtggagggctagtattt-aagtgttcttgtgca 9987063  T

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Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 20622712 - 20622635
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 113  Q
    |||||||| ||||||  ||||||||||||||||||||  |||||||||| ||||| ||||  ||||||||||||||||    
T  20622712 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtca 20622635  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 19361021 - 19361075
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| |||||    
T  19361021 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 19361075  T

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Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 19365877 - 19365931
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| |||||    
T  19365877 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 19365931  T

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Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 51765099 - 51765176
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 113  Q
    |||||||| |||||||||| | |||||||||||||||   ||||||||| ||||| | ||  ||||||||||||||||    
T  51765099 aaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtca 51765176  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 24202360 - 24202521
Alignment:
Q  57 aaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc--aacttggg--gaccgttgcagatcgtgacacgatctagggaa 152  Q
    ||||||||||||||||   ||||||||| ||||| ||||  |||||||||||||||  | ||||||  |  |||| || |||||||||||||||  ||||    
T  24202360 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgtt-caaatcgtgacacgatct--ggaa 24202456  T
Q  153 atcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcat-ttttggagaga 217  Q
    |||||| |||||||   |||| | | | ||||||||| |||||||||||||||| |||||||||||    
T  24202457 atcgtgacacgattgtatcagaggaaggctagtattt-aagtgttcttgtgcatattttggagaga 24202521  T

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Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 21053648 - 21053726
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaactatctctgataaggactggtca 113  Q
    |||||||| ||||||  ||||||||||||||||||||  | ||||||||| ||||| | ||  ||||||||||||||||    
T  21053648 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 21053726  T

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Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 33791816 - 33791524
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33791816 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 33791717  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||      
T  33791716 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg-- 33791619  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttactttgatgagagtgtttcgta 313  Q
             ||| |||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  33791618 ---------agataaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttctta 33791529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 2785875 - 2785583
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2785875 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 2785776  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||      
T  2785775 cctggggagcgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg-- 2785678  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttactttgatgagagtgtttcgta 313  Q
             ||| |||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  2785677 ---------agataaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttctta 2785588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 33768684 - 33768392
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33768684 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 33768585  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||      
T  33768584 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcatgactagtatttaaagtgttcttgtgcttttttgg-- 33768487  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttactttgatgagagtgtttcgta 313  Q
             ||| |||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  33768486 ---------agataaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttctta 33768397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 318
Target Start/End: Original strand, 31396566 - 31396868
Alignment:
Q  4 ggagaagcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataa 103  Q
    ||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| | ||||||||||    
T  31396566 ggagaggcagtgagctaagtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagacacttgttggttaagtttctctgataa 31396665  T
Q  104 ggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  31396666 ggactggtcaacctggggaccgttgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtg 31396765  T
Q  204 catttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgaga 303  Q
    | ||||||           ||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  31396766 cttttttg-----------aagacaaccttgagagagcttaagaga-gaaaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgaga 31396853  T
Q  304 gtgtttcgtaggttg 318  Q
    |||| || |||||||    
T  31396854 gtgtatcttaggttg 31396868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 318
Target Start/End: Original strand, 31401423 - 31401725
Alignment:
Q  4 ggagaagcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataa 103  Q
    ||||| |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||    
T  31401423 ggagaggcagtgagctaagtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacatgattcagaaacttgctgcttaagtttctctgataa 31401522  T
Q  104 ggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  31401523 ggactggtcaacctggggaccgttgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtg 31401622  T
Q  204 catttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgaga 303  Q
    | ||||||           ||||||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  31401623 cttttttg-----------aagacaaccttgagagagcttaagaga-caaaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgaga 31401710  T
Q  304 gtgtttcgtaggttg 318  Q
    |||| || |||||||    
T  31401711 gtgtatcttaggttg 31401725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 28807163 - 28807454
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  28807163 gagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtcaa 28807262  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||   ||||||||||| ||||||       
T  28807263 cctggggaccgttgcagatcgtgacacgatctagggaactcgtggcacgatttcttcagggcaggactagtatatattatgttcttgtgcttttttg--- 28807359  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            |||| |||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  28807360 --------aagagaaccttaagagagcttaagaga-gaaaacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttag 28807450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 36 - 318
Target Start/End: Original strand, 37561055 - 37561325
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 135  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  37561055 aaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggttaacctggggaccgttgcagatcg 37561154  T
Q  136 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaacctcaagacaaccttga 235  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||| ||||||||| ||||      ||     
T  37561155 tgacatgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagagaaccttaaga------tg- 37561247  T
Q  236 gagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtaggttg 318  Q
         ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||    
T  37561248 ----gcttaagaga-gaaaacttggagatcaaagaggggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttg 37561325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 36 - 318
Target Start/End: Original strand, 37556233 - 37556503
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 135  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||| |||  | ||||||||||||||||    
T  37556233 aaatcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggttaaccagaggaccgttgcagatcg 37556332  T
Q  136 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaacctcaagacaaccttga 235  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||||||| |||||| ||||||||| ||||      ||     
T  37556333 tgacacgatctagggaaatcatggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagagaaccttaaga------tg- 37556425  T
Q  236 gagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtaggttg 318  Q
         ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||    
T  37556426 ----gcttaagaga-gaaaacttggagatcaaagaggggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttg 37556503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 15045187 - 15044997
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||||||||||||| ||||    
T  15045187 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggg 15045088  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||    
T  15045087 gtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 15044997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 1456746 - 1456920
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||| | | |||| ||||    
T  1456746 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtctaccttgggtcagatgcaaatcg 1456845  T
Q  136 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 210  Q
    ||||||| ||| ||||||||||||||||||||||| || | | ||||||||| ||  |||||||||||| |||||    
T  1456846 tgacacggtcttgggaaatcgtggcacgatttctttagaggaagactagtatatattgtgttcttgtgctttttt 1456920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 31180756 - 31180568
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||| |||| || ||||| |||| ||||||||||||||||||| | ||    
T  31180756 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgttaagtatcactgataaggactggtcaaccttgg 31180657  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    | | |  ||| ||||||||| ||||| ||||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||| ||||    
T  31180656 gtcagacgcaaatcgtgacatgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttt 31180568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 210
Target Start/End: Complemental strand, 27445473 - 27445285
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  27445473 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 27445374  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 210  Q
    | | |  ||| ||||||||||||| | ||||||||||||||||||| |||||| | | | ||||||| ||  |||||||||||| |||||    
T  27445373 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgctttttt 27445285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 210
Target Start/End: Complemental strand, 27450316 - 27450128
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  27450316 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 27450217  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 210  Q
    | | |  ||| ||||||||||||| | ||||||||||||||||||| |||||| | | | ||||||| ||  |||||||||||| |||||    
T  27450216 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgctttttt 27450128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 43599224 - 43599043
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  43599224 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 43599125  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 203  Q
    | | |  ||| ||||||||||||| | ||||||||||| ||||||| |||||| | | | ||||||| ||  |||||||||||    
T  43599124 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43599043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 43604716 - 43604535
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  43604716 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 43604617  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 203  Q
    | | |  ||| ||||||||||||| | ||||||||||| ||||||| |||||| | | | ||||||| ||  |||||||||||    
T  43604616 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 43610208 - 43610027
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  43610208 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 43610109  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 203  Q
    | | |  ||| ||||||||||||| | ||||||||||| ||||||| |||||| | | | ||||||| ||  |||||||||||    
T  43610108 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 210
Target Start/End: Complemental strand, 43592779 - 43592591
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||    
T  43592779 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 43592680  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 210  Q
    | | |  ||| ||||||||||||| | ||||||||||| ||||||| |||| | | | | ||||||| ||  |||||||||||| |||||    
T  43592679 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtgacacgattgcttcggaggaaggctagtatatattgtgttcttgtgctttttt 43592591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 30631855 - 30631762
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||| ||| || |||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  30631855 agtttgcaggacgccaaatcgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaa 30631762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 24136375 - 24136198
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatc 134  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||| ||||  |||||||||||||||| || | |||||    ||| |||    
T  24136375 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgcaaatc 24136276  T
Q  135 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    ||||||||||||  ||||||||||||||||||   |||| | |   ||||||| ||||||||||||||||||||||||||    
T  24136275 gtgacacgatct--ggaaatcgtggcacgattgtatcagaggaaagctagtatataaagtgttcttgtgcatttttggag 24136198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 29402643 - 29402728
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataagga 106  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  29402643 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 25077814 - 25077890
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  25077814 aaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 25077890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 25135783 - 25135859
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  25135783 aaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 25135859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 10592948 - 10593027
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||||||||||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  10592948 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtc 10593027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 22536747 - 22536668
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| ||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  22536747 gcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 22536668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 26177575 - 26177651
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||| ||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  26177575 aaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 26177651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 38219921 - 38219845
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||||||||||||| |||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  38219921 aaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactggtc 38219845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 211
Target Start/End: Complemental strand, 29751615 - 29751461
Alignment:
Q  57 aaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatcgtgacacgatctagggaaatc 155  Q
    ||||||||||||||||  |||||||||| ||||| ||||  |||||||||||||||| || | |||      ||| ||||||||||||| | || |||||    
T  29751615 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgat-ttggaaaatc 29751517  T
Q  156 gtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    ||| ||||||| ||| || | | | ||||||| |||||||||||||||||| ||||    
T  29751516 gtgacacgattgctttagaggaaggctagtatataaagtgttcttgtgcatctttg 29751461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 9789700 - 9789624
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  9789700 aaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtc 9789624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 18442124 - 18442048
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  18442124 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 18442048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 16544099 - 16544178
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16544099 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16544178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 16546321 - 16546400
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  16546321 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16546400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 40379783 - 40379862
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  40379783 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 40379862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 40381994 - 40382073
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  40381994 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 40382073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 9352916 - 9352970
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    |||||||||||||||  || |||||||||||||||||   |||||||||||||||    
T  9352916 aaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaa 9352970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 29720074 - 29720152
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaactatctctgataaggactggtca 113  Q
    |||||||| ||||||  ||||||||||||||||||||  | ||||||||| ||||| | ||  ||||||||||||||||    
T  29720074 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 29720152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 10593044 - 10593119
Alignment:
Q  128 gcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    ||||||||||||||||| | ||||||||||| |||||||||  ||| | | ||||||||| | |||||||||||||||    
T  10593044 gcagatcgtgacacgat-ttgggaaatcgtgacacgatttcaacagaggaagactagtatgt-aagtgttcttgtgca 10593119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 16407750 - 16407826
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||||||| | |||||||||||||||   ||||||||| ||||| | ||  |||||||||| ||||    
T  16407750 aaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtc 16407826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 16409186 - 16409262
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||| ||| |||||||||| | |||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  16409186 aaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 16409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 26170466 - 26170542
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||| |||||||||||||||  |||   ||||||||| ||||| | ||  |||||||||||||||    
T  26170466 aaatcgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtc 26170542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 35745891 - 35745599
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  35745891 gagccaagtttgttggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtcaa 35745792  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||      
T  35745791 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg-- 35745694  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttactttgatgagagtgtttcgta 313  Q
             ||| |||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  35745693 ---------agataaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttctta 35745604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 318
Target Start/End: Original strand, 10683832 - 10684141
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  10683832 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaacttggg 10683931  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg--------- 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||             
T  10683932 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaacc 10684031  T
Q  212 ----gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgt 307  Q
        |||| ||||| ||||||||||||||||     |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10684032 ttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttcctttgatgagagtgt 10684130  T
Q  308 ttcgtaggttg 318  Q
     || |||||||    
T  10684131 atcttaggttg 10684141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 39784412 - 39784703
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  39784412 gagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaa 39784511  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||       
T  39784512 cctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg--- 39784608  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            |||| |||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||  |||||||||||| || || |||    
T  39784609 --------aagagaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtctcttag 39784699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 25327757 - 25327947
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  25327757 agtttgcaggacgccaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 25327856  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||    
T  25327857 gtccgttgcagctcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 25327947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 6311842 - 6311652
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||||| |||||| | ||    
T  6311842 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgg 6311743  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | | | |||| |||||||||||||   ||||||||||||||| |||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  6311742 gtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 6311652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 7289521 - 7289711
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||    
T  7289521 agtttgcaggacgccaaatcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtctaccttgg 7289620  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
      | | |||| ||||||||||||||| |||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  7289621 atcagatgcaaatcgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 7289711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 10688692 - 10688882
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||||| |||||| | ||    
T  10688692 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgg 10688791  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | | | |||| |||||||||||||   ||||||||||||||| |||||||||| | | ||||||||| ||  ||||||||||||| |||||    
T  10688792 gtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgcagttttg 10688882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 18852720 - 18852909
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| || | |    
T  18852720 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttg 18852819  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    || | |  ||||||||||||||||| |  |||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||| ||||||    
T  18852820 ggtcagacgcagatcgtgacacgattt--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttg 18852909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 18870114 - 18870303
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || |||||||||||||| || | |    
T  18870114 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttg 18870213  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    || | |  ||||||||||||||||| |  | |||||||||||||||| |||||| | | ||||||||| ||  |||||||||||| ||||||    
T  18870214 ggtcagacgcagatcgtgacacgattt--gaaaatcgtggcacgattgcttcagagaaagactagtatatattgtgttcttgtgcttttttg 18870303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 30656189 - 30656008
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc-aacttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| ||| | |    
T  30656189 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttg 30656090  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 203  Q
    || | |  ||| |||||||||||||||  |||||||||||||||||| |||||| | | ||||||||| ||  |||||||||||    
T  30656089 ggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 30656008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 4759627 - 4759809
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||  |||||||||||||||| || | |    
T  4759627 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttg 4759726  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgc 204  Q
    | || |  ||| |||||||||||||||  |||||||||| |||||||||||||| | | ||||||||| ||  ||||||||||||    
T  4759727 gaacggacgcaaatcgtgacacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 4759809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 36979921 - 36979741
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| || | |    
T  36979921 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttg 36979822  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 203  Q
    ||      ||| |||||||||||||||  |||||||||||||||||| |||||| | | | ||||||||| |||||||||||||    
T  36979821 ggttgtacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtattt-aagtgttcttgtg 36979741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 211
Target Start/End: Original strand, 1261523 - 1261699
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggac---cgttgcag 131  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||| ||||  |||||||||||||||| || | |||||   |||| ||     
T  1261523 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacatacgtt-caa 1261621  T
Q  132 atcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    |||||||||||||||  |||||||||| ||||||||  |||| | | | |||||||||||||||||||||||| ||||||    
T  1261622 atcgtgacacgatct--ggaaatcgtgacacgattttatcagaggaaggctagtatttaaagtgttcttgtgcttttttg 1261699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 33037380 - 33037472
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 113  Q
    ||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||    
T  33037380 agtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 33037472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 3439193 - 3439271
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||| |||||| ||||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  3439193 gcaaaatcgtgacacgat-ttgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 3439271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 25689646 - 25689725
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||||||  ||||||||||| |||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  25689646 gcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 42575801 - 42575724
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  42575801 aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 42575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 15290251 - 15290327
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggt 111  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  ||||||||||||||    
T  15290251 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggt 15290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 15470620 - 15470696
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggt 111  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  ||||||||||||||    
T  15470620 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggt 15470696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 25327952 - 25328021
Alignment:
Q  237 agaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgt 307  Q
    |||||||||||||| | ||||||||||||||||  |||||||| |||| |||||  |||||||||||||||    
T  25327952 agaacttaagagag-agaacttggagatcaaaggagggatcctatgggttgtgtgtctttgatgagagtgt 25328021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 25328078 - 25328147
Alignment:
Q  237 agaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgt 307  Q
    |||||||||||||| | ||||||||||||||||  |||||||| |||| |||||  |||||||||||||||    
T  25328078 agaacttaagagag-agaacttggagatcaaaggagggatcctatgggttgtgtgtctttgatgagagtgt 25328147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 2627427 - 2627503
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||||||||||||||||   ||||||||| ||||| | ||  ||||||||| |||||    
T  2627427 aaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtc 2627503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 26288408 - 26288332
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||| |||||||||||||||||||| |||   ||||||||| ||||| | ||  |||||||||||||||    
T  26288408 aaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26288332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 26301665 - 26301589
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||| |||||||||||||||||||| |||   ||||||||| ||||| | ||  |||||||||||||||    
T  26301665 aaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 26313659 - 26313583
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||| |||||||||||||||||||| |||   ||||||||| ||||| | ||  |||||||||||||||    
T  26313659 aaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26313583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 211; Significance: 1e-115; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 19344922 - 19344630
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19344922 gagccaagtttgctggaagcaaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 19344823  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||      
T  19344822 cctggggaccgttgcagatcatgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg-- 19344725  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttactttgatgagagtgtttcgta 313  Q
             ||| |||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  19344724 ---------agataaccttaagagagcttaagaga-gaaaacttggagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttctta 19344635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 19349780 - 19349488
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  19349780 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtcaa 19349681  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||      
T  19349680 cctgaggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg-- 19349583  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaaga-ggggatcctttggggtgtgttactttgatgagagtgtttcgta 313  Q
             ||| |||||| ||||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  19349582 ---------agataaccttaagagagcttaagaga-gaaaacttagagatcaaagatggggatcctttggggtgtgttcctttgatgagagtgtttctta 19349493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 57 - 318
Target Start/End: Complemental strand, 32247244 - 32246993
Alignment:
Q  57 aaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcg 156  Q
    |||||||| ||||||||||||||||||| ||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32247244 aaatcgtggcacgattcagaaacttgctcgttaagtatcactgataaagactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcg 32247145  T
Q  157 tggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaac 256  Q
    ||||||||||||||||||| ||||||||||| ||  |||||||||||| |||||          | |||| |||||| ||||||||||||||| ||||||    
T  32247144 tggcacgatttcttcaggggaggactagtatatattgtgttcttgtgccttttt---------ttgaagataaccttaagagaacttaagaga-gaaaac 32247055  T
Q  257 ttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtaggttg 318  Q
    |||||||||||||||||| |||| ||||||||||  |||||||||||||||||| |||||||    
T  32247054 ttggagatcaaagagggggtcctatggggtgtgtgcctttgatgagagtgtttcttaggttg 32246993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 39811568 - 39811760
Alignment:
Q  19 caagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttg 118  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||  | |     
T  39811568 caagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtctgcctt 39811667  T
Q  119 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  39811668 ggggccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 39811760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 214
Target Start/End: Original strand, 9295955 - 9296147
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||  |||||||||||||||| || | |    
T  9295955 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttg 9296054  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    || | |  ||| |||||||||||||||  | |||||||| ||||||| |||||| | | |||||||||||||||||||||||||| |||||||||    
T  9296055 ggtcggacgcaaatcgtgacacgatct--gaaaatcgtgacacgattgcttcagaggaagactagtatttaaagtgttcttgtgcttttttggag 9296147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 14292032 - 14291849
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||||||| || | |    
T  14292032 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttg 14291933  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    ||      ||| |||||||||||||||  ||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||||    
T  14291932 ggttgtacgcaaatcgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgca 14291849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 11098480 - 11098663
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc-aacttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| |||||||||||||||| ||| | |    
T  11098480 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttg 11098579  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    ||      ||| |||||||||||||||  ||||||||||||||||||||||||| | | |||||| || ||  |||||||||||||    
T  11098580 ggttgtacgcaaatcgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagcatatattgtgttcttgtgca 11098663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 12647859 - 12647783
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||||||||||  ||||||||||||||||||| || ||||||||| ||||| ||||  |||||||||||||||    
T  12647859 aaatcgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtc 12647783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 3492268 - 3492214
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  3492268 aaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaa 3492214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 25410157 - 25410081
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||| ||||  ||||||||| |||||    
T  25410157 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtc 25410081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 30833030 - 30833084
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| |||||    
T  30833030 aaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 30833084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 4484814 - 4484738
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||||||  | |||||||||||||||   ||||||||| ||||| | ||| |||||||||||||||    
T  4484814 aaatcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtc 4484738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 32247265 - 32247230
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgat 50  Q
    ||||||||||||||||| ||||||||||||||||||    
T  32247265 gagccaagtttgctggatgcaaaatcgtggcacgat 32247230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 28258759 - 28258813
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    |||||||||||| || ||| |||||||||||||||||   |||||||||||||||    
T  28258759 aaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaa 28258813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 32289257 - 32289333
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||| || |||||||||| | |||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  32289257 aaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtc 32289333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 209; Significance: 1e-114; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 4 - 318
Target Start/End: Original strand, 18740 - 19042
Alignment:
Q  4 ggagaagcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataa 103  Q
    ||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18740 ggagaggcagtgagctaagtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataa 18839  T
Q  104 ggactggtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtg 203  Q
     ||||||||| | |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18840 agactggtcatcctggggaccgttgcaaatcgtgacacgatctaaggaaatcgtggcacgatttcttcagggcaggactaatatttaaagtgttcttgtg 18939  T
Q  204 catttttggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgaga 303  Q
    | ||||||           ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  18940 cttttttg-----------aagacaaccttgagagaacttaagaga-gaaaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgaga 19027  T
Q  304 gtgtttcgtaggttg 318  Q
    ||||||| |||||||    
T  19028 gtgtttcttaggttg 19042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 10 - 318
Target Start/End: Original strand, 13866 - 14186
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13866 gcagtgagctaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 13965  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||    
T  13966 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttt 14065  T
Q  210 tg-------------gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttacttt 296  Q
    ||             |||| ||||| ||||||||||||||||     |||||| || |||||||||||||||||||||||||||||||||||||| ||||    
T  14066 tgaaggtaaccttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttccttt 14164  T
Q  297 gatgagagtgtttcgtaggttg 318  Q
    ||||||||||| || |||||||    
T  14165 gatgagagtgtatcttaggttg 14186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 10 - 318
Target Start/End: Original strand, 1821 - 2128
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  1821 gcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactg 1920  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | ||    
T  1921 gtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttatt 2020  T
Q  210 tggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgttt 309  Q
    || ||  ||||| ||||||||||||||||     |||||  || ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| |    
T  2021 tgaaggtaaccttaagacaaccttgagaggttggaagag-tgataacttggaggtcaaggaggggatcctttggggtgtgttcctttgatgagagtgtat 2119  T
Q  310 cgtaggttg 318  Q
    | |||||||    
T  2120 cttaggttg 2128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 10 - 318
Target Start/End: Original strand, 148526 - 148833
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  148526 gcagtgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactg 148625  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | ||    
T  148626 gtcaaccttgggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttatt 148725  T
Q  210 tggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgttt 309  Q
    || ||  ||||| ||||||||||||||||     |||||  || ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| |    
T  148726 tgaaggtaaccttaagacaaccttgagaggttggaagag-tgataacttggaggtcaaggaggggatcctttggggtgtgttcctttgatgagagtgtat 148824  T
Q  310 cgtaggttg 318  Q
    | |||||||    
T  148825 cttaggttg 148833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 10 - 318
Target Start/End: Original strand, 24265759 - 24266079
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24265759 gcagtgagctaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 24265858  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||    
T  24265859 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttt 24265958  T
Q  210 tg-------------gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttacttt 296  Q
    ||             |||| ||||| ||||||||||||||||     |||||| || |||||||||||||||||||||||||||||||||||||| ||||    
T  24265959 tgaaggtaaccttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttccttt 24266057  T
Q  297 gatgagagtgtttcgtaggttg 318  Q
    ||||||||||| || |||||||    
T  24266058 gatgagagtgtatcttaggttg 24266079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 10 - 306
Target Start/End: Complemental strand, 16880578 - 16880293
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  16880578 gcagtgagcctagtttgctggaagcaaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactg 16880479  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||    
T  16880478 gtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctcatt 16880379  T
Q  210 tggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtg 306  Q
    || ||          |  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  16880378 tgaag----------gttaaccttgagagaacttaagagagg-aaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagagtg 16880293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 306
Target Start/End: Complemental strand, 16885433 - 16885149
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  16885433 gcagtgagcctagtttgctggaagcaaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactg 16885334  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||    
T  16885333 gtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctcatt 16885234  T
Q  210 tggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtg 306  Q
    || ||          |  |||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  16885233 tgaag----------gttaaccttgagagaacttaagagagg-aaacttggagatcaaagatgggatccttt-gggtgtgttcctttgatgagagtg 16885149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 10 - 306
Target Start/End: Original strand, 24260903 - 24261188
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| |||||||||   ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24260903 gcagtgagccaagtaatctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 24261002  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||   ||    
T  24261003 gtcaacttgaggaccgttgaaaatcgtgacacgatctagggaaatcgtggcacgatttcatcaggacaggactagtatttaaagtgttcttgtgctcatt 24261102  T
Q  210 tggagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtg 306  Q
    || ||          |  |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  24261103 tgaag----------gttaaccttgagagaacttaagagagg-aaacttggagatcaaagatgggatcctttggggtgtgttcctttgatgagagtg 24261188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 33 - 318
Target Start/End: Original strand, 21811844 - 21812117
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcaga 132  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  21811844 gcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtcaacctggagaccgttgcaga 21811943  T
Q  133 tcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaacctcaagacaacct 232  Q
    | ||| |||||||| ||||||||||||||||||||  |||||||||||||||||| ||  |||||||||||| ||||||           |||  |||||    
T  21811944 ttgtgtcacgatcttgggaaatcgtggcacgatttactcagggcaggactagtatatattgtgttcttgtgcttttttg-----------aagctaacct 21812032  T
Q  233 tgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtaggttg 318  Q
    | ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  21812033 taagagaacttaagaga-gaaagcttggaggtcaaagaggggatcctttggggtgtgttcctttgatgagagtgtttcttaggttg 21812117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 24023912 - 24024100
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||    
T  24023912 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcaacctggg 24024011  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||  || ||||||||||||| ||||||    
T  24024012 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagta--tatagtgttcttgtgcttttttg 24024100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 31109163 - 31109354
Alignment:
Q  20 aagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttgg 119  Q
    |||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| |||  | | |    
T  31109163 aagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtctgccttg 31109262  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  31109263 gggccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 31109354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 4873628 - 4873438
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||||||||| |||  | | ||    
T  4873628 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtcttccttgg 4873529  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  4873528 gtccgttgcaaatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 4873438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 36 - 187
Target Start/End: Complemental strand, 12406749 - 12406598
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||| |||||||| ||||    
T  12406749 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaatcg 12406650  T
Q  136 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtat 187  Q
    ||||||||| | |||||||||||||||||||||||||| | | |||||||||    
T  12406649 tgacacgatttggggaaatcgtggcacgatttcttcagaggaagactagtat 12406598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 12397385 - 12397223
Alignment:
Q  48 gatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcgtgacacgatcta 147  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||| |||||||| ||||||||||||| |     
T  12397385 gatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaatcgtgacacgatttg 12397286  T
Q  148 gggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 210  Q
    |||||||||||||||||||||||||| | |  |||||||| ||  |||||||||||| |||||    
T  12397285 gggaaatcgtggcacgatttcttcagaggaatactagtatatattgtgttcttgtgccttttt 12397223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 2058512 - 2058329
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| || | |    
T  2058512 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 2058413  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    ||      ||| |||||||||||||||  |||||||||||||||||| |||||| | | | ||||||| ||  |||||||||||||    
T  2058412 ggttgtacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgca 2058329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 21640330 - 21640238
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 113  Q
    ||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||    
T  21640330 agtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 21640238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 20357121 - 20357214
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||  |||||||||| ||||||    
T  20357121 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaa 20357214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 211
Target Start/End: Original strand, 24789535 - 24789709
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatc 134  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||  |||||||||||||||| || | |||      ||| |||    
T  24789535 aaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatc 24789634  T
Q  135 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
     ||||||||| |  |||||||||| ||||||| |||||| | | | ||||||| |||||||||||||||||| ||||    
T  24789635 ttgacacgattt--ggaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttg 24789709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 202
Target Start/End: Original strand, 1533012 - 1533177
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggaccgttgcagatc 134  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||| || ||||| ||||  |||||||||||||| | || | |||||     || |||    
T  1533012 aaatcgtgacacgatcttgggaaatcgtgacacgattgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatc 1533111  T
Q  135 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgt 202  Q
    ||||||||||||  |||||||||||||||||| |||||| | | | ||||||| || |||||||||||    
T  1533112 gtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtatatatagtgttcttgt 1533177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 19992595 - 19992519
Alignment:
Q  241 cttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtaggttg 318  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||| |||||||    
T  19992595 cttaagagag-aaaacttggaggtcaaagaggggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttg 19992519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 6592813 - 6592737
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  6592813 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6592737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 6595029 - 6594953
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  6595029 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6594953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 18414166 - 18414090
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||||||||||||||| |||||||||  ||||||||| ||||| | ||  |||||||||||||||    
T  18414166 aaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtc 18414090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 20343596 - 20343684
Alignment:
Q  24 ttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||| ||| ||||||||||| ||||||  |||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  20343596 ttgccggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 20343684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 21646534 - 21646365
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggac---cgttgcag 131  Q
    |||||||| ||||||||||| ||||||||||||||||   ||||||||| ||||| ||||  ||||||| |||||||| || | |||||   |||| ||     
T  21646534 aaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttgggacgtacgtt-caa 21646436  T
Q  132 atcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    |||||| ||||||||  |||||||||| ||||||||  |||| | | | ||||||||| |||||||||||||||    
T  21646435 atcgtgccacgatct--ggaaatcgtgacacgattttatcagaggaaggctagtattt-aagtgttcttgtgca 21646365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 32060780 - 32060704
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| | || |||||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  32060780 aaatcgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 32060704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 1562479 - 1562403
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||| |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  1562479 aaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 1562403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 18409290 - 18409214
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||| || |||||||||| ||||||||||||||||||  ||||||||| ||||| | ||  |||||||||||||||    
T  18409290 aaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtc 18409214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 43504612 - 43504536
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||| ||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  43504612 aaatcgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 43504536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 48408507 - 48408583
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||||||| |||||||||||||||||   ||||||||| ||||| | |||  ||||||||||||||    
T  48408507 aaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtc 48408583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 25767437 - 25767361
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||||||||||||||||   ||||||||| ||||| | |||  ||||||||| ||||    
T  25767437 aaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtttctaggataaggacaggtc 25767361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 39731042 - 39731118
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||||||| | |||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  39731042 aaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 39731118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 18389239 - 18389160
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  18389239 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 18389160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 18392675 - 18392596
Alignment:
Q  33 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||| ||||| |||||| | || |||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  18392675 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 18392596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 10 - 318
Target Start/End: Original strand, 176532 - 176854
Alignment:
Q  10 gcagagagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactg 109  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  176532 gcagtgagctaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 176631  T
Q  110 gtcaacttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttt 209  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||    
T  176632 gtcaactttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttt 176731  T
Q  210 tg---------------gagagaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttact 294  Q
    ||               |||| ||||| ||||||||||||||||     |||||| || |||||||||||||||||||||||||||||||||||||| ||    
T  176732 tgaagaaaaaaccttaagagacaaccttaagacaaccttgagaggttggaagaga-gataacttggagatcaaagaggggatcctttggggtgtgttcct 176830  T
Q  295 ttgatgagagtgtttcgtaggttg 318  Q
    ||||||||||||| || |||||||    
T  176831 ttgatgagagtgtatcttaggttg 176854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 45347404 - 45347696
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  45347404 gagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaa 45347503  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||| ||  |||||||||||| ||||||       
T  45347504 cctgggaaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaaaactagtatatattgtgttcttgtgcttttttg--- 45347600  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||||| ||||||||||  ||||||||||||||| || |||    
T  45347601 --------aagacaaccttaagagagcttaagagagaaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtctcttag 45347692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 15 - 318
Target Start/End: Original strand, 45356885 - 45357176
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  45356885 gagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaa 45356984  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||  |||||||||||| ||||||       
T  45356985 cctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttctggggaggactagtatatattgtgttcttgtgcttttttg--- 45357081  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| |||    
T  45357082 --------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttag 45357172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 318
Target Start/End: Complemental strand, 5733155 - 5732869
Alignment:
Q  19 caagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttg 118  Q
    ||||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||    
T  5733155 caagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctg 5733056  T
Q  119 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  |||||||||||  |||||            
T  5733055 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtg--ttttt-------- 5732966  T
Q  219 cctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtaggttg 318  Q
      | ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||    
T  5732965 --tgaagacaaccttaagagagcttaagaga-gaaaacttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttg 5732869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 18856222 - 18855931
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  18856222 gagccaagtttgctggatgcaaaatcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaa 18856123  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||       
T  18856122 cctgggaaccgttgcagatcgtgacatgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg--- 18856026  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||| ||| |||||||| |  |||||||||||| ||||| |||    
T  18856025 --------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggagcctatggggtgtttgcctttgatgagagagtttcttag 18855935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 318
Target Start/End: Complemental strand, 3814514 - 3814228
Alignment:
Q  19 caagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttg 118  Q
    |||||||||  || || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||    
T  3814514 caagtttgcaagacgccaaatcgtgtcacgat-ttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctg 3814416  T
Q  119 gggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggagagaa 218  Q
     | ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| | ||||||||| ||  |||||||||||| ||||||           
T  3814415 agaaccgttgcagatcgtgacaagatctagggaaatcgtgacacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg------- 3814323  T
Q  219 cctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtaggttg 318  Q
        |||||||||||  |||| ||||||||| ||||||||||| |||||||  |||||||| ||||||||||  |||||||||||||||||| |||||||    
T  3814322 ----aagacaaccttaggagagcttaagaga-gaaaacttggacatcaaaggagggatcctatggggtgtgtgtctttgatgagagtgtttcttaggttg 3814228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 22 - 211
Target Start/End: Original strand, 9228780 - 9228969
Alignment:
Q  22 gtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttgggg 121  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | |||    
T  9228780 gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttggg 9228879  T
Q  122 accgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  9228880 tccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 9228969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 18712348 - 18712538
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  18712348 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 18712447  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | |||||| |||||||||||| ||||||| ||||||||||||||||||||||||| | ||||||||| ||  |||||||||||| ||||||    
T  18712448 gtccgttgaagatcgtgacacaatctaggaaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg 18712538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 9223992 - 9224182
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||    
T  9223992 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgg 9224091  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||||||||| ||  |||||||| ||| ||||||    
T  9224092 gtccgttgcagatcgtgacacgatctagggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttctgcttttttg 9224182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 34 - 211
Target Start/End: Original strand, 56141618 - 56141795
Alignment:
Q  34 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagat 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| || | ||| | | |||| ||    
T  56141618 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagatgcaaat 56141717  T
Q  134 cgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    ||||||||||||| |||||||||||||||||||||||||| | | ||||||||| ||  |||||||||||| ||||||    
T  56141718 cgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttg 56141795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 24742484 - 24742301
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttgg 119  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||| || |||    
T  24742484 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgg 24742385  T
Q  120 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    | || |  ||| |||||| ||||||||  |||||||||| |||||||||||||| | | ||||||||| ||  |||||||||||||    
T  24742384 gaacggacgcaaatcgtgccacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgca 24742301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 21 - 210
Target Start/End: Complemental strand, 51520957 - 51520769
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||||| || || | ||    
T  51520957 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatctaccttgg 51520858  T
Q  121 gaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 210  Q
    | | |  ||| ||||||||||||| | ||||||||||||||| ||| |||||| | | | ||||||| ||  |||||||||||| |||||    
T  51520857 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtggcacaattgcttcagaggaaggctagtatatattgtgttcttgtgctttttt 51520769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 29761165 - 29761073
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca 113  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||    
T  29761165 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 29761073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 7122375 - 7122451
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  7122375 aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7122451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 7124597 - 7124673
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  7124597 aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7124673  T

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Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 8393090 - 8393166
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||||||||||| | || ||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  8393090 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtc 8393166  T

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Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 28468086 - 28468162
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||||||| ||||||||||||||||   ||||||||| ||||| | ||| |||||||||||||||    
T  28468086 aaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtc 28468162  T

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Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 13992770 - 13992592
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtca-acttggggac---cgttgcag 131  Q
    |||||||| |||||| |||||||||||||||||||||   ||||||||| ||||| | |   |||||||||||||||| || | | |||   |||  ||     
T  13992770 aaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgacgtacgtatca- 13992672  T
Q  132 atcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    |||||||||||||||  |||||||||| ||||||||  |||| | | ||||||||||| |||||||||||||||  |||||||    
T  13992671 atcgtgacacgatct--ggaaatcgtgacacgattttatcagtggaagactagtattt-aagtgttcttgtgcagatttggag 13992592  T

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Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 8395299 - 8395375
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||| ||||||| | || |||||||||||| || |||||||||||| ||||| ||||  |||||||||||||||    
T  8395299 aaatcgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtc 8395375  T

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Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 5135757 - 5135834
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||| ||||    
T  5135757 aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtc 5135834  T

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Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 5137983 - 5138060
Alignment:
Q  36 aaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||| ||||    
T  5137983 aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtc 5138060  T

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Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 31495793 - 31495717
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  31495793 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 31495717  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 29761055 - 29761001
Alignment:
Q  151 aaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgca 205  Q
    ||||||||||||||||||||||| | | ||||||||| ||  |||||||||||||    
T  29761055 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgca 29761001  T

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Target: scaffold0464 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 858 - 567
Alignment:
Q  15 gagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaa 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  858 gagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 759  T
Q  115 cttggggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttggag 214  Q
    ||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||| ||  |||||||||||| ||||||       
T  758 ctttggttccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactggtatatattgtgttcttgtgcttttttg--- 662  T
Q  215 agaacctcaagacaaccttgagagaacttaagagaggaaaacttggagatcaaagaggggatcctttggggtgtgttactttgatgagagtgtttcgtag 314  Q
            ||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| |||    
T  661 --------aagacaaccttaagagagcttaagaga-gaaatcttggagatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttag 571  T

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Target: scaffold0355 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 3445 - 3619
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||| |||||| |||||||||||||||||||    
T  3445 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtcaacctggggaccgttgcagatcg 3544  T
Q  136 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcattttt 210  Q
    |||||||||||||| |||||||| |||||||||||||||| | ||||||||| ||  || ||||||||| |||||    
T  3545 tgacacgatctaggaaaatcgtgacacgatttcttcaggggaagactagtatatattgtattcttgtgctttttt 3619  T

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Target: scaffold0135 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 36 - 211
Target Start/End: Original strand, 34662 - 34837
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggggaccgttgcagatcg 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||| || | ||| |||||||||||||    
T  34662 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagatcg 34761  T
Q  136 tgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcatttttg 211  Q
    ||||||||||||||||||||||||||| |||||||||| | | ||||||||| ||  |||||||| ||| ||||||    
T  34762 tgacacgatctagggaaatcgtggcactatttcttcagaggaagactagtatatattgtgttcttttgcttttttg 34837  T

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Target: scaffold0665 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 8199 - 8091
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtcaacttggg 120  Q
    ||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| | ||    
T  8199 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 8100  T
Q  121 gaccgttgc 129  Q
    | |||||||    
T  8099 gtccgttgc 8091  T

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Target: scaffold0674 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 4202 - 4126
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| ||||  |||||||||||||||    
T  4202 aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 4126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 22033 - 22124
Alignment:
Q  21 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    ||||||| ||| || |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||| |||| ||||||||||| ||||    
T  22033 agtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtc 22124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 3077 - 3001
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| |||   |||||||||||||||    
T  3077 aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtc 3001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 17540 - 17616
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| ||||||||||||||||||||||| ||||   ||||||||| ||||| ||||  ||||||||| |||||    
T  17540 aaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtc 17616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 11644 - 11569
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||| |||||| |||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  11644 aaatcgtgacacgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 11569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 9184 - 9124
Alignment:
Q  52 ttgggaaatcgtgacacgattcagaaacttgctggttaactatctctgataaggactggtc 112  Q
    |||||||||||||||||||||   ||||||||| ||||| | ||  |||||||||||||||    
T  9184 ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 9124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 1192 - 1246
Alignment:
Q  36 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 90  Q
    ||||||||| ||||| ||| |||||||||||||||||   |||||||||||||||    
T  1192 aaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaa 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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