View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9901_high_17 (Length: 250)
Name: NF9901_high_17
Description: NF9901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9901_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 25423885 - 25423640
Alignment:
| Q |
1 |
cagggccttattaaactaggacaatcccgagatgataaattgagaagagtgacaccaaaactagatgaaggtgatattacttttgcgttgcaggtaattt |
100 |
Q |
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| T |
25423885 |
cagggccttattaaactaggacaatccagagatgataaattgagaagagtgacaccaaaactagatgaaggtgatattacttttgcgttgcaggtaattt |
25423786 |
T |
|
| Q |
101 |
ttcattcccttgagccactgtatcatttgatttttatactaccttagattattgtgcttgtattggtagttactcatgagttttgacgcctgaatgaatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
25423785 |
ttcattcccttgagccactgtatcatttgatttttatactaccttagattattgtgcttgtattggtagttactcataagttttgacgcctgaatgaatt |
25423686 |
T |
|
| Q |
201 |
tcattgcagggaatccgcttttttcgaaattgtcttctgtgctcct |
246 |
Q |
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||||||||||||||||||||||||||||||||||||| ||| |||| |
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| T |
25423685 |
tcattgcagggaatccgcttttttcgaaattgtcttcagtgatcct |
25423640 |
T |
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