View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9901_high_6 (Length: 420)
Name: NF9901_high_6
Description: NF9901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9901_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 306 - 402
Target Start/End: Original strand, 29585934 - 29586030
Alignment:
| Q |
306 |
atctttgaactaaatctgcatatcttcatgtacagcatgaatgaaaaaataaagcttgttaaagatagaagcaagaatgacagaaagtgggtgcatc |
402 |
Q |
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| T |
29585934 |
atctttgaactaaatctgcatatcttcatgtacagcatgaatgaaaaaataaagcttgttaaagatagaagcaagaatgacagaaagtgggtgcatc |
29586030 |
T |
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