View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9901_low_33 (Length: 213)
Name: NF9901_low_33
Description: NF9901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9901_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 301625 - 301803
Alignment:
| Q |
20 |
ataggggatggtgagtttttcataatcatatctgaaatagtctgcagtttatatgtgtactttgtttgggggactgagcagtgattgataaggatttgtc |
119 |
Q |
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| T |
301625 |
ataggggatggtgagtttttcataatcatatctgaaatagtctgcagtttatatgtgtactttgtttgggggactgagcagtgattgataaggatttgtc |
301724 |
T |
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| Q |
120 |
aataagttaggcttctttttcacttaatgtgtcacaggaacttttaatttttaaatatgttttcaaaatgagacctatg |
198 |
Q |
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| T |
301725 |
aataagttaggcttctttttcacttaatgtgtcacaggaacttttaatttttaaatatgttttcaaaattagacctatg |
301803 |
T |
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