View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9902_high_7 (Length: 365)
Name: NF9902_high_7
Description: NF9902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9902_high_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 340; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 18 - 365
Target Start/End: Original strand, 35572170 - 35572517
Alignment:
| Q |
18 |
gtatgtagcctgccaagtgattatgaaacaaaatttaggatctataataagaaataattaattaaacttggattgaagctagcgcatggacacaaattga |
117 |
Q |
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| T |
35572170 |
gtatgtagcctgccaagtgattatgaaacaaaatttaggatctataataagaaataattaattaaacttggattgaagctagcgcatggacacaaattga |
35572269 |
T |
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| Q |
118 |
tatactaattaaattttggtctctcgttggaattagaggagagccatatctacaacttgacttagctgtattcaaagttggaatttaaaattttaaaaat |
217 |
Q |
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| T |
35572270 |
tatactaattaaattttggtctctcgttggaattagaggagagccatatctacaacttgacttagctgtattcaaagttggaatttaaaattttaaaaat |
35572369 |
T |
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| Q |
218 |
tggaattgaaaacttagggggctcatcccatttacgactgattaaactaagcgtagttgttgacgtaaagtatatatccagttcactgatacattgaacc |
317 |
Q |
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| T |
35572370 |
tggaattgaaaacttagggagctcatcccatttacgactgattaaactaagtgtagttgttgacgtaaagtatatatccagttcactgatacattgaacc |
35572469 |
T |
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| Q |
318 |
attcataaaaacttgatgttttgagaccatttgcgatttaacatgatt |
365 |
Q |
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| T |
35572470 |
attcataaaaacttgatgttttgagaccatttgcgatttaacatgatt |
35572517 |
T |
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