View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9902_low_3 (Length: 490)

Name: NF9902_low_3
Description: NF9902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9902_low_3
NF9902_low_3
[»] chr4 (36 HSPs)
chr4 (172-451)||(42081949-42082229)
chr4 (10-178)||(42081756-42081925)
chr4 (18-100)||(29406386-29406469)
chr4 (18-92)||(43627227-43627302)
chr4 (18-111)||(51890826-51890921)
chr4 (10-100)||(38848078-38848170)
chr4 (18-92)||(2629608-2629683)
chr4 (18-100)||(32293137-32293220)
chr4 (10-100)||(40486462-40486553)
chr4 (18-100)||(42664010-42664093)
chr4 (18-99)||(42002335-42002417)
chr4 (15-100)||(43978034-43978120)
chr4 (12-100)||(47890718-47890808)
chr4 (18-109)||(23924820-23924913)
chr4 (55-100)||(31852416-31852461)
chr4 (12-100)||(44568177-44568266)
chr4 (55-100)||(49264593-49264638)
chr4 (19-109)||(12625859-12625951)
chr4 (55-99)||(55055983-55056027)
chr4 (15-100)||(12775196-12775283)
chr4 (18-88)||(13088938-13089009)
chr4 (56-99)||(45867719-45867762)
chr4 (45-100)||(52015547-52015602)
chr4 (55-100)||(626939-626985)
chr4 (55-100)||(1457975-1458021)
chr4 (18-87)||(6170940-6171010)
chr4 (55-100)||(25726266-25726312)
chr4 (16-100)||(34040455-34040541)
chr4 (55-100)||(47934029-47934075)
chr4 (55-100)||(48569133-48569179)
chr4 (55-100)||(53572284-53572330)
chr4 (56-100)||(33107424-33107469)
chr4 (55-100)||(43905777-43905822)
chr4 (55-100)||(44040426-44040471)
chr4 (18-86)||(47678566-47678634)
chr4 (56-100)||(50279005-50279049)
[»] chr7 (33 HSPs)
chr7 (18-109)||(41331027-41331120)
chr7 (18-100)||(7664147-7664230)
chr7 (15-100)||(38151370-38151456)
chr7 (18-96)||(40518851-40518930)
chr7 (18-111)||(45284765-45284860)
chr7 (18-92)||(6252107-6252183)
chr7 (18-100)||(47542935-47543017)
chr7 (58-100)||(27424909-27424951)
chr7 (18-109)||(22548240-22548333)
chr7 (18-87)||(44831593-44831662)
chr7 (55-99)||(7778955-7778999)
chr7 (56-100)||(7836894-7836938)
chr7 (14-101)||(25155566-25155654)
chr7 (21-92)||(4886871-4886942)
chr7 (15-89)||(9497704-9497779)
chr7 (61-100)||(12935813-12935852)
chr7 (60-99)||(27159750-27159789)
chr7 (18-92)||(32750045-32750120)
chr7 (55-100)||(3766878-3766924)
chr7 (55-100)||(15238956-15239002)
chr7 (55-100)||(19331457-19331503)
chr7 (55-100)||(31727749-31727795)
chr7 (55-100)||(38889450-38889496)
chr7 (55-100)||(44616669-44616715)
chr7 (55-100)||(48119537-48119583)
chr7 (55-100)||(48719866-48719912)
chr7 (10-90)||(10363387-10363468)
chr7 (56-100)||(13720838-13720883)
chr7 (55-92)||(13730063-13730100)
chr7 (15-98)||(14204298-14204383)
chr7 (55-92)||(47438001-47438038)
chr7 (55-100)||(49089567-49089612)
chr7 (15-86)||(41465860-41465932)
[»] chr8 (35 HSPs)
chr8 (18-99)||(550330-550412)
chr8 (55-100)||(15856464-15856509)
chr8 (12-96)||(30676266-30676351)
chr8 (15-100)||(8265294-8265381)
chr8 (15-100)||(43656062-43656149)
chr8 (18-100)||(43846964-43847047)
chr8 (55-100)||(25812167-25812212)
chr8 (18-97)||(12770397-12770477)
chr8 (55-98)||(3187377-3187420)
chr8 (15-92)||(31152984-31153063)
chr8 (55-100)||(94468-94514)
chr8 (55-100)||(2792846-2792892)
chr8 (55-100)||(11875953-11875999)
chr8 (55-100)||(11890960-11891006)
chr8 (55-100)||(13647414-13647460)
chr8 (55-100)||(13747839-13747885)
chr8 (55-100)||(14876559-14876605)
chr8 (55-100)||(16432085-16432131)
chr8 (55-100)||(16449192-16449238)
chr8 (58-100)||(24458387-24458429)
chr8 (55-100)||(28420381-28420427)
chr8 (55-100)||(34413129-34413175)
chr8 (12-100)||(39587570-39587660)
chr8 (55-100)||(43856339-43856385)
chr8 (15-92)||(3226966-3227043)
chr8 (55-100)||(3949039-3949084)
chr8 (29-100)||(9070682-9070755)
chr8 (62-99)||(20894658-20894695)
chr8 (55-100)||(22274569-22274614)
chr8 (55-100)||(38283191-38283236)
chr8 (18-90)||(41272123-41272196)
chr8 (55-92)||(44088922-44088959)
chr8 (55-98)||(4654068-4654112)
chr8 (55-95)||(7055324-7055364)
chr8 (48-103)||(22804136-22804192)
[»] chr3 (28 HSPs)
chr3 (15-92)||(52992025-52992103)
chr3 (55-109)||(44764787-44764842)
chr3 (18-96)||(26880206-26880285)
chr3 (18-108)||(24303419-24303511)
chr3 (18-92)||(4227710-4227785)
chr3 (18-111)||(18764814-18764908)
chr3 (18-100)||(29531243-29531326)
chr3 (15-100)||(52945921-52946007)
chr3 (12-100)||(5173968-5174057)
chr3 (55-100)||(25716010-25716055)
chr3 (16-99)||(49194650-49194735)
chr3 (18-100)||(9685025-9685108)
chr3 (15-100)||(17729017-17729104)
chr3 (15-100)||(19030246-19030333)
chr3 (55-100)||(6488191-6488237)
chr3 (55-100)||(10349467-10349513)
chr3 (55-100)||(17218555-17218601)
chr3 (55-100)||(22501888-22501934)
chr3 (55-100)||(33606897-33606943)
chr3 (55-100)||(44764527-44764573)
chr3 (62-99)||(15006016-15006053)
chr3 (56-100)||(15975365-15975410)
chr3 (18-90)||(19222554-19222627)
chr3 (56-100)||(38819281-38819326)
chr3 (55-92)||(40192223-40192260)
chr3 (55-100)||(49443381-49443426)
chr3 (55-92)||(49577436-49577473)
chr3 (55-92)||(54769796-54769833)
[»] chr2 (24 HSPs)
chr2 (15-100)||(40363029-40363115)
chr2 (12-100)||(1027591-1027680)
chr2 (10-99)||(3596271-3596361)
chr2 (12-87)||(13242702-13242778)
chr2 (16-100)||(2289637-2289723)
chr2 (58-100)||(3287014-3287056)
chr2 (15-100)||(43214382-43214466)
chr2 (15-100)||(44666301-44666387)
chr2 (56-101)||(27497485-27497530)
chr2 (55-92)||(29942092-29942129)
chr2 (18-100)||(4858662-4858742)
chr2 (56-99)||(40403618-40403661)
chr2 (55-100)||(5613021-5613067)
chr2 (55-100)||(13773467-13773513)
chr2 (55-100)||(27913427-27913473)
chr2 (55-100)||(36182709-36182755)
chr2 (55-100)||(41566829-41566875)
chr2 (18-98)||(3154026-3154107)
chr2 (55-99)||(17601146-17601191)
chr2 (55-100)||(20919677-20919722)
chr2 (55-99)||(21438901-21438946)
chr2 (55-99)||(34355788-34355833)
chr2 (56-92)||(15146352-15146388)
chr2 (60-100)||(41185418-41185458)
[»] chr5 (29 HSPs)
chr5 (12-100)||(41083496-41083584)
chr5 (12-100)||(35241419-35241508)
chr5 (18-99)||(11313507-11313589)
chr5 (19-100)||(8571823-8571905)
chr5 (15-92)||(20145530-20145608)
chr5 (16-100)||(36124426-36124512)
chr5 (15-100)||(36735897-36735985)
chr5 (55-99)||(1382199-1382243)
chr5 (55-99)||(4068049-4068093)
chr5 (15-99)||(33735975-33736058)
chr5 (18-99)||(7545356-7545439)
chr5 (55-100)||(11146486-11146532)
chr5 (55-100)||(13958449-13958495)
chr5 (55-100)||(17545129-17545175)
chr5 (55-100)||(29045936-29045982)
chr5 (55-100)||(5908276-5908321)
chr5 (20-100)||(6734696-6734777)
chr5 (55-100)||(17064816-17064861)
chr5 (55-100)||(24477892-24477937)
chr5 (55-96)||(28906873-28906914)
chr5 (55-96)||(28943268-28943309)
chr5 (55-100)||(30800959-30801004)
chr5 (55-100)||(38696757-38696802)
chr5 (55-99)||(41179761-41179806)
chr5 (56-100)||(12474050-12474093)
chr5 (55-99)||(14804941-14804985)
chr5 (56-96)||(23427058-23427098)
chr5 (14-92)||(30783679-30783759)
chr5 (56-100)||(35796032-35796076)
[»] chr1 (43 HSPs)
chr1 (15-86)||(24910450-24910522)
chr1 (18-100)||(23991222-23991305)
chr1 (18-111)||(31124584-31124679)
chr1 (18-108)||(37280731-37280822)
chr1 (18-100)||(45416136-45416219)
chr1 (9-100)||(34557281-34557374)
chr1 (55-100)||(47469031-47469076)
chr1 (61-100)||(39670787-39670826)
chr1 (15-92)||(11081182-11081260)
chr1 (55-100)||(48897074-48897120)
chr1 (55-100)||(7491828-7491873)
chr1 (55-100)||(10842015-10842060)
chr1 (55-100)||(17058771-17058816)
chr1 (63-111)||(26824266-26824315)
chr1 (15-100)||(32119421-32119505)
chr1 (63-100)||(41927051-41927088)
chr1 (56-99)||(35283569-35283613)
chr1 (15-100)||(1604181-1604268)
chr1 (61-111)||(2514555-2514606)
chr1 (15-97)||(3694876-3694959)
chr1 (15-100)||(8865880-8865967)
chr1 (15-96)||(44019302-44019385)
chr1 (55-98)||(50119039-50119082)
chr1 (55-100)||(7166184-7166230)
chr1 (55-100)||(11215068-11215114)
chr1 (18-87)||(11860071-11860141)
chr1 (55-100)||(18467155-18467201)
chr1 (12-100)||(18534024-18534114)
chr1 (55-100)||(22563453-22563499)
chr1 (15-100)||(24874997-24875083)
chr1 (55-93)||(34562752-34562790)
chr1 (55-100)||(45333669-45333715)
chr1 (55-100)||(45517225-45517271)
chr1 (55-92)||(11333731-11333768)
chr1 (55-92)||(11491752-11491789)
chr1 (56-100)||(16526134-16526179)
chr1 (55-96)||(16661320-16661361)
chr1 (18-90)||(25036230-25036303)
chr1 (18-90)||(25041442-25041515)
chr1 (15-99)||(27178667-27178752)
chr1 (63-100)||(41620454-41620491)
chr1 (20-100)||(43021580-43021661)
chr1 (57-100)||(32589446-32589490)
[»] chr6 (20 HSPs)
chr6 (15-96)||(8439701-8439784)
chr6 (13-99)||(10913037-10913125)
chr6 (15-100)||(19892233-19892320)
chr6 (18-92)||(24319042-24319117)
chr6 (55-97)||(1435876-1435918)
chr6 (55-100)||(3640581-3640627)
chr6 (55-100)||(3795731-3795777)
chr6 (12-100)||(20728974-20729064)
chr6 (55-100)||(26347471-26347517)
chr6 (55-100)||(28222929-28222975)
chr6 (55-100)||(32166436-32166482)
chr6 (61-98)||(3298927-3298964)
chr6 (55-99)||(6210121-6210166)
chr6 (12-99)||(14708978-14709067)
chr6 (56-100)||(22574938-22574983)
chr6 (55-100)||(29646506-29646551)
chr6 (62-99)||(30504554-30504591)
chr6 (55-98)||(7418345-7418389)
chr6 (18-89)||(9689272-9689344)
chr6 (56-100)||(19374798-19374842)
[»] scaffold0246 (1 HSPs)
scaffold0246 (10-100)||(24401-24492)
[»] scaffold0031 (1 HSPs)
scaffold0031 (15-100)||(49958-50045)
[»] scaffold0025 (1 HSPs)
scaffold0025 (15-100)||(65744-65831)
[»] scaffold0445 (1 HSPs)
scaffold0445 (55-100)||(3971-4017)
[»] scaffold0179 (1 HSPs)
scaffold0179 (55-100)||(6044-6090)
[»] scaffold0038 (1 HSPs)
scaffold0038 (55-100)||(23427-23473)


Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 172 - 451
Target Start/End: Original strand, 42081949 - 42082229
Alignment:
Q  172 atcgcaatggtggaaatgtttaagattgatttgctttgaatatatcttttcgaatttaaacttacctgaagatcaatttatcttttcgattttcaatttg 271  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  42081949 atcgcaatggtggaactgtttaagattgatttgcttttaatatatcttttcgaatttaaacttacatgaagaacaatttatcttttcgattttcaatttg 42082048  T
Q  272 gaagttacgatcgttactgttactttgttgagcgattcgtagcagatcatatgttatgtgttgttacacattataacggataatgatgga-tagtgcgag 370  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  42082049 gaagtcacgatcgttactgttactttgttgagcgattcgtaacagatcatatgttatgcgttgttacacattataacggataatgatggattagtgcgag 42082148  T
Q  371 acttagagcgacgaaattcgagaaaagtagtttttgcttgcaatccgaaagacacacgagaaatcaatatagagtggaagg 451  Q
     |||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  42082149 gcttagagcgacgaaattcaagaaaagtagttttttcttgcaatccgaaagacgcacgagaaatcaatatagagtggaagg 42082229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 42081756 - 42081925
Alignment:
Q  10 gcagagatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactagctattaga 108  Q
    |||||||||||||||||||||||||||||   || ||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  42081756 gcagagatattgcataatttatgtaggggctggggttcgaatcttggacactccacttctccacatttaattgtgtgagctctacccactagctattaga 42081855  T
Q  109 ccatnnnnnnnntgtcagttaatttgaaagagcgtgatggnnnnnnncttacgtgaagaatatatcgcaa 178  Q
    ||||        ||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  42081856 ccataaaaaaaatgtcagttaatttgaaagagcgtgatggaaaaaaacttacgtgaagaatatatcgcaa 42081925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 29406386 - 29406469
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||| ||||||| || |||||| ||  ||||  ||||||||||| |||||||||||||||||| |||||||||    
T  29406386 attgcataatttatgcaggggtcggggttcgaactccggacaacccacttctccacatttaattgtgtgagctccaaccactag 29406469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 43627302 - 43627227
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||||||||||||| ||||||| || ||| || | || |||||||||||||||| ||||||||||||||||||||    
T  43627302 attgcataatttatgcaggggtcggggttcaaaccctggacactccacttctccatatttaattgtgtgagctcta 43627227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 51890826 - 51890921
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccacta-gctattagacca 111  Q
    ||||||||||||||| ||||| | || |||||| |  | |||| ||||||||||| |||||||||||||||||||| |||||| ||||||||||||    
T  51890826 attgcataatttatgcaggggccggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctctagccactaggctattagacca 51890921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 38848170 - 38848078
Alignment:
Q  10 gcagagatattgcataa-tttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||| |||||||||||| |||||| ||||||| || |||||| |  | |||| ||||||||||| |||||| |||||||||||||||||||||    
T  38848170 gcagggatattgcataaatttatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaatgtgtgagctctaaccactag 38848078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 2629608 - 2629683
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttga-cactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||||||||||||| ||||||| || |||||| |  || ||| ||||||||||| ||||||||||||||||||||    
T  2629608 attgcataatttatgcaggggtcggggttcgaaccccgaacaccccacttctccacatttaattgtgtgagctcta 2629683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 32293137 - 32293220
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||| ||||||| || || ||| | || ||| |||||||||||| |||||||| ||||||||||| |||||||    
T  32293137 attgcataatttatgcaggggtcggggttagaaccctggacattccacttctccacatttaattatgtgagctctagccactag 32293220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 40486462 - 40486553
Alignment:
Q  10 gcagagatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||| |||||||||||||||||| ||||| | || |||||| |  | ||||||||||||| || |||||| ||||||||||||| |||||||    
T  40486462 gcagggatattgcataatttatgcaggggccggggttcgaaccccggacactccacttcttcacatttaaatgtgtgagctctagccactag 40486553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 42664010 - 42664093
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||| | || |||  || |||||||| || |||| ||||||||||| |||||||||||||||||||| |||||||    
T  42664010 attgcataatttacgcagaggttggggttcgaatcctggacaccccacttctccacatttaattgtgtgagctctagccactag 42664093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 42002335 - 42002417
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatctt-gacactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||||||||||||||||||| |  | || ||| ||  ||||| ||||||||||| |||||||||||||||||||| ||||||    
T  42002335 attgcataatttatgtaggggccgtggtttgaacctcagacaccccacttctccacatttaattgtgtgagctctagccacta 42002417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 43978034 - 43978120
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||| ||||||| || |||||| |   |||||||||||||||| | ||||||||| |||||||||||||||||    
T  43978034 gatattgcatattatatgcaggggtcggggttcgaacccgtacactccacttctccacaatttaattgtatgagctctaaccactag 43978120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 47890718 - 47890808
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaatctt-gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    |||||||||||||| | |||| ||||||| || |||||| |   ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  47890718 agagatattgcatattatatgcaggggtcggggttcgaaccccagacactccacttctccacaattaaattgtgtgagctctaaccactag 47890808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 23924913 - 23924820
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccacta-gctattagac 109  Q
    ||||||||||||||| ||||| | || |||||| |  | ||||| |||||||||| ||||| |||||||||||||| |||||| ||||||||||    
T  23924913 attgcataatttatgcaggggccggggttcgaaccccggacacttcacttctccacatttatttgtgtgagctctagccactaggctattagac 23924820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 31852416 - 31852461
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||    
T  31852416 gacaccccacttctccatatttaattgtgtgagctctagccactag 31852461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 44568266 - 44568177
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||| | |||| ||||||| || |||||| ||  |||||  |||||||||| |||||||||||||||||| | |||||||    
T  44568266 agagatattgcatattatatgcaggggtcggggttcgaactcgagacacctcacttctccatatttaattgtgtgagctcaagccactag 44568177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 49264593 - 49264638
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||    
T  49264593 gacaccccacttctccacatttaattgtgtgagctctagccactag 49264638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 12625859 - 12625951
Alignment:
Q  19 ttgcataatttatgtaggggtcaggattcgaat-cttgacactccacttctccagatttaattgtgtgagctctaaccacta-gctattagac 109  Q
    |||||||||||||| ||||||| |  ||||||  |  ||||| ||||||||||| |||||||||||||| ||||| |||||| ||||||||||    
T  12625859 ttgcataatttatgcaggggtcggagttcgaacaccggacaccccacttctccacatttaattgtgtgaactctagccactaggctattagac 12625951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 55055983 - 55056027
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||    
T  55055983 gacacgccacttctccacatttaattgtgtgagctccaaccacta 55056027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 12775283 - 12775196
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaat-cttgacactccacttctcca-gatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||  | |||| |||||||||| ||||||| || |||||||||||||||||  ||| ||||||||||||| || |||||||    
T  12775283 gatattgcattttatatgcaggggtcagggttcgaattctggacactccacttctccacaattaaattgtgtgagctttacccactag 12775196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 13088938 - 13089009
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatct-tgacactccacttctccagatttaattgtgtgagc 88  Q
    ||||||||||||||| ||||||| || |||||||||  ||||| |||||| |||| ||| ||||||||||||    
T  13088938 attgcataatttatgcaggggtcggggttcgaatctcggacaccccacttttccacattaaattgtgtgagc 13089009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 45867719 - 45867762
Alignment:
Q  56 acactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||||||||||||||  |||||||||| |||||||||||||||    
T  45867719 acactccacttctccacgtttaattgtgcgagctctaaccacta 45867762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 52015547 - 52015602
Alignment:
Q  45 ttcgaatcttgacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||  ||||||||||| |||||  |||||||||| ||||||||||||||||    
T  52015547 ttcgaatccggacactccactcctccacgtttaattgtgcgagctctaaccactag 52015602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 626985 - 626939
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  626985 gacactccacttctccacaattaaattgtgtgagctctaaccactag 626939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 1458021 - 1457975
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  1458021 gacactccacttctccacaattaaattgtgtgagctctaaccactag 1457975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 6171010 - 6170940
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatctt-gacactccacttctccagatttaattgtgtgag 87  Q
    |||||||||||||||||||||   || |||||| ||  ||||||| ||||||||| |||||||||||||||    
T  6171010 attgcataatttatgtaggggctggggttcgaacctcagacactctacttctccacatttaattgtgtgag 6170940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 25726312 - 25726266
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||    
T  25726312 gacactccacttctccacaatttaattgtgcgagctctaaccactag 25726266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 34040455 - 34040541
Alignment:
Q  16 atattgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccagattta-attgtgtgagctctaaccactag 100  Q
    |||||||||  | ||||||||||||||| |||||| ||  ||||||||||||||||| | ||| |||||||||| |||| |||||||    
T  34040455 atattgcattttatatgtaggggtcagggttcgaactccggacactccacttctccataattatattgtgtgagttctagccactag 34040541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 47934075 - 47934029
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  47934075 gacactccacttctccacaatttaattgtgtgagctctagccactag 47934029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 48569179 - 48569133
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  48569179 gacactccacttctccacaatttaattgtgtgagctctagccactag 48569133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 53572330 - 53572284
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||||    
T  53572330 gacactccacttctccacaatttaattgtgtgagcgctaaccactag 53572284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 33107424 - 33107469
Alignment:
Q  56 acactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||    
T  33107424 acactccacttctccacaatttaattgtgcgagctctaaccactag 33107469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 43905777 - 43905822
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| |||||||||||  ||||||||||||||||||| |||||||    
T  43905777 gacaccccacttctccacgtttaattgtgtgagctctagccactag 43905822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 44040426 - 44040471
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| || ||||||||||||||||| |||||||    
T  44040426 gacaccccacttctccatatataattgtgtgagctctatccactag 44040471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 47678634 - 47678566
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccagatttaattgtgtga 86  Q
    |||||||||||||| |||||||| | ||||||| |   |||| ||| ||||||| ||||||||||||||    
T  47678634 attgcataatttatataggggtcggaattcgaacccgaacaccccaattctccatatttaattgtgtga 47678566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 50279049 - 50279005
Alignment:
Q  56 acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||||| ||||||| |||||||||| | |||||||    
T  50279049 acactccacttctccacatttaatagtgtgagctccagccactag 50279005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 41331120 - 41331027
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaat-cttgacactccacttctccagatttaattgtgtgagctctaaccacta-gctattagac 109  Q
    ||||||||||||||| ||||||| || ||||||| |  ||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  41331120 attgcataatttatgcaggggtcggggttcgaattccggacaccccacttctccacatttaattgtgtgagctttaaccactaggctattagac 41331027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 7664230 - 7664147
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatctt-gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||| ||||||| || |||||||||  ||||||| ||||||||| |||||||||||| ||||||||| |||||    
T  7664230 attgcataatttatgcaggggtcgggtttcgaatctcagacactctacttctccaaatttaattgtgtaagctctaactactag 7664147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 38151370 - 38151456
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttga-cactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||||||| ||||||| ||||||| || |||||| | ||| ||| ||||||||||| |||||||||||||||||||| |||||||    
T  38151370 gatattgcattatttatgcaggggtcggggttcgaaccatgaacaccccacttctccacatttaattgtgtgagctctagccactag 38151456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 40518930 - 40518851
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccagatttaattgtgtgagctctaacca 96  Q
    |||||||||| |||||||||||  ||||||||| ||  ||||| ||||||||||| |||||||||||||||||| |||||    
T  40518930 attgcataatatatgtaggggttgggattcgaactccggacaccccacttctccacatttaattgtgtgagctccaacca 40518851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 45284860 - 45284765
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag-ctattagacca 111  Q
    |||| |||||||||| ||||||| || |||||| |  | |||| ||||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  45284860 attgaataatttatgcaggggtcggggttcgaaccccggacaccccacttctcaacatttaattgtgtgagctctaaccactagactattagacca 45284765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 6252107 - 6252183
Alignment:
Q  18 attgcataatttatgtaggggtc-aggattcgaatctt-gacactccacttctccagatttaattgtgtgagctcta 92  Q
    |||| |||||||||||||||||  ||| |||||| ||| ||||||||||||||||| |||||| |||||||||||||    
T  6252107 attgtataatttatgtaggggttgaggtttcgaaccttagacactccacttctccacatttaaatgtgtgagctcta 6252183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 47543017 - 47542935
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||| ||||| |||| ||||||||  | |||| ||||||||||| |||||||| ||||||||||| |||||||    
T  47543017 attgcataatttatgcaggggccagggttcgaatcccggacac-ccacttctccatatttaattttgtgagctctagccactag 47542935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 27424909 - 27424951
Alignment:
Q  58 actccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
T  27424909 actccacttctccacatttaattgtgtgagctctagccactag 27424951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 22548240 - 22548333
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttga-cactccacttctccagatttaattgtgtgagctctaaccact-agctattagac 109  Q
    ||||||||||||||  |||||||||| |||||| |  || ||| ||||||||||| ||||||||| |||||||| | ||||| |||||||||||    
T  22548240 attgcataatttatacaggggtcagggttcgaaccccgaacaccccacttctccacatttaattgcgtgagctccagccactaagctattagac 22548333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 44831662 - 44831593
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccagatttaattgtgtgag 87  Q
    ||||||||||||||| |||||||||  ||||||  | ||||| ||||||||||| |||||||| ||||||    
T  44831662 attgcataatttatgcaggggtcagagttcgaacatagacaccccacttctccacatttaattatgtgag 44831593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 7778999 - 7778955
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||||    
T  7778999 gacactccacttctccacatttaattgtgtgagttctagccacta 7778955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 7836938 - 7836894
Alignment:
Q  56 acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||| ||||||||||| |||||||||||||||||||| |||||||    
T  7836938 acacaccacttctccacatttaattgtgtgagctctagccactag 7836894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 25155566 - 25155654
Alignment:
Q  14 agatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactagc 101  Q
    ||||| |||||| |||||| |||| || || |||||| | || |||| ||||||||||| ||||||||||||||||| || ||||||||    
T  25155566 agataatgcatattttatgcagggttcggggttcgaaccctggacaccccacttctccacatttaattgtgtgagctgtagccactagc 25155654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 4886871 - 4886942
Alignment:
Q  21 gcataatttatgtaggggtcaggattcgaatcttgacactccacttctccagatttaattgtgtgagctcta 92  Q
    |||||||||||| | ||||| || ||||||||  ||||| ||||||||||| || ||||||||||| |||||    
T  4886871 gcataatttatgcaagggtcggggttcgaatccggacaccccacttctccacatataattgtgtgaactcta 4886942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 9497704 - 9497779
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatctt-gacactccacttctccagatttaattgtgtgagct 89  Q
    ||||||||||||||||| |||||||  || ||||||| |  ||||||| | ||||||| |||||||||||||||||    
T  9497704 gatattgcataatttatataggggttggggttcgaatttcagacactctatttctccatatttaattgtgtgagct 9497779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 12935813 - 12935852
Alignment:
Q  61 ccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  12935813 ccacttctccacatttaattgtgtgagctctagccactag 12935852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 99
Target Start/End: Original strand, 27159750 - 27159789
Alignment:
Q  60 tccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  27159750 tccacttctccacatttaattgtgtgagctctagccacta 27159789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 32750045 - 32750120
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatctt-gacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||||||||||||| | |||   || |||||||||  ||||||||||||||||| | ||||||||||||||||||    
T  32750045 attgcataatttatgcacgggcaggggttcgaatctcagacactccacttctccataattaattgtgtgagctcta 32750120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 3766878 - 3766924
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  3766878 gacactccacttctccacaattaaattgtgtgagctctaaccactag 3766924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 15238956 - 15239002
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  15238956 gacactccacttctccataatttaattgtgtgagctctagccactag 15239002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 19331503 - 19331457
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  19331503 gacactccacttctccacaatttaattgtgtgagctctagccactag 19331457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 31727795 - 31727749
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||||    
T  31727795 gacactccacttctccacaatttaattgtgtgagctcaaaccactag 31727749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 38889496 - 38889450
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  38889496 gacactccacttctccacaatttaattgtgtgagctctatccactag 38889450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 44616669 - 44616715
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  44616669 gacactccacttctccacaattaaattgtgtgagctctaaccactag 44616715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 48119537 - 48119583
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  48119537 gacactccacttctccacaatttaattgtgtgagctctagccactag 48119583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 48719866 - 48719912
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  48719866 gacactccacttctccacaatttaattgtgtgagctctagccactag 48719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 10363468 - 10363387
Alignment:
Q  10 gcagagatattgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccagatttaattgtgtgagctc 90  Q
    |||||||||||| |||||||||| ||||||| |  |||||| |||  ||||  |||||||||| |||||| |||||||||||    
T  10363468 gcagagatattgtataatttatgcaggggtcggagttcgaagtctgaacacctcacttctccacatttaaatgtgtgagctc 10363387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 13720838 - 13720883
Alignment:
Q  56 acactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||    
T  13720838 acactccacttctccaaaatttaattgtgtgagctctagccactag 13720883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 13730100 - 13730063
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  13730100 gacactccatttctccatatttaattgtgtgagctcta 13730063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 14204298 - 14204383
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccaga-tttaattgtgtgagctctaaccact 98  Q
    ||||||||||| | ||||||||||   || |||||| || | |||||||||||||||| | |||||||||||| ||||||||||||    
T  14204298 gatattgcatattatatgtaggggctggggttcgaacctcggacactccacttctccacaatttaattgtgtgggctctaaccact 14204383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 47438001 - 47438038
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  47438001 gacactccacttctccacatttaactgtgtgagctcta 47438038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 49089567 - 49089612
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| || ||||||||||||||||| |||||||    
T  49089567 gacaccccacttctccacatataattgtgtgagctctagccactag 49089612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 41465860 - 41465932
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccagatttaattgtgtga 86  Q
    ||||||||||| | |||| |||||||||| |||||| ||  ||||| ||||||||||| ||||||| ||||||    
T  41465860 gatattgcatattatatgcaggggtcagggttcgaactccggacaccccacttctccacatttaatggtgtga 41465932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 550330 - 550412
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttga-cactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||||||||||||| ||||||| || ||||||||| || |||||||||||| || |||||| ||||||||||| ||||||||    
T  550330 attgcataatttatgcaggggtcggggttcgaatctcgaacactccacttcttcacatttaaatgtgtgagctccaaccacta 550412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 15856509 - 15856464
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  15856509 gacaccccacttctccacatttaattgtgtgagctctaaccactag 15856464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 30676351 - 30676266
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaatcttga-cactccacttctccagatttaattgtgtgagctctaacca 96  Q
    ||||| |||| ||||||||||||| ||||||| ||||||||   | ||| ||| ||||||| ||||||||||||||||||||||||    
T  30676351 agagacattgtataatttatgtagaggtcagggttcgaatcccaaacaccccatttctccacatttaattgtgtgagctctaacca 30676266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 8265294 - 8265381
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||| |||||||||| |||||| |  | |||||||||||||||| | ||||||||||||||||||| |||||||    
T  8265294 gatattgcatattatatgcaggggtcagggttcgaaccccggacactccacttctccacaatttaattgtgtgagctctagccactag 8265381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 43656062 - 43656149
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||||||||||| || |||||| || | ||| |||||||||||| | ||||||||||||||||||| |||||||    
T  43656062 gatattgcatattatatgtaggggtcggggttcgaacctcggacattccacttctccacaatttaattgtgtgagctctagccactag 43656149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 43846964 - 43847047
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||| |||||||    |||||| | || |||| ||||||||||| |||||||||||||||||||| |||||||    
T  43846964 attgcataatttatgcaggggtcgatgttcgaaccctggacaccccacttctccacatttaattgtgtgagctctagccactag 43847047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 25812212 - 25812167
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||    
T  25812212 gacaccccacttctcaacatttaattgtgtgagctctaaccactag 25812167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 12770397 - 12770477
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccac 97  Q
    ||||||||||||||| ||||| | || |||||| |  | |||| ||||||||||| |||||||||||||||||||| ||||    
T  12770397 attgcataatttatgcaggggccggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctctagccac 12770477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 3187420 - 3187377
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccact 98  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||    
T  3187420 gacactccactcctccacatttaattgtgtgagctctatccact 3187377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 31153063 - 31152984
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctcca-gatttaattgtgtgagctcta 92  Q
    ||||||||||| | ||||||||||||||| ||||||  || ||||| |||||||||||  ||| ||||||||||||||||    
T  31153063 gatattgcatattatatgtaggggtcagggttcgaaccctggacaccccacttctccacaattaaattgtgtgagctcta 31152984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 94514 - 94468
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  94514 gacactccacttctccacaattaaattgtgtgagctctaaccactag 94468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 2792846 - 2792892
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||||    
T  2792846 gacactccacttctccacaatttaattgtgtgagctccaaccactag 2792892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 11875953 - 11875999
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  11875953 gacactccacttctccacaattaaattgtgtgagctctaaccactag 11875999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 11890960 - 11891006
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  11890960 gacactccacttctccacaattaaattgtgtgagctctaaccactag 11891006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 13647460 - 13647414
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  13647460 gacactccacttctccacaatttaattgtgtgagctctagccactag 13647414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 13747885 - 13747839
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  13747885 gacactccacttctccacaatttaattgtgtgagctctagccactag 13747839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 14876605 - 14876559
Alignment:
Q  55 gacactccacttctccagatt-taattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | | |||||||||||||||||||||||||    
T  14876605 gacactccacttctccacaatataattgtgtgagctctaaccactag 14876559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 16432131 - 16432085
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16432131 gacactccacttctccataatttaattgtgtgagctctagccactag 16432085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 16449192 - 16449238
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16449192 gacactccacttctccacaatttaattgtgtgagctctagccactag 16449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 24458387 - 24458429
Alignment:
Q  58 actccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||| ||||||||| |||||||||||||||||||| |||||||    
T  24458387 actcaacttctccacatttaattgtgtgagctctagccactag 24458429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 28420427 - 28420381
Alignment:
Q  55 gacactccacttctcca-gatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||||    
T  28420427 gacactccacttctccacgattaaattgtgtgagctctagccactag 28420381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 34413129 - 34413175
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  34413129 gacactccacttctccacaattaaattgtgtgagctctaaccactag 34413175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 39587570 - 39587660
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    |||||||||||||  | |||  ||||||| ||||||||| | || |||||||||||||||| | |||| |||||||||||||| |||||||    
T  39587570 agagatattgcattttatattcaggggtcgggattcgaaccctggacactccacttctccacaattaaattgtgtgagctctagccactag 39587660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 43856385 - 43856339
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||    
T  43856385 gacactccacttctccacaatttaattgtgagagctctaaccactag 43856339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 3227043 - 3226966
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||||||||| | |||| |||||| ||| |||||| |   |||||| | ||||||| ||||||||||||||||||||    
T  3227043 gatattgcatattatatgcaggggttagggttcgaaccacaacactctatttctccacatttaattgtgtgagctcta 3226966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 3949084 - 3949039
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| | |||||||||||||||||| |||||||    
T  3949084 gacaccccacttctccacaattaattgtgtgagctctagccactag 3949039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 9070755 - 9070682
Alignment:
Q  29 tatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||| |||||| || | ||||||||||| |||| | |||| |||| |||||||||||||||||    
T  9070755 tatgtaggggtcagggttcgaacctcggacactccacttttccacaattaaattgtatgagctctaaccactag 9070682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 20894695 - 20894658
Alignment:
Q  62 cacttctccagatttaattgtgtgagctctaaccacta 99  Q
    |||||||||| | |||||||||||||||||||||||||    
T  20894695 cacttctccacaattaattgtgtgagctctaaccacta 20894658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 22274614 - 22274569
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| | |||||||||||||||||| |||||||    
T  22274614 gacaccccacttctccacaattaattgtgtgagctctagccactag 22274569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 38283191 - 38283236
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| |||||||||||||| ||||| |||||||    
T  38283191 gacaccccacttctccacatttaattgtgtgaactctagccactag 38283236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 41272123 - 41272196
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccagatttaattgtgtgagctc 90  Q
    ||||||||||||||| |||||   || |||||| ||| ||||| ||||||||||| |||||| |||||||||||    
T  41272123 attgcataatttatgcaggggctggggttcgaactctggacacaccacttctccacatttaaatgtgtgagctc 41272196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 44088959 - 44088922
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  44088959 gacaccccacttctccatatttaattgtgtgagctcta 44088922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 4654112 - 4654068
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccact 98  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||    
T  4654112 gacactccacttctccacaatttaattgtgtgagctctagccact 4654068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 7055364 - 7055324
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaacc 95  Q
    ||||||| ||||||||| |||||||| ||||||||||||||    
T  7055364 gacactctacttctccatatttaattatgtgagctctaacc 7055324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 22804136 - 22804192
Alignment:
Q  48 gaatcttgacactccacttctccaga-tttaattgtgtgagctctaaccactagcta 103  Q
    |||||| |||||||||||| | || | |||||||||||||||||| |||||||||||    
T  22804136 gaatctggacactccacttgttcataatttaattgtgtgagctctgaccactagcta 22804192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 52992103 - 52992025
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatctt-gacactccacttctccagatttaattgtgtgagctcta 92  Q
    |||||||||||||||||| | ||||| ||||||||| | | ||||| ||||||||||| ||||||||||||||||||||    
T  52992103 gatattgcataatttatgcaagggtcgggattcgaaccctcgacaccccacttctccatatttaattgtgtgagctcta 52992025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 44764787 - 44764842
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccacta-gctattagac 109  Q
    ||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||    
T  44764787 gacactccacttctccacatttaattgtgtgagctctagccactaggctattagac 44764842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 26880206 - 26880285
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatctt--gacactccacttctccagatttaattgtgtgagctctaacca 96  Q
    ||||||||||||||| ||||||| || |||||| |||  ||||| ||||||||||| |||||| |||||||||||||||||    
T  26880206 attgcataatttatgcaggggtcggggttcgaa-cttcagacaccccacttctccacatttaaatgtgtgagctctaacca 26880285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 24303419 - 24303511
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccacta-gctattaga 108  Q
    ||||||||||||||| ||||| | || |||||| |  | |||| ||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  24303419 attgcataatttatgcaggggccggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctctagccactaggctattaga 24303511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 4227785 - 4227710
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||||||||||||| ||||||| || |||||| ||  ||||| ||||||||||| | ||||||||||||||||||    
T  4227785 attgcataatttatgcaggggtcggggttcgaactccggacaccccacttctccataattaattgtgtgagctcta 4227710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 18764908 - 18764814
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaat-cttgacactccacttctccagatttaattgtgtgagctctaaccacta-gctattagacca 111  Q
    ||||||||||||||| || ||||||| ||||||  || ||||| ||||||||| | |||||| ||||||||||||| |||||| ||||||||||||    
T  18764908 attgcataatttatgcagtggtcagggttcgaacactggacac-ccacttctctacatttaaatgtgtgagctctagccactaggctattagacca 18764814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 29531243 - 29531326
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttgacactc-cacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||| ||||||| || |||||  |  ||||  | |||||||||| ||||||||||||||||||||||||||||    
T  29531243 attgcataatttatgaaggggtcggggttcgaccccggacaacctcacttctccacatttaattgtgtgagctctaaccactag 29531326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 52945921 - 52946007
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||| ||||||| || |||||| |   |||||||||||||||| | ||||||||| |||||||||||||||||    
T  52945921 gatattgcatattatatgcaggggtcggggttcgaacccgtacactccacttctccacaatttaattgtatgagctctaaccactag 52946007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 5174057 - 5173968
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaatcttga-cactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||||||| |||||   || |||||| |  || ||| ||||||||||| |||||||||||||||||||| |||||||    
T  5174057 agagacattgcataatttatgcaggggcaggggttcgaaccccgaacaccccacttctccacatttaattgtgtgagctctagccactag 5173968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 25716055 - 25716010
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||||    
T  25716055 gacactccacttctccacatttaattgtttgagctctagccactag 25716010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 49194735 - 49194650
Alignment:
Q  16 atattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccaga-tttaattgtgtgagctctaaccacta 99  Q
    |||||||||| | ||||||||||||||| |||||| |  | ||||| |||||||||| | ||||||||||||||||||| ||||||    
T  49194735 atattgcatattatatgtaggggtcagggttcgaaccccggacacttcacttctccacaatttaattgtgtgagctctagccacta 49194650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 9685025 - 9685108
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttga-cactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||| |||||   || ||||||||  || ||||||||||||||| |||||| ||||||||||| | |||||||    
T  9685025 attgcataatttatgcaggggctggggttcgaatcccgaacactccacttctccatatttaaatgtgtgagctccagccactag 9685108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 17729017 - 17729104
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||| ||||||| || |||||| | || |||||||||||||||| | |||| |||||||||||||| |||||||    
T  17729017 gatattgcatattatatgcaggggtcggggttcgaaccctggacactccacttctccacaattaaattgtgtgagctctagccactag 17729104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 19030246 - 19030333
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||| ||||||| || |||||| | || |||||||||||||||| | |||| |||||||||||||| |||||||    
T  19030246 gatattgcatattatatgcaggggtcggggttcgaaccctggacactccacttctccacaattaaattgtgtgagctctagccactag 19030333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 6488191 - 6488237
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  6488191 gacactccacttctccacaatttaattgtgtgagctctagccactag 6488237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 10349467 - 10349513
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  10349467 gacactccacttctccacaattaaattgtgtgagctctaaccactag 10349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 17218555 - 17218601
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  17218555 gacactccacttctccacaatttaattgtgtgagctctagccactag 17218601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 22501934 - 22501888
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  22501934 gacactccacttctccacaatttaattgtgtgagctctagccactag 22501888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 33606943 - 33606897
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  33606943 gacactccacttctccacaatttaattgtgtgagctctagccactag 33606897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 44764573 - 44764527
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  44764573 gacactccacttctccataatttaattgtgtgagctctagccactag 44764527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 15006016 - 15006053
Alignment:
Q  62 cacttctccagatttaattgtgtgagctctaaccacta 99  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  15006016 cacttctccacatttaattgagtgagctctaaccacta 15006053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 15975410 - 15975365
Alignment:
Q  56 acactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||    
T  15975410 acactccacttctccataattaaattgtgtgagctctaaccactag 15975365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 19222627 - 19222554
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctc 90  Q
    ||||||||||||||| ||||| | || |||||| |  | |||| ||||||||||| ||||||||||||||||||    
T  19222627 attgcataatttatgcaggggccggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctc 19222554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 38819326 - 38819281
Alignment:
Q  56 acactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||    
T  38819326 acactccacttctccacaatttaattgtgtgagctctagccactag 38819281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 40192223 - 40192260
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  40192223 gacactccacttctccacatttaattgtgtgagttcta 40192260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 49443426 - 49443381
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| |||||| ||||||||||||| |||||||    
T  49443426 gacaccccacttctccacatttaaatgtgtgagctctagccactag 49443381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 49577436 - 49577473
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  49577436 gacaccccacttctccatatttaattgtgtgagctcta 49577473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 54769833 - 54769796
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  54769833 gacaccccacttctccacatttaattgtgtgagctcta 54769796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 40363115 - 40363029
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatctt-gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||||||||||| || |||||| |   ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  40363115 gatattgcatattatatgtaggggtcggggttcgaacccccgacactctacttctccatatttaattgtgtgagctctaaccactag 40363029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 1027680 - 1027591
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaatct-tgacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||||||| | |||||||| |||||| ||  ||||||| |||||| || |||||||||||||||||||  |||||||    
T  1027680 agagatattgcataatttatgcaagggtcagggttcgaacctcagacactctacttctacacatttaattgtgtgagctctggccactag 1027591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 3596271 - 3596361
Alignment:
Q  10 gcagagatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||||| ||||||||||||||| ||||||| || |||||| |  | |||| ||||||||||| |||||||||||||||||| | ||||||    
T  3596271 gcagagacattgcataatttatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctccagccacta 3596361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 13242778 - 13242702
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaatct-tgacactccacttctccagatttaattgtgtgag 87  Q
    ||||||||||||||||||||| ||||||| || |||||| ||  |||||  |||||||||| |||||||||||||||    
T  13242778 agagatattgcataatttatgcaggggtcggggttcgaacctcggacacctcacttctccacatttaattgtgtgag 13242702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 2289637 - 2289723
Alignment:
Q  16 atattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    |||||||||| | |||| |||||||||| |||||| | || ||||||| |||||||| | |||||||||||||| ||||||||||||    
T  2289637 atattgcatattatatgcaggggtcagggttcgaaccctggacactccccttctccacaatttaattgtgtgagttctaaccactag 2289723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 3287056 - 3287014
Alignment:
Q  58 actccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
T  3287056 actccacttctccacatttaattgtgtgagctctagccactag 3287014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 43214382 - 43214466
Alignment:
Q  15 gatattgcataatttatgtagggg-tcaggattcgaatcttgacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||||||||||||| | ||| |||||| |  |||||  ||||||||||  |||||||||||||||||||||||||||    
T  43214382 gatattgcataatttatgtaggggctgagg-ttcgaacca-gacacctcacttctccacgtttaattgtgtgagctctaaccactag 43214466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 44666387 - 44666301
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||| |||| |||| || || |||||| |  | ||| |||||||||||| | ||||||||||||||||||||||||||    
T  44666387 gatattgcataatatatgcagggatcggggttcgaaccccggacattccacttctccacaattaattgtgtgagctctaaccactag 44666301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 27497530 - 27497485
Alignment:
Q  56 acactccacttctccagatttaattgtgtgagctctaaccactagc 101  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||    
T  27497530 acaccccacttctccacatttaattatgtgagctctaaccactagc 27497485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 29942129 - 29942092
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  29942129 gacactccacttctccatatttaattgtgtgagctcta 29942092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 4858742 - 4858662
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||| |||||   || ||||||||| | ||| ||||||||||| |  ||| |||||||||||||||||||||    
T  4858742 attgcataatttatgcaggggctggggttcgaatctcggcaccccacttctccaca--taactgtgtgagctctaaccactag 4858662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 40403618 - 40403661
Alignment:
Q  56 acactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||| |||||||||| | |||||||||||||||||||||||||    
T  40403618 acactacacttctccacaattaattgtgtgagctctaaccacta 40403661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 5613021 - 5613067
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||||    
T  5613021 gacaccccacttctccacaatttaattgtgtgagctctaaccactag 5613067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 13773467 - 13773513
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  13773467 gacactccacttctccacaattaaattgtgtgagctctaaccactag 13773513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 27913473 - 27913427
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||| |||||||||||||||    
T  27913473 gacactccacttctccacaatttaattgtgtaagctctaaccactag 27913427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 36182709 - 36182755
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  36182709 gacactccacttctccacaattaaattgtgtgagctctaaccactag 36182755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 41566829 - 41566875
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  41566829 gacactccacttctccacaatttaattgtgtgagctctagccactag 41566875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 3154026 - 3154107
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccact 98  Q
    ||||||||||||||| ||||  | || |||||| | || |||||||||||||||  |||||||||||||| ||||| |||||    
T  3154026 attgcataatttatgcagggaccggggttcgaaccctggacactccacttctcctcatttaattgtgtgacctctagccact 3154107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 17601146 - 17601191
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccacta 99  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||    
T  17601146 gacactccacttctccacaatttaattatgtgagctctaaccacta 17601191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 20919677 - 20919722
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  20919677 gacaccccacttctccacatttaattatgtgagctctagccactag 20919722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 21438901 - 21438946
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccacta 99  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||    
T  21438901 gacactccacttctccacaatttaattgtgtgagctctaatcacta 21438946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 34355788 - 34355833
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccacta 99  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||    
T  34355788 gacactccacttctccacaatttaattgtatgagctctaaccacta 34355833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 15146352 - 15146388
Alignment:
Q  56 acactccacttctccagatttaattgtgtgagctcta 92  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  15146352 acaccccacttctccatatttaattgtgtgagctcta 15146388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 41185458 - 41185418
Alignment:
Q  60 tccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||| || |||||||||| |||||||||||||||||    
T  41185458 tccacttctgcacatttaattgtatgagctctaaccactag 41185418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 41083584 - 41083496
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||||||| ||||||| || ||||||||  ||||| |||||||||||  ||||||| || |||||||| |||||||    
T  41083584 agagacattgcataatttatgcaggggtcggggttcgaatccggacaccccacttctccacgtttaattttgggagctctagccactag 41083496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 35241419 - 35241508
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaatcttgacactccacttctcca-gatttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||| | |||| ||||||| || |||||| | ||||||||||||||||||  ||||||||||||||| | || |||||||    
T  35241419 agagatattgcatattatatgcaggggtcggggttcgaaccctgacactccacttctccacaatttaattgtgtgagttttagccactag 35241508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 11313507 - 11313589
Alignment:
Q  18 attgcataatttatgtagggg-tcaggattcgaatc-ttgacactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||||||| ||||||||||| | ||| |||||||| ||||||| |||||||| || |||||||||||||||||| ||||||||    
T  11313507 attgcataaattatgtaggggctgagg-ttcgaatccttgacaccccacttctgcatatttaattgtgtgagctccaaccacta 11313589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 8571823 - 8571905
Alignment:
Q  19 ttgcataatttatgtaggggtcaggattcgaatcttga-cactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||| ||||||| || |||||| |  || ||| | ||||||||| |||||||||||||||||||| |||||||    
T  8571823 ttgcataatttatgcaggggtcggggttcgaaccccgaacaccctacttctccacatttaattgtgtgagctctagccactag 8571905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 20145608 - 20145530
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctcta 92  Q
    |||||||||||||||||| | ||| | || |||||| || | |||| ||||||||||| ||||||||||||||||||||    
T  20145608 gatattgcataatttatgcaagggccggggttcgaacctcggacaccccacttctccacatttaattgtgtgagctcta 20145530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 36124426 - 36124512
Alignment:
Q  16 atattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    |||||||||| | |||| ||||||| || ||||||||  | |||||||||||||||| | ||||| |||||||||||||||||||||    
T  36124426 atattgcatattatatgcaggggtcggggttcgaatcccggacactccacttctccacaatttaactgtgtgagctctaaccactag 36124512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 36735897 - 36735985
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatctt-gacactccacttctccaga--tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||||||||||| |  |||||| | | ||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  36735897 gatattgcatattatatgtaggggtcggagttcgaaccctagacactccacttctccacaaatttaattgtgtgagctctagccactag 36735985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 1382199 - 1382243
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||    
T  1382199 gacactccacttttccacatttaattgtgtgagctttaaccacta 1382243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 4068049 - 4068093
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||    
T  4068049 gacaccccacttctccacatttaattgtgtgagctccaaccacta 4068093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 33736058 - 33735975
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||||||||| | |||| ||||||| || |||||| | |||||| ||| ||||||| | |||||||||||||||||| ||||||    
T  33736058 gatattgcatattatatgcaggggtcggggttcgaaccctgacac-ccagttctccacaattaattgtgtgagctctagccacta 33735975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 7545439 - 7545356
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaat-cttgacactccacttctccagattt-aattgtgtgagctctaaccacta 99  Q
    |||||||| | |||| |||||||||||||||||| |  ||||| ||||||||||| |||| || ||||||||| ||||||||||    
T  7545439 attgcatattatatgcaggggtcaggattcgaatcccggacaccccacttctccacatttaaaatgtgtgagcgctaaccacta 7545356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 11146532 - 11146486
Alignment:
Q  55 gacactccacttctccagattt-aattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | || ||||||||||||||||||||||||    
T  11146532 gacactccacttctccacagttcaattgtgtgagctctaaccactag 11146486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 13958449 - 13958495
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  13958449 gacactccacttctccataatttaattgtgtgagctctagccactag 13958495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 17545175 - 17545129
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  17545175 gacactccacttctccataatttaattgtgtgagctctagccactag 17545129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 29045936 - 29045982
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||    
T  29045936 gacactcgacttctccacaatttaattgtgtgagctctaaccactag 29045982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 5908321 - 5908276
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||| ||| |||||||| |||||||||||||||||||| |||||||    
T  5908321 gacattccgcttctccatatttaattgtgtgagctctagccactag 5908276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 6734777 - 6734696
Alignment:
Q  20 tgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccagattt-aattgtgtgagctctaaccactag 100  Q
    |||||||| |||||||||| | || ||||||||  ||||| ||||||||||| |||| || ||||||||||| | |||||||    
T  6734777 tgcataatatatgtaggggccgggtttcgaatcccgacaccccacttctccacatttaaaatgtgtgagctccagccactag 6734696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 17064861 - 17064816
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  17064861 gacaccccacttctccacatttaattgtgtgagttctagccactag 17064816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 24477892 - 24477937
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| |||||||||||||||||| | |||||||    
T  24477892 gacaccccacttctccacatttaattgtgtgagctccagccactag 24477937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 28906873 - 28906914
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaacca 96  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  28906873 gacactccacttctccacatttaattgtgtatgctctaacca 28906914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 28943268 - 28943309
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaacca 96  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  28943268 gacactccacttctccacatttaattgtgtatgctctaacca 28943309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 30801004 - 30800959
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||| ||||||||| |||||||| |||||| ||||||||||||    
T  30801004 gacactcaacttctccacatttaattctgtgagttctaaccactag 30800959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 38696757 - 38696802
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||| || |||||| ||||||||||||| |||||||    
T  38696757 gacactccacttcttcacatttaaatgtgtgagctctatccactag 38696802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 41179806 - 41179761
Alignment:
Q  55 gacactccacttctccagattt-aattgtgtgagctctaaccacta 99  Q
    ||||||||||||||||| |||| |||||||||||||||| ||||||    
T  41179806 gacactccacttctccacatttaaattgtgtgagctctagccacta 41179761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 12474050 - 12474093
Alignment:
Q  56 acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||    
T  12474050 acaccccacttctccacatt-aattgtgtgagctctaaccactag 12474093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 14804985 - 14804941
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  14804985 gacaccccacttctccacatttaattgtgtgaactctagccacta 14804941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 23427058 - 23427098
Alignment:
Q  56 acactccacttctccagatttaattgtgtgagctctaacca 96  Q
    |||||||||||||||| |||||||| ||||||||| |||||    
T  23427058 acactccacttctccacatttaattctgtgagctccaacca 23427098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 30783759 - 30783679
Alignment:
Q  14 agatattgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctcca-gatttaattgtgtgagctcta 92  Q
    |||||||||||| | |||| || |||| || |||||| ||  |||||| |||||||||| |||||||||||||||||||||    
T  30783759 agatattgcatattatatgcagaggtcggggttcgaactccggacacttcacttctccatgatttaattgtgtgagctcta 30783679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 35796032 - 35796076
Alignment:
Q  56 acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||| ||| ||||||| |||||||||||| |||||||||||||||    
T  35796032 acacaccaattctccacatttaattgtgtaagctctaaccactag 35796076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 24910522 - 24910450
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtga 86  Q
    |||||||||||||||||| |||||||||| |||||| |  | |||||||||||||||| ||||||||||||||    
T  24910522 gatattgcataatttatgcaggggtcagggttcgaaccccggacactccacttctccatatttaattgtgtga 24910450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 23991305 - 23991222
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||| ||||| | || |||||| | || |||| ||||||||||| |||||||||||||||||||| |||||||    
T  23991305 attgcataatttatgcaggggccggggttcgaaccctggacaccccacttctccacatttaattgtgtgagctctagccactag 23991222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 31124679 - 31124584
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccagatttaattgtgtgagctctaaccacta-gctattagacca 111  Q
    ||||||||||||||| ||||| | || |||||| ||  || || ||||||||||| |||||||||||||||||||| |||||| ||||||||||||    
T  31124679 attgcataatttatgcaggggccggggttcgaactccggataccccacttctccacatttaattgtgtgagctctagccactaggctattagacca 31124584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 37280731 - 37280822
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccagatttaattgtgtgagctctaaccacta-gctattaga 108  Q
    |||||||||||||| |||||||| |||||||||    | ||| ||||||||||| |||||||||||||||||| | |||||| |||||||||    
T  37280731 attgcataatttatataggggtcgggattcgaactccggcaccccacttctccacatttaattgtgtgagctccagccactaggctattaga 37280822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 45416219 - 45416136
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||| ||||| | || ||||||||  | |||| ||||||||||| |||||||||||||| |||||||||||||    
T  45416219 attgcataatttatgcaggggccggggttcgaatcccggacaccccacttctccacatttaattgtgtgaactctaaccactag 45416136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 34557374 - 34557281
Alignment:
Q  9 agcagagatattgcataa-tttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| || ||||||||| |||||| ||||||| || ||||||||||| |||| | ||||||||| |||||| ||||||||||||| |||||||    
T  34557374 agcagggacattgcataaatttatgcaggggtcggggttcgaatcttggacaccctacttctccacatttaaatgtgtgagctctagccactag 34557281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 47469076 - 47469031
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  47469076 gacaccccacttctccacatttaattgtgtgagctctaaccactag 47469031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 100
Target Start/End: Complemental strand, 39670826 - 39670787
Alignment:
Q  61 ccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  39670826 ccacttctccacatttaattgtgtgagctctaaccactag 39670787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 11081260 - 11081182
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttgacactccacttctcca-gatttaattgtgtgagctcta 92  Q
    ||||||||||| | ||| ||||||||||  |||||| || |||||||||||||||||  |||||||||||| |||||||    
T  11081260 gatattgcatattatatctaggggtcagagttcgaacctcgacactccacttctccacaatttaattgtgtaagctcta 11081182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 48897120 - 48897074
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  48897120 gacactccacttctccataatttaattgtgtgagctctaaccactag 48897074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 7491828 - 7491873
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||    
T  7491828 gacaccccacttctccacatttaattgtgtgagctctagccactag 7491873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 10842060 - 10842015
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||    
T  10842060 gacactccacttctccatatttaattgtgtaagctctatccactag 10842015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 17058771 - 17058816
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||    
T  17058771 gacaccccacttctccacaattaattgtgtgagctctaaccactag 17058816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 26824266 - 26824315
Alignment:
Q  63 acttctccagatttaattgtgtgagctctaaccacta-gctattagacca 111  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||||||    
T  26824266 acttctccacatttaattgtgtgagctctagccactaggctattagacca 26824315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 32119421 - 32119505
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttgacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||||||||||| || |||||| || ||||| ||| ||||||| | |||||| |||||||||| ||||||||    
T  32119421 gatattgcatattatatgtaggggtcggggttcgaacctggacac-ccatttctccataattaattatgtgagctctgaccactag 32119505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 41927051 - 41927088
Alignment:
Q  63 acttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  41927051 acttctccacatttaattgtgtgagctctaaccactag 41927088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 35283569 - 35283613
Alignment:
Q  56 acactccacttctccaga-tttaattgtgtgagctctaaccacta 99  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  35283569 acactccacttctccacaatttaattgtgtgagctctaaccacta 35283613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 1604268 - 1604181
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatc-ttgacactccacttctccagatttaat-tgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||||||||||| || |||||| | |||||||  || ||||||| ||||||  |||||||||||||||||||||    
T  1604268 gatattgcatattatatgtaggggtcggggttcgaacccttgacaccacaattctccacatttaaaatgtgtgagctctaaccactag 1604181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 2514606 - 2514555
Alignment:
Q  61 ccacttctccagatttaattgtgtgagctctaaccacta-gctattagacca 111  Q
    ||||||||||| |||||||||||||||||| | |||||| ||||||||||||    
T  2514606 ccacttctccacatttaattgtgtgagctccagccactatgctattagacca 2514555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 3694959 - 3694876
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttgacactccacttctcca-gatttaattgtgtgagctctaaccac 97  Q
    ||||||||||| | |||||||| | | || ||||||||  |||||||||||||||||  ||||||||||| |||||||| ||||    
T  3694959 gatattgcatattatatgtaggagccggggttcgaatccggacactccacttctccacaatttaattgtgcgagctctagccac 3694876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 8865880 - 8865967
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctcca-gatttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||| ||||||| |||||||||  || |||||||||||||||||  ||||||||||||||| |||  |||||||    
T  8865880 gatattgcatattatatgcaggggtcgggattcgaaccctggacactccacttctccacaatttaattgtgtgagttctggccactag 8865967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 44019302 - 44019385
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccaga-tttaattgtgtgagctctaacca 96  Q
    ||||||||||  | |||| | ||||| |||||||||||  | |||||||||||||||| | |||||||||||||||||||||||    
T  44019302 gatattgcattttatatgcaagggtcgggattcgaatcccggacactccacttctccacaatttaattgtgtgagctctaacca 44019385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 50119039 - 50119082
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccact 98  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||    
T  50119039 gacaccccacttctccacatttaattgtgtgagctctagccact 50119082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 7166230 - 7166184
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  7166230 gacactccacttctccacaatttaattgtgtgagctctagccactag 7166184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 11215068 - 11215114
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  11215068 gacactccacttctccacaatttaattgtgtgagctctagccactag 11215114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 11860071 - 11860141
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgag 87  Q
    |||||||||||||| |||||||| || |||||| |  | |||| ||||||||||| |||||||||||||||    
T  11860071 attgcataatttatataggggtcggggttcgaaccccggacaccccacttctccacatttaattgtgtgag 11860141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 18467201 - 18467155
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18467201 gacactccacttctccacaatttaattgtgtgagctctagccactag 18467155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 18534024 - 18534114
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    |||||||||||||| | |||||||| ||| || |||||| |  | |||||||||||||||| | |||| |||||||||||||| |||||||    
T  18534024 agagatattgcatattatatgtaggagtcggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactag 18534114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 22563453 - 22563499
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  22563453 gacactccacttctccacaatttaattgtgtgagctctagccactag 22563499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 24874997 - 24875083
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||||||| | |||   || |||||| || | |||| ||||||||||| |||||||||||||||||| | |||||||    
T  24874997 gatattgcataatttatgcatgggcaggggttcgaacctcggacaccccacttctccatatttaattgtgtgagctccagccactag 24875083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 34562790 - 34562752
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaa 93  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  34562790 gacaccccacttctccatatttaattgtgtgagctctaa 34562752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 45333715 - 45333669
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  45333715 gacactccacttctccacaatttaattgtgtgagctctagccactag 45333669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 45517271 - 45517225
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  45517271 gacactccacttctccacaatttaattgtgtgagctctagccactag 45517225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 11333731 - 11333768
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  11333731 gacaccccacttctccacatttaattgtgtgagctcta 11333768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 11491752 - 11491789
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  11491752 gacaccccacttctccacatttaattgtgtgagctcta 11491789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 16526179 - 16526134
Alignment:
Q  56 acactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||    
T  16526179 acactccacttctccacaattaaattgtgtgagctctaaccactag 16526134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 16661320 - 16661361
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaacca 96  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  16661320 gacactccacttctccacatttaattgtgtatgctctaacca 16661361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 25036303 - 25036230
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttga-cactccacttctccagatttaattgtgtgagctc 90  Q
    ||||||||||||||| ||||| | ||||||||| |  || ||| ||| ||||||| ||||||||||||||||||    
T  25036303 attgcataatttatgcaggggccgggattcgaaccccgaacaccccatttctccacatttaattgtgtgagctc 25036230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 25041515 - 25041442
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttga-cactccacttctccagatttaattgtgtgagctc 90  Q
    ||||||||||||||| ||||| | ||||||||| |  || ||| ||| ||||||| ||||||||||||||||||    
T  25041515 attgcataatttatgcaggggccgggattcgaaccccgaacaccccatttctccacatttaattgtgtgagctc 25041442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 27178752 - 27178667
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||||| ||| | |||| ||||| | | |||||||||| | |||| ||||||||||| ||| || ||||||||||||||||||||    
T  27178752 gatattgtatattatatgcaggggccggaattcgaatctcggacaccccacttctccacattaaaatgtgtgagctctaaccacta 27178667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 41620454 - 41620491
Alignment:
Q  63 acttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  41620454 acttctccacatttaattgtgtgagctctagccactag 41620491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 43021661 - 43021580
Alignment:
Q  20 tgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||| |||||| ||||||| || |||||| || | |||| ||||||||||| ||||||| ||||||||| || |||||||    
T  43021661 tgcatattttatgcaggggtcggggttcgaacctcggacaccccacttctccacatttaatcgtgtgagctgtagccactag 43021580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 32589490 - 32589446
Alignment:
Q  57 cactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||    
T  32589490 cactccacttctccacaattaaattgtgtgagctctaaccactag 32589446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 8439701 - 8439784
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccaga-tttaattgtgtgagctctaacca 96  Q
    ||||||||||| | |||| ||||||| ||||||||||| || |||||| ||||||||| | |||||||||||||||||||||||    
T  8439701 gatattgcatattatatgcaggggtcgggattcgaatcctggacactcaacttctccacaatttaattgtgtgagctctaacca 8439784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 10913125 - 10913037
Alignment:
Q  13 gagatattgcataatttatgtaggggtcaggattcgaatctt-gacactccacttctccaga-tttaattgtgtgagctctaaccacta 99  Q
    ||||||||||||| | |||| ||||||| || |||||| |   ||||||||||||||||| | ||||||||||||||||||| ||||||    
T  10913125 gagatattgcatattatatgcaggggtcggggttcgaaccccagacactccacttctccataatttaattgtgtgagctctagccacta 10913037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 19892320 - 19892233
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||||||||||| || |||||| |  | |||||||||||||||| | |||||||||| |||||||| |||||||    
T  19892320 gatattgcatattatatgtaggggtcggggttcgaaccccggacactccacttctccacaatttaattgtgagagctctagccactag 19892233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 24319042 - 24319117
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctcta 92  Q
    ||||||||||||||| ||||| | || |||||| |  | |||||||||||||||| | ||||||||||||||||||    
T  24319042 attgcataatttatgcaggggccggggttcgaaccccggacactccacttctccacaattaattgtgtgagctcta 24319117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 1435876 - 1435918
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccac 97  Q
    |||| |||||||||||| |||||||||||||||||||| ||||    
T  1435876 gacattccacttctccacatttaattgtgtgagctctagccac 1435918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 3640581 - 3640627
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  3640581 gacactccacttctccacaatttaattgtgtgagctctagccactag 3640627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 3795777 - 3795731
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  3795777 gacactccacttctccacaatttaattgtgtgagctctagccactag 3795731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 20728974 - 20729064
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaat-cttgacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||| | |||||| ||| | || ||||||| || |||||||||||||  || | ||||||||||||||||||| |||||||    
T  20728974 agagatattgcatattatatgtaagggccggggttcgaattctggacactccacttcctcacaatttaattgtgtgagctctagccactag 20729064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 26347471 - 26347517
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  26347471 gacactccacttctccacaatttaattgtgtgagctctagccactag 26347517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 28222929 - 28222975
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  28222929 gacactccacttctccataattaaattgtgtgagctctaaccactag 28222975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 32166436 - 32166482
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  32166436 gacactccacttctccacaatttaattgtgtgagctctagccactag 32166482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 3298964 - 3298927
Alignment:
Q  61 ccacttctccagatttaattgtgtgagctctaaccact 98  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  3298964 ccacttctccatatttaaatgtgtgagctctaaccact 3298927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 6210121 - 6210166
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccacta 99  Q
    ||||||||||||||||| | |||||||||||||| |||||||||||    
T  6210121 gacactccacttctccacaatttaattgtgtgagttctaaccacta 6210166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 14709067 - 14708978
Alignment:
Q  12 agagatattgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccaga-tttaattgtgtgagctctaaccacta 99  Q
    |||||||||||||| | |||||||||| | || |||||| ||  ||||||||||||||||  | |||||||||||||| |||| ||||||    
T  14709067 agagatattgcatattatatgtaggggccggggttcgaactccggacactccacttctcctcaatttaattgtgtgagttctagccacta 14708978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 22574938 - 22574983
Alignment:
Q  56 acactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||    
T  22574938 acactccacttctccacaattaaattgtgtgagctctaaccactag 22574983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 29646551 - 29646506
Alignment:
Q  55 gacactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    ||||| ||||||||||| |||||||||||||||||| | |||||||    
T  29646551 gacaccccacttctccacatttaattgtgtgagctccagccactag 29646506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 30504554 - 30504591
Alignment:
Q  62 cacttctccagatttaattgtgtgagctctaaccacta 99  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  30504554 cacttatccatatttaattgtgtgagctctaaccacta 30504591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 7418345 - 7418389
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccact 98  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||    
T  7418345 gacactccacttctccataatttaattgtgtgagctctagccact 7418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 9689344 - 9689272
Alignment:
Q  18 attgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccagatttaattgtgtgagct 89  Q
    |||||||||||||||||| |||| || ||||||  || ||||| ||||| ||||| |||||| ||||||||||    
T  9689344 attgcataatttatgtagaggtcggggttcgaaccctggacaccccactcctccatatttaaatgtgtgagct 9689272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 19374842 - 19374798
Alignment:
Q  56 acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||||| ||||||||||| ||||| || |||||||    
T  19374842 acactccacttctccaaatttaattgtgagagctgtagccactag 19374798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 24401 - 24492
Alignment:
Q  10 gcagagatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccagatttaattgtgtgagctctaaccactag 100  Q
    |||| |||||||||||||||||| ||||| | || |||||| |  | ||||||||||||| || |||||| ||||||||||||| |||||||    
T  24401 gcagggatattgcataatttatgcaggggccggggttcgaaccccggacactccacttcttcacatttaaatgtgtgagctctagccactag 24492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 50045 - 49958
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaa-tcttgacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | ||||||||||| ||| |||||| ||  ||||||| ||||||||| | ||||||||||||||||||||| |||||    
T  50045 gatattgcatattatatgtaggggttagggttcgaactccggacactctacttctccacaatttaattgtgtgagctctaactactag 49958  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 65831 - 65744
Alignment:
Q  15 gatattgcataatttatgtaggggtcaggattcgaatcttg-acactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||| | |||||||||||  || ||||||||  | ||||||||||||| || | |||||||||||||||||||| ||||||    
T  65831 gatattgcatattatatgtaggggttggggttcgaatcccggacactccacttcttcacaatttaattgtgtgagctctaatcactag 65744  T

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Target: scaffold0445 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 4017 - 3971
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||    
T  4017 gacactccacttctccacaatttaattgtgtgagctctagccactag 3971  T

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Target: scaffold0179 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 6044 - 6090
Alignment:
Q  55 gacactccacttctccaga-tttaattgtgtgagctctaaccactag 100  Q
    |||||||||||||| || | |||||||||||||||||||||||||||    
T  6044 gacactccacttcttcacaatttaattgtgtgagctctaaccactag 6090  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 23427 - 23473
Alignment:
Q  55 gacactccacttctccagatttaa-ttgtgtgagctctaaccactag 100  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  23427 gacactccacttctccataattaaattgtgtgagctctaaccactag 23473  T

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