View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9902_low_6 (Length: 441)

Name: NF9902_low_6
Description: NF9902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9902_low_6
NF9902_low_6
[»] chr7 (53 HSPs)
chr7 (18-428)||(35203215-35203626)
chr7 (113-211)||(46354188-46354286)
chr7 (88-207)||(43557470-43557589)
chr7 (113-204)||(47716460-47716551)
chr7 (89-204)||(7879639-7879752)
chr7 (113-204)||(42805525-42805616)
chr7 (113-206)||(27629633-27629724)
chr7 (113-207)||(3469220-3469316)
chr7 (87-207)||(11617607-11617725)
chr7 (87-211)||(34626227-34626348)
chr7 (87-206)||(2541038-2541155)
chr7 (113-207)||(7644954-7645047)
chr7 (129-207)||(12473302-12473380)
chr7 (121-207)||(22699021-22699107)
chr7 (87-204)||(38262215-38262330)
chr7 (113-207)||(21172054-21172144)
chr7 (90-207)||(47077877-47077990)
chr7 (113-205)||(42476873-42476961)
chr7 (86-207)||(5180173-5180294)
chr7 (131-204)||(42798670-42798743)
chr7 (113-207)||(10693118-10693208)
chr7 (92-207)||(14099030-14099143)
chr7 (92-207)||(14409047-14409160)
chr7 (113-207)||(42391145-42391235)
chr7 (88-206)||(18512473-18512588)
chr7 (131-206)||(19426950-19427025)
chr7 (113-207)||(33871955-33872046)
chr7 (130-208)||(16341275-16341353)
chr7 (113-205)||(23419719-23419809)
chr7 (113-207)||(32758259-32758349)
chr7 (87-204)||(35334835-35334948)
chr7 (87-207)||(18747484-18747603)
chr7 (121-207)||(29907417-29907502)
chr7 (127-204)||(1423967-1424044)
chr7 (113-207)||(48735167-48735258)
chr7 (113-207)||(31591154-31591244)
chr7 (113-207)||(19265813-19265904)
chr7 (89-207)||(19266448-19266564)
chr7 (113-207)||(28362190-28362282)
chr7 (113-207)||(32233180-32233271)
chr7 (88-199)||(39123896-39124010)
chr7 (150-212)||(42495916-42495977)
chr7 (86-186)||(38604546-38604643)
chr7 (115-207)||(48123531-48123621)
chr7 (95-194)||(1408468-1408565)
chr7 (113-207)||(11741793-11741883)
chr7 (113-204)||(28078177-28078265)
chr7 (131-193)||(2662996-2663056)
chr7 (124-207)||(14732877-14732959)
chr7 (113-193)||(8148990-8149069)
chr7 (87-193)||(21566447-21566552)
chr7 (135-197)||(23753814-23753876)
chr7 (113-193)||(15108442-15108519)
[»] chr5 (34 HSPs)
chr5 (86-207)||(27328750-27328871)
chr5 (87-207)||(38879579-38879699)
chr5 (87-202)||(43574609-43574722)
chr5 (113-204)||(4619149-4619240)
chr5 (113-207)||(43334200-43334295)
chr5 (87-204)||(24448891-24449006)
chr5 (113-207)||(42924877-42924971)
chr5 (113-193)||(13801812-13801892)
chr5 (113-207)||(32703422-32703512)
chr5 (113-204)||(41014320-41014408)
chr5 (87-207)||(28516452-28516571)
chr5 (113-206)||(8170029-8170118)
chr5 (113-186)||(20135623-20135696)
chr5 (88-204)||(22600455-22600569)
chr5 (87-174)||(7097779-7097863)
chr5 (87-207)||(22187283-22187403)
chr5 (113-207)||(35710311-35710401)
chr5 (140-207)||(37024626-37024691)
chr5 (113-207)||(39301121-39301214)
chr5 (113-193)||(19142988-19143065)
chr5 (150-207)||(22025541-22025598)
chr5 (88-187)||(12575680-12575779)
chr5 (90-204)||(1405188-1405300)
chr5 (145-204)||(23974781-23974840)
chr5 (131-214)||(34074623-34074706)
chr5 (87-193)||(208946-209050)
chr5 (114-173)||(2838811-2838867)
chr5 (138-214)||(4810000-4810076)
chr5 (132-190)||(7368413-7368469)
chr5 (131-174)||(16880708-16880751)
chr5 (138-207)||(1850638-1850706)
chr5 (166-207)||(22861762-22861803)
chr5 (132-201)||(41425952-41426021)
chr5 (133-185)||(29334415-29334467)
[»] chr3 (50 HSPs)
chr3 (86-207)||(8247705-8247826)
chr3 (86-205)||(46421053-46421172)
chr3 (87-207)||(13628809-13628929)
chr3 (89-199)||(10795444-10795554)
chr3 (87-205)||(29366739-29366857)
chr3 (113-204)||(13730647-13730738)
chr3 (113-207)||(34420688-34420781)
chr3 (87-204)||(40272831-40272946)
chr3 (87-207)||(516429-516550)
chr3 (113-207)||(45139521-45139615)
chr3 (138-211)||(19731018-19731091)
chr3 (87-207)||(5173738-5173857)
chr3 (121-193)||(14986991-14987063)
chr3 (113-207)||(22122962-22123052)
chr3 (131-205)||(7696948-7697020)
chr3 (132-207)||(26573147-26573222)
chr3 (87-174)||(45786233-45786320)
chr3 (113-207)||(53996610-53996703)
chr3 (131-207)||(1217110-1217184)
chr3 (138-211)||(19751594-19751667)
chr3 (113-207)||(39203536-39203626)
chr3 (87-207)||(54374364-54374483)
chr3 (132-207)||(30928209-30928284)
chr3 (113-184)||(49013518-49013589)
chr3 (115-204)||(7943013-7943100)
chr3 (113-207)||(9607223-9607317)
chr3 (152-210)||(26782383-26782441)
chr3 (138-204)||(54032627-54032693)
chr3 (115-207)||(26869727-26869816)
chr3 (143-207)||(10870025-10870088)
chr3 (113-204)||(22609789-22609877)
chr3 (132-207)||(45620890-45620966)
chr3 (131-206)||(12914096-12914171)
chr3 (87-193)||(829461-829566)
chr3 (113-207)||(33926103-33926195)
chr3 (87-204)||(45948857-45948972)
chr3 (131-204)||(4495725-4495798)
chr3 (113-169)||(353394-353450)
chr3 (131-198)||(31592878-31592943)
chr3 (113-207)||(25944489-25944582)
chr3 (153-207)||(53062058-53062112)
chr3 (87-187)||(54484730-54484829)
chr3 (113-201)||(16735467-16735552)
chr3 (131-207)||(52428538-52428615)
chr3 (131-203)||(6411883-6411954)
chr3 (121-212)||(12525422-12525511)
chr3 (131-174)||(9276317-9276360)
chr3 (114-193)||(55401210-55401288)
chr3 (113-174)||(47624095-47624153)
chr3 (138-207)||(39212010-39212079)
[»] chr2 (44 HSPs)
chr2 (87-207)||(10543696-10543816)
chr2 (113-207)||(24200668-24200762)
chr2 (87-207)||(14530316-14530436)
chr2 (87-207)||(19614990-19615109)
chr2 (87-204)||(8455335-8455450)
chr2 (87-207)||(10546160-10546279)
chr2 (87-204)||(25249757-25249871)
chr2 (114-207)||(7214532-7214625)
chr2 (131-207)||(12023980-12024055)
chr2 (87-206)||(19977733-19977850)
chr2 (113-207)||(21779306-21779396)
chr2 (87-204)||(14444730-14444844)
chr2 (114-206)||(17896258-17896349)
chr2 (87-206)||(9671180-9671295)
chr2 (113-204)||(5841029-5841120)
chr2 (140-211)||(33795279-33795350)
chr2 (131-204)||(17623565-17623638)
chr2 (131-204)||(17668003-17668076)
chr2 (88-207)||(21377093-21377210)
chr2 (87-207)||(31158458-31158578)
chr2 (114-193)||(15296452-15296530)
chr2 (132-207)||(23145760-23145835)
chr2 (132-207)||(23557550-23557625)
chr2 (151-214)||(29419970-29420033)
chr2 (113-207)||(32781333-32781425)
chr2 (87-204)||(11514437-11514551)
chr2 (131-207)||(5450283-5450360)
chr2 (113-203)||(22371059-22371144)
chr2 (87-207)||(25641500-25641617)
chr2 (87-170)||(25632544-25632625)
chr2 (131-206)||(17380298-17380372)
chr2 (114-207)||(23397764-23397853)
chr2 (87-204)||(25079736-25079852)
chr2 (87-189)||(36871509-36871607)
chr2 (138-214)||(2003604-2003681)
chr2 (131-207)||(44521434-44521510)
chr2 (132-207)||(4516413-4516488)
chr2 (133-204)||(17705496-17705567)
chr2 (131-190)||(30826052-30826110)
chr2 (131-190)||(30864478-30864536)
chr2 (87-204)||(39914325-39914440)
chr2 (131-207)||(99326-99400)
chr2 (151-204)||(44604855-44604907)
chr2 (86-211)||(26684638-26684763)
[»] scaffold0049 (1 HSPs)
scaffold0049 (87-207)||(58975-59095)
[»] chr6 (31 HSPs)
chr6 (87-207)||(29355874-29355994)
chr6 (88-207)||(12221935-12222054)
chr6 (113-207)||(2166455-2166549)
chr6 (113-207)||(2178088-2178182)
chr6 (138-207)||(8409241-8409310)
chr6 (114-207)||(9161121-9161213)
chr6 (113-207)||(1346962-1347052)
chr6 (113-207)||(1354802-1354892)
chr6 (87-205)||(18277212-18277328)
chr6 (87-207)||(23240843-23240959)
chr6 (98-193)||(11849065-11849159)
chr6 (121-211)||(6024227-6024317)
chr6 (113-207)||(7947416-7947509)
chr6 (87-207)||(3815096-3815214)
chr6 (131-207)||(32728217-32728293)
chr6 (114-205)||(14553511-14553602)
chr6 (113-164)||(24734683-24734734)
chr6 (131-205)||(28007628-28007700)
chr6 (138-204)||(1941856-1941922)
chr6 (158-204)||(14975168-14975214)
chr6 (141-207)||(20400665-20400731)
chr6 (150-207)||(17432338-17432395)
chr6 (131-200)||(33138838-33138907)
chr6 (121-193)||(2755475-2755547)
chr6 (139-207)||(13905048-13905116)
chr6 (140-211)||(17448318-17448389)
chr6 (138-207)||(12889424-12889493)
chr6 (131-187)||(25557743-25557797)
chr6 (131-187)||(26097178-26097232)
chr6 (121-201)||(4136568-4136648)
chr6 (143-211)||(15866110-15866178)
[»] chr1 (61 HSPs)
chr1 (87-207)||(10668246-10668366)
chr1 (87-207)||(27201668-27201788)
chr1 (88-207)||(18944664-18944783)
chr1 (113-204)||(30395771-30395862)
chr1 (87-207)||(35005144-35005264)
chr1 (87-207)||(14617059-14617177)
chr1 (87-207)||(35117784-35117905)
chr1 (131-211)||(25468324-25468404)
chr1 (113-212)||(32632602-32632698)
chr1 (113-207)||(47214532-47214622)
chr1 (113-204)||(20004135-20004226)
chr1 (87-207)||(46247972-46248090)
chr1 (131-207)||(18724606-18724682)
chr1 (131-207)||(41319867-41319943)
chr1 (121-207)||(9939482-9939568)
chr1 (121-207)||(33223005-33223089)
chr1 (87-204)||(46991828-46991943)
chr1 (115-207)||(2435833-2435924)
chr1 (88-207)||(11596534-11596650)
chr1 (139-211)||(24564361-24564433)
chr1 (113-207)||(34725143-34725233)
chr1 (96-171)||(19932781-19932856)
chr1 (87-166)||(42304226-42304305)
chr1 (87-204)||(23768339-23768454)
chr1 (113-211)||(27136696-27136793)
chr1 (130-207)||(50811960-50812038)
chr1 (130-207)||(17470406-17470483)
chr1 (131-207)||(38478343-38478417)
chr1 (113-207)||(35253232-35253322)
chr1 (88-211)||(44485129-44485250)
chr1 (113-164)||(18742002-18742053)
chr1 (87-204)||(6925124-6925239)
chr1 (123-193)||(22324928-22324997)
chr1 (92-207)||(20036241-20036355)
chr1 (150-207)||(22327120-22327177)
chr1 (87-207)||(27474302-27474419)
chr1 (114-211)||(45264445-45264541)
chr1 (87-207)||(19974093-19974211)
chr1 (113-193)||(39215003-39215082)
chr1 (113-207)||(45812582-45812672)
chr1 (131-209)||(12126898-12126974)
chr1 (113-207)||(22930114-22930204)
chr1 (87-164)||(4349702-4349777)
chr1 (141-207)||(31272446-31272511)
chr1 (131-204)||(4430087-4430160)
chr1 (88-207)||(6983831-6983946)
chr1 (113-207)||(15511193-15511288)
chr1 (113-212)||(19414455-19414550)
chr1 (87-187)||(31382233-31382330)
chr1 (87-207)||(19701591-19701710)
chr1 (101-164)||(21910682-21910743)
chr1 (110-213)||(23371139-23371239)
chr1 (113-164)||(31442434-31442484)
chr1 (132-203)||(50760288-50760359)
chr1 (132-214)||(35019244-35019326)
chr1 (87-204)||(45402118-45402235)
chr1 (88-160)||(15505632-15505702)
chr1 (87-148)||(16542653-16542714)
chr1 (138-207)||(18335356-18335425)
chr1 (131-207)||(8197064-8197140)
chr1 (91-186)||(34148983-34149076)
[»] chr8 (45 HSPs)
chr8 (87-204)||(35261680-35261795)
chr8 (87-207)||(39461013-39461133)
chr8 (114-204)||(6760823-6760913)
chr8 (87-204)||(28817645-28817760)
chr8 (87-204)||(36720797-36720912)
chr8 (87-204)||(44530150-44530265)
chr8 (131-207)||(18164821-18164896)
chr8 (111-187)||(20869941-20870017)
chr8 (113-204)||(26954133-26954225)
chr8 (115-206)||(389642-389733)
chr8 (113-204)||(7136572-7136663)
chr8 (88-199)||(5135309-5135418)
chr8 (113-207)||(12670295-12670385)
chr8 (89-204)||(13160703-13160815)
chr8 (87-207)||(44781523-44781643)
chr8 (87-207)||(20284088-20284210)
chr8 (113-211)||(45071259-45071354)
chr8 (87-193)||(17250894-17251000)
chr8 (87-204)||(29521704-29521819)
chr8 (87-207)||(21070716-21070839)
chr8 (113-174)||(43942355-43942416)
chr8 (114-211)||(44742564-44742660)
chr8 (87-206)||(17823575-17823692)
chr8 (108-207)||(42083738-42083836)
chr8 (132-214)||(22598148-22598230)
chr8 (138-211)||(14018037-14018110)
chr8 (108-193)||(25250534-25250619)
chr8 (132-207)||(20869560-20869633)
chr8 (113-207)||(30454142-30454232)
chr8 (87-204)||(8897783-8897898)
chr8 (113-207)||(11748297-11748391)
chr8 (91-188)||(29877111-29877206)
chr8 (133-207)||(35105921-35105995)
chr8 (132-193)||(8484000-8484061)
chr8 (113-174)||(16225050-16225111)
chr8 (131-206)||(2626518-2626596)
chr8 (144-211)||(30962847-30962914)
chr8 (87-203)||(12625891-12626006)
chr8 (150-204)||(28407417-28407470)
chr8 (113-207)||(23000264-23000353)
chr8 (131-207)||(36918122-36918198)
chr8 (88-201)||(24365079-24365191)
chr8 (87-193)||(40604925-40605028)
chr8 (90-207)||(31457171-31457285)
chr8 (87-174)||(5689662-5689747)
[»] chr4 (57 HSPs)
chr4 (87-207)||(37494849-37494967)
chr4 (131-211)||(39077857-39077935)
chr4 (113-204)||(21646965-21647056)
chr4 (89-206)||(47443956-47444071)
chr4 (89-204)||(5648260-5648372)
chr4 (113-207)||(5306709-5306800)
chr4 (113-204)||(16408646-16408737)
chr4 (87-212)||(14983827-14983950)
chr4 (87-205)||(16911562-16911680)
chr4 (87-207)||(6430645-6430762)
chr4 (87-188)||(20639677-20639777)
chr4 (88-207)||(25463120-25463237)
chr4 (89-204)||(40915830-40915942)
chr4 (87-207)||(44363149-44363269)
chr4 (113-207)||(48598870-48598960)
chr4 (97-187)||(7909310-7909397)
chr4 (113-207)||(17043439-17043531)
chr4 (132-207)||(19027846-19027921)
chr4 (87-174)||(23501818-23501905)
chr4 (113-207)||(54175061-54175154)
chr4 (113-203)||(25343189-25343279)
chr4 (87-207)||(30639378-30639495)
chr4 (113-207)||(9832358-9832448)
chr4 (113-207)||(20224982-20225072)
chr4 (88-196)||(21489096-21489203)
chr4 (113-207)||(47528575-47528665)
chr4 (88-207)||(54967019-54967135)
chr4 (131-207)||(11054209-11054283)
chr4 (87-207)||(35567168-35567286)
chr4 (113-207)||(29207943-29208033)
chr4 (87-185)||(25629069-25629165)
chr4 (87-205)||(30581484-30581602)
chr4 (108-174)||(13256439-13256505)
chr4 (87-193)||(20908655-20908760)
chr4 (131-207)||(7385537-7385613)
chr4 (131-207)||(41018855-41018930)
chr4 (113-207)||(49938638-49938727)
chr4 (120-207)||(487186-487272)
chr4 (86-193)||(10660416-10660522)
chr4 (86-193)||(10874561-10874667)
chr4 (87-205)||(54730249-54730368)
chr4 (113-194)||(9987879-9987958)
chr4 (138-207)||(14590835-14590905)
chr4 (145-207)||(42164224-42164285)
chr4 (88-193)||(36589755-36589859)
chr4 (89-185)||(49796818-49796911)
chr4 (131-207)||(47441591-47441667)
chr4 (87-174)||(51865057-51865142)
chr4 (113-160)||(20225119-20225166)
chr4 (113-164)||(20405128-20405179)
chr4 (87-206)||(30352599-30352727)
chr4 (108-175)||(48327803-48327870)
chr4 (133-195)||(51420584-51420646)
chr4 (150-207)||(43035246-43035303)
chr4 (121-193)||(39029113-39029184)
chr4 (166-214)||(41549373-41549421)
chr4 (178-214)||(50856344-50856380)
[»] scaffold0057 (3 HSPs)
scaffold0057 (87-204)||(46832-46947)
scaffold0057 (87-174)||(24791-24876)
scaffold0057 (86-158)||(46725-46796)
[»] scaffold0254 (1 HSPs)
scaffold0254 (113-207)||(4155-4250)
[»] scaffold0168 (1 HSPs)
scaffold0168 (113-207)||(30577-30667)
[»] scaffold0187 (2 HSPs)
scaffold0187 (90-207)||(10072-10185)
scaffold0187 (90-207)||(20400-20513)
[»] scaffold0311 (1 HSPs)
scaffold0311 (87-204)||(10811-10926)
[»] scaffold0036 (1 HSPs)
scaffold0036 (131-204)||(35078-35152)
[»] scaffold0258 (1 HSPs)
scaffold0258 (113-207)||(13069-13160)
[»] scaffold0005 (1 HSPs)
scaffold0005 (138-207)||(226473-226543)
[»] scaffold0223 (1 HSPs)
scaffold0223 (131-207)||(11129-11203)
[»] scaffold0167 (1 HSPs)
scaffold0167 (113-207)||(23597-23689)
[»] scaffold1176 (1 HSPs)
scaffold1176 (87-207)||(1606-1722)
[»] scaffold0015 (1 HSPs)
scaffold0015 (113-193)||(48679-48755)


Alignment Details
Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 18 - 428
Target Start/End: Complemental strand, 35203626 - 35203215
Alignment:
Q  18 aaattgagatttgaaattaccatatgccaaatttagaaatttgagcaccgttactattgtagttatcgttaaagctcctgcatacgtagagttctggaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  35203626 aaattgagatttgaaattaccatatgccaaatttagaaatttgagcaccattactattgtagttatcgttaaagctcccgcatacgtagagttcaggaag 35203527  T
Q  118 ggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatcatgtatg 217  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35203526 ggatcccaccatttttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttcaatcatgtatg 35203427  T
Q  218 attgaggttctggttgtaggcattaaactatatttggtggtt-ggtttttgaaactactattattgcatggttatgttgttttcttttactagtagatta 316  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35203426 attgaggttctggttgtaggcattaaactatatttggtggttagttttttgaaactactattattgcatggttatgttgttttcttttactagtagatta 35203327  T
Q  317 caaatcctagatgagcttaatcttgttcataaaatatttctgttttcaatgaacttttgctcttcaggcactgcctaccatcagttggcattatagtgag 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  35203326 caaatcctagatgagcttaatcttgttcataaaatatttctgttttcaatgaacttttgctcttcaagcactgcataccatcagttggcattatagtgag 35203227  T
Q  417 gagatattgtct 428  Q
    ||||||||||||    
T  35203226 gagatattgtct 35203215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 46354286 - 46354188
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||| |||||||||| ||||||    
T  46354286 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccaatca 46354188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 43557589 - 43557470
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| ||||||| ||||| | ||| ||| |||||||||| ||||| ||||||||||| |||||| |||||||| |||||||||  |||||||||||    
T  43557589 aaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccagga 43557490  T
Q  188 cttgaatccgtgacctttca 207  Q
    |||||| || ||||||||||    
T  43557489 cttgaacccatgacctttca 43557470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 47716551 - 47716460
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  47716551 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 47716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 7879752 - 7879639
Alignment:
Q  89 aagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggac 188  Q
    ||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||| ||||||| |||||||||| ||||||||||||    
T  7879752 aagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggac 7879655  T
Q  189 ttgaatccgtgacctt 204  Q
    ||||| ||||||||||    
T  7879654 ttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 42805616 - 42805525
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||| ||||| |||||||| || ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  42805616 ggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 42805525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 27629724 - 27629633
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttc 206  Q
    ||||||| |||||||||||  ||| |||| |||||||||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||||    
T  27629724 ggaaggggtcccaccattt--ggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 27629633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 3469220 - 3469316
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctg--tttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||| ||||||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||| ||||||||| || |||||||||||    
T  3469220 ggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgttttttttacacaagagaatgtttctaggacttgagtctgtgacctttca 3469316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 11617607 - 11617725
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||| ||||||||||| || || | ||||||| |||||||||||  ||| |||||||||||  |||||||||||||| |||||||||  ||||||||||    
T  11617607 taaaggtcctgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccagg 11617704  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| | |||||||||||    
T  11617705 acttgaacctgtgacctttca 11617725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 34626227 - 34626348
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | |||||||||||||||||||  ||| ||||| ||||| ||||||||||||||| ||||| |||  ||||||||||    
T  34626227 taaagctcccgcatacgcagggtccgggaagggatcccaccattt--ggtgtattgaacgcagccttaccctgttttt-acacaggaggctgtttccagg 34626323  T
Q  187 acttgaatccgtgacctttcaatca 211  Q
    ||||||||| ||| |||||||||||    
T  34626324 acttgaatctgtggcctttcaatca 34626348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 2541038 - 2541155
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || |  | ||||||| |||||||||||  ||| ||| ||||||| ||||||||||||||| |||||||||  ||||||||||    
T  2541038 taaagctcccgcatacgcagggaccgggaaggggtcccaccattt--ggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccagg 2541135  T
Q  187 acttgaatccgtgacctttc 206  Q
    ||||||| ||||||||||||    
T  2541136 acttgaacccgtgacctttc 2541155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 7645047 - 7644954
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||| ||||| ||| |||||||||| | |||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||    
T  7645047 ggaaggggtcccacaatttt-ggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 7644954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 12473380 - 12473302
Alignment:
Q  129 tttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||  ||||| ||||||||||| || ||||||||||    
T  12473380 tttttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttca 12473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 22699021 - 22699107
Alignment:
Q  121 tcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||||||||||| |||||||||||  |||||||||||||| |||||||||| | ||||||||||||||| || | ||||||||    
T  22699021 tcccaccatttttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttgaacccataacctttca 22699107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 38262215 - 38262330
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || |||| ||||||| ||||| |||||  ||| ||||||| ||||| ||||| | ||||| |||||||||| ||||||||||    
T  38262215 taaagctcccgcatacgcagtgttcgggaaggggtcccatcattt--ggtgtattgtatgcaacattaccatattttttacacaagagactgtttccagg 38262312  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  38262313 acttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 21172054 - 21172144
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  21172054 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 21172144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 47077877 - 47077990
Alignment:
Q  90 agctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggact 189  Q
    |||||| ||||| |||| |||  ||||||| ||||||||||||  || ||||||||||||| |||| || ||||  |||||||||| |||||||||||||    
T  47077877 agctcccgcatatgtagggtttgggaaggggtcccaccatttt--gtgtattgtacgcaactttactctatttt--acacaagagactgtttccaggact 47077972  T
Q  190 tgaatccgtgacctttca 207  Q
    |||| |||||||||||||    
T  47077973 tgaacccgtgacctttca 47077990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 42476961 - 42476873
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgaccttt 205  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||| ||||||  |||||||||| ||||||||| |||||||||||||||||||    
T  42476961 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccttgtttt--acacaagagactgtttccagaacttgaatccgtgaccttt 42476873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 5180173 - 5180294
Alignment:
Q  86 ttaaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    |||||||||||||||||||||  ||  | ||||| ||| | |||||||||| | |||||| ||  ||||||||||||||||||||||||  |||||||||    
T  5180173 ttaaagctcctgcatacgtaggatttggaaaggggtccaatcatttttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgtttccag 5180272  T
Q  186 gacttgaatccgtgacctttca 207  Q
     | ||||| || ||||||||||    
T  5180273 aagttgaacccttgacctttca 5180294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 42798743 - 42798670
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||||| ||||||||||| ||||||| ||||||| |||||||||| |||||||| |||||||| ||||||||||    
T  42798743 tttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgacctt 42798670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 10693118 - 10693208
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||| ||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  10693118 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctctttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 10693208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 14099030 - 14099143
Alignment:
Q  92 ctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttg 191  Q
    ||||||||||||||| |||| ||||||| |||||||||||  ||| |||||||||||  |||| ||||||||| |||||| ||  | ||||||||||||     
T  14099030 ctcctgcatacgtagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttc 14099127  T
Q  192 aatccgtgacctttca 207  Q
    || || ||||||||||    
T  14099128 aacccatgacctttca 14099143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 14409047 - 14409160
Alignment:
Q  92 ctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttg 191  Q
    ||||||||||||||| |||| ||||||| |||||||||||  ||| |||||||||||  |||| ||||||||| |||||| ||  | ||||||||||||     
T  14409047 ctcctgcatacgtagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttc 14409144  T
Q  192 aatccgtgacctttca 207  Q
    || || ||||||||||    
T  14409145 aacccatgacctttca 14409160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 42391145 - 42391235
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  ||||||||   ||||||||||||||||| |||||||||||||    
T  42391145 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaagctgtttccaggacttgaacccgtgacctttca 42391235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 18512473 - 18512588
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| ||||||| || || | ||||||| ||||||||||   ||| ||||||||||| ||||||||| ||||| ||||||||   |||||||||||    
T  18512473 aaagctcccgcatacgcagggtccgggaaggggtcccaccattc--ggtgtattgtacgcagccttaccctattttt-acacaagatgttgtttccagga 18512569  T
Q  188 cttgaatccgtgacctttc 206  Q
    |||||| ||||||||||||    
T  18512570 cttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 19426950 - 19427025
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttc 206  Q
    |||||| |||||||||||  |||||||| ||||| |||||||||  ||||||||||||||||| ||||||||||||    
T  19426950 tttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaacccgtgacctttc 19427025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 33871955 - 33872046
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||| ||||||||| |||||||||  ||||||||||||||||| ||| |||||||||    
T  33871955 ggaaggggtcccaccattt--ggtgtattgtacgcagccttatcctgttttt-acacaagaggttgtttccaggacttgaacccgcgacctttca 33872046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 16341353 - 16341275
Alignment:
Q  130 ttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaa 208  Q
    ||||||| ||||||||| | ||||||||||||||| |||||||||  |||||| || ||||||| ||||||||||||||    
T  16341353 ttttggtgtattgtacgtagccttaccctgttttttacacaagaggctgtttctagaacttgaacccgtgacctttcaa 16341275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 23419719 - 23419809
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgaccttt 205  Q
    ||||||| |||||||||||  ||| |||||||||||  |||||||||||||| |||||||||  ||||||||| ||||||| | |||||||||    
T  23419719 ggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgaccttt 23419809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 32758349 - 32758259
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| |||||||| || ||||||||||||||  |||||||||  ||||||||||||||||| | |||||||||||    
T  32758349 ggaaggggtcccaccattt--ggtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaacctgtgacctttca 32758259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 35334835 - 35334948
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||||||||||| || || | ||||||| ||||||||  || ||| |||||||| ||  |||||||||||||| ||||  |||| ||||||||||    
T  35334835 taaagctcctgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacacagtcttaccctgttttttacac--gagactgtttccagg 35334930  T
Q  187 acttgaatccgtgacctt 204  Q
    |||||||  |||||||||    
T  35334931 acttgaactcgtgacctt 35334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 18747603 - 18747484
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctg-tttttgacacaagagaatgtttccag 185  Q
    ||||||||| ||||||| || |||| ||||||| |||||||| ||  ||| |||| |||||| |||||||||| ||||| |||||| ||  ||||||||     
T  18747603 taaagctcccgcatacgcagggttcaggaaggggtcccaccaatt--ggtgtattatacgcagccttaccctgcttttttacacaaaaggctgtttccaa 18747506  T
Q  186 gacttgaatccgtgacctttca 207  Q
    |||||||  |||||||||||||    
T  18747505 gacttgatcccgtgacctttca 18747484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 29907502 - 29907417
Alignment:
Q  121 tcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||||||| ||| ||||| ||||| |||||| || ||||| |||||||||  |||||| |||||||||| |||||||||||||    
T  29907502 tcccaccatttt-ggtgtattgaacgcagccttacactattttttacacaagaggctgtttctaggacttgaacccgtgacctttca 29907417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 1423967 - 1424044
Alignment:
Q  127 catttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||| ||||| || |||| ||| | ||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||    
T  1423967 cattattggtgtagtgtatgcagcattaccctgttttttacacaacagactgtttccaggatttgaatccgtgacctt 1424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 48735167 - 48735258
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttcc-aggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||| ||||||  |||||||||  ||||||| |||||||||| |||||||||||||    
T  48735167 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccgtgtttt--acacaagaggttgtttccaaggacttgaacccgtgacctttca 48735258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 31591154 - 31591244
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||||||||||| | ||||  |||||||| |||||| |||||||  |||||||||  |||||||||||||||||  ||||||||||||    
T  31591154 ggaaggggtcccaccatttattgtat--tgtacgcagccttactctgtttt--acacaagaggttgtttccaggacttgaactcgtgacctttca 31591244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 19265904 - 19265813
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||| ||||| ||||||| |  ||| |||| |||||||| |||||||||||||    
T  19265904 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctcttttt-acacaagcggctgtatccaagacttgaacccgtgacctttca 19265813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 207
Target Start/End: Complemental strand, 19266564 - 19266448
Alignment:
Q  89 aagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggac 188  Q
    ||||||| ||||||| || || | |||||||||||||| ||||  ||| ||||||||||| ||||||||||||||| || |||| |  | ||| ||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaattt--ggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggac 19266467  T
Q  189 ttgaatccgtgacctttca 207  Q
    ||||| ||  |||||||||    
T  19266466 ttgaacccacgacctttca 19266448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 28362190 - 28362282
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| |||||||  |||||| |||||||||   ||||| |||||||||| | |||||||||||    
T  28362190 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgtgacctttca 28362282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 32233180 - 32233271
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||||||||  ||| || | |||||  ||||||||||||||| |||||||||  ||||||||||||||||| || ||||||||||    
T  32233180 ggaaggaatcccaccattt--ggtgtaatatacgctgccttaccctgttttt-acacaagaggttgtttccaggacttgaacccatgacctttca 32233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 199
Target Start/End: Complemental strand, 39124010 - 39123896
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaacct----taccctgtttttgacacaagagaatgtttcc 183  Q
    ||||||||  |||||| || || | ||||||| |||||||||||||||| |||| |||||| |||    |||||||||||| ||||||||||  |||||     
T  39124010 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttct 39123912  T
Q  184 aggacttgaatccgtg 199  Q
    |||||||||| |||||    
T  39123911 aggacttgaacccgtg 39123896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 42495916 - 42495977
Alignment:
Q  150 ccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatcat 212  Q
    ||||||||||||||| | |||||||  ||||||||||||||||| ||||||||||||| ||||    
T  42495916 ccttaccctgttttt-atacaagaggctgtttccaggacttgaacccgtgacctttcagtcat 42495977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 186
Target Start/End: Complemental strand, 38604643 - 38604546
Alignment:
Q  86 ttaaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    |||||||||| ||||||| || || | | ||||| || ||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  38604643 ttaaagctcccgcatacgcagggtccggaaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccag 38604547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 48123531 - 48123621
Alignment:
Q  115 aagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| |||||||||||  ||| ||||||| |||   |||||||||| || |||||||||  ||||||||||||||||| || ||||||||||    
T  48123531 aaggggtcccaccattt--ggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttca 48123621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 1408565 - 1408468
Alignment:
Q  95 ctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaat 194  Q
    ||||||||| || || | ||||||| |||||||||||  | | |||||||| || ||||||| ||||||| |||||||||  | ||||||||||||||||    
T  1408565 ctgcatacgcagggtccgggaaggggtcccaccattt--gctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaat 1408468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 11741883 - 11741793
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||||||||||||||  ||| ||||||||||| ||||||||| ||||  |||| |||   ||||| ||||||||||| || ||||||||||    
T  11741883 ggaagggatcccaccattt--ggtgtattgtacgcagccttaccctatttt--acactagaagctgttttcaggacttgaacccatgacctttca 11741793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 28078177 - 28078265
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||||  ||| ||||| | |||||||||||||||||||   ||| |||| |||||| |||||||||| ||||||||||    
T  28078177 ggaaggggtcccaccattt--ggtgtattgcatgcaaccttaccctgttttt-ttacacgagactgtttctaggacttgaacccgtgacctt 28078265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 2662996 - 2663056
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    |||||| ||||||||||| ||||||||| ||||  |||||||||  |||||||||||||||||    
T  2662996 tttggtgtattgtacgcagccttaccctatttt--acacaagaggctgtttccaggacttgaa 2663056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 14732877 - 14732959
Alignment:
Q  124 caccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||||||| ||||| ||||| ||||||||||||||| |||   |||  ||||||||||||||||| || |||| |||||    
T  14732877 caccatttttggtgtattg-acgcagccttaccctgttttttacatgggaggctgtttccaggacttgaacccatgacttttca 14732959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 8148990 - 8149069
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccct-gtttttgacacaagagaatgtttccaggacttgaa 193  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||  ||||| |||||||||   |||| |||||||||||    
T  8148990 ggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaa 8149069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 21566552 - 21566447
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||| | || |||| ||||||| ||| |||||||| ||| |||||||||||  ||| | |||||||| |||||||||   ||||||| |    
T  21566552 taaagctcccgcatatgcagggttcgggaaggggtcctaccatttt-ggtgtattgtacgcagtcttcctctgttttttacacaagaggcggtttccaag 21566454  T
Q  187 acttgaa 193  Q
    |||||||    
T  21566453 acttgaa 21566447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 23753876 - 23753814
Alignment:
Q  135 gtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccg 197  Q
    |||||| |||||||||||||| ||||  || |||||||||| |||||||| || |||||||||    
T  23753876 gtatatagtacgcaaccttactctgtcctttacacaagagattgtttccaagatttgaatccg 23753814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 15108442 - 15108519
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    |||||||||||||| ||||  | | |||||||| || ||||||| ||||||| |||||||| | |||||||||||||||||    
T  15108442 ggaagggatcccactattt--gatgtattgtacacagccttaccttgttttt-acacaagaaactgtttccaggacttgaa 15108519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 9e-34; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 27328871 - 27328750
Alignment:
Q  86 ttaaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    |||||||||| ||||||| || |||| ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  27328871 ttaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccag 27328772  T
Q  186 gacttgaatccgtgacctttca 207  Q
    |||||||| | |||||||||||    
T  27328771 gacttgaacctgtgacctttca 27328750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 38879699 - 38879579
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| | |||||||  ||||||||||    
T  38879699 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccagg 38879600  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  38879599 acttgaacccgtgacctttca 38879579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 43574722 - 43574609
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||||||||||||||| ||||||||||||||  |||||||||| ||||||||||    
T  43574722 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtatattgtacgcagccttaccctgttttctacacaagagattgtttccagg 43574625  T
Q  187 acttgaatccgtgacc 202  Q
    |||||||  |||||||    
T  43574624 acttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 4619149 - 4619240
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||  | ||||||||||||||| ||||||||||    
T  4619149 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgacctt 4619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 43334295 - 43334200
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgt-ttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||| |||| ||||| |||  ||||||||||||||||| |||||||||||||    
T  43334295 ggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaacccgtgacctttca 43334200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 24449006 - 24448891
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||||||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||||| ||||| |||||| ||  ||||||||||    
T  24449006 taaagctcctgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccagg 24448909  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  24448908 acttgaacccgtgacctt 24448891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 42924877 - 42924971
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||||||   ||||| |||||||||||  ||||||||||||    
T  42924877 ggaagggattccatcatttttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttca 42924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 13801812 - 13801892
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||  || ||||||||||||||    
T  13801812 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgcttccaggacttgaa 13801892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 32703512 - 32703422
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  32703512 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 32703422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 41014408 - 41014320
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  41014408 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgacctt 41014320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 28516452 - 28516571
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    |||||||||||||| || || ||   |||| || |||||||||||| | | ||||||||||| || || ||||||||| ||||||||| ||||||||| |    
T  28516452 taaagctcctgcatgcgcagggtctgggaatgggtcccaccatttt-gatgtattgtacgcagccctagcctgttttttacacaagaggatgtttccaag 28516550  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  28516551 acttgaacccgtgacctttca 28516571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 8170029 - 8170118
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttc 206  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||| ||  ||||||||||||||||| ||||||||||||    
T  8170029 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaaaaggctgtttccaggacttgaacccgtgacctttc 8170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 20135696 - 20135623
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||| ||||||| |||||||||  ||||||||||    
T  20135696 ggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 204
Target Start/End: Complemental strand, 22600569 - 22600455
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| ||||||| ||  | | |||||||||||||||||||  ||| |||||||| || ||||||||||| ||| |||||| | | |||||||||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccattt--ggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccagga 22600472  T
Q  188 cttgaatccgtgacctt 204  Q
    |||||| |||| |||||    
T  22600471 cttgaacccgtaacctt 22600455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 7097779 - 7097863
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    ||||||||| ||||||| || |||| ||||||| || ||||||||  ||| ||||||||||||||||||||||||||| |||||||||    
T  7097779 taaagctcccgcatacgcagggttcgggaaggggtctcaccattt--ggtgtattgtacgcaaccttaccctgttttt-acacaagag 7097863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 22187403 - 22187283
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||||||||| |||| |||  ||||||| || ||   |||||||| |||||||||||  |||| | ||||||| |||||||||  ||||||||||    
T  22187403 taaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccagg 22187304  T
Q  187 acttgaatccgtgacctttca 207  Q
    |||| || | |||||||||||    
T  22187303 acttaaaccggtgacctttca 22187283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 35710401 - 35710311
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||| ||||| ||||||||| ||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  35710401 ggaaggggtcccaccattt--ggtgtattgaacgcagccttaccctatttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 35710311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 37024626 - 37024691
Alignment:
Q  140 ttgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  37024626 ttgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 37024691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 39301214 - 39301121
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||||||| ||||||||  ||| |||||| ||||||||||||||  |||||||||  |||| ||| |||||||| |||||||||||||    
T  39301214 ggaaggggtcccacc-tttttggtgcattatacgcatccttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgacctttca 39301121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 19142988 - 19143065
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    ||||||| |||||||||||  ||| || |||||||| ||||||||||||||| |||||||||  |||||||||||||||||    
T  19142988 ggaaggggtcccaccattt--ggtgtactgtacgcagccttaccctgttttt-acacaagaggttgtttccaggacttgaa 19143065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 22025598 - 22025541
Alignment:
Q  150 ccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||||||||| |||||||||  ||||||||||||||||| || ||||||||||    
T  22025598 ccttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttca 22025541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 12575680 - 12575779
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgttt-ttgacacaagagaatgtttccagg 186  Q
    |||||||||||||||| || || | ||||||| |||||||| ||||||| ||||||||||||| ||| ||||||| || || ||||||  ||||||||||    
T  12575680 aaagctcctgcatacgcagggtccaggaaggggtcccacca-ttttggtgtattgtacgcaactttagcctgtttatttacgcaagaggctgtttccagg 12575778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 1405300 - 1405188
Alignment:
Q  90 agctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggact 189  Q
    |||||| ||||| | || |||| |||| || |||||||||||  ||| |||||||||||| ||||| || ||||| | | |||||  |||||||||||||    
T  1405300 agctcccgcatatgcagggttcaggaaagggtcccaccattt--ggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggact 1405203  T
Q  190 tgaatccgtgacctt 204  Q
    |||| ||||||||||    
T  1405202 tgaacccgtgacctt 1405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 23974840 - 23974781
Alignment:
Q  145 cgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||| ||||||||| ||||| |||||||||  ||||||||||||||||| ||||||||||    
T  23974840 cgcagccttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgacctt 23974781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 34074623 - 34074706
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatcatgt 214  Q
    |||||| ||||| ||||||||||||  ||||||| |||||||||  |||||| ||||||||||   ||||||||||| ||||||    
T  34074623 tttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgt 34074706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 208946 - 209050
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    |||||||| |||||||  || || | ||||||| |||||||||||| ||| ||||| | ||| ||||||||||||||| |||||||||  |||| |||||    
T  208946 taaagctcttgcatacccagggtccaggaaggggtcccaccatttt-ggtgtattgaatgcagccttaccctgttttt-acacaagaggttgttgccagg 209043  T
Q  187 acttgaa 193  Q
    |||||||    
T  209044 acttgaa 209050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 2838867 - 2838811
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaaga 173  Q
    ||||||||||||||||||  ||| ||||||||||| ||||||||||||||| ||||||||    
T  2838867 gaagggatcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaaga 2838811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 4810076 - 4810000
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatcatgt 214  Q
    ||||||| |||  |||| ||| |||||||||||||||| |||||| ||||||||||||| ||| |||| | ||||||    
T  4810076 tattgtatgcagtcttaacctatttttgacacaagagattgtttcaaggacttgaatccatgatcttttactcatgt 4810000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 7368469 - 7368413
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggactt 190  Q
    ||||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||    
T  7368469 ttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 16880708 - 16880751
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||    
T  16880708 tttggtgtattgtacgcagccttaccctgttttttacacaagag 16880751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 1850706 - 1850638
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||||| |||||  |||||||| |||||||||  | ||||| ||||||||| |||||||||||||    
T  1850706 tattgtacgcacccttattctgttttt-acacaagaggttatttccgggacttgaacccgtgacctttca 1850638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 22861762 - 22861803
Alignment:
Q  166 acacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||||| || ||| ||||||||||||||||||||||||    
T  22861762 acacaagagactgcttctaggacttgaatccgtgacctttca 22861803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 41426021 - 41425952
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgac 201  Q
    ||||| ||||||| ||| ||||||||||||||| |||||| |   ||||||||| ||||||| |||||||    
T  41426021 ttggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccgtgac 41425952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 29334467 - 29334415
Alignment:
Q  133 tggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    |||| ||||||||||| ||||||| ||||||| |||||||||  |||||||||    
T  29334467 tggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccag 29334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 86 - 207
Target Start/End: Original strand, 8247705 - 8247826
Alignment:
Q  86 ttaaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    |||||||||| ||||||| || || | ||||||  |||||||||| ||||| ||||||||||||||||||||||||||| |||||||||  |||||||||    
T  8247705 ttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccag 8247804  T
Q  186 gacttgaatccgtgacctttca 207  Q
    |||||||| |||||||||||||    
T  8247805 gacttgaacccgtgacctttca 8247826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 46421053 - 46421172
Alignment:
Q  86 ttaaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    |||||||||| ||||||| || || | ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  46421053 ttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccag 46421152  T
Q  186 gacttgaatccgtgaccttt 205  Q
    |||||||| |||||||||||    
T  46421153 gacttgaacccgtgaccttt 46421172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 13628809 - 13628929
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||| ||||| ||||||||||| ||||||||||||| | |||||||||  ||||||||||    
T  13628809 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccagg 13628908  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  13628909 acttgaacccgtgacctttca 13628929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 10795444 - 10795554
Alignment:
Q  89 aagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggac 188  Q
    ||||||| ||||||| || || | ||||||| |||||||||||||||| ||||||||||| ||||||||||| ||| |||||||||  ||||||||||||    
T  10795444 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggac 10795543  T
Q  189 ttgaatccgtg 199  Q
    ||||| |||||    
T  10795544 ttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 29366739 - 29366857
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    |||||||||  |||||| || || | ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| | |||||||  ||||||||||    
T  29366739 taaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccagg 29366838  T
Q  187 acttgaatccgtgaccttt 205  Q
    ||||||| |||||||||||    
T  29366839 acttgaacccgtgaccttt 29366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 13730647 - 13730738
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||| ||||| |||||||| || ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  13730647 ggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 13730738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 34420688 - 34420781
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||| ||| ||| ||||||| ||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||    
T  34420688 ggaaggggtcccaccatttt-ggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 34420781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 40272831 - 40272946
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||    
T  40272831 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccagg 40272928  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| || |||||||    
T  40272929 acttgaacccatgacctt 40272946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 516550 - 516429
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccattttt-ggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    ||||||||| ||||||| || ||   ||||||| |||| |||||||| ||| |||||| |||| ||||||||||||||| |||||||||  |||||||||    
T  516550 taaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttacacaagaggctgtttccag 516451  T
Q  186 gacttgaatccgtgacctttca 207  Q
    |||||||| |||||||||||||    
T  516450 gacttgaacccgtgacctttca 516429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 45139521 - 45139615
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||||| ||||||| ||| ||||||||||| ||| |||||||||  ||||||||  ||||||| |||||||||||||    
T  45139521 ggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttca 45139615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 19731091 - 19731018
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    ||||||||||||||||||| ||||||| |||||||||  | ||||||||||||| |||||||||||||||||||    
T  19731091 tattgtacgcaaccttaccttgttttttacacaagaggctatttccaggacttgcatccgtgacctttcaatca 19731018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 5173738 - 5173857
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| |  || | |||||||  ||||||||||||||| ||||| | ||||||||||  ||||||| |||||||||  ||||||||||    
T  5173738 taaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttgttttt-acacaagaggttgtttccagg 5173836  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  5173837 acttgaacccgtgacctttca 5173857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 14987063 - 14986991
Alignment:
Q  121 tcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||    
T  14987063 tcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaa 14986991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 22122962 - 22123052
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||| ||||||||||||||||| ||| |||||||||    
T  22122962 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagagactgtttccaggacttgaacccgcgacctttca 22123052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 7696948 - 7697020
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgaccttt 205  Q
    |||||| ||||||||||| ||||||||||||||  |||||||||| ||||||||||||||||| |||||||||||    
T  7696948 tttggtgtattgtacgcagccttaccctgtttt--acacaagagactgtttccaggacttgaacccgtgaccttt 7697020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 26573222 - 26573147
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| ||||||||||| ||||||||||||||| ||||| |||  ||||||||||||||||| |||||||||||||    
T  26573222 ttggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgacctttca 26573147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 45786233 - 45786320
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    ||||||||| |||| || || || | ||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  45786233 taaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagag 45786320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 53996610 - 53996703
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||| ||| ||||||| ||| ||||||||||||||| |||||||||  |||||||| ||||||||  ||||||||||||    
T  53996610 ggaaggggtcccaccatttt-ggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacctttca 53996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 1217184 - 1217110
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  1217184 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 1217110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 19751667 - 19751594
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    ||||||||||||||||||| || |||| |||||||||  | ||||||||||||| |||||||||||||||||||    
T  19751667 tattgtacgcaaccttaccttgatttttacacaagaggctatttccaggacttgcatccgtgacctttcaatca 19751594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 39203626 - 39203536
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||||||||||||||||||  |||||||||  |||||| |||||||||| | |||||||||||    
T  39203626 ggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctgtttt--acacaagaggctgtttcaaggacttgaacctgtgacctttca 39203536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 54374364 - 54374483
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||| | || || | ||||||| |||||||||||| |||  |||||||||| ||||||||| ||||| |||||||||  |||||||| |    
T  54374364 taaagctcccgcatatgcagggtccgggaaggggtcccaccatttt-ggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaag 54374462  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| | |||||||||||    
T  54374463 acttgaacctgtgacctttca 54374483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 30928209 - 30928284
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| |||| ||| |||||||||| ||||||| |||||||||  ||||||||||||||||| |||||||||||||    
T  30928209 ttggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 30928284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 49013518 - 49013589
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttcca 184  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||  ||||||||    
T  49013518 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcca 49013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 204
Target Start/End: Complemental strand, 7943100 - 7943013
Alignment:
Q  115 aagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||||||||||||||||  | | |||||||||||  |||||||||||||| | ||||||   ||||||||||||||||||||||||||||    
T  7943100 aagggatcccaccattt--gatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaatccgtgacctt 7943013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 9607317 - 9607223
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||||| |||| ||||| |||| |||||| ||||||||||||||| || ||||||  ||||||||||||||||| |  ||||||||||    
T  9607317 ggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgacctttca 9607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 26782441 - 26782383
Alignment:
Q  152 ttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatc 210  Q
    ||||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||||    
T  26782441 ttaccctattttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatc 26782383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 54032627 - 54032693
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| ||| ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  54032627 tattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 26869816 - 26869727
Alignment:
Q  115 aagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||| ||||  ||||||||||||||||| | |||||||||||    
T  26869816 aaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acaccagaggctgtttccaggacttgaacctgtgacctttca 26869727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 10870025 - 10870088
Alignment:
Q  143 tacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||    
T  10870025 tacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgacctttca 10870088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 22609877 - 22609789
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  |||||||| |||||||| |||| |||||    
T  22609877 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaagacttgaacccgttacctt 22609789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 45620890 - 45620966
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttg-acacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| ||||||||||| |||||||||||||||  |||||||||  ||||||||| ||||||| |||||||||||||    
T  45620890 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttca 45620966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 12914096 - 12914171
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttc 206  Q
    |||||| ||||||||||  ||||||||||||||| |||||||||  |||||||||||||||||   ||||||||||    
T  12914096 tttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttc 12914171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 829461 - 829566
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||||||||||| || |||| ||||||| |||||||| ||||||| ||||||||||||| ||||  |||| || | |||||||  |||||| ||     
T  829461 taaagctcctgcatacgcagggttcgggaaggggtcccacca-ttttggtgtattgtacgcaactttactatgttctttagacaagaggttgtttctaga 829559  T
Q  187 acttgaa 193  Q
    |||||||    
T  829560 acttgaa 829566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 33926195 - 33926103
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||| | ||| |||||||| || ||||||||||||||| |||||||||  | ||||||||||||||| || ||||||||||    
T  33926195 ggaaggggtcccaccattat-ggtgtattgtacacagccttaccctgttttt-acacaagaggctatttccaggacttgaacccatgacctttca 33926103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 45948857 - 45948972
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || |  |||||| |||||||| ||  ||| ||||||| ||| ||||||||| ||||| |||||||||  ||||||||||    
T  45948857 taaagctcccgcatacgcagggtccgagaaggggtcccaccaatt--ggtgtattgtatgcagccttaccctattttttacacaagaggttgtttccagg 45948954  T
Q  187 acttgaatccgtgacctt 204  Q
    | ||||| ||||||||||    
T  45948955 aattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 4495725 - 4495798
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||||| ||||||||||| ||||||||||||||| |||||| ||  | ||| ||||||||||| ||||||||||    
T  4495725 tttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgacctt 4495798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 353394 - 353450
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacac 169  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  353394 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacac 353450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 31592943 - 31592878
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgt 198  Q
    |||||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| ||||    
T  31592943 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 25944582 - 25944489
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||| ||| |||||||| || |||| ||| |||||| |||| ||||   |||||||||||||||| || ||||||||||    
T  25944582 ggaaggggtcccaccatttt-ggtgtattgtactcagccttgcccagttttttacacgagaggcggtttccaggacttgaacccatgacctttca 25944489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 53062112 - 53062058
Alignment:
Q  153 taccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||||||||||||| |||  |||||||||||||||||  ||||||||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttca 53062058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 54484829 - 54484730
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctg-tttttgacacaagagaatgtttccag 185  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||| || ||||| |||||||||  |||||||||    
T  54484829 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccttgtttttttacacaagaggctgtttccag 54484732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 16735552 - 16735467
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgac 201  Q
    ||||||| |||||||||||  ||| ||||||||||| |||||||||||||||   |||||||  |||||| |||||||||| |||||||    
T  16735552 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-ctacaagaggctgtttcgaggacttgaacccgtgac 16735467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 52428538 - 52428615
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag-gacttgaatccgtgacctttca 207  Q
    |||||| ||||||||||| ||||||||||| ||| |||||||||  || |||||| ||||| || |||||||||||||    
T  52428538 tttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgacctttca 52428615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 6411883 - 6411954
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacct 203  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||  ||||| || |||||||| || ||||||    
T  6411883 tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttacaagacttgaacccatgacct 6411954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 12525511 - 12525422
Alignment:
Q  121 tcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatcat 212  Q
    |||||||||||||||| || |   |||| |||||||||| |||| |||||||||  ||||||||||||| ||| | ||||||||||| ||||    
T  12525511 tcccaccatttttggtgtactt--cgcagccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttcagtcat 12525422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 9276360 - 9276317
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||    
T  9276360 tttggtgtattgtacgcagccttaccctgttttttacacaagag 9276317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 55401288 - 55401210
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    |||||| |||||||||||| ||| |||| ||||||  |||| ||||||||| |||||||||  ||||| |||||||||||    
T  55401288 gaaggggtcccaccatttt-ggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggacttgaa 55401210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 47624153 - 47624095
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||    
T  47624153 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagag 47624095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 39212079 - 39212010
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||||||  |||||| |||| || |||||||||  | ||||||||||||||| ||||||| |||||    
T  39212079 tattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttca 39212010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 8e-31; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 10543816 - 10543696
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||   |||||||||    
T  10543816 taaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccagg 10543717  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  10543716 acttgaacccgtgacctttca 10543696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 24200668 - 24200762
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||| ||||||| |||||    
T  24200668 ggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacttttca 24200762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 14530436 - 14530316
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||| ||||| ||||||||| | ||||||||||||||| | |||||||  ||||||||||    
T  14530436 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttatacaagaggctgtttccagg 14530337  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  14530336 acttgaacccgtgacctttca 14530316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 19615109 - 19614990
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||||||||||| || |||| ||||||| ||| || ||| |||||||||||||||||  |||||||||||||| | ||||||| ||||||| |||    
T  19615109 taaagctcctgcatacgcagggttcgggaaggggtcc-actattattggtatattgtacgcagtcttaccctgttttttatacaagaggatgtttcaagg 19615011  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  19615010 acttgaacccgtgacctttca 19614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 8455335 - 8455450
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||||||| ||| |||||||||  ||||||||||    
T  8455335 taaagctccggcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccagg 8455432  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  8455433 acttgaacccgtgacctt 8455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 10546279 - 10546160
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttg-acacaagagaatgtttccag 185  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| |||||||||||||||  | ||||||| ||||||||||    
T  10546279 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccag 10546182  T
Q  186 gacttgaatccgtgacctttca 207  Q
    |||||||| |||||||||||||    
T  10546181 gacttgaacccgtgacctttca 10546160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 25249757 - 25249871
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||  ||||||| || |||| ||||||||||||||||  |||||| ||||||||||| ||||||||||||| | |||||||||| |||||||| |    
T  25249757 taaagctcacgcatacgcagggttcgggaagggatcccacca--tttggtgtattgtacgcagccttaccctgtttgt-acacaagagactgtttccatg 25249853  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  25249854 acttgaacccgtgacctt 25249871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 7214625 - 7214532
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||| |||||||||| || ||||||||||| ||||||||||| ||| |||||||||| |||||||| |||||||| || ||||||||||    
T  7214625 gaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttca 7214532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 12023980 - 12024055
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||    
T  12023980 tttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgacctttca 12024055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 19977733 - 19977850
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||  |  |||| |||||||||||||||||||  ||| ||||||||||||||||| ||| ||||| ||| |||||  |||||||||     
T  19977733 taaagctcccgcatacacaaggttcgggaagggatcccaccattt--ggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccaga 19977830  T
Q  187 acttgaatccgtgacctttc 206  Q
    ||||||| ||||||||||||    
T  19977831 acttgaacccgtgacctttc 19977850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 21779306 - 21779396
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||||||||||||||||||  |||||||||  ||| ||||||||||||| |||||||||||||    
T  21779306 ggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctgtttt--acacaagaggctgtctccaggacttgaacccgtgacctttca 21779396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 14444844 - 14444730
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||| |||| || ||||||||||||||| |||||||||  ||||||||||    
T  14444844 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtatcgtacacagccttaccctgttttt-acacaagaggctgtttccagg 14444748  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  14444747 acttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 206
Target Start/End: Complemental strand, 17896349 - 17896258
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttg-acacaagagaatgtttccaggacttgaatccgtgacctttc 206  Q
    |||||| |||||||||||  ||||||||||||||| ||||||||| |||||  |||||||||  |||||| |||||||||||||||||||||||    
T  17896349 gaaggggtcccaccattt--ggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaatccgtgacctttc 17896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 9671295 - 9671180
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||    
T  9671295 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccagg 9671200  T
Q  187 acttgaatccgtgacctttc 206  Q
    | ||||| ||||||| ||||    
T  9671199 atttgaacccgtgacatttc 9671180  T

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Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 5841120 - 5841029
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||| ||| | ||||||||||| ||||||||| ||||| |||||| ||  |||||| |||||||||| ||||||||||    
T  5841120 ggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgacctt 5841029  T

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Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 33795350 - 33795279
Alignment:
Q  140 ttgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    ||||||||| ||||||||||||||| || ||||||  ||||||| ||||||||| |||||||||||||||||    
T  33795350 ttgtacgcagccttaccctgttttttacccaagaggttgtttccgggacttgaacccgtgacctttcaatca 33795279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 17623638 - 17623565
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||||| ||||||||||| |||||||||| |||| |||||||||  |||||| |||||||||| ||||||||||    
T  17623638 tttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgacctt 17623565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 17668076 - 17668003
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||||| ||||||||||| |||||||||| |||| |||||||||  | ||||||||||||||| ||||||||||    
T  17668076 tttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgacctt 17668003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 21377093 - 21377210
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    ||||||||  |||||| || |||| ||||||| |||||||||||  |||  ||||||| || ||||||||||||||| ||||||||| ||||||| | ||    
T  21377093 aaagctcccacatacgcagggttcgggaaggggtcccaccattt--ggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatga 21377190  T
Q  188 cttgaatccgtgacctttca 207  Q
    ||||||  ||| ||||||||    
T  21377191 cttgaactcgtaacctttca 21377210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 31158458 - 31158578
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || ||   ||||||| |||||||||||||||| ||||||| |||| |||||||||||||| || ||||||  |||||  | |    
T  31158458 taaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgttttgaag 31158557  T
Q  187 acttgaatccgtgacctttca 207  Q
    |||| || || ||||||||||    
T  31158558 actttaacccttgacctttca 31158578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 15296452 - 15296530
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||| ||| |||||| ||  ||||||| |||||||||    
T  15296452 gaagggatcccactatttt-ggtatattgtacgcagccttaccctgtattttacacaacaggctgtttccgggacttgaa 15296530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 23145760 - 23145835
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| ||||||||||| |||||| |||||||| |||||||||  ||||| || |||||||| |||||||||||||    
T  23145760 ttggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23145835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 23557550 - 23557625
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| ||||||||||| |||||| |||||||| |||||||||  ||||| || |||||||| |||||||||||||    
T  23557550 ttggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23557625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 29419970 - 29420033
Alignment:
Q  151 cttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatcatgt 214  Q
    |||||||||||||| |||||||||  |||||||||||||||||  |||||||||||| ||||||    
T  29419970 cttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgt 29420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 32781333 - 32781425
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| |||||||||||  |||||||||||||| |||||||||  |||||||  ||||||||  ||||||||||||    
T  32781333 ggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagacttgaactcgtgacctttca 32781425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 11514551 - 11514437
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || ||   ||||||| |||||||||||  ||| ||||||||||| ||||||  ||||||| |||||||||  ||||||||||    
T  11514551 taaagctcccgcatacgcagggtctgggaaggg-tcccaccattt--ggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccagg 11514455  T
Q  187 acttgaatccgtgacctt 204  Q
    | ||||| ||||||||||    
T  11514454 agttgaacccgtgacctt 11514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 5450360 - 5450283
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttg-acacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||||||| ||||||| |||||||  |||||||||  ||||||||||| ||||| |||||||||||||    
T  5450360 tttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttca 5450283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 22371144 - 22371059
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacct 203  Q
    ||||||| |||||||||||  ||| ||||||||||| |||||||||||||||   ||| |||  ||||||||||||||||| |||||||||    
T  22371144 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt---acacgaggctgtttccaggacttgaacccgtgacct 22371059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 25641617 - 25641500
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||  ||||||| ||  ||| ||||||| |||||| ||||  ||| ||||||||||||| ||||||||||||  |||||| |   ||||||||||    
T  25641617 taaagctctcgcatacgcaggattcgggaaggggtcccacaattt--ggtgtattgtacgcaactttaccctgttttc-acacaaaatgctgtttccagg 25641521  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  25641520 acttgaacccgtgacctttca 25641500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 25632625 - 25632544
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacaca 170  Q
    ||||||||| |||||||||  |||| |||||| |||||||||  |||||| ||||||||||| ||||| ||||||||| |||||    
T  25632625 taaagctcccgcatacgtaaggttcgggaaggaatcccacca--tttggtgtattgtacgcagccttatcctgttttttacaca 25632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 17380298 - 17380372
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttc 206  Q
    |||||| ||||| || |||||||||||||||| | |||||||||  |||||||| |||||||| ||||||||||||    
T  17380298 tttggtgtattgcacacaaccttaccctgtttat-acacaagaggttgtttccaagacttgaacccgtgacctttc 17380372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 23397853 - 23397764
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| |||||||||||  ||| ||||||||| | ||||||||| ||||  |||||||||  ||||||||||||||||| || ||||||||||    
T  23397853 gaaggggtcccaccattt--ggtgtattgtacgtagccttaccctatttt--acacaagaggctgtttccaggacttgaacccatgacctttca 23397764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 25079736 - 25079852
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctg-tttttgacacaagagaatgtttccag 185  Q
    |||||||| |||||||| || || | ||||||| ||||||||||   ||| ||||||||||| ||||||| || ||||| |||||||||  |||||| |     
T  25079736 taaagctcttgcatacgcagggtccgggaaggggtcccaccattc--ggtgtattgtacgcatccttaccttgtttttttacacaagaggttgtttctaa 25079833  T
Q  186 gacttgaatccgtgacctt 204  Q
    |||||||| ||||||||||    
T  25079834 gacttgaacccgtgacctt 25079852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 36871607 - 36871509
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| |||||||||| |||| |||||||||  ||||||||||    
T  36871607 taaagctcccgcatacgcag-gtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctg-ttttcacacaagaggctgtttccagg 36871512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 2003604 - 2003681
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttg-acacaagagaatgtttccaggacttgaatccgtgacctttcaatcatgt 214  Q
    ||||||||||| |||||||||||||||  || |||| |  ||||||||||||||| | ||||||||||||| ||||||    
T  2003604 tattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtgacctttcagtcatgt 2003681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 44521434 - 44521510
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| |||| || ||| ||||||| ||||||| |||||||||| |||||||| || |||||  ||||||||||||    
T  44521434 tttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttca 44521510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 4516413 - 4516488
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| ||||||||||| | || |||||||||| |||||||||  |||||| || ||||||||  |||||||||||    
T  4516413 ttggtgtattgtacgcagcgttgccctgttttttacacaagaggctgtttctagaacttgaatatgtgacctttca 4516488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 17705567 - 17705496
Alignment:
Q  133 tggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||| |||||||| || |||||| ||||| || |||||||||   |||||||||||||||| ||||||||||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgacctt 17705496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 30826110 - 30826052
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggactt 190  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||  |||||||| |||||    
T  30826110 tttggtgtattgtacgcaaccttaccctattttt-acacaagaggctgtttccaagactt 30826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 30864478 - 30864536
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggactt 190  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||  |||||||| |||||    
T  30864478 tttggtatattgtacgcacccttaccctattttt-acacaagaggctgtttccatgactt 30864536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 39914325 - 39914440
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctg-tttttgacacaagagaatgtttccag 185  Q
    ||||||||| ||||||| || || | ||||||| ||||||||||   ||| |||||||| || |||||||||| ||||| |||||||||  |||||||||    
T  39914325 taaagctcccgcatacgcagggt-caggaaggggtcccaccattc--ggtgtattgtacacatccttaccctgtttttttacacaagaggttgtttccag 39914421  T
Q  186 gacttgaatccgtgacctt 204  Q
     ||||||  ||||||||||    
T  39914422 tacttgatcccgtgacctt 39914440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 99326 - 99400
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||||||| |||| || ||||||| |||  ||||  |||||| |||||||||| |||||||||||||    
T  99326 tttggtgtattgtacgcagccttgccatgttttttaca--agaggctgtttctaggacttgaacccgtgacctttca 99400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 44604907 - 44604855
Alignment:
Q  151 cttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||||||||||||| |||||||||  ||||||||||||||||| | ||||||||    
T  44604907 cttaccctgttttt-acacaagaggttgtttccaggacttgaacctgtgacctt 44604855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 26684638 - 26684763
Alignment:
Q  86 ttaaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccct-gtttttgacacaaga-gaatgtttcc 183  Q
    |||||||||| ||||||| || |||| ||||| | ||||||||  ||| |||||||||||||| ||||||| |  ||||| |||||||| |  ||||| |    
T  26684638 ttaaagctcccgcatacgcagggttcgggaagaggtcccacca--tttagtatattgtacgcagccttaccatatttttttacacaagaggtctgttttc 26684735  T
Q  184 aggacttgaatccgtgacctttcaatca 211  Q
    ||||||| || |  ||||||||||||||    
T  26684736 aggacttaaacctttgacctttcaatca 26684763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 59095 - 58975
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| |||||   ||||||| |||||||||||||||| |||||||||||  |||||||||||||| | |||||||  ||||||||||    
T  59095 taaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgtttccagg 58996  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  58995 acttgaacccgtgacctttca 58975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 29355874 - 29355994
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||| ||||| ||||||||||| ||||||||||||| | |||||||||  ||||||||||    
T  29355874 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccagg 29355973  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  29355974 acttgaacccgtgacctttca 29355994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 12221935 - 12222054
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| ||||||| || || | ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||  |||||||| ||    
T  12221935 aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaaga 12222034  T
Q  188 cttgaatccgtgacctttca 207  Q
    |||||| |||||||||||||    
T  12222035 cttgaacccgtgacctttca 12222054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 2166455 - 2166549
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||| ||||| ||||||||||||||||| ||||| ||| |||||||||  ||||||||||||||||| |||||||||||||    
T  2166455 ggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttca 2166549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 2178088 - 2178182
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||| ||||| ||||||||||||||||| ||||| ||| |||||||||  ||||||||||||||||| |||||||||||||    
T  2178088 ggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttca 2178182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 8409310 - 8409241
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||||| ||||||||||||||| |||||||||   ||||||||||||||||||||||||||||||    
T  8409310 tattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttca 8409241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 9161213 - 9161121
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| |||||||||| ||| | ||||||||||| |||||| |||||||| |||||||||  ||||||||||||||||| | |||||||||||    
T  9161213 gaaggggtcccaccattattgatgtattgtacgcagccttactctgttttt-acacaagaggctgtttccaggacttgaacctgtgacctttca 9161121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 1347052 - 1346962
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  ||||||| |  ||||||||||||||||| |||||||||||||    
T  1347052 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagtggctgtttccaggacttgaacccgtgacctttca 1346962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 1354802 - 1354892
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| | |||||||||||    
T  1354802 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaaccagtgacctttca 1354892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 18277212 - 18277328
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| |||||||||||||   ||||||| |||||||||||  ||| |  ||||| ||||||||||||| |||| |||||||||  |||||||| |    
T  18277212 taaagctcccgcatacgtagagtctaggaaggggtcccaccattt--ggtgttctgtactcaaccttaccctgatttttacacaagaggctgtttccaag 18277309  T
Q  187 acttgaatccgtgaccttt 205  Q
    | ||||| |||||||||||    
T  18277310 atttgaacccgtgaccttt 18277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 23240843 - 23240959
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| |  || || |||||| |||||||| ||  |||||||||||||||| |||||||||||||  |||||||||  ||||||||||    
T  23240843 taaagctcccgcatacgcattgtcctagaaggggtcccaccaatt--ggtatattgtacgcaaacttaccctgtttt--acacaagaggctgtttccagg 23240938  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||| | | |||||||||||    
T  23240939 acttgcacctgtgacctttca 23240959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 11849159 - 11849065
Alignment:
Q  98 catacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    |||||| ||||||| ||||||| |||||||| ||||||| ||||||  ||||| ||| ||||||||| |||||||||  ||||||| |||||||||    
T  11849159 catacgcagagttcgggaaggggtcccacca-ttttggtgtattgtgggcaactttatcctgtttttaacacaagaggttgtttcctggacttgaa 11849065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 6024317 - 6024227
Alignment:
Q  121 tcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    ||||| |||| ||||| |||||||||||  |||||| ||||||| |||||||||  |||||| |||| ||||| |||||||||| ||||||    
T  6024317 tcccatcattattggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatca 6024227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 7947416 - 7947509
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||  ||||||||||| ||| ||||||||||| |||||||||| |||| ||||| |||  ||||||||||| ||||| | |||||||||||    
T  7947416 ggaagggggcccaccatttt-ggtgtattgtacgcagccttaccctggtttttacacaggaggttgtttccaggagttgaaccggtgacctttca 7947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 3815096 - 3815214
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||| | |||||||||| |||| |||| || |||||||||||  ||| |||||||||||  | |||| | ||||| |||||| ||  ||||||||||    
T  3815096 taaagcttccgcatacgtagggttcgggaaagggtcccaccattt--ggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccagg 3815193  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| ||||||| |||||    
T  3815194 acttgaacccgtgacatttca 3815214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 32728217 - 32728293
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||||||||| ||  |||||||||||||| ||| |||||  ||||||||  ||||||||| |||||||||||    
T  32728217 tttggtatattgtacacagtcttaccctgttttttacataagaggttgtttccaaaacttgaatctgtgacctttca 32728293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 14553602 - 14553511
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgaccttt 205  Q
    |||||| |||||||| ||||||| |||| ||| || ||||||||| ||||| ||||||||   | ||||||||||||||| | |||||||||    
T  14553602 gaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggacttgaacctgtgaccttt 14553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 24734734 - 24734683
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgttttt 164  Q
    ||||||| ||||||| |||||| | |||||||||||||||||||||||||||    
T  24734734 ggaaggggtcccaccttttttgttgtattgtacgcaaccttaccctgttttt 24734683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 28007700 - 28007628
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgaccttt 205  Q
    |||||| ||||||||||| ||| ||||||||||  |||||||||  | ||||||||||||||| |||||||||||    
T  28007700 tttggtgtattgtacgcagcctgaccctgtttt--acacaagaggctctttccaggacttgaacccgtgaccttt 28007628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 1941922 - 1941856
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||||||| ||||||||||||||| |||||||||  ||||| || ||||| |||||| ||||||    
T  1941922 tattgtacgcagccttaccctgttttttacacaagaggttgtttacatgacttcaatccgcgacctt 1941856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 14975168 - 14975214
Alignment:
Q  158 tgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||    
T  14975168 tgttttttacacaagaggctgtttccaggacttgaatccgtgacctt 14975214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 20400731 - 20400665
Alignment:
Q  141 tgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||  |||||||||||||| |||||||||| ||||||||  ||||||| | |||||||||||    
T  20400731 tgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttca 20400665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 17432395 - 17432338
Alignment:
Q  150 ccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||||||||| ||||||||   ||||||||||||||||| | |||||||||||    
T  17432395 ccttaccctgttttttacacaagatgttgtttccaggacttgaacctgtgacctttca 17432338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 33138907 - 33138838
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtga 200  Q
    |||||| ||||||||||  |||||| |||||||| | |||||||  ||||||||||||||||| ||||||    
T  33138907 tttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 2755475 - 2755547
Alignment:
Q  121 tcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    |||||||||||||||| ||||||||||| ||||| ||| ||||||  | ||||| |||||| || ||||||||    
T  2755475 tcccaccatttttggtgtattgtacgcagccttagcctatttttggtataagaggatgtttgcaagacttgaa 2755547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 13905048 - 13905116
Alignment:
Q  139 attgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||| ||||||||||||||| |||||||||   |||| ||||||||||  |||||||||||||    
T  13905048 attgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttca 13905116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 17448389 - 17448318
Alignment:
Q  140 ttgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    ||||||||| ||||||||||||||| |||||| |   ||||| ||  ||||||| |||||||||||||||||    
T  17448389 ttgtacgcagccttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtgacctttcaatca 17448318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 12889493 - 12889424
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||| |||| |||||||||| |||||||||  ||||| || |||||||| | |||||||||||    
T  12889493 tattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttca 12889424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 25557797 - 25557743
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||| ||||||||||| ||||||||||||||  |||||||||  |||||||||||    
T  25557797 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 26097232 - 26097178
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||| ||||||||||| ||||||||||||||  |||||||||  |||||||||||    
T  26097232 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 4136568 - 4136648
Alignment:
Q  121 tcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgac 201  Q
    |||||||| |||| || || | |||||||||||||||||| ||| ||||||||   |||||  |||||||||| |||||||    
T  4136568 tcccaccaattttagtgtactctacgcaaccttaccctgtattttacacaagatgttgtttttaggacttgaacccgtgac 4136648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 15866110 - 15866178
Alignment:
Q  143 tacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    |||||| | ||||||||||||| ||  |||||  ||||||||||| ||||| || ||||||||||||||    
T  15866110 tacgcagctttaccctgttttttacttaagaggctgtttccaggaattgaacccatgacctttcaatca 15866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 10668366 - 10668246
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || |  | ||||||| |||||||||| ||||| ||||||||||||||||||| ||||||| |||||||||  ||||||||||    
T  10668366 taaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttacacaagaggctgtttccagg 10668267  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  10668266 acttgaacccgtgacctttca 10668246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 27201788 - 27201668
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| |  || | ||||||| |||||||||||||||| ||||||||||| ||||||||||||| |||||||||||  ||||||||||    
T  27201788 taaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccagg 27201689  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| || ||||||||||    
T  27201688 acttgaacccatgacctttca 27201668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 18944783 - 18944664
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| ||||||| || || | ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||     
T  18944783 aaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggc 18944684  T
Q  188 cttgaatccgtgacctttca 207  Q
    |||||| | |||||||||||    
T  18944683 cttgaacctgtgacctttca 18944664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 30395771 - 30395862
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  30395771 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 35005264 - 35005144
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    |||||| || ||||||| || || | ||||||| |||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||  ||||| || |    
T  35005264 taaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttttcaag 35005165  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  35005164 acttgaacccgtgacctttca 35005144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 14617177 - 14617059
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||| | || || | |||||||||||||||||||  ||| ||||||||||||||||||| |||| || |||||||||  ||||||||||    
T  14617177 taaagctcccgcatatgcagggtccgggaagggatcccaccattt--ggtgtattgtacgcaaccttaccttgttatttacacaagaggctgtttccagg 14617080  T
Q  187 acttgaatccgtgacctttca 207  Q
    |||||||  ||||||||||||    
T  14617079 acttgaactcgtgacctttca 14617059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 35117784 - 35117905
Alignment:
Q  87 taaagctcctgcat-acgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    |||||||||||||| ||| || || | ||||||| ||||| |||||||||| |||||||| || ||||||||||| ||| |||||||||  | |||||||    
T  35117784 taaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccag 35117883  T
Q  186 gacttgaatccgtgacctttca 207  Q
    |||||||| |||||||||||||    
T  35117884 gacttgaacccgtgacctttca 35117905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 25468324 - 25468404
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    |||||| |||||||||||||||||||||| |||| |||||||||  ||||||||||||||||| || ||||||||||||||    
T  25468324 tttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacctttcaatca 25468404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 32632602 - 32632698
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatcat 212  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  32632602 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcat 32632698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 47214622 - 47214532
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||||||||||||||||||  | |||||||| ||||||||||||||||| |||||||||||||    
T  47214622 ggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctgtttt--aaacaagagactgtttccaggacttgaacccgtgacctttca 47214532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 20004135 - 20004226
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||| ||||||| |||| ||||  ||||||||||||||||| ||||||||||    
T  20004135 ggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacgagaggctgtttccaggacttgaacccgtgacctt 20004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 46247972 - 46248090
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| |||||||||||  |||||||||||||| |||||||||  |||||||| |    
T  46247972 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaag 46248069  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| ||||||| |||||    
T  46248070 acttgaacccgtgacatttca 46248090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 18724606 - 18724682
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| |||||||| || ||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||    
T  18724606 tttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 18724682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 41319867 - 41319943
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||||| || | |||||||||||    
T  41319867 tttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttca 41319943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 9939568 - 9939482
Alignment:
Q  121 tcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||||||||||| ||||| ||||||||||||| ||||| | | |||||||  |||||||||||||||||  ||||||||||||    
T  9939568 tcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggttgtttccaggacttgaactcgtgacctttca 9939482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 33223089 - 33223005
Alignment:
Q  121 tcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||||||| ||| |||||||||||||||| |||||||||| |||||||||  |||||||| ||||| ||||||||||||||||    
T  33223089 tcccaccatttt-ggtgtattgtacgcaacctttccctgttttt-acacaagaggctgtttccatgacttaaatccgtgacctttca 33223005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 46991943 - 46991828
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    |||||||||  |||||| || || | ||||||| ||||||||||   ||| |||||||| || ||||||||||||||| |||||||||  ||||||||||    
T  46991943 taaagctcccacatacgcagggtccgggaaggggtcccaccattc--ggtgtattgtacacagccttaccctgttttttacacaagaggttgtttccagg 46991846  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  46991845 acttgaacccgtgacctt 46991828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 2435833 - 2435924
Alignment:
Q  115 aagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| |||||||||||| ||| |||||||||||  |||||||| ||||| ||||| |||  ||||||||||||||||| |||||||||||||    
T  2435833 aaggggtcccaccatttt-ggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgacctttca 2435924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 11596650 - 11596534
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| ||||||| || || | ||||||| |||||||||||  ||| |||| |||||| ||||||||||||||| |||||||||  |||||| ||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattatacgcagccttaccctgttttt-acacaagaggttgtttctagga 11596554  T
Q  188 cttgaatccgtgacctttca 207  Q
    |||||| ||||||| |||||    
T  11596553 cttgaacccgtgacatttca 11596534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 24564433 - 24564361
Alignment:
Q  139 attgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    |||||||||| ||||||||||||||| |||||||||  |||||||| |||||||||| | |||||||||||||    
T  24564433 attgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttcaatca 24564361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 34725143 - 34725233
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||   || ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  34725143 ggaaggggtcccaccattta--gtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 34725233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 19932781 - 19932856
Alignment:
Q  96 tgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaa 171  Q
    |||||||| || || | ||||||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  19932781 tgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaa 19932856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 42304226 - 42304305
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttga 166  Q
    |||||||||  |||||| || || | ||||||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  42304226 taaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgtttttga 42304305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 23768339 - 23768454
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || ||   ||||||  |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  |||||||| |    
T  23768339 taaagctcccgcatacgcagggtctgggaaggtgtcccaccattt--ggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatg 23768436  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| | ||||||||    
T  23768437 acttgaacctgtgacctt 23768454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 27136696 - 27136793
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||  |||| |||| |||||||  |||| |||| ||||||    
T  27136696 ggaaggggtcccaccatttt-ggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcgtgtccttccaatca 27136793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 50812038 - 50811960
Alignment:
Q  130 ttttggtatattgtacgcaaccttaccctgt-ttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||||   |||||||||||| ||| ||||||||||||||    
T  50812038 ttttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccaggacatgattccgtgacctttca 50811960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 17470406 - 17470483
Alignment:
Q  130 ttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||  |||||| |||||||||| || ||||| ||||    
T  17470406 ttttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattca 17470483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 38478343 - 38478417
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||||||| ||||||||||||||  |||||||||  |||||| |||||||||| |||||||||||||    
T  38478343 tttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttctaggacttgaacccgtgacctttca 38478417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 35253232 - 35253322
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  |||||| |||||||||| |||||| ||||||    
T  35253232 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttcgaggacttgaacccgtgatctttca 35253322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 211
Target Start/End: Original strand, 44485129 - 44485250
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| ||||||||||  | | ||||||| ||| |||||||  ||| ||||||||||| ||||||| ||| ||| ||||||| |  |||||||||||    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaaccattt--ggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccagga 44485226  T
Q  188 cttgaatccgtgacctttcaatca 211  Q
    ||  || |||||||||||||||||    
T  44485227 ctataacccgtgacctttcaatca 44485250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 18742002 - 18742053
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgttttt 164  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  18742002 ggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttt 18742053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 6925239 - 6925124
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || |  | ||||||| ||||||||||   ||| |||||| |||| ||||||||| ||||| |||||||||  | ||||||||    
T  6925239 taaagctcccgcatacgcagggaccgggaaggggtcccaccattc--ggtgtattgtccgcagccttaccctattttttacacaagaggctatttccagg 6925142  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  6925141 acttgaacccgtgacctt 6925124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 22324997 - 22324928
Alignment:
Q  123 ccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    |||||||||||||| ||||||| ||| ||||||||||||||| |||||||||  |||||||| ||||||||    
T  22324997 ccaccatttttggtgtattgtatgcagccttaccctgttttt-acacaagaggctgtttccaagacttgaa 22324928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 207
Target Start/End: Complemental strand, 20036355 - 20036241
Alignment:
Q  92 ctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgttt-ttgacacaagagaatgtttccaggactt 190  Q
    |||||||||||| || || | ||||||| | |||||||||  ||| ||||| |||||| |||||||| | | || |||||||||  ||||||||||||||    
T  20036355 ctcctgcatacgcagggtccgggaaggggttccaccattt--ggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggactt 20036258  T
Q  191 gaatccgtgacctttca 207  Q
    ||| |||||||||||||    
T  20036257 gaacccgtgacctttca 20036241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 22327177 - 22327120
Alignment:
Q  150 ccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||||||||| |||||||||  ||||||||||||||||| ||| |||||||||    
T  22327177 ccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttca 22327120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 27474419 - 27474302
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| ||||||||||    || ||||||||||| | || |||||||||| |||||||||| |||||||| |    
T  27474419 taaagctcccgcatacgcagggtccgggaaggggtcccaccattca--gtgtattgtacgcagctttgccctgttttt-acacaagagactgtttccaag 27474323  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| | |||||||||||    
T  27474322 acttgaacctgtgacctttca 27474302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 45264445 - 45264541
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    |||||| |||||||||||| ||| ||||| || || |||||| ||||||||  ||||||||  |||||||||||||||||   |||||||||||||||    
T  45264445 gaaggggtcccaccatttt-ggtgtattgcacacagccttactctgttttttgcacaagaggttgtttccaggacttgaacatgtgacctttcaatca 45264541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 19974093 - 19974211
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| |||||| |||||| | |||| || ||||| |||||| ||| |||||||||||||||| |||| ||||| ||||  |||  |||||||| |    
T  19974093 taaagctcccgcatacatagagtccgggaatgggtcccatcatttt-ggtgtattgtacgcaaccttgccctattttt-acacttgaggctgtttccaag 19974190  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||| ||||||    
T  19974191 acttgaacccgtgatctttca 19974211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 39215003 - 39215082
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    |||||||  ||||||||||| || |||||||||||| |||||||| |||||| |||||||||  ||||||||| |||||||    
T  39215003 ggaaggggacccaccatttt-ggaatattgtacgcagccttacccagttttttacacaagaggttgtttccagtacttgaa 39215082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 45812582 - 45812672
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||| ||| ||||||||| ||||  |||||||||| ||||| ||||||||||| | |||||||||||    
T  45812582 ggaaggggtcccaccattt--ggtgtattgtatgcagccttaccctctttt--acacaagagactgttttcaggacttgaacctgtgacctttca 45812672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 12126898 - 12126974
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaat 209  Q
    |||||| ||||||||||| ||||||||||||||  ||||||||   ||||||||| |||| || |||||||||||||||    
T  12126898 tttggtgtattgtacgcagccttaccctgtttt--acacaagaagctgtttccagaacttaaacccgtgacctttcaat 12126974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 22930114 - 22930204
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| |||||| | |||||||||||||||||| |||||| ||  ||||||||||||||||| || ||||||||||    
T  22930114 ggaaggggtcccaccattt--ggtgtattgt-cacaaccttaccctgttttt-acacaaaaggctgtttccaggacttgaacccatgacctttca 22930204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 4349777 - 4349702
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgttttt 164  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| |||||||||||||||    
T  4349777 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt 4349702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 31272446 - 31272511
Alignment:
Q  141 tgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||||| ||||||| ||||||| |||||||||  ||||||||||||||||| | |||||||||||    
T  31272446 tgtacgcagccttaccatgttttt-acacaagaggttgtttccaggacttgaacctgtgacctttca 31272511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 4430087 - 4430160
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||||| |||||||||||  |||||||||||||| |||||||| | ||||| || ||||| || ||||||||||    
T  4430087 tttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgacctt 4430160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 6983831 - 6983946
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    ||||||||||| |||| || || | | ||||| |||||||||||  ||| |||||||||||  |||||||||||||| | ||  |||  |||||||||||    
T  6983831 aaagctcctgcctacgcagggtccggaaaggggtcccaccattt--ggtgtattgtacgcatacttaccctgttttttatac--gaggctgtttccagga 6983926  T
Q  188 cttgaatccgtgacctttca 207  Q
    |||||| | |||||||||||    
T  6983927 cttgaacctgtgacctttca 6983946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 15511193 - 15511288
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgta--cgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| | |||||||||| ||| |||||||  |||| ||||||||||||||| |||||||||   ||||||||||||| |||  |||||||||||    
T  15511193 ggaaggggtaccaccatttt-ggtgtattgtatccgcagccttaccctgttttttacacaagaggcggtttccaggacttcaatatgtgacctttca 15511288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 19414550 - 19414455
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatcat 212  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||| ||||||||  ||| |||||  | |||| |||||||||| ||||||||||||| ||||    
T  19414550 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaacctgtttt--acataagaggctctttctaggacttgaacccgtgacctttcagtcat 19414455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 31382233 - 31382330
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||| | || || | ||||||| |||||||||||  ||| ||||||||||| ||||| ||||||||| |||||||||  ||||||||||    
T  31382233 taaagctcccgcatatgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcagccttatcctgttttt-acacaagaggctgtttccagg 31382329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 19701710 - 19701591
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | |||||||  ||||||| ||||||| |||||||| || |||||||  |||||| |||||||||  ||||| || |    
T  19701710 taaagctcccgcatacgcagggtccgggaaggggccccacca-ttttggtgtattgtacccatccttaccaagttttttacacaagaggctgttttcatg 19701612  T
Q  187 acttgaatccgtgacctttca 207  Q
    |||| || ||||||| |||||    
T  19701611 acttaaacccgtgacatttca 19701591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 21910682 - 21910743
Alignment:
Q  101 acgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgttttt 164  Q
    |||||| |||| ||||||| |||||||||||  ||| ||||||||||||||||||||| |||||    
T  21910682 acgtagggttcgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctattttt 21910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 23371239 - 23371139
Alignment:
Q  110 tctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaat 209  Q
    |||||||||| ||||| |||||  ||| |||||||| ||||||| ||| |||||| || |||| |  |||||| |||||||||| ||||||||||||| |    
T  23371239 tctggaaggggtcccagcattt--ggtgtattgtacacaaccttgccc-gttttttacccaagtggctgtttctaggacttgaacccgtgacctttcagt 23371143  T
Q  210 catg 213  Q
    ||||    
T  23371142 catg 23371139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 31442434 - 31442484
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgttttt 164  Q
    ||||||| |||||||||||| ||| ||||||||||| |||||||||||||||    
T  31442434 ggaaggggtcccaccatttt-ggtgtattgtacgcatccttaccctgttttt 31442484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 50760288 - 50760359
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacct 203  Q
    ||||| |||| |||||| |||||||| |||||  |||||||||  ||||| ||||||||||| |||||||||    
T  50760288 ttggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacct 50760359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 35019326 - 35019244
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatcatgt 214  Q
    ||||| ||||||| ||| |||||  ||| |||| | |||||||  ||||| ||||||||||||| ||||||||||| ||||||    
T  35019326 ttggtgtattgtatgcagccttatactgatttttatacaagaggttgtttacaggacttgaatctgtgacctttcagtcatgt 35019244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 45402235 - 45402118
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgca-acctt--accctgtttttgacacaagagaatgtttcc 183  Q
    ||||||||| ||||||| || ||   ||||||| |||||||||||  ||| ||||||||||| | |||  ||||||||||| |||||||||  |||||||    
T  45402235 taaagctcccgcatacgcagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagaacttgaaccctgttttt-acacaagaggctgtttcc 45402139  T
Q  184 aggacttgaatccgtgacctt 204  Q
    |||||||||| |||| |||||    
T  45402138 aggacttgaacccgttacctt 45402118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 15505702 - 15505632
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgt 160  Q
    |||||||| ||||||| || |||| ||||||| ||||||||  |||||| |||||||||||  ||||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 16542714 - 16542653
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgca 148  Q
    |||| |||||| ||||||||||||  |||||| ||| |||||||||| || |||||||||||    
T  16542714 taaaactcctggatacgtagagtttgggaaggaatctcaccatttttagtgtattgtacgca 16542653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 18335356 - 18335425
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||||||| |||||||  |||| | |||||||| |||||||||||||| ||   |||||||||||    
T  18335356 tattgtacgcaactttaccctaatttttaaacaagagactgtttccaggactttaacttgtgacctttca 18335425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 8197140 - 8197064
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| || |||||| | ||||||| ||||||| |||||||||    || |||||||||||| |||||||||||||    
T  8197140 tttggtgtactgtacgtagccttaccatgttttttacacaagaggcaattaccaggacttgaacccgtgacctttca 8197064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 34148983 - 34149076
Alignment:
Q  91 gctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||||| | || || | ||||||| || ||||||||  ||| | ||||||||||||||||||| ||||  |||||||||  ||||||||||    
T  34148983 gctcctgcatatgcagggtccaggaaggggtctcaccattt--ggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttccagg 34149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 35261795 - 35261680
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  35261795 taaagctcccgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagg 35261698  T
Q  187 acttgaatccgtgacctt 204  Q
     |||||| ||||||||||    
T  35261697 gcttgaacccgtgacctt 35261680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 39461013 - 39461133
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| || ||||||| ||||| ||||||||||| |||||| |||||||| |||||||||  ||||||||||    
T  39461013 taaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccagg 39461112  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  39461113 acttgaacccgtgacctttca 39461133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 6760913 - 6760823
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||||| |||||||||| ||||| ||||||||| | ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  6760913 gaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 6760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 28817645 - 28817760
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| ||||||||||   ||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||    
T  28817645 taaagctcccgcatacgcagggtccgggaaggggtcccaccattg--ggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccagg 28817742  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  28817743 acttgaacccgtgacctt 28817760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 36720912 - 36720797
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||| | ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||    
T  36720912 taaagcttccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccagg 36720815  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  36720814 acttgaacccgtgacctt 36720797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 44530265 - 44530150
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  |||||||| |    
T  44530265 taaagctcccgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaag 44530168  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  44530167 acttgaacccgtgacctt 44530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 18164821 - 18164896
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||    
T  18164821 tttggtgtattgtacgcaaccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgacctttca 18164896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 20870017 - 20869941
Alignment:
Q  111 ctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    ||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  20870017 ctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 26954225 - 26954133
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgt-ttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||| ||||| ||||||||||| ||||||||||| |||| |||||||||  ||||||||||||||||| ||||||||||    
T  26954225 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgacctt 26954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 389733 - 389642
Alignment:
Q  115 aagggatcccaccatttttggtatattgtacgcaaccttaccctgttttt--gacacaagagaatgtttccaggacttgaatccgtgacctttc 206  Q
    ||||||||||| |||||  ||| |||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||| ||||||||||||    
T  389733 aagggatcccatcattt--ggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 7136572 - 7136663
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||| ||||| ||||||||||| |||||||||| |||| |||||||||  ||||||||||||||||| || |||||||    
T  7136572 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgacctt 7136663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 88 - 199
Target Start/End: Original strand, 5135309 - 5135418
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||||||||||| || || | ||||||| |||||||||||  ||| |||||||| || ||||||||| ||||| |||||||||  |||||||||||    
T  5135309 aaagctcctgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacacagccttaccctcttttttacacaagaggctgtttccagga 5135406  T
Q  188 cttgaatccgtg 199  Q
    |||||| |||||    
T  5135407 cttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 12670295 - 12670385
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  12670295 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 12670385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 13160815 - 13160703
Alignment:
Q  89 aagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggac 188  Q
    ||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  |||||| |||||    
T  13160815 aagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttctaggac 13160719  T
Q  189 ttgaatccgtgacctt 204  Q
    ||||| ||||||||||    
T  13160718 ttgaacccgtgacctt 13160703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 44781523 - 44781643
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || ||   ||| ||| ||||| |||||||||| |||||||| || ||||||||||| ||| |||||||||  ||||||||||    
T  44781523 taaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttccagg 44781622  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||| ||||||    
T  44781623 acttgaacccgtgaactttca 44781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 20284088 - 20284210
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccc--tgtttttgacacaagagaatgtttcca 184  Q
    |||| |||| ||||||| || || | ||||||| |||||||||| ||||| ||||||||||| ||||||||  | ||||| | |||||||  ||||||||    
T  20284088 taaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagaggctgtttcca 20284187  T
Q  185 ggacttgaatccgtgacctttca 207  Q
    ||||||||| |||||||||||||    
T  20284188 ggacttgaacccgtgacctttca 20284210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 45071354 - 45071259
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  ||||||||| ||||||| |||||||||| ||||||    
T  45071354 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccagaacttgaacccgtgaccttacaatca 45071259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 17250894 - 17251000
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    |||||||||| |||||| || |||| |||| || |||||||||| ||||| ||||||||||  ||||| ||||||||| |||||||||  || |||||||    
T  17250894 taaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctgcttccagg 17250993  T
Q  187 acttgaa 193  Q
    |||||||    
T  17250994 acttgaa 17251000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 29521704 - 29521819
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || ||   ||| ||| |||||||||||  ||| ||||||||||| ||||||||||||||| | |||||||  ||||||||||    
T  29521704 taaagctcccgcatacgcagggtctgggatgggttcccaccattt--ggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccagg 29521801  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  29521802 acttgaacccgtgacctt 29521819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 21070716 - 21070839
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttg---acacaagagaatgtttcc 183  Q
    |||| |||| ||||||| || || | ||||||| |||||||||| ||||| ||||||||||| ||||||||| |||||    | |||||||  |||||||    
T  21070716 taaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagaggctgtttcc 21070815  T
Q  184 aggacttgaatccgtgacctttca 207  Q
    |||||||||| |||||||||||||    
T  21070816 aggacttgaacccgtgacctttca 21070839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 43942416 - 43942355
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  43942416 ggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttgacataagag 43942355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 211
Target Start/End: Original strand, 44742564 - 44742660
Alignment:
Q  114 gaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    |||||| |||||||||||| ||| ||||||||||| ||||||||||||||| ||||| |||| ||||||||| |||||||  | ||||||| ||||||    
T  44742564 gaaggggtcccaccatttt-ggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgaccttacaatca 44742660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 17823692 - 17823575
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||||||||| | || |||| ||||||| | |||||||||  ||| |||| ||||||  |||| |||| |||| |||||||||  ||||||||||    
T  17823692 taaagctcctgcatatgcagggttcgggaaggggttccaccattt--ggtgtattttacgcagtcttatcctggtttttacacaagaggctgtttccagg 17823595  T
Q  187 acttgaatccgtgacctttc 206  Q
    ||||||| ||||||||||||    
T  17823594 acttgaacccgtgacctttc 17823575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 42083738 - 42083836
Alignment:
Q  108 gttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||| ||||||| |||||||||||| |||||| |||||||| |||| |||  ||||| |||||| ||  ||||||||||||||||| |||||||||||||    
T  42083738 gttcgggaaggggtcccaccatttt-ggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctttca 42083836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 22598230 - 22598148
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatcatgt 214  Q
    ||||| ||||||||  | ||||||||||||||| |||||||||  ||||||||||| ||||| ||||||||||||| ||||||    
T  22598230 ttggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaacccgtgacctttcagtcatgt 22598148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 14018037 - 14018110
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    |||||||||||  || ||||||||||| |||||||||| |||||||| |||||||| || ||||||||||||||    
T  14018037 tattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttcaatca 14018110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 25250619 - 25250534
Alignment:
Q  108 gttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    |||| ||||||| |||||||||| ||||| ||||||||||| || |||||| ||||| |||||| ||  |||||||||||||||||    
T  25250619 gttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaa 25250534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 20869560 - 20869633
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| |||||||| || ||||||||||||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  20869560 ttggtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 20869633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 30454142 - 30454232
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||| ||||||| ||||||| ||||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  30454142 ggaaggggtcccaccattt--ggtgtatcgtacgcagccttaccttgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 30454232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 8897783 - 8897898
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||| | || || | ||||||| |||||||||||  ||| ||||||||| | ||||||||| ||||| ||||||| |  ||||||||||    
T  8897783 taaagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagg 8897880  T
Q  187 acttgaatccgtgacctt 204  Q
    |||| || ||||||||||    
T  8897881 acttcaacccgtgacctt 8897898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 11748391 - 11748297
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||| ||||||||| |||||||||||||   ||||||||| |||| ||| |||||  |||||||| |||||||| ||||||| |||||    
T  11748391 ggaaggggtcctaccattttttgtatattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttca 11748297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 29877206 - 29877111
Alignment:
Q  91 gctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggac 188  Q
    ||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||| ||  ||||||||||||    
T  29877206 gctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 35105995 - 35105921
Alignment:
Q  133 tggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||| ||||||||||| |||||| || | ||| |||||||||  ||||||||||||||||| |||||||||||||    
T  35105995 tggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttca 35105921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 8484000 - 8484061
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    ||||| ||||||||||| |||| |||||||||| |||||||||  |||||||||||||||||    
T  8484000 ttggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggacttgaa 8484061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 16225111 - 16225050
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    |||||||||||||||||| ||||| |||||||||||  |||||||||||||| ||| |||||    
T  16225111 ggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttacataagag 16225050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 2626596 - 2626518
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttg---acacaagagaatgtttccaggacttgaatccgtgacctttc 206  Q
    |||||| |||||||||||  ||||||||||||||    |||||||||  ||||||||||||||||| ||||||||||||    
T  2626596 tttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 2626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 30962847 - 30962914
Alignment:
Q  144 acgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    ||||| ||| ||||| ||||| |||||||||  |||||||||||||||||  ||||||||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatca 30962914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 203
Target Start/End: Complemental strand, 12626006 - 12625891
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttg-acacaagagaatgtttccag 185  Q
    ||||||||| ||||||| || || | ||| ||| |||||||||||  ||| ||||||| |||  ||||||||||||||  |||||||||  |||||||||    
T  12626006 taaagctcccgcatacgcagggtccgggagggggtcccaccattt--ggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccag 12625909  T
Q  186 gacttgaatccgtgacct 203  Q
    |||||||  |||||||||    
T  12625908 gacttgagcccgtgacct 12625891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 28407470 - 28407417
Alignment:
Q  150 ccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  28407470 ccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgacctt 28407417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 23000264 - 23000353
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||| | ||||||||| ||||||| |||||||||  ||||||||||||||  | |||||||||||||    
T  23000264 ggaaggggtcccaccattt--ggtgtattgtatggaaccttaccgtgttttt-acacaagaggctgtttccaggactt--acccgtgacctttca 23000353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 36918198 - 36918122
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| |||||||| || ||||||||||||||| ||| |||| | ||||||||| |||||||   |||||||||||    
T  36918198 tttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttca 36918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 24365079 - 24365191
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctg-tttttgacacaagagaatgtttccagg 186  Q
    ||||||||  |||||| || || | ||||||| ||||||||  |||||| |||||| |||| |||||||||| ||||| |||||||||  |||||| |||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccacca--tttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagg 24365176  T
Q  187 acttgaatccgtgac 201  Q
     |||||| |||||||    
T  24365177 gcttgaacccgtgac 24365191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 40604925 - 40605028
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| |||||||||| |||  ||||||||||| | |||||   || ||||||||||||||||| ||  ||||| |||||| ||| |||||||| |    
T  40604925 taaagctcccgcatacgtagggtttcggaagggatcc-atcattta--gtgtattgtacgcaaccttatccaattttttacacaaaagattgtttccatg 40605021  T
Q  187 acttgaa 193  Q
    |||||||    
T  40605022 acttgaa 40605028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 31457285 - 31457171
Alignment:
Q  90 agctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggact 189  Q
    |||||| ||||||| || |||  ||||||| ||| |||||||  | | ||||||||||| ||||  ||| ||||| |||||||||  ||||| |||||||    
T  31457285 agctcccgcatacgcagggtttgggaaggggtcctaccattt--gatgtattgtacgcagccttttcctattttt-acacaagaggttgtttacaggact 31457189  T
Q  190 tgaatccgtgacctttca 207  Q
    |||| |||||||||||||    
T  31457188 tgaacccgtgacctttca 31457171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 5689747 - 5689662
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    |||||||||  |||||| |  |||| ||||||| | |||||||||  ||| ||||||||||| |||||||||| |||| |||||||||    
T  5689747 taaagctcccacatacgcatggttcgggaaggggttccaccattt--ggtgtattgtacgcagccttaccctgctttttacacaagag 5689662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 37494967 - 37494849
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||||||||||| || || | | ||||| |||||||||||  ||||||||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  37494967 taaagctcctgcatacgcagggtcccgaaaggggtcccaccattt--ggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccagg 37494870  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| | |||||||||||    
T  37494869 acttgaacctgtgacctttca 37494849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 39077857 - 39077935
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttcaatca 211  Q
    |||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||| |||||||||||||||||    
T  39077857 tttggtatattgtacgcaaccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcaatca 39077935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 21647056 - 21646965
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||||| ||||| |||||||||  ||||||||||||||||| | ||||||||    
T  21647056 ggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaagaggctgtttccaggacttgaacctgtgacctt 21646965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 47444071 - 47443956
Alignment:
Q  89 aagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggac 188  Q
    ||||||||||||| | || || | ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| || ||||||  ||||||||||||    
T  47444071 aagctcctgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggac 47443974  T
Q  189 ttgaatccgtgacctttc 206  Q
    ||||| ||||||||||||    
T  47443973 ttgaacccgtgacctttc 47443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 5648372 - 5648260
Alignment:
Q  89 aagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggac 188  Q
    ||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  5648372 aagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggac 5648276  T
Q  189 ttgaatccgtgacctt 204  Q
    ||||| ||||||||||    
T  5648275 ttgaacccgtgacctt 5648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 5306709 - 5306800
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||| |||| |||||||||  ||||||||||||||||| |||||||||||||    
T  5306709 ggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctgatttt-acacaagaggctgtttccaggacttgaacccgtgacctttca 5306800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 16408646 - 16408737
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    ||||||| | |||||||| ||||| |||||||||||  |||||||||||||| |||||||||  ||||||||||||||||| ||||||||||    
T  16408646 ggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 16408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 87 - 212
Target Start/End: Complemental strand, 14983950 - 14983827
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||   || ||||||| ||||||||||||| ||||| |||||||||  |||||| | |    
T  14983950 taaagctcccgcatacgcagggtccgggaaggggtcccaccattta--gtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaag 14983853  T
Q  187 acttgaatccgtgacctttcaatcat 212  Q
    |||||||||||||||||| |||||||    
T  14983852 acttgaatccgtgaccttccaatcat 14983827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 16911680 - 16911562
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| || |||| || || | ||||||| |||||||||| ||||| ||||||||||| |||||||||| |||  |||||||||  |||||| |||    
T  16911680 taaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctagg 16911581  T
Q  187 acttgaatccgtgaccttt 205  Q
    ||||||| |||||||||||    
T  16911580 acttgaacccgtgaccttt 16911562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 6430645 - 6430762
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||| | |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  |||||||| |    
T  6430645 taaagctcccgcatacgcagggtccgggaagtggtcccaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccatg 6430741  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||||    
T  6430742 acttgaacccgtgacctttca 6430762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 20639677 - 20639777
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||    
T  20639677 taaagctcccgcatacgcagggtccgggaaggggtcccaccatttt-ggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccagg 20639775  T
Q  187 ac 188  Q
    ||    
T  20639776 ac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 25463237 - 25463120
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| ||||| | || || | ||||||| |||||||||||  ||| | |||||||||||||| ||| |||||| |||||||||  |||||||||||    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccagga 25463140  T
Q  188 cttgaatccgtgacctttca 207  Q
    |||||| |||||||||||||    
T  25463139 cttgaacccgtgacctttca 25463120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 40915942 - 40915830
Alignment:
Q  89 aagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggac 188  Q
    ||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||| ||||||| ||||||| |||||||||  ||||||||||||    
T  40915942 aagctcccgcatacgcagggtccgggaagggctcccaccattt--ggtgtattgtacgcagccttaccttgttttt-acacaagaggctgtttccaggac 40915846  T
Q  189 ttgaatccgtgacctt 204  Q
    ||||| ||||||||||    
T  40915845 ttgaacccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 44363149 - 44363269
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| ||||||||||||||||   ||||||||| || |||||||||||| ||||| |||  ||||| ||||    
T  44363149 taaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttacacacgaggctgttttcagg 44363248  T
Q  187 acttgaatccgtgacctttca 207  Q
    |||||||  ||||||||||||    
T  44363249 acttgaactcgtgacctttca 44363269  T

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Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 48598870 - 48598960
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  48598870 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 48598960  T

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Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 7909310 - 7909397
Alignment:
Q  97 gcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    ||||||| || |||| ||||||| |||||||||||  ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  7909310 gcatacgcagggttcgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctgttttt-acacaagagactgtttccagga 7909397  T

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Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 17043439 - 17043531
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||| ||| |||||||||  ||||||||||||||||| | |||||||||||    
T  17043439 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacctttca 17043531  T

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Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 19027921 - 19027846
Alignment:
Q  132 ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||   ||||||||||||||||| |||||||||||||    
T  19027921 ttggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacctttca 19027846  T

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Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 23501905 - 23501818
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    ||||||||| ||||| | || || | ||||||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  23501905 taaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagag 23501818  T

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Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 54175154 - 54175061
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatg-tttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||  || ||||||||||||||||||||||| |||||    
T  54175154 ggaaggggtcccaccatttt-ggtgtattgtacgcagccttaccctgttttt-acacaagaggctgttttccaggacttgaatccgtgacatttca 54175061  T

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Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 25343279 - 25343189
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacct 203  Q
    ||||||| ||| ||| |||||||| ||||||||||| ||||||||||||||| |||||||||| | ||||||| ||||||| | |||||||    
T  25343279 ggaaggggtccaaccctttttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacct 25343189  T

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Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 30639495 - 30639378
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||| | || || | ||||||| || ||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||    
T  30639495 taaagctcccgcatatgcagggtccgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgttttt-acacaagagtctgtttccagg 30639399  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| | |||||||||||    
T  30639398 acttgaaccagtgacctttca 30639378  T

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Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 9832358 - 9832448
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  ||||| ||||||||||| |||||||||||||    
T  9832358 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgttttcaggacttgaacccgtgacctttca 9832448  T

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Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 20225072 - 20224982
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| || ||||||||||    
T  20225072 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggttgtttccaggacttgaacccatgacctttca 20224982  T

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Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 21489203 - 21489096
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| ||||||| || |||| ||||||| |||||||||||| |||  ||||||||||  ||||| |||||||| || ||||||  |||||||||||    
T  21489203 aaagctcccgcatacgcagggttcgggaaggggtcccaccatttt-ggtgcattgtacgcagtcttactctgttttttacgcaagaggctgtttccagga 21489105  T
Q  188 cttgaatcc 196  Q
    |||||||||    
T  21489104 cttgaatcc 21489096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 47528575 - 47528665
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||| | |||||||||||    
T  47528575 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacctgtgacctttca 47528665  T

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Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 54967135 - 54967019
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| ||||| |||| || | ||||||| |||||||||||  ||||||||||| ||||||||||||||||||| |||||||||  | ||||||| |    
T  54967135 aaagctcccgcatatgtagggtacgggaaggggtcccaccattt--ggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaa 54967039  T
Q  188 cttgaatccgtgacctttca 207  Q
    ||||||   |||||||||||    
T  54967038 cttgaacatgtgacctttca 54967019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 11054209 - 11054283
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| |||||||||||  |||||||||||||  |||||||||| ||||| ||||||||||| |||||||||||||    
T  11054209 tttggtgtattgtacgcagtcttaccctgtttt--acacaagagactgttttcaggacttgaacccgtgacctttca 11054283  T

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Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 35567286 - 35567168
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||| ||| || |||| ||||||| |||||||||||  ||| | |||||| || ||||||||||||||| ||||||| |  |||||||| |    
T  35567286 taaagctcccgcagacgcagggttcgggaaggggtcccaccattt--ggtgtgttgtacacagccttaccctgttttttacacaagtggctgtttccaag 35567189  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| || ||||||||||    
T  35567188 acttgaacccatgacctttca 35567168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 29207943 - 29208033
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||    ||||||||||||||| |||||||||||||    
T  29207943 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggcaatttccaggacttgaacccgtgacctttca 29208033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 25629165 - 25629069
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    ||||||||| ||||| |||| || | ||||||| ||||||||  |||||| |||||||| || ||||||||| ||||| |||||||||| |||||||||    
T  25629165 taaagctcccgcatatgtagggtccgggaaggggtcccacca--tttggtgtattgtacacagccttaccctattttttacacaagagactgtttccag 25629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 30581484 - 30581602
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctg-tttttgacacaagagaatgtttccag 185  Q
    |||||||||| |||| | || || | ||||||| |||||||||||| ||| |||||||| || |||||||||| ||||| |||||||||  ||||||||     
T  30581484 taaagctcctacatatgcagggtccgggaaggggtcccaccatttt-ggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccac 30581582  T
Q  186 gacttgaatccgtgaccttt 205  Q
    |||||||| || ||||||||    
T  30581583 gacttgaacccttgaccttt 30581602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 13256439 - 13256505
Alignment:
Q  108 gttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    |||| ||||||| |||||| ||| ||||| ||||||||||| ||||||||||||||| |||||||||    
T  13256439 gttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttacacaagag 13256505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 20908655 - 20908760
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || |||| ||||||| |||||||| ||||||| ||||||||||| ||||||| | ||||| | | ||||  ||||||||| |    
T  20908655 taaagctcccgcatacgcagggttcgggaaggggtcccacca-ttttggtgtattgtacgcagccttaccttcttttttagaaaagacgatgtttccatg 20908753  T
Q  187 acttgaa 193  Q
    |||||||    
T  20908754 acttgaa 20908760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 7385537 - 7385613
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||| || |||||||||||| ||||| ||||| |||  |||||||||| |||||| |||||||||||||    
T  7385537 tttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacctttca 7385613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 41018855 - 41018930
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||||| | |||||||||  |||| |||||||||  ||||||||||||||||| |||||||||||||    
T  41018855 tttggtgtattgtacgtagccttaccctaatttt-acacaagaggttgtttccaggacttgaacccgtgacctttca 41018930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 49938638 - 49938727
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||| ||| ||||||||   ||||||||| |||||| |||||||||  ||||||||||||||||| | |||||||||||    
T  49938638 ggaaggggtcccaccatttt-ggtgtattgtac---accttaccccgttttt-acacaagaggctgtttccaggacttgaacctgtgacctttca 49938727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 207
Target Start/End: Original strand, 487186 - 487272
Alignment:
Q  120 atcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||||||||| | | ||||||||||| | ||||| ||||||  |||||||||  |||||||| |||||||| |||||||||||||    
T  487186 atcccaccattttag-tgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttca 487272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 10660522 - 10660416
Alignment:
Q  86 ttaaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    |||||||||| ||||||| || ||  |||||||| || ||||||| ||||| ||||||| ||| || |||||| ||||| ||| |||||  |||||||||    
T  10660522 ttaaagctcccgcatacgcag-gtcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccag 10660424  T
Q  186 gacttgaa 193  Q
    ||||||||    
T  10660423 gacttgaa 10660416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 10874667 - 10874561
Alignment:
Q  86 ttaaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    |||||||||| ||||||| || ||  |||||||| || ||||||| ||||| ||||||| ||| || |||||| ||||| ||| |||||  |||||||||    
T  10874667 ttaaagctcccgcatacgcag-gtcttggaaggggtctcaccattattggtgtattgtatgcagccataccctattttttacataagaggttgtttccag 10874569  T
Q  186 gacttgaa 193  Q
    ||||||||    
T  10874568 gacttgaa 10874561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 54730368 - 54730249
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttg-acacaagagaatgtttccag 185  Q
    ||||||||| ||||||| || || | ||||||| | ||| |||| ||||| |||| |||||| ||||| ||| |||||  |||||||||  |||||| ||    
T  54730368 taaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggctgtttctag 54730269  T
Q  186 gacttgaatccgtgaccttt 205  Q
    |||||||| |||||||||||    
T  54730268 gacttgaacccgtgaccttt 54730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 9987879 - 9987958
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaat 194  Q
    ||||||| |||||||||||  ||| ||||||| ||| ||||||||| || || |||||||||  ||||||||||||||||||    
T  9987879 ggaaggggtcccaccattt--ggtgtattgtatgcagccttaccctattgtttacacaagaggttgtttccaggacttgaat 9987958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 14590905 - 14590835
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttg-acacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||| |||||||||||||||  | |||||||  |||||| ||||||||||||||||||||||||    
T  14590905 tattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttca 14590835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 42164224 - 42164285
Alignment:
Q  145 cgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||| ||||||||||||||| |||||||||  |||||||| |||||||| |||||||||||||    
T  42164224 cgcagccttaccctgttttt-acacaagaggttgtttccaagacttgaacccgtgacctttca 42164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 36589859 - 36589755
Alignment:
Q  88 aaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagga 187  Q
    |||||||| |||||| ||| |||| ||||||| |||||||||||| ||| || |||   || | ||||| ||||||| |||||||||  |||||||||||    
T  36589859 aaagctcccgcatacatagggttcaggaaggggtcccaccatttt-ggtgtactgtcaacagcattaccatgttttttacacaagaggctgtttccagga 36589761  T
Q  188 cttgaa 193  Q
    ||||||    
T  36589760 cttgaa 36589755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 49796911 - 49796818
Alignment:
Q  89 aagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccag 185  Q
    ||||||| ||||||| || |||| ||||||| ||||||||  |||||| ||||||||||| ||||||| || |||| |||||||||  |||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcagccttaccatg-ttttaacacaagaggctgtttccag 49796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 47441591 - 47441667
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| |||||||| || |||||||||| |||| ||| |||||| ||||||  ||||||||| | |||||||||||    
T  47441591 tttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttca 47441667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 51865057 - 51865142
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    ||||||||| ||||||| || || | |||||||  ||||||||||  ||| ||||||||||| ||||||| ||||||| |||||||||    
T  51865057 taaagctcccgcatacgcagggtccgggaaggggccccaccattt--ggtgtattgtacgcagccttaccatgttttttacacaagag 51865142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 20225166 - 20225119
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgt 160  Q
    ||||||| |||||||||| ||||| ||||||||||| |||||||||||    
T  20225166 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 20405179 - 20405128
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgttttt 164  Q
    ||||||| |||||||||| || || |||||||||||| ||||||||||||||    
T  20405179 ggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgttttt 20405128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 30352599 - 30352727
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaac----cttaccctg-----tttttgacacaagagaat 177  Q
    ||||||||| ||||||| || || |  |||||| |||||||||||||||| ||||||||||| |    |||||||||     ||||| |||||||||  |    
T  30352599 taaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgtttttttttttacacaagaggct 30352698  T
Q  178 gtttccaggacttgaatccgtgacctttc 206  Q
    ||||||||||||  || ||||||||||||    
T  30352699 gtttccaggactctaacccgtgacctttc 30352727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 48327803 - 48327870
Alignment:
Q  108 gttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagaga 175  Q
    |||| ||||| | |||||||||| ||||| ||||||| |||  |||||||||||||| ||||||||||    
T  48327803 gttcgggaagaggtcccaccattattggtgtattgtatgcagtcttaccctgttttttacacaagaga 48327870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 51420646 - 51420584
Alignment:
Q  133 tggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatc 195  Q
    |||| |||||||| || ||||||||||||||  |||||||||  |||||||| ||||||||||    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaatc 51420584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 43035303 - 43035246
Alignment:
Q  150 ccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||||| | |||||||||  ||||||| ||||||||| |||||||||||||    
T  43035303 ccttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtgacctttca 43035246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 193
Target Start/End: Original strand, 39029113 - 39029184
Alignment:
Q  121 tcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    |||||||||||| | | |||||||| || ||||||||||||||| |||||||||  |||||||| | ||||||    
T  39029113 tcccaccattttcg-tgtattgtacacagccttaccctgttttttacacaagaggctgtttccaaggcttgaa 39029184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 41549421 - 41549373
Alignment:
Q  166 acacaagagaatgtttccaggacttgaatccgtgacctttcaatcatgt 214  Q
    |||||||||  ||||||||| ||||||| ||||||| ||||||||||||    
T  41549421 acacaagaggttgtttccagaacttgaacccgtgacatttcaatcatgt 41549373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 50856344 - 50856380
Alignment:
Q  178 gtttccaggacttgaatccgtgacctttcaatcatgt 214  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  50856344 gtttctaggacttgaacccgtgacctttcaatcatgt 50856380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 46947 - 46832
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||||||||||||||||||| ||||| |||||||||  |||||||||     
T  46947 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccctattttttacacaagaggttgtttccagc 46850  T
Q  187 acttgaatccgtgacctt 204  Q
    ||||||| ||||||||||    
T  46849 acttgaacccgtgacctt 46832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 24791 - 24876
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagag 174  Q
    ||||||||| ||||||| || |||| ||||||| |||||||||||  ||| | ||||||||| ||||||||||||||| |||||||||    
T  24791 taaagctcccgcatacgcagggttcgggaaggggtcccaccattt--ggtgtgttgtacgcagccttaccctgttttttacacaagag 24876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 46725 - 46796
Alignment:
Q  86 ttaaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccct 158  Q
    |||||||||| ||||||| || ||   ||||||| |||||||||||| ||||||||||| ||| |||||||||    
T  46725 ttaaagctcccgcatacgcagggtctgggaaggggtcccaccatttt-ggtatattgtatgcatccttaccct 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 4250 - 4155
Alignment:
Q  113 ggaagggatcccaccattt-ttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||| || ||||| ||||||||||||||||| ||||| ||| |||||||||  ||||||||||||||||| |||||||||||||    
T  4250 ggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttca 4155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 30667 - 30577
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  ||| ||||||||||| || |||||||||||  |||||||||  ||||||||||||||||| | |||||||||||    
T  30667 ggaaggggtcccaccattt--ggtgtattgtacgcagccctaccctgtttt--acacaagaggctgtttccaggacttgaaccggtgacctttca 30577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 10072 - 10185
Alignment:
Q  90 agctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggact 189  Q
    |||||||||||| | || || | ||||||| |||||| ||||  ||| |||||||||||  ||||| |||||||  |||||||||  |||||||||||||    
T  10072 agctcctgcatatgcagggtccgggaaggggtcccactattt--ggtgtattgtacgcagtcttactctgtttt--acacaagaggctgtttccaggact 10167  T
Q  190 tgaatccgtgacctttca 207  Q
    |||| |||||||||||||    
T  10168 tgaacccgtgacctttca 10185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 20400 - 20513
Alignment:
Q  90 agctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggact 189  Q
    |||||||||||| | || || | ||||||| |||||| ||||  ||| |||||||||||  ||||| |||||||  |||||||||  |||||||||||||    
T  20400 agctcctgcatatgcagggtccgggaaggggtcccactattt--ggtgtattgtacgcagtcttactctgtttt--acacaagaggctgtttccaggact 20495  T
Q  190 tgaatccgtgacctttca 207  Q
    |||| |||||||||||||    
T  20496 tgaacccgtgacctttca 20513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 10926 - 10811
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| ||||||| || || | ||||||| |||||||||||  ||| ||||| ||||| || |||||||||||| |||||||||  ||||| |||     
T  10926 taaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattggacgcagccctaccctgttttttacacaagaggttgttttcaga 10829  T
Q  187 acttgaatccgtgacctt 204  Q
     |||||| ||||||||||    
T  10828 ccttgaacccgtgacctt 10811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 35078 - 35152
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttg-acacaagagaatgtttccaggacttgaatccgtgacctt 204  Q
    |||||| ||||||||||| ||||||||||||||   |||||||||| ||||| ||||||||||| ||||||||||    
T  35078 tttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgacctt 35152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 13069 - 13160
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||||||||||   ||| ||||||||||| ||||||| ||||||| || ||||||  ||||||||||||||||| | |||||||||||    
T  13069 ggaaggggtcccaccattc--ggtgtattgtacgcagccttaccttgttttt-acgcaagaggctgtttccaggacttgaaccggtgacctttca 13160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 226473 - 226543
Alignment:
Q  138 tattgtacgcaaccttaccctgtttttg-acacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| ||| |||||||||||||||  | |||||||  |||||| ||||||||||||||||||||||||    
T  226473 tattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttca 226543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 11203 - 11129
Alignment:
Q  131 tttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    |||||| ||||||| ||| ||||||  ||||||  |||||||||  ||||||||||||||||| |||||||||||||    
T  11203 tttggtgtattgtaagcagccttactttgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 11129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 207
Target Start/End: Complemental strand, 23689 - 23597
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaatccgtgacctttca 207  Q
    ||||||| |||||||||||  | || |||||||||| ||| ||||||||||| |||||||||  ||||| || |||||||| ||||  |||||||    
T  23689 ggaaggggtcccaccattt--gctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttgaacccgtaccctttca 23597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 207
Target Start/End: Original strand, 1606 - 1722
Alignment:
Q  87 taaagctcctgcatacgtagagttctggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccagg 186  Q
    ||||||||| |||||||  | || | ||||||| ||||| |||||  ||| ||||||| ||| ||||| ||||||||  |||||||||  ||||| ||||    
T  1606 taaagctcccgcatacgccgggtccgggaaggggtcccatcattt--ggtgtattgtatgcagccttatcctgtttt--acacaagaggttgttttcagg 1701  T
Q  187 acttgaatccgtgacctttca 207  Q
    ||||||| || ||||||||||    
T  1702 acttgaacccatgacctttca 1722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 193
Target Start/End: Original strand, 48679 - 48755
Alignment:
Q  113 ggaagggatcccaccatttttggtatattgtacgcaaccttaccctgtttttgacacaagagaatgtttccaggacttgaa 193  Q
    ||||||| |||||||||||  ||| ||||||||||| ||||||||||||||  |||||||||  ||||||||  |||||||    
T  48679 ggaaggggtcccaccattt--ggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaccacttgaa 48755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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