View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9903_low_9 (Length: 249)

Name: NF9903_low_9
Description: NF9903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9903_low_9
NF9903_low_9
[»] chr4 (34 HSPs)
chr4 (15-230)||(27968065-27968280)
chr4 (34-82)||(19422365-19422413)
chr4 (34-80)||(23815317-23815363)
chr4 (22-71)||(51044545-51044594)
chr4 (22-71)||(55599101-55599150)
chr4 (38-82)||(10192235-10192279)
chr4 (34-82)||(30024647-30024695)
chr4 (38-82)||(41701516-41701560)
chr4 (38-82)||(42321954-42321998)
chr4 (38-82)||(43372044-43372088)
chr4 (38-82)||(50745951-50745995)
chr4 (38-82)||(54325112-54325156)
chr4 (34-82)||(54327524-54327572)
chr4 (39-79)||(55870419-55870459)
chr4 (38-81)||(24929444-24929487)
chr4 (36-70)||(11917508-11917542)
chr4 (38-80)||(20936079-20936121)
chr4 (41-71)||(30743319-30743349)
chr4 (21-71)||(35743238-35743288)
chr4 (44-77)||(3662305-3662338)
chr4 (38-71)||(27623586-27623619)
chr4 (34-63)||(33361412-33361441)
chr4 (38-70)||(4071833-4071865)
chr4 (38-81)||(4191690-4191734)
chr4 (34-78)||(9319274-9319318)
chr4 (34-66)||(13216295-13216327)
chr4 (22-77)||(15969838-15969894)
chr4 (22-78)||(20907108-20907164)
chr4 (34-70)||(27876243-27876279)
chr4 (38-82)||(30338667-30338711)
chr4 (38-82)||(32724070-32724114)
chr4 (22-70)||(41606121-41606169)
chr4 (34-70)||(49219086-49219122)
chr4 (37-77)||(52926178-52926218)
[»] chr1 (34 HSPs)
chr1 (22-82)||(4200164-4200224)
chr1 (22-82)||(15360829-15360889)
chr1 (26-82)||(4215311-4215367)
chr1 (26-70)||(36641814-36641858)
chr1 (34-81)||(14737781-14737828)
chr1 (36-82)||(42336611-42336657)
chr1 (34-80)||(49517017-49517063)
chr1 (36-81)||(7274015-7274060)
chr1 (34-108)||(46980182-46980252)
chr1 (26-82)||(5941522-5941578)
chr1 (38-82)||(17420154-17420198)
chr1 (38-82)||(21516324-21516368)
chr1 (34-82)||(44936665-44936713)
chr1 (26-82)||(45804216-45804272)
chr1 (23-82)||(48830151-48830210)
chr1 (39-81)||(6933037-6933079)
chr1 (34-64)||(9777830-9777860)
chr1 (38-80)||(17631178-17631220)
chr1 (34-80)||(49557088-49557134)
chr1 (41-82)||(4363707-4363748)
chr1 (38-108)||(30285842-30285908)
chr1 (34-82)||(1879102-1879150)
chr1 (22-70)||(6981427-6981475)
chr1 (38-66)||(15581067-15581095)
chr1 (34-82)||(19462841-19462888)
chr1 (38-82)||(23895287-23895331)
chr1 (34-82)||(29007791-29007839)
chr1 (38-82)||(33527222-33527266)
chr1 (26-82)||(35080145-35080201)
chr1 (38-66)||(36070201-36070229)
chr1 (38-82)||(45990133-45990177)
chr1 (38-82)||(45999363-45999407)
chr1 (38-66)||(46252773-46252801)
chr1 (38-82)||(52286629-52286673)
[»] chr3 (41 HSPs)
chr3 (38-82)||(20192681-20192725)
chr3 (22-82)||(38462216-38462276)
chr3 (38-82)||(49586991-49587035)
chr3 (28-82)||(31364842-31364896)
chr3 (40-82)||(33965566-33965608)
chr3 (22-71)||(24605102-24605151)
chr3 (34-71)||(54775075-54775112)
chr3 (34-82)||(10101551-10101599)
chr3 (34-82)||(10212476-10212524)
chr3 (38-82)||(22232777-22232821)
chr3 (46-82)||(26599137-26599173)
chr3 (45-81)||(40122828-40122864)
chr3 (34-82)||(43397774-43397822)
chr3 (34-70)||(48397593-48397629)
chr3 (39-79)||(52450130-52450170)
chr3 (35-66)||(2152284-2152315)
chr3 (23-70)||(2175936-2175983)
chr3 (38-69)||(49546575-49546606)
chr3 (35-82)||(53736188-53736235)
chr3 (26-64)||(16790181-16790219)
chr3 (35-85)||(26330388-26330438)
chr3 (34-80)||(48364956-48365002)
chr3 (40-77)||(1816536-1816573)
chr3 (41-70)||(23793542-23793571)
chr3 (34-71)||(24235769-24235806)
chr3 (38-75)||(25964393-25964430)
chr3 (22-67)||(37788796-37788840)
chr3 (38-70)||(1395622-1395654)
chr3 (38-82)||(15304422-15304466)
chr3 (39-71)||(20267107-20267139)
chr3 (34-70)||(23952193-23952229)
chr3 (38-82)||(24887358-24887402)
chr3 (38-70)||(26990685-26990717)
chr3 (23-63)||(30669064-30669104)
chr3 (34-82)||(32663589-32663636)
chr3 (38-82)||(34954034-34954078)
chr3 (38-82)||(42038940-42038984)
chr3 (38-82)||(43116503-43116547)
chr3 (38-66)||(49465754-49465782)
chr3 (22-66)||(51455869-51455912)
chr3 (45-81)||(53457335-53457371)
[»] chr2 (35 HSPs)
chr2 (34-82)||(3458604-3458652)
chr2 (23-71)||(5998788-5998836)
chr2 (26-82)||(17952776-17952832)
chr2 (38-82)||(18962113-18962157)
chr2 (26-82)||(28803581-28803637)
chr2 (26-82)||(33192132-33192188)
chr2 (22-69)||(5045245-5045292)
chr2 (26-81)||(32098384-32098439)
chr2 (28-82)||(1939407-1939461)
chr2 (26-71)||(9878768-9878813)
chr2 (39-72)||(26167698-26167731)
chr2 (22-70)||(3423855-3423903)
chr2 (34-82)||(10143119-10143167)
chr2 (34-82)||(14666495-14666543)
chr2 (26-62)||(29628837-29628873)
chr2 (22-82)||(30537602-30537662)
chr2 (26-70)||(31461377-31461421)
chr2 (22-81)||(7282953-7283012)
chr2 (40-70)||(6546931-6546961)
chr2 (44-82)||(33256697-33256735)
chr2 (45-82)||(14209235-14209272)
chr2 (38-79)||(29729876-29729917)
chr2 (33-82)||(31740034-31740083)
chr2 (26-79)||(32615370-32615423)
chr2 (50-127)||(36863658-36863732)
chr2 (37-70)||(43199193-43199226)
chr2 (34-70)||(6988062-6988098)
chr2 (34-82)||(13630356-13630404)
chr2 (36-76)||(33576675-33576715)
chr2 (38-82)||(34054976-34055020)
chr2 (34-70)||(34339853-34339889)
chr2 (38-82)||(37053545-37053589)
chr2 (22-70)||(38239638-38239686)
chr2 (38-82)||(40837503-40837547)
chr2 (36-88)||(42817445-42817497)
[»] chr8 (31 HSPs)
chr8 (22-71)||(38561661-38561710)
chr8 (26-70)||(41620378-41620422)
chr8 (26-81)||(34563189-34563244)
chr8 (34-77)||(40728498-40728541)
chr8 (12-66)||(1892302-1892356)
chr8 (34-71)||(26820146-26820183)
chr8 (22-66)||(1664318-1664362)
chr8 (22-78)||(6918258-6918314)
chr8 (34-70)||(29699201-29699237)
chr8 (36-71)||(8799354-8799389)
chr8 (22-64)||(3945209-3945251)
chr8 (40-82)||(6950275-6950317)
chr8 (39-77)||(10437837-10437875)
chr8 (36-82)||(11494102-11494148)
chr8 (27-81)||(40280281-40280335)
chr8 (40-82)||(42237497-42237539)
chr8 (38-71)||(11119085-11119118)
chr8 (34-83)||(12224973-12225022)
chr8 (44-77)||(20672729-20672762)
chr8 (38-71)||(31315539-31315572)
chr8 (46-79)||(35298556-35298589)
chr8 (38-71)||(39392747-39392780)
chr8 (22-66)||(1666980-1667024)
chr8 (38-70)||(2364560-2364592)
chr8 (22-82)||(2699241-2699301)
chr8 (38-70)||(11569546-11569578)
chr8 (26-82)||(12361131-12361187)
chr8 (38-70)||(14482153-14482185)
chr8 (38-70)||(26370939-26370971)
chr8 (38-82)||(27728096-27728140)
chr8 (38-82)||(34788502-34788546)
[»] chr7 (38 HSPs)
chr7 (38-82)||(7243595-7243639)
chr7 (34-82)||(39591542-39591590)
chr7 (31-82)||(1373615-1373666)
chr7 (22-77)||(5939019-5939074)
chr7 (44-82)||(5006584-5006622)
chr7 (38-79)||(5276175-5276216)
chr7 (41-82)||(17989098-17989139)
chr7 (38-82)||(1417215-1417259)
chr7 (22-78)||(5715117-5715173)
chr7 (26-70)||(42656454-42656498)
chr7 (38-77)||(2999142-2999181)
chr7 (26-81)||(3241380-3241435)
chr7 (22-69)||(30133984-30134031)
chr7 (42-81)||(44239056-44239095)
chr7 (24-70)||(8680929-8680975)
chr7 (44-82)||(9527165-9527203)
chr7 (44-82)||(45777246-45777284)
chr7 (22-84)||(47004022-47004084)
chr7 (34-71)||(6630547-6630584)
chr7 (34-67)||(7623085-7623118)
chr7 (38-71)||(31341145-31341178)
chr7 (22-71)||(35808990-35809039)
chr7 (38-82)||(2727435-2727479)
chr7 (26-82)||(4966095-4966151)
chr7 (38-70)||(7100706-7100738)
chr7 (38-70)||(8445237-8445269)
chr7 (26-82)||(11208388-11208444)
chr7 (38-82)||(12835012-12835056)
chr7 (26-66)||(21853207-21853247)
chr7 (34-82)||(23918904-23918952)
chr7 (26-70)||(24973883-24973927)
chr7 (42-82)||(29363473-29363513)
chr7 (49-81)||(30160966-30160998)
chr7 (38-82)||(30456525-30456569)
chr7 (38-82)||(33894574-33894617)
chr7 (38-82)||(35536058-35536102)
chr7 (46-82)||(45593794-45593830)
chr7 (34-70)||(46281218-46281254)
[»] chr6 (27 HSPs)
chr6 (38-82)||(2027481-2027525)
chr6 (34-71)||(5328921-5328958)
chr6 (25-70)||(24836286-24836331)
chr6 (34-66)||(2206537-2206569)
chr6 (38-86)||(13360686-13360734)
chr6 (34-70)||(28531628-28531664)
chr6 (43-82)||(3181143-3181182)
chr6 (29-76)||(27857317-27857364)
chr6 (31-85)||(26491618-26491672)
chr6 (34-80)||(30004850-30004896)
chr6 (22-76)||(32975913-32975967)
chr6 (49-86)||(1497943-1497980)
chr6 (45-82)||(7713983-7714020)
chr6 (38-108)||(28660813-28660879)
chr6 (38-79)||(29957988-29958029)
chr6 (38-71)||(30865433-30865466)
chr6 (34-79)||(33068639-33068684)
chr6 (38-82)||(1402947-1402991)
chr6 (38-82)||(3171506-3171550)
chr6 (26-70)||(4248897-4248941)
chr6 (44-76)||(4420574-4420606)
chr6 (38-70)||(5551413-5551445)
chr6 (34-66)||(6016466-6016498)
chr6 (34-82)||(7785817-7785865)
chr6 (50-82)||(10154184-10154216)
chr6 (38-82)||(22742317-22742361)
chr6 (38-82)||(29274304-29274348)
[»] chr5 (22 HSPs)
chr5 (38-82)||(14295457-14295501)
chr5 (38-82)||(28586841-28586885)
chr5 (22-82)||(35135737-35135797)
chr5 (28-70)||(11615449-11615491)
chr5 (36-78)||(29117009-29117051)
chr5 (41-82)||(583848-583889)
chr5 (38-82)||(37063149-37063193)
chr5 (38-82)||(42181167-42181211)
chr5 (36-79)||(985582-985625)
chr5 (38-81)||(7096203-7096246)
chr5 (31-82)||(37526274-37526325)
chr5 (31-82)||(37690712-37690763)
chr5 (38-80)||(10303752-10303794)
chr5 (32-82)||(37588435-37588485)
chr5 (37-71)||(39823207-39823241)
chr5 (38-78)||(1019523-1019563)
chr5 (38-82)||(20982210-20982254)
chr5 (34-70)||(32969204-32969240)
chr5 (38-70)||(35095870-35095902)
chr5 (37-81)||(36639472-36639516)
chr5 (38-78)||(36646191-36646231)
chr5 (46-82)||(39750102-39750138)
[»] scaffold0508 (1 HSPs)
scaffold0508 (34-82)||(9850-9898)
[»] scaffold0199 (1 HSPs)
scaffold0199 (22-66)||(6759-6803)
[»] scaffold0103 (1 HSPs)
scaffold0103 (34-82)||(51515-51563)
[»] scaffold0053 (1 HSPs)
scaffold0053 (38-82)||(20130-20174)
[»] scaffold0024 (1 HSPs)
scaffold0024 (34-82)||(27523-27571)
[»] scaffold0590 (1 HSPs)
scaffold0590 (38-71)||(1160-1193)
[»] scaffold0275 (1 HSPs)
scaffold0275 (38-71)||(2782-2815)
[»] scaffold0060 (1 HSPs)
scaffold0060 (38-70)||(63372-63404)
[»] scaffold0049 (1 HSPs)
scaffold0049 (34-70)||(58180-58216)


Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 15 - 230
Target Start/End: Original strand, 27968065 - 27968280
Alignment:
Q  15 cataggtgtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatatgagtaaattatacattgttttcataaccatct 114  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  27968065 cataggtgtgtttatataaaagttatttttataacaaatgataaaataaagtcaaacagtttttgtatgagtaaattatacattgttttcataaccatct 27968164  T
Q  115 tggagagtttatgcaagttgtttctaccattcttttgaacaatctcacaagtgtgtgtaagtactcaagtgaggtttcacacaaatgttataggtttcac 214  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27968165 tggagagtttatgcaagttgtttctaccattctttcgaacaatctcacaagtatgtgtaagtactcaagtgaggtttcacacaaatgttataggtttcac 27968264  T
Q  215 tgttaaaacaagttgc 230  Q
    ||||||||||||||||    
T  27968265 tgttaaaacaagttgc 27968280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 19422365 - 19422413
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  19422365 aagttatttctataacaaaagatataataaagtcaaacatttttcatat 19422413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 23815317 - 23815363
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcat 80  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  23815317 aagttatttctataacaaaagataaaataatgtcaaactgttttcat 23815363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 51044594 - 51044545
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaac 71  Q
    |||||||| || ||| ||||| ||||||||||||||||||||||||||||    
T  51044594 gtgtttatgtataagctatttctataacaaaagataaaataaagtcaaac 51044545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 55599101 - 55599150
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||||||||| |||||| |||| |||||||||| |||||||||||||||    
T  55599101 gtgtttatatataagttacttttgtaacaaaagacaaaataaagtcaaac 55599150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 10192235 - 10192279
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||    
T  10192235 tatttttataacaaaagatagaataaagtcaaattgttttcatat 10192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 30024647 - 30024695
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| ||||||||||||||||||||||| |||  ||||||||||    
T  30024647 aagttatttctataacaaaagataaaataaagtaaaattgttttcatat 30024695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 41701560 - 41701516
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||    
T  41701560 tatttatataacaaaagataaaataaagtcaaatcgttttcatat 41701516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 42321998 - 42321954
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||    
T  42321998 tatttttataacaaatgataaaataaagtcaaattgttttcatat 42321954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 43372088 - 43372044
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||||||||||| |||||||| ||||| ||||    
T  43372088 tatttttataacaaaagataaaatacagtcaaactgtttttatat 43372044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 50745951 - 50745995
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||    
T  50745951 tatttttataacaaaagataaaataaaatcaaactgtttttatat 50745995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 54325156 - 54325112
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||||    
T  54325156 tatttctattacaaaagataaaataaagtcaaactgttttcatat 54325112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 54327572 - 54327524
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||| ||||||||||||||||| |||||||||| ||||||||||    
T  54327572 aagttgtttctataacaaaagataaaacaaagtcaaactgttttcatat 54327524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 55870459 - 55870419
Alignment:
Q  39 atttttataacaaaagataaaataaagtcaaacagttttca 79  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  55870459 atttttataacaaaagatcaaataaagtcaaactgttttca 55870419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 24929444 - 24929487
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||    
T  24929444 tatttctataacaaaagataaaataaagtctaactgttttcata 24929487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 11917508 - 11917542
Alignment:
Q  36 gttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  11917508 gttatttttgtaacaaaagataaaataaagtcaaa 11917542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 20936121 - 20936079
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcat 80  Q
    ||||| ||||||||||||||||||||||||||||  |||||||    
T  20936121 tatttctataacaaaagataaaataaagtcaaactattttcat 20936079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 71
Target Start/End: Original strand, 30743319 - 30743349
Alignment:
Q  41 ttttataacaaaagataaaataaagtcaaac 71  Q
    |||||||||||||||||||||||||||||||    
T  30743319 ttttataacaaaagataaaataaagtcaaac 30743349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 35743238 - 35743288
Alignment:
Q  21 tgtgtttatataaaagttatttttataacaaaagataaaataaagtcaaac 71  Q
    |||||| || || ||||||||| |||||||||||||||||||||| |||||    
T  35743238 tgtgttgatgtacaagttatttctataacaaaagataaaataaaggcaaac 35743288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 3662305 - 3662338
Alignment:
Q  44 tataacaaaagataaaataaagtcaaacagtttt 77  Q
    |||||||||||||||||||||||||||| |||||    
T  3662305 tataacaaaagataaaataaagtcaaactgtttt 3662338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 27623586 - 27623619
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  27623586 tatttgtataacaaaagataaaataaagtcaaac 27623619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 63
Target Start/End: Original strand, 33361412 - 33361441
Alignment:
Q  34 aagttatttttataacaaaagataaaataa 63  Q
    ||||||||||||||||||||||||||||||    
T  33361412 aagttatttttataacaaaagataaaataa 33361441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 4071833 - 4071865
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| |||||||||||||||||||||||||||    
T  4071833 tatttctataacaaaagataaaataaagtcaaa 4071865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 4191690 - 4191734
Alignment:
Q  38 tatttttataacaaaagataaaa-taaagtcaaacagttttcata 81  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||    
T  4191690 tatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 9319318 - 9319274
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttc 78  Q
    |||| |||| |||||||||||||| ||||||||||| ||||||||    
T  9319318 aagtaatttctataacaaaagatagaataaagtcaatcagttttc 9319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 13216327 - 13216295
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagt 66  Q
    |||||||||||||| ||||||||||||||||||    
T  13216327 aagttatttttatagcaaaagataaaataaagt 13216295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 15969838 - 15969894
Alignment:
Q  22 gtgtttatataaaagttatttttat-aacaaaagataaaataaagtcaaacagtttt 77  Q
    |||||||| || ||||||||||||| ||| ||||||||| ||||||||| |||||||    
T  15969838 gtgtttatgtataagttatttttataaacgaaagataaagtaaagtcaatcagtttt 15969894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 20907108 - 20907164
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttc 78  Q
    |||||||| || ||| ||||| ||||| ||||||||||||||||| |||| ||||||    
T  20907108 gtgtttatgtataagctatttgtataagaaaagataaaataaagtgaaactgttttc 20907164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 27876243 - 27876279
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  27876243 aagttatttttatgacaaaagataaagtaaagtcaaa 27876279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 30338711 - 30338667
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||| |||||||| |||| ||||||||||    
T  30338711 tatttctataacaaaagatagaataaagttaaactgttttcatat 30338667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 32724070 - 32724114
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||| ||||||||||||||||||||||||  |||||||||    
T  32724070 tatttctattacaaaagataaaataaagtcaaactattttcatat 32724114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 41606121 - 41606169
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    |||||||| |||||  |||||| |||||||| |||||||||||||||||    
T  41606121 gtgtttatgtaaaaactattttgataacaaaggataaaataaagtcaaa 41606169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 49219086 - 49219122
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  49219086 aagttatttctataacaaaatataaaataaagtcaaa 49219122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 52926178 - 52926218
Alignment:
Q  37 ttatttttataacaaaagataaaataaagtcaaacagtttt 77  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  52926178 ttatttctataacaaaagataaaatatagtcaaactgtttt 52926218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 4200164 - 4200224
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||   ||||||||||    
T  4200164 gtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatat 4200224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 15360829 - 15360889
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||| ||  |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  15360829 gtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatat 15360889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 4215311 - 4215367
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||| |||||||||| ||| |||| |||||||||||||||||| ||||||||||    
T  4215311 ttatatataagttattttgatagcaaatgataaaataaagtcaaactgttttcatat 4215367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 36641814 - 36641858
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||    
T  36641814 ttatatataagttatttctataacaaaagataaaataaagtcaaa 36641858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 14737828 - 14737781
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    ||||||||| |||||||||||||||||||||||||||  |||||||||    
T  14737828 aagttatttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 42336611 - 42336657
Alignment:
Q  36 gttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||    
T  42336611 gttatttttataacaaaaaataaaataaagtcaagcaattttcatat 42336657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 49517017 - 49517063
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcat 80  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||    
T  49517017 aagttatttctataacaaaagataaaataaagtcaaattgttttcat 49517063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 7274060 - 7274015
Alignment:
Q  36 gttatttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||    
T  7274060 gttatttttataacaaaagatgaaataaagtcaaattgttttcata 7274015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 46980252 - 46980182
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatatgagtaaattatacattgttttcataa 108  Q
    ||||| |||||||| ||||||||||||||||| ||||| |||||||||    ||| ||||| |||||||||||||    
T  46980252 aagttgtttttatatcaaaagataaaataaagacaaactgttttcata----taagttataaattgttttcataa 46980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 5941578 - 5941522
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||| ||| |||||| |||||| | |||||||||||||||||| ||||||||||    
T  5941578 ttatatataagctattttgataacagatgataaaataaagtcaaactgttttcatat 5941522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 17420154 - 17420198
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||    
T  17420154 tatttttataagaaaagataaaataaagtcgaacaattttcatat 17420198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 21516324 - 21516368
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||    
T  21516324 tatttttataagaaaagataaaatgaagtcaaatagttttcatat 21516368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 44936713 - 44936665
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| ||||||||||||||| ||||||||||||  |||||||||    
T  44936713 aagttatttctataacaaaagataagataaagtcaaactattttcatat 44936665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 45804216 - 45804272
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||| ||||| |||  |||||||||||||||||  |||||||||    
T  45804216 ttatataaaagttatttctataataaataataaaataaagtcaaactattttcatat 45804272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 48830210 - 48830151
Alignment:
Q  23 tgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||| || ||||||||| ||| || |||||||||||||||||||||  |||||||||    
T  48830210 tgtttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatat 48830151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 6933079 - 6933037
Alignment:
Q  39 atttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    ||||||||||||||| ||||||||||||||||  |||||||||    
T  6933079 atttttataacaaaacataaaataaagtcaaattgttttcata 6933037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 9777830 - 9777860
Alignment:
Q  34 aagttatttttataacaaaagataaaataaa 64  Q
    |||||||||||||||||||||||||||||||    
T  9777830 aagttatttttataacaaaagataaaataaa 9777860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 17631220 - 17631178
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcat 80  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||    
T  17631220 tatttctataacaaaagataaaataaagtctaactgttttcat 17631178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 49557088 - 49557134
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcat 80  Q
    ||||||||| ||||||||||||||||||||||| ||| ||| |||||    
T  49557088 aagttatttctataacaaaagataaaataaagttaaatagtattcat 49557134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 4363748 - 4363707
Alignment:
Q  41 ttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  4363748 ttttataacaaaagattaaataatgtcaaactgttttcatat 4363707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 30285842 - 30285908
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatatgagtaaattatacattgttttcataa 108  Q
    ||||| ||||||||||| |||||||||||||| || ||||||||    |||||| ||| ||||||||||||    
T  30285842 tatttctataacaaaagttaaaataaagtcaatcaattttcata----taaattttactttgttttcataa 30285908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 1879150 - 1879102
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||| |||| ||||||| |||||||||||||||||||  ||||||||||    
T  1879150 aagtcatttctataacagaagataaaataaagtcaaaatgttttcatat 1879102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 6981427 - 6981475
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||||| || |||||| |||||||||| |||||| |||||||||    
T  6981427 gtgtttatatataaattatttctataacaaaaaataaaacaaagtcaaa 6981475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 66
Target Start/End: Original strand, 15581067 - 15581095
Alignment:
Q  38 tatttttataacaaaagataaaataaagt 66  Q
    |||||||||||||||||||||||||||||    
T  15581067 tatttttataacaaaagataaaataaagt 15581095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 19462888 - 19462841
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| |||||||| | ||||| ||||||||||||||||||||||    
T  19462888 aagttatttctataacaagatataaa-taaagtcaaacagttttcatat 19462841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 23895287 - 23895331
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||||||||||||||||| |||||| ||| ||||||    
T  23895287 tatttctataacaaaagataaaataaattcaaactgttctcatat 23895331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 29007839 - 29007791
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| |||||||||||| ||| |||||||||||  |||||||||    
T  29007839 aagttatttctataacaaaagaaaaattaaagtcaaactattttcatat 29007791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 33527266 - 33527222
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| || |||||||||||||||| |||||||| ||||||||||    
T  33527266 tatttctaaaacaaaagataaaatacagtcaaactgttttcatat 33527222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 35080201 - 35080145
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||| |||  |||| |||||||||| ||||||||||||||||| |||| |||||    
T  35080201 ttatatataagcaatttctataacaaaaaataaaataaagtcaaactgtttccatat 35080145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 66
Target Start/End: Original strand, 36070201 - 36070229
Alignment:
Q  38 tatttttataacaaaagataaaataaagt 66  Q
    |||||||||||||||||||||||||||||    
T  36070201 tatttttataacaaaagataaaataaagt 36070229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 45990177 - 45990133
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||| |||||||||||||||||| |||  ||||||||||    
T  45990177 tatttttatatcaaaagataaaataaagtaaaattgttttcatat 45990133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 45999407 - 45999363
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||||||||||| |||||||||||| | ||||||||    
T  45999407 tatttctataacaaaagataagataaagtcaaactgctttcatat 45999363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 66
Target Start/End: Complemental strand, 46252801 - 46252773
Alignment:
Q  38 tatttttataacaaaagataaaataaagt 66  Q
    |||||||||||||||||||||||||||||    
T  46252801 tatttttataacaaaagataaaataaagt 46252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 52286629 - 52286673
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| || |||||||||||||||||||| ||||| |||||||||    
T  52286629 tatttctacaacaaaagataaaataaagttaaacaattttcatat 52286673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 20192725 - 20192681
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  20192725 tatttatataacaaaagataaaataaagtcaaacagttttcatat 20192681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 38462216 - 38462276
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||| || ||| ||||| |||| ||||||||||||||||||||||| ||||||||||    
T  38462216 gtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatat 38462276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 49587035 - 49586991
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||    
T  49587035 tatttctataacaaaagataaaataaagtcaaactgttttcatat 49586991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 31364842 - 31364896
Alignment:
Q  28 atataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||| ||||||||||||||||| ||||||||||| || ||||||||||||    
T  31364842 atatataagctatttttataacaaaaggtaaaataaagttaagcagttttcatat 31364896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 33965608 - 33965566
Alignment:
Q  40 tttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  33965608 tttttataacaaaaggtaaaataaagtcaaactgttttcatat 33965566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 24605151 - 24605102
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaac 71  Q
    |||||||| || ||||||||| ||||||||||||| ||||||||||||||    
T  24605151 gtgtttatgtataagttatttctataacaaaagatgaaataaagtcaaac 24605102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 54775075 - 54775112
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  54775075 aagttatttctataacaaaagataaaataaagtcaaac 54775112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 10101599 - 10101551
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| ||||||||||||||||||||||| |||  ||||||||||    
T  10101599 aagttatttctataacaaaagataaaataaagttaaattgttttcatat 10101551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 10212524 - 10212476
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| ||||||||||||||||||||||| |||  ||||||||||    
T  10212524 aagttatttctataacaaaagataaaataaagttaaattgttttcatat 10212476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 22232777 - 22232821
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||    
T  22232777 tatttatataacaaatgataaaataaagtcaaactgttttcatat 22232821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 26599137 - 26599173
Alignment:
Q  46 taacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||||||||||| |||||||||||    
T  26599137 taacaaaagataaaataaagtcaaatagttttcatat 26599173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 40122864 - 40122828
Alignment:
Q  45 ataacaaaagataaaataaagtcaaacagttttcata 81  Q
    ||||||||||||||||||||||||||| |||||||||    
T  40122864 ataacaaaagataaaataaagtcaaactgttttcata 40122828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 43397774 - 43397822
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||| |||||| |||||||| ||||||||| ||||||||||    
T  43397774 aagttatttttacaacaaacgataaaatcaagtcaaactgttttcatat 43397822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 48397593 - 48397629
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||||||||| |||||||||||||||||||||    
T  48397593 aagttatttttataataaaagataaaataaagtcaaa 48397629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 52450170 - 52450130
Alignment:
Q  39 atttttataacaaaagataaaataaagtcaaacagttttca 79  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  52450170 atttctataacaaaagatgaaataaagtcaaacagttttca 52450130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 2152315 - 2152284
Alignment:
Q  35 agttatttttataacaaaagataaaataaagt 66  Q
    ||||||||||||||||||||||||||||||||    
T  2152315 agttatttttataacaaaagataaaataaagt 2152284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 2175983 - 2175936
Alignment:
Q  23 tgtttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||||  ||||||||||||||  ||||||||||||||||||||    
T  2175983 tgtttatatactagttatttttataaggaaagataaaataaagtcaaa 2175936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 49546606 - 49546575
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaa 69  Q
    ||||||||||||||||||||||||||||||||    
T  49546606 tatttttataacaaaagataaaataaagtcaa 49546575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 53736235 - 53736188
Alignment:
Q  35 agttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||| |||||||||||||||||||| |||||||  |||||||||    
T  53736235 agttatttctataacaaaagataaaataatgtcaaactattttcatat 53736188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 16790219 - 16790181
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaa 64  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  16790219 ttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 26330438 - 26330388
Alignment:
Q  35 agttatttttataacaaaagataaaataaagtcaaacagttttcatatgag 85  Q
    ||||||||||||||||||||| | ||||||||||||  ||| |||||||||    
T  26330438 agttatttttataacaaaagacagaataaagtcaaattgttatcatatgag 26330388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 48365002 - 48364956
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcat 80  Q
    |||||||||  ||||||||||||||||||||||||||  ||||||||    
T  48365002 aagttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 1816536 - 1816573
Alignment:
Q  40 tttttataacaaaagataaaataaagtcaaacagtttt 77  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  1816536 tttttataataaaagataaaataaagtcaaactgtttt 1816573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 23793542 - 23793571
Alignment:
Q  41 ttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||||||||||||||||||||||||    
T  23793542 ttttataacaaaagataaaataaagtcaaa 23793571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 24235806 - 24235769
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  24235806 aagttatttctataacaaaagataatataaagtcaaac 24235769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 25964393 - 25964430
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagtt 75  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  25964393 tatttttataacaaaagataaaataaattgaaacagtt 25964430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 37788796 - 37788840
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtc 67  Q
    |||||||| || |||||||||| |||||||||||||||||||||||    
T  37788796 gtgtttatgtataagttatttt-ataacaaaagataaaataaagtc 37788840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 1395622 - 1395654
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| |||||||||||||||||||||||||||    
T  1395622 tatttctataacaaaagataaaataaagtcaaa 1395654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 15304466 - 15304422
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||||||||||||||||||| |||  ||||||||||    
T  15304466 tatttctataacaaaagataaaataaagttaaattgttttcatat 15304422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 20267107 - 20267139
Alignment:
Q  39 atttttataacaaaagataaaataaagtcaaac 71  Q
    |||| ||||||||||||||||||||||||||||    
T  20267107 atttctataacaaaagataaaataaagtcaaac 20267139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 23952229 - 23952193
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  23952229 aagttatttctataacaaaagataaaattaagtcaaa 23952193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 24887402 - 24887358
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||| ||||||||||||||||||| || |||||||    
T  24887402 tatttctataacaatagataaaataaagtcaaactgtattcatat 24887358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 26990685 - 26990717
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| |||||||||||||||||||||||||||    
T  26990685 tatttctataacaaaagataaaataaagtcaaa 26990717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 30669104 - 30669064
Alignment:
Q  23 tgtttatataaaagttatttttataacaaaagataaaataa 63  Q
    ||||||| || ||| ||||||||||||||||||||||||||    
T  30669104 tgtttatgtataagctatttttataacaaaagataaaataa 30669064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 32663589 - 32663636
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| ||||||||||||| |||||| |||||||| |||||||||    
T  32663589 aagttatttctataacaaaagat-aaataaggtcaaacaattttcatat 32663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 34954034 - 34954078
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||| |||||||||||||||||| | ||||||||||    
T  34954034 tatttctataacacaagataaaataaagtcaagctgttttcatat 34954078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 42038940 - 42038984
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||  ||||||||||||| ||||||||||    
T  42038940 tatttctataacaaaagatctaataaagtcaaaccgttttcatat 42038984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 43116547 - 43116503
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||||| || ||||||| |||||||||    
T  43116547 tatttctataacaaaagataaaatcaaatcaaacaattttcatat 43116503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 66
Target Start/End: Complemental strand, 49465782 - 49465754
Alignment:
Q  38 tatttttataacaaaagataaaataaagt 66  Q
    |||||||||||||||||||||||||||||    
T  49465782 tatttttataacaaaagataaaataaagt 49465754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 51455912 - 51455869
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagt 66  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||||    
T  51455912 gtgtttatgtaaaaattatttt-ataacaaaagataaaataaagt 51455869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 53457335 - 53457371
Alignment:
Q  45 ataacaaaagataaaataaagtcaaacagttttcata 81  Q
    |||||||||||||||||||||||||||  ||||||||    
T  53457335 ataacaaaagataaaataaagtcaaactattttcata 53457371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 3458604 - 3458652
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  3458604 aagttatttttataacaaaagataaaataaagtcaaacttttttcatat 3458652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 5998836 - 5998788
Alignment:
Q  23 tgtttatataaaagttatttttataacaaaagataaaataaagtcaaac 71  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  5998836 tgtttatatataagctatttttataacaaaagataaaataaagttaaac 5998788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 17952832 - 17952776
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||||||  |||||||||    
T  17952832 ttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatat 17952776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 18962157 - 18962113
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  18962157 tatttttataacaaaagataaaataaagttaaactgttttcatat 18962113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 28803637 - 28803581
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||| | ||||||||    
T  28803637 ttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatat 28803581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 33192132 - 33192188
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||  ||||| ||||||| |||||||||||||||||||| ||||||||||    
T  33192132 ttatataaaaactatttctataacataagataaaataaagtcaaactgttttcatat 33192188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 5045292 - 5045245
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaa 69  Q
    |||||||| || ||| ||||||||||||||||||||||||||||||||    
T  5045292 gtgtttatgtataagctatttttataacaaaagataaaataaagtcaa 5045245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 32098439 - 32098384
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||  |||||||||    
T  32098439 ttatatataagctatttctataacaaaagataaaataaagtcaaagtgttttcata 32098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 1939461 - 1939407
Alignment:
Q  28 atataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||||| ||||||||||||||||||||||| ||||  |||||||||    
T  1939461 atatataagttatttctataacaaaagataaaataaagtgaaactattttcatat 1939407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 9878813 - 9878768
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||    
T  9878813 ttatataaaagctatttctataacaaaagataaaataaactcaaac 9878768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 26167698 - 26167731
Alignment:
Q  39 atttttataacaaaagataaaataaagtcaaaca 72  Q
    ||||||||||||||||||||||||||||||||||    
T  26167698 atttttataacaaaagataaaataaagtcaaaca 26167731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 3423903 - 3423855
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    |||||||| || ||||||||||| || ||||||||||||||||||||||    
T  3423903 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 3423855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 10143119 - 10143167
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||| ||||    
T  10143119 aagttatttctataacaaaagataaaattaagtcaaactgtttttatat 10143167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 14666495 - 14666543
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||| ||||||||||||||||||||||||||| | ||||||||    
T  14666495 aagttgttttgataacaaaagataaaataaagtcaaactgatttcatat 14666543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 29628873 - 29628837
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaata 62  Q
    ||||||||||||||||| |||||||||||||||||||    
T  29628873 ttatataaaagttatttctataacaaaagataaaata 29628837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 30537662 - 30537602
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||  ||| ||||| |||||| |||||| | |||||||||||||||||||||||    
T  30537662 gtgtttatatgtaagctatttctataactaaagatcatataaagtcaaacagttttcatat 30537602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 31461377 - 31461421
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||    
T  31461377 ttatatataagctatttctataacaaaagataaaataaagtcaaa 31461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 7282953 - 7283012
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    |||||||| || ||| ||||||||||| |||||| ||||| ||||||||| |||||||||    
T  7282953 gtgtttatgtataagctatttttataagaaaagaaaaaatgaagtcaaactgttttcata 7283012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 70
Target Start/End: Original strand, 6546931 - 6546961
Alignment:
Q  40 tttttataacaaaagataaaataaagtcaaa 70  Q
    |||||||||||||||||||||||||||||||    
T  6546931 tttttataacaaaagataaaataaagtcaaa 6546961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 33256697 - 33256735
Alignment:
Q  44 tataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  33256697 tataacaatagataaaataaagtcaaactgttttcatat 33256735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 14209235 - 14209272
Alignment:
Q  45 ataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  14209235 ataacaaaagataaaataaattcaaactgttttcatat 14209272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 29729876 - 29729917
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttca 79  Q
    |||||||||||||||||||||| |||||| |||| |||||||    
T  29729876 tatttttataacaaaagataaattaaagtgaaactgttttca 29729917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 31740083 - 31740034
Alignment:
Q  33 aaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||| ||||| |||||| |||||||||||||||||||||  |||||||||    
T  31740083 aaagctatttctataactaaagataaaataaagtcaaactattttcatat 31740034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 32615423 - 32615370
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttca 79  Q
    ||||||| |||| |||| |||||||||||||||| |||| |||||| |||||||    
T  32615423 ttatatataagtgatttctataacaaaagataaactaaaatcaaactgttttca 32615370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 36863732 - 36863658
Alignment:
Q  50 aaaagataaaataaagtcaaacagttttcatatgagtaaattatacattgttttcataa-ccatcttggagagtttatg 127  Q
    ||||||||||||||||||||||| |||| |||    ||| ||||| ||||||||||||| | ||||||||||| |||||    
T  36863732 aaaagataaaataaagtcaaacaatttttata----taagttataaattgttttcataagctatcttggagagcttatg 36863658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 43199193 - 43199226
Alignment:
Q  37 ttatttttataacaaaagataaaataaagtcaaa 70  Q
    |||||| |||||||||||||||||||||||||||    
T  43199193 ttatttatataacaaaagataaaataaagtcaaa 43199226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 6988062 - 6988098
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  6988062 aagttttttctataacaaaagataaaataaagtcaaa 6988098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 13630404 - 13630356
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| | || |||||||||| |||||||||||| ||||||||||    
T  13630404 aagttatttctctatcaaaagataagataaagtcaaactgttttcatat 13630356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 33576715 - 33576675
Alignment:
Q  36 gttatttttataacaaaagataaaataaagtcaaacagttt 76  Q
    ||||||| |||||||||||||| ||||||||||||| ||||    
T  33576715 gttatttctataacaaaagatacaataaagtcaaactgttt 33576675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 34055020 - 34054976
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||||||||| ||||| |||| |||||    
T  34055020 tatttctataacaaaagataaaataaaggcaaactgtttacatat 34054976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 34339853 - 34339889
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  34339853 aagttgtttttaaaacaaaagataaaataaagtcaaa 34339889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 37053545 - 37053589
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||| || ||||||||||||||||| ||||||||||    
T  37053545 tatttctataacagaaaataaaataaagtcaaactgttttcatat 37053589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 38239686 - 38239638
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    |||||||| || ||| ||||| |||||||||||||||||| ||||||||    
T  38239686 gtgtttatgtataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 40837547 - 40837503
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||| ||||||||||  ||||||||||    
T  40837547 tatttctataacaaaagataaattaaagtcaaattgttttcatat 40837503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 42817497 - 42817445
Alignment:
Q  36 gttatttttataacaaaagataaaataaagtcaaacagttttcatatgagtaa 88  Q
    ||||||| |||| ||||||||||||| ||||||| | |||||||||| |||||    
T  42817497 gttatttctataccaaaagataaaatgaagtcaagctgttttcatataagtaa 42817445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 38561661 - 38561710
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaac 71  Q
    |||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  38561661 gtgtctatatataagttatttatataacaaaagataaaataaagtcaaac 38561710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 41620422 - 41620378
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||    
T  41620422 ttatatataagttatttttgtaacaaaagataaaataaagtcaaa 41620378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 34563189 - 34563244
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    ||||||| ||||||||| ||| ||||| ||||||||||||||||||| ||||||||    
T  34563189 ttatatataagttatttctatgacaaaggataaaataaagtcaaacaattttcata 34563244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 40728541 - 40728498
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagtttt 77  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  40728541 aagttatttctataacaaaagataaaataaagtcaaactgtttt 40728498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 1892356 - 1892302
Alignment:
Q  12 tagcataggtgtgtttatataaaagttatttttataacaaaagataaaataaagt 66  Q
    |||||||  |||||||||||| ||| ||||||||||||||||| |||||||||||    
T  1892356 tagcatatctgtgtttatatataagctatttttataacaaaaggtaaaataaagt 1892302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 26820146 - 26820183
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  26820146 aagttatttctataacaaaagataaaataaagtcaaac 26820183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 1664318 - 1664362
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagt 66  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||    
T  1664318 gtgtttatatataagctatttttataacaaaaggtaaaataaagt 1664362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 6918314 - 6918258
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttc 78  Q
    |||||| |||| ||| ||||| ||||| |||||||||||||||||||||| ||||||    
T  6918314 gtgtttgtatataagctatttatataataaaagataaaataaagtcaaactgttttc 6918258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 29699201 - 29699237
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||| |||||||||||||||||||||||||||    
T  29699201 aagttatttctataacaaaagataaaataaagtcaaa 29699237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 8799354 - 8799389
Alignment:
Q  36 gttatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8799354 gttatttctataacaaaagataaaataaagtcaaac 8799389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 3945209 - 3945251
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaa 64  Q
    ||||||||||| |||||||||  ||||||||||||||||||||    
T  3945209 gtgtttatatataagttatttcaataacaaaagataaaataaa 3945251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 6950275 - 6950317
Alignment:
Q  40 tttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||    
T  6950275 tttttataacaaaagataaagtaaagacaaactgttttcatat 6950317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 10437837 - 10437875
Alignment:
Q  39 atttttataacaaaagataaaataaagtcaaacagtttt 77  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  10437837 atttctataacaaaagataaaataaagtcaaactgtttt 10437875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 11494102 - 11494148
Alignment:
Q  36 gttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||| |||||||||||||| ||||||||||||  |||||||||    
T  11494102 gttattttcataacaaaagataacataaagtcaaacttttttcatat 11494148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 40280335 - 40280281
Alignment:
Q  27 tatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    |||||| ||||||||| || |||||||||||||||||||| |||  |||||||||    
T  40280335 tatatataagttatttctacaacaaaagataaaataaagtaaaattgttttcata 40280281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 42237539 - 42237497
Alignment:
Q  40 tttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||||||||||||| |||  ||||||||||    
T  42237539 tttttataacaaaagataaaataaagttaaattgttttcatat 42237497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 11119118 - 11119085
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  11119118 tatttctataacaaaagataaaataaagtcaaac 11119085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 12225022 - 12224973
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatatg 83  Q
    ||||||||| ||  ||||||||||||||||||||||||  ||||||||||    
T  12225022 aagttatttctaagacaaaagataaaataaagtcaaactattttcatatg 12224973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 20672729 - 20672762
Alignment:
Q  44 tataacaaaagataaaataaagtcaaacagtttt 77  Q
    |||||||||||||||||||||||||||| |||||    
T  20672729 tataacaaaagataaaataaagtcaaactgtttt 20672762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 31315572 - 31315539
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||||||||| ||||||||||||||||||||||    
T  31315572 tatttttataataaaagataaaataaagtcaaac 31315539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 35298589 - 35298556
Alignment:
Q  46 taacaaaagataaaataaagtcaaacagttttca 79  Q
    |||||||||||||||||||| |||||||||||||    
T  35298589 taacaaaagataaaataaagccaaacagttttca 35298556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 39392780 - 39392747
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  39392780 tatttctataacaaaagataaaataaagtcaaac 39392747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 1666980 - 1667024
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagt 66  Q
    ||||||||||| ||| ||||||||||||||||| | |||||||||    
T  1666980 gtgtttatatataagctatttttataacaaaaggtcaaataaagt 1667024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 2364592 - 2364560
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    |||||||||| ||||||||||||||||||||||    
T  2364592 tatttttatagcaaaagataaaataaagtcaaa 2364560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 2699241 - 2699301
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||| |||||| ||||||||| || ||||||| |||||||||||| ||||  |||||||||    
T  2699241 gtgtctatatataagttatttctacaacaaaatataaaataaagttaaactattttcatat 2699301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 11569578 - 11569546
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    |||||||||||||||||||||||||||| ||||    
T  11569578 tatttttataacaaaagataaaataaagacaaa 11569546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 12361131 - 12361187
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||| ||||||||| |||||  ||||||||||| ||||||||  ||||||||||    
T  12361131 ttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatat 12361187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 14482153 - 14482185
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| |||||||||||||||||||||||||||    
T  14482153 tatttctataacaaaagataaaataaagtcaaa 14482185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 26370939 - 26370971
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    |||||||| ||||||||||||||||||||||||    
T  26370939 tatttttacaacaaaagataaaataaagtcaaa 26370971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 27728140 - 27728096
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||| ||||||||||||||||||||||  |||||||||    
T  27728140 tatttctataaaaaaagataaaataaagtcaaactattttcatat 27728096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 34788546 - 34788502
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| || ||||||||||||||||||||| |||| |||||    
T  34788546 tatttttatgaccaaagataaaataaagtcaaactgtttccatat 34788502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 7243595 - 7243639
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||    
T  7243595 tatttttataacaaaagataaaataacgtcaaacagtttttatat 7243639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 39591590 - 39591542
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  39591590 aagttatttctataacaaaagataaaataaagtcaaattgttttcatat 39591542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 1373666 - 1373615
Alignment:
Q  31 taaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||| |||||||||||| |||||||||||  |||||||||    
T  1373666 taaaagttatttttatgacaaaagataaattaaagtcaaacttttttcatat 1373615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 5939019 - 5939074
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagtttt 77  Q
    |||||||| || |||||||||||||||||||| || ||||||||||||||| ||||    
T  5939019 gtgtttatgtataagttatttttataacaaaaaattaaataaagtcaaacaatttt 5939074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 5006622 - 5006584
Alignment:
Q  44 tataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  5006622 tataacaaaagataaaataaagtcaaactgttttcatat 5006584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 5276175 - 5276216
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttca 79  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  5276175 tatttttataacaaaagataacataaagtcaaaccgttttca 5276216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 17989139 - 17989098
Alignment:
Q  41 ttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  17989139 ttttataacaaaatataaaataaagtcaaactgttttcatat 17989098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 1417215 - 1417259
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||    
T  1417215 tatttatataacaaaagataaaataaagtcaaattgttttcatat 1417259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 5715173 - 5715117
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttc 78  Q
    |||||| |||| ||| ||||| |||||| |||||||||||||||||||||| |||||    
T  5715173 gtgtttctatataagctatttctataacgaaagataaaataaagtcaaacaattttc 5715117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 42656454 - 42656498
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||    
T  42656454 ttatatataagctatttctataacaaaagataaaataaagtcaaa 42656498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 2999142 - 2999181
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagtttt 77  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  2999142 tatttctataacaaaagataaaataaagtcaaaccgtttt 2999181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 3241380 - 3241435
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    ||||||| ||| ||||| |||||||||| | ||||||||||||||| |||||||||    
T  3241380 ttatatagaagctatttctataacaaaataaaaaataaagtcaaactgttttcata 3241435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 30133984 - 30134031
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaa 69  Q
    |||||||| || ||| |||||||| |||||||||||||||||||||||    
T  30133984 gtgtttatgtataagctatttttacaacaaaagataaaataaagtcaa 30134031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 44239095 - 44239056
Alignment:
Q  42 tttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  44239095 tttataacaaaagataaaataaagtcaaaatgttttcata 44239056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 8680929 - 8680975
Alignment:
Q  24 gtttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    |||||| || ||||||||||| |||||||||||| ||||||||||||    
T  8680929 gtttatgtataagttatttttgtaacaaaagatataataaagtcaaa 8680975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 9527203 - 9527165
Alignment:
Q  44 tataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  9527203 tataacaaaagatataataaagtcaaactgttttcatat 9527165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 45777284 - 45777246
Alignment:
Q  44 tataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatat 45777246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 47004022 - 47004084
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatatga 84  Q
    ||||||||||  ||| ||||| |||||||| |||||||||||||||||||  |||| ||||||    
T  47004022 gtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttttatatga 47004084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 6630547 - 6630584
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaac 71  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  6630547 aagttatttttacaacaaaagataaaataaagttaaac 6630584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 7623085 - 7623118
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtc 67  Q
    ||||||||||||||||||||| ||||||||||||    
T  7623085 aagttatttttataacaaaaggtaaaataaagtc 7623118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 31341145 - 31341178
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  31341145 tatttgtataacaaaagataaaataaagtcaaac 31341178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 35809039 - 35808990
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaac 71  Q
    |||||||| || ||| ||||| ||||||||||||||||||| ||||||||    
T  35809039 gtgtttatgtataagctatttctataacaaaagataaaatatagtcaaac 35808990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 2727479 - 2727435
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||||||||| |||||  |||||||||    
T  2727479 tatttctataacaaaagataaaataaaggcaaactcttttcatat 2727435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 4966095 - 4966151
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||| |||||||||  | |||||| ||||||||||  |||||||||||||||||    
T  4966095 ttatatataagttatttccacaacaaaggataaaataatatcaaacagttttcatat 4966151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 7100738 - 7100706
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||||||||||||||||| |||||||||    
T  7100738 tatttttataacaaaagataaaaaaaagtcaaa 7100706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 8445237 - 8445269
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    |||||||||||||||||||||||||||| ||||    
T  8445237 tatttttataacaaaagataaaataaagacaaa 8445269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 11208388 - 11208444
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||| ||| || || || |||||||||||||||||| |||||| ||||||||||    
T  11208388 ttatatataagataattctacaacaaaagataaaataaactcaaaccgttttcatat 11208444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 12835056 - 12835012
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| || ||||||||||||||||||||||||  ||||||||||    
T  12835056 tatttctacaacaaaagataaaataaagtcaaattgttttcatat 12835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 21853247 - 21853207
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagt 66  Q
    ||||||| ||||||||| ||| |||||||||||||||||||    
T  21853247 ttatatataagttatttctattacaaaagataaaataaagt 21853207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 23918904 - 23918952
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||| | ||| |||||||||||||||||||||||  ||||||||||    
T  23918904 aagttatctctattacaaaagataaaataaagtcaaattgttttcatat 23918952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 24973883 - 24973927
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    |||| |||||| ||||| ||||||||||||||||||||| |||||    
T  24973883 ttatgtaaaagctatttctataacaaaagataaaataaattcaaa 24973927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 29363473 - 29363513
Alignment:
Q  42 tttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||| |||| |||||||||||||||||||| ||||||||||    
T  29363473 tttacaacagaagataaaataaagtcaaactgttttcatat 29363513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 30160998 - 30160966
Alignment:
Q  49 caaaagataaaataaagtcaaacagttttcata 81  Q
    ||||||||||||||||||||||| |||||||||    
T  30160998 caaaagataaaataaagtcaaactgttttcata 30160966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 30456569 - 30456525
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| || ||||||||||||||||||||||||  ||||||||||    
T  30456569 tatttctaaaacaaaagataaaataaagtcaaattgttttcatat 30456525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 33894574 - 33894617
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||    
T  33894574 tatttctataacaaaagataaaat-aagtcaaactgttttcatat 33894617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 35536058 - 35536102
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||| |||||||||||||||||||  ||||||||||    
T  35536058 tatttctataacataagataaaataaagtcaaattgttttcatat 35536102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 45593830 - 45593794
Alignment:
Q  46 taacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  45593830 taacaaaacataaaataaagtcaaactgttttcatat 45593794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 46281254 - 46281218
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  46281254 aagttatttctataacaaaaaataaaataaagtcaaa 46281218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 2027525 - 2027481
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||||||||||||||||||||  |||||||||    
T  2027525 tatttttataacaaaagataaaataaagtcaaactattttcatat 2027481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 5328921 - 5328958
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  5328921 aagttatttctataacaaaagataaaataaagtcaaac 5328958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 24836331 - 24836286
Alignment:
Q  25 tttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||    
T  24836331 tttatgtataagttatttctataacaaaagataaaataaagtcaaa 24836286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 2206537 - 2206569
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagt 66  Q
    |||||||||||||||||||||||||||||||||    
T  2206537 aagttatttttataacaaaagataaaataaagt 2206569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 13360686 - 13360734
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatatgagt 86  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||| ||||    
T  13360686 tatttctataacaaaatataaaataaagtcaagcagttttcatacgagt 13360734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 28531664 - 28531628
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||| |||||||||||||||||||||||||||    
T  28531664 aagttatttatataacaaaagataaaataaagtcaaa 28531628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 3181182 - 3181143
Alignment:
Q  43 ttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  3181182 ttattacaaaagataaaataaagtcaaaccgttttcatat 3181143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 27857317 - 27857364
Alignment:
Q  29 tataaaagttatttttataacaaaagataaaataaagtcaaacagttt 76  Q
    |||| |||||| |||| |||||||||||||||||||||||||| ||||    
T  27857317 tatataagttacttttgtaacaaaagataaaataaagtcaaactgttt 27857364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 85
Target Start/End: Original strand, 26491618 - 26491672
Alignment:
Q  31 taaaagttatttttataacaaaagataaaataaagtcaaacagttttcatatgag 85  Q
    ||||||| |||| |||| ||||||||||||||||||||  | |||||||||||||    
T  26491618 taaaagtcatttctatagcaaaagataaaataaagtcatcctgttttcatatgag 26491672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 30004850 - 30004896
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcat 80  Q
    ||||||||| |||||||||| ||||| ||||| ||||||||||||||    
T  30004850 aagttatttctataacaaaaaataaactaaaggcaaacagttttcat 30004896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 32975913 - 32975967
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttt 76  Q
    |||||||| || ||||||||| | |||||||| ||||||||||||||||| ||||    
T  32975913 gtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgttt 32975967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 1497943 - 1497980
Alignment:
Q  49 caaaagataaaataaagtcaaacagttttcatatgagt 86  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  1497943 caaaaggtaaaataaagtcaaactgttttcatatgagt 1497980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 7713983 - 7714020
Alignment:
Q  45 ataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  7713983 ataacaaaagataaaataaagtcaaattgttttcatat 7714020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 28660879 - 28660813
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatatgagtaaattatacattgttttcataa 108  Q
    |||||||||||||| |||||||||||||| |||   ||||||||    ||||||||| |||||||||||||    
T  28660879 tatttttataacaatagataaaataaagttaaattattttcata----taaattataaattgttttcataa 28660813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 29958029 - 29957988
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttca 79  Q
    ||||||||||||||||| |||||||||||| ||| |||||||    
T  29958029 tatttttataacaaaaggtaaaataaagtcgaactgttttca 29957988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 30865433 - 30865466
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  30865433 tatttctataacaaaagataaaataaagtcaaac 30865466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 33068684 - 33068639
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttca 79  Q
    ||||||||| ||||||||||||||||||||  |||||| |||||||    
T  33068684 aagttatttctataacaaaagataaaataatatcaaactgttttca 33068639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 1402947 - 1402991
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||||||||||||||||||| ||||  |||||||||    
T  1402947 tatttctataacaaaagataaaataaagttaaactattttcatat 1402991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 3171550 - 3171506
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||||||||||| ||||| ||| ||||| ||||    
T  3171550 tatttttataacaaaagataaaattaagtcgaactgttttaatat 3171506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 4248897 - 4248941
Alignment:
Q  26 ttatataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||| ||| |||||  ||||||||||||||||||||||||||    
T  4248897 ttatatataagctatttcaataacaaaagataaaataaagtcaaa 4248941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 4420574 - 4420606
Alignment:
Q  44 tataacaaaagataaaataaagtcaaacagttt 76  Q
    |||||||||||||||||||||||||||| ||||    
T  4420574 tataacaaaagataaaataaagtcaaactgttt 4420606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 5551413 - 5551445
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| |||||||||||||||||||||||||||    
T  5551413 tatttatataacaaaagataaaataaagtcaaa 5551445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 6016498 - 6016466
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagt 66  Q
    |||||||||| ||||||||||||||||||||||    
T  6016498 aagttattttcataacaaaagataaaataaagt 6016466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 7785865 - 7785817
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||| || |||| |||||||||||||||||||||||  |||||||||    
T  7785865 aagttacttatataccaaaagataaaataaagtcaaactcttttcatat 7785817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 10154184 - 10154216
Alignment:
Q  50 aaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||||||||| ||||||||||    
T  10154184 aaaagataaaataaagtcaaactgttttcatat 10154216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 22742317 - 22742361
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||||| |||||||||||||||||  ||||||||||    
T  22742317 tatttgtataacaaaggataaaataaagtcaaattgttttcatat 22742361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 29274348 - 29274304
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||| ||||||||||||||||||||||  ||||||||||    
T  29274348 tatttctatagcaaaagataaaataaagtcaaattgttttcatat 29274304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 14295457 - 14295501
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||    
T  14295457 tatttctataacaaaagataaaataaagtcaaactgttttcatat 14295501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 28586885 - 28586841
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||    
T  28586885 tatttctataacaaaagataaaataaagtcaaactgttttcatat 28586841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 35135797 - 35135737
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||| || ||| ||||| ||||||||||||||||||||||||||||  |||||||||    
T  35135797 gtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatat 35135737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 11615449 - 11615491
Alignment:
Q  28 atataaaagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  11615449 atatataagctatttttataacaaaagataaaataaagtcaaa 11615491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 29117051 - 29117009
Alignment:
Q  36 gttatttttataacaaaagataaaataaagtcaaacagttttc 78  Q
    ||||||| |||||||||||||||||||||||||||| ||||||    
T  29117051 gttatttctataacaaaagataaaataaagtcaaactgttttc 29117009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 583889 - 583848
Alignment:
Q  41 ttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  583889 ttttataacagaagataaaataaagtcaaactgttttcatat 583848  T

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Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 37063193 - 37063149
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  37063193 tatttctataacaaaagataaaataaagtcaaactattttcatat 37063149  T

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Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 42181211 - 42181167
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||    
T  42181211 tatttttataacaaaagataaaacaaagtcaaatggttttcatat 42181167  T

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Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 985582 - 985625
Alignment:
Q  36 gttatttttataacaaaagataaaataaagtcaaacagttttca 79  Q
    |||||||  ||||||||||||||||||||||||||| |||||||    
T  985582 gttatttccataacaaaagataaaataaagtcaaactgttttca 985625  T

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Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 7096246 - 7096203
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||    
T  7096246 tatttctataacaaaagataaaataaagtcaaaccattttcata 7096203  T

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Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 37526325 - 37526274
Alignment:
Q  31 taaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||| ||||| |||||||||||| || ||||| |||||||||||    
T  37526325 taaaagttatttctataataaaagataaaatcaaatcaaaaagttttcatat 37526274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 37690763 - 37690712
Alignment:
Q  31 taaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||| ||||| |||||||||||| || ||||| |||||||||||    
T  37690763 taaaagttatttctataataaaagataaaatcaaatcaaaaagttttcatat 37690712  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 10303752 - 10303794
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcat 80  Q
    ||||| |||||||||||||||||||||||||||  ||||||||    
T  10303752 tatttctataacaaaagataaaataaagtcaaattgttttcat 10303794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 37588485 - 37588435
Alignment:
Q  32 aaaagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||| ||||| |||||||||||| || ||||| |||||||||||    
T  37588485 aaaagttatttctataataaaagataaaatcaaatcaaaaagttttcatat 37588435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 39823241 - 39823207
Alignment:
Q  37 ttatttttataacaaaagataaaataaagtcaaac 71  Q
    |||||| ||||||||||||||||||||||||||||    
T  39823241 ttatttatataacaaaagataaaataaagtcaaac 39823207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 1019563 - 1019523
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttc 78  Q
    |||||| ||||||||||||||| ||||||||||| ||||||    
T  1019563 tattttaataacaaaagataaactaaagtcaaactgttttc 1019523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 20982254 - 20982210
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| ||||||||| |||||||||||||||| | ||||||||||    
T  20982254 tatttctataacaaaggataaaataaagtcaacccgttttcatat 20982210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 32969240 - 32969204
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  32969240 aagttgtttctataacaaaagataaaataaagtcaaa 32969204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 35095902 - 35095870
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||| |||||||||||||||||||||||||||    
T  35095902 tatttctataacaaaagataaaataaagtcaaa 35095870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 36639472 - 36639516
Alignment:
Q  37 ttatttttataacaaaagataaaataaagtcaaacagttttcata 81  Q
    |||| ||||||||||||||||||||||| |||||  |||||||||    
T  36639472 ttatctttataacaaaagataaaataaaatcaaaatgttttcata 36639516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 36646191 - 36646231
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttc 78  Q
    ||||||||||||| |||||||| ||||||||||| ||||||    
T  36646191 tatttttataacataagataaactaaagtcaaactgttttc 36646231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 39750102 - 39750138
Alignment:
Q  46 taacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||||||||||||||||||||  |||||||||    
T  39750102 taacaaaagataaaataaagtcaaactattttcatat 39750138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 9898 - 9850
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| |||||||||| ||||||| |||||||| |||||||||||    
T  9898 aagttatttctataacaaaaaataaaattaagtcaaaaagttttcatat 9850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 6759 - 6803
Alignment:
Q  22 gtgtttatataaaagttatttttataacaaaagataaaataaagt 66  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||    
T  6759 gtgtttatatataagctatttttataacaaaaggtaaaataaagt 6803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 51515 - 51563
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    |||||||||||||||||||| |||||||||||| |||  ||||||||||    
T  51515 aagttatttttataacaaaatataaaataaagttaaattgttttcatat 51563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 20130 - 20174
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||||    
T  20130 tatttctataaccaaagataaaataaagtcaaacagttatcatat 20174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 27523 - 27571
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaacagttttcatat 82  Q
    ||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  27523 aagttatttctataacagaagataaaataaagtcaaattgttttcatat 27571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 1193 - 1160
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  1193 tatttctataacaaaagataaaataaagtcaaac 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 2782 - 2815
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaac 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  2782 tatttctataacaaaagataaaataaagtcaaac 2815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 63404 - 63372
Alignment:
Q  38 tatttttataacaaaagataaaataaagtcaaa 70  Q
    |||||||||||||||||||||||||||| ||||    
T  63404 tatttttataacaaaagataaaataaagacaaa 63372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 58216 - 58180
Alignment:
Q  34 aagttatttttataacaaaagataaaataaagtcaaa 70  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  58216 aagttatttatataacaaaagataacataaagtcaaa 58180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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