View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9908_4 (Length: 466)

Name: NF9908_4
Description: NF9908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9908_4
NF9908_4
[»] scaffold0140 (1 HSPs)
scaffold0140 (16-465)||(33757-34206)
[»] chr8 (25 HSPs)
chr8 (253-327)||(6849255-6849329)
chr8 (253-322)||(44380613-44380682)
chr8 (250-318)||(12697716-12697784)
chr8 (253-312)||(36497664-36497723)
chr8 (253-327)||(6004947-6005021)
chr8 (253-327)||(12045647-12045721)
chr8 (253-318)||(9985681-9985746)
chr8 (253-308)||(14531624-14531679)
chr8 (265-327)||(30578269-30578331)
chr8 (253-315)||(35500959-35501021)
chr8 (253-315)||(40380284-40380346)
chr8 (260-322)||(40464966-40465028)
chr8 (253-318)||(6161951-6162016)
chr8 (250-315)||(14228707-14228772)
chr8 (253-318)||(21648934-21648999)
chr8 (253-322)||(27630900-27630969)
chr8 (253-294)||(31731450-31731491)
chr8 (260-321)||(33415711-33415772)
chr8 (253-322)||(37562140-37562209)
chr8 (253-318)||(42012593-42012658)
chr8 (266-321)||(145767-145823)
chr8 (265-321)||(1332468-1332524)
chr8 (254-314)||(22999559-22999619)
chr8 (253-321)||(34996360-34996428)
chr8 (253-321)||(42443107-42443175)
[»] chr5 (29 HSPs)
chr5 (253-327)||(29803228-29803302)
chr5 (248-322)||(41460114-41460188)
chr5 (253-321)||(17063868-17063936)
chr5 (253-327)||(7144580-7144654)
chr5 (265-319)||(38690968-38691022)
chr5 (253-322)||(26627333-26627402)
chr5 (248-327)||(15639383-15639462)
chr5 (272-322)||(3960168-3960218)
chr5 (248-318)||(12718383-12718453)
chr5 (253-322)||(582866-582935)
chr5 (253-322)||(5996670-5996739)
chr5 (265-322)||(19437272-19437329)
chr5 (253-325)||(16292245-16292316)
chr5 (260-315)||(32379935-32379990)
chr5 (248-318)||(12779609-12779679)
chr5 (253-315)||(14914375-14914437)
chr5 (253-327)||(20040792-20040865)
chr5 (253-327)||(34428163-34428237)
chr5 (253-318)||(1107984-1108049)
chr5 (253-322)||(2456029-2456098)
chr5 (254-315)||(3154649-3154710)
chr5 (253-318)||(6538873-6538938)
chr5 (253-318)||(8897385-8897450)
chr5 (253-322)||(18638824-18638893)
chr5 (253-322)||(31025004-31025073)
chr5 (253-322)||(34400621-34400690)
chr5 (253-318)||(36572694-36572759)
chr5 (280-321)||(39032821-39032862)
chr5 (253-321)||(34952406-34952474)
[»] chr4 (35 HSPs)
chr4 (253-327)||(44272804-44272878)
chr4 (253-321)||(11012144-11012212)
chr4 (253-321)||(42853942-42854010)
chr4 (248-321)||(23220333-23220406)
chr4 (253-315)||(3475872-3475934)
chr4 (253-327)||(18874916-18874989)
chr4 (253-327)||(23094379-23094453)
chr4 (253-319)||(35017156-35017222)
chr4 (253-307)||(47014942-47014996)
chr4 (253-327)||(54801001-54801075)
chr4 (260-321)||(8455871-8455932)
chr4 (253-318)||(41609682-41609747)
chr4 (253-318)||(51039119-51039184)
chr4 (248-296)||(12074470-12074518)
chr4 (254-318)||(37775430-37775494)
chr4 (253-329)||(46566932-46567008)
chr4 (248-315)||(925068-925135)
chr4 (250-289)||(52430877-52430916)
chr4 (248-322)||(14090049-14090123)
chr4 (248-318)||(25523201-25523271)
chr4 (260-314)||(25936250-25936304)
chr4 (248-322)||(34114116-34114190)
chr4 (253-287)||(45764422-45764456)
chr4 (249-318)||(51908577-51908647)
chr4 (253-318)||(12241061-12241126)
chr4 (251-316)||(12694433-12694498)
chr4 (248-321)||(18568815-18568888)
chr4 (265-322)||(18880800-18880857)
chr4 (253-318)||(22071499-22071564)
chr4 (278-319)||(24337358-24337399)
chr4 (253-318)||(33820339-33820404)
chr4 (253-322)||(46912798-46912867)
chr4 (253-318)||(53781840-53781904)
chr4 (250-322)||(40308441-40308513)
chr4 (253-321)||(52456927-52456994)
[»] chr3 (36 HSPs)
chr3 (248-322)||(37134605-37134679)
chr3 (253-327)||(45150260-45150334)
chr3 (253-327)||(7867705-7867779)
chr3 (253-327)||(36869831-36869905)
chr3 (253-322)||(36799401-36799470)
chr3 (273-329)||(40785691-40785747)
chr3 (248-315)||(50280093-50280160)
chr3 (253-327)||(1295335-1295409)
chr3 (253-327)||(1901920-1901994)
chr3 (253-327)||(1911366-1911440)
chr3 (253-319)||(28300650-28300716)
chr3 (253-322)||(462400-462469)
chr3 (253-322)||(12094388-12094457)
chr3 (248-319)||(14957834-14957905)
chr3 (248-327)||(50294106-50294185)
chr3 (253-327)||(275229-275303)
chr3 (253-327)||(41717266-41717340)
chr3 (253-327)||(45528936-45529010)
chr3 (248-318)||(51464275-51464345)
chr3 (253-322)||(7213-7282)
chr3 (260-321)||(622460-622521)
chr3 (260-321)||(32981121-32981182)
chr3 (265-322)||(35425671-35425728)
chr3 (273-322)||(42102260-42102309)
chr3 (272-321)||(43333670-43333719)
chr3 (253-322)||(43900756-43900825)
chr3 (253-318)||(47988488-47988553)
chr3 (253-318)||(47997775-47997840)
chr3 (253-318)||(48007062-48007127)
chr3 (253-322)||(52678576-52678645)
chr3 (253-321)||(27198160-27198228)
chr3 (253-321)||(34628070-34628138)
chr3 (260-300)||(35987258-35987298)
chr3 (273-321)||(42755678-42755726)
chr3 (253-321)||(44334801-44334869)
chr3 (272-312)||(55196530-55196570)
[»] chr1 (40 HSPs)
chr1 (248-322)||(20268512-20268586)
chr1 (253-321)||(30530574-30530642)
chr1 (253-327)||(40238441-40238515)
chr1 (254-327)||(5043096-5043169)
chr1 (253-322)||(23554754-23554823)
chr1 (253-321)||(31184284-31184352)
chr1 (247-327)||(32821632-32821712)
chr1 (253-321)||(34395919-34395987)
chr1 (261-321)||(47138030-47138090)
chr1 (253-321)||(50118896-50118964)
chr1 (253-327)||(9882653-9882727)
chr1 (253-327)||(25702209-25702283)
chr1 (253-327)||(30687055-30687129)
chr1 (248-318)||(31703481-31703551)
chr1 (253-322)||(43640984-43641051)
chr1 (253-322)||(7078499-7078568)
chr1 (253-322)||(30530398-30530467)
chr1 (278-322)||(44950420-44950464)
chr1 (250-322)||(48576504-48576576)
chr1 (249-321)||(52417530-52417602)
chr1 (266-321)||(18954300-18954355)
chr1 (272-327)||(51168762-51168817)
chr1 (253-315)||(18610776-18610838)
chr1 (273-327)||(21255779-21255833)
chr1 (280-318)||(24158680-24158718)
chr1 (253-327)||(25988978-25989052)
chr1 (253-327)||(27352633-27352707)
chr1 (253-319)||(33675903-33675969)
chr1 (278-327)||(6954310-6954359)
chr1 (253-322)||(11097883-11097952)
chr1 (253-318)||(18541054-18541119)
chr1 (253-322)||(26547237-26547306)
chr1 (253-318)||(30439253-30439318)
chr1 (272-329)||(34941912-34941969)
chr1 (250-327)||(36930748-36930824)
chr1 (253-322)||(49596238-49596307)
chr1 (253-321)||(12999822-12999890)
chr1 (253-321)||(48872382-48872450)
chr1 (253-321)||(51037980-51038048)
chr1 (250-321)||(51172307-51172376)
[»] chr7 (31 HSPs)
chr7 (253-322)||(37392046-37392115)
chr7 (246-327)||(26123362-26123444)
chr7 (253-329)||(4971293-4971369)
chr7 (248-321)||(40760770-40760841)
chr7 (253-322)||(22692087-22692156)
chr7 (248-321)||(28109955-28110028)
chr7 (250-327)||(34304672-34304749)
chr7 (253-322)||(45154539-45154607)
chr7 (253-321)||(40693528-40693596)
chr7 (272-327)||(44187713-44187768)
chr7 (253-327)||(8061738-8061812)
chr7 (248-318)||(42640841-42640911)
chr7 (253-322)||(26153649-26153717)
chr7 (253-322)||(44564722-44564790)
chr7 (254-322)||(5724042-5724110)
chr7 (250-322)||(5868301-5868373)
chr7 (277-321)||(43107637-43107681)
chr7 (272-319)||(5978601-5978648)
chr7 (249-327)||(18925991-18926067)
chr7 (253-319)||(28824506-28824572)
chr7 (253-318)||(30769664-30769727)
chr7 (253-315)||(37385239-37385301)
chr7 (272-322)||(46148188-46148238)
chr7 (253-307)||(47530305-47530359)
chr7 (253-322)||(16567319-16567388)
chr7 (253-322)||(16598274-16598343)
chr7 (253-322)||(17500700-17500769)
chr7 (253-322)||(17552445-17552514)
chr7 (253-318)||(19426583-19426648)
chr7 (278-318)||(35098785-35098825)
chr7 (260-308)||(46456647-46456695)
[»] chr6 (14 HSPs)
chr6 (253-321)||(12044335-12044403)
chr6 (253-327)||(9188938-9189012)
chr6 (253-327)||(32729892-32729966)
chr6 (260-327)||(30744247-30744314)
chr6 (266-318)||(14803376-14803428)
chr6 (253-329)||(20712070-20712145)
chr6 (253-316)||(35077126-35077190)
chr6 (253-315)||(6435039-6435101)
chr6 (253-315)||(29376721-29376783)
chr6 (253-322)||(11785358-11785427)
chr6 (253-318)||(21506339-21506404)
chr6 (253-321)||(8173312-8173380)
chr6 (278-322)||(18792431-18792475)
chr6 (253-289)||(32621804-32621840)
[»] chr2 (29 HSPs)
chr2 (253-327)||(1052490-1052564)
chr2 (253-318)||(9202519-9202584)
chr2 (253-318)||(36816419-36816484)
chr2 (272-327)||(6742404-6742459)
chr2 (253-319)||(14713989-14714055)
chr2 (253-327)||(23358573-23358647)
chr2 (253-327)||(30856810-30856884)
chr2 (253-327)||(36763518-36763591)
chr2 (254-308)||(43621961-43622015)
chr2 (253-298)||(3299128-3299173)
chr2 (253-321)||(546385-546453)
chr2 (253-321)||(7497991-7498059)
chr2 (250-322)||(35965575-35965647)
chr2 (253-327)||(8352838-8352912)
chr2 (272-322)||(14954598-14954648)
chr2 (253-327)||(15283244-15283318)
chr2 (248-322)||(28165127-28165201)
chr2 (265-318)||(39147780-39147834)
chr2 (253-322)||(2308321-2308390)
chr2 (253-322)||(3959897-3959966)
chr2 (253-318)||(6746220-6746285)
chr2 (246-295)||(22303199-22303248)
chr2 (253-322)||(42554779-42554848)
chr2 (278-322)||(4842519-4842563)
chr2 (253-321)||(6666023-6666091)
chr2 (282-322)||(9449414-9449454)
chr2 (260-296)||(20508384-20508420)
chr2 (250-321)||(27939157-27939229)
chr2 (253-321)||(37966588-37966655)
[»] scaffold0024 (1 HSPs)
scaffold0024 (253-322)||(60472-60541)
[»] scaffold0002 (1 HSPs)
scaffold0002 (253-327)||(440721-440795)
[»] scaffold0662 (1 HSPs)
scaffold0662 (253-307)||(1081-1135)
[»] scaffold0003 (1 HSPs)
scaffold0003 (253-327)||(337121-337195)
[»] scaffold0252 (1 HSPs)
scaffold0252 (251-295)||(8001-8045)
[»] scaffold0041 (1 HSPs)
scaffold0041 (253-319)||(34411-34477)
[»] scaffold0020 (1 HSPs)
scaffold0020 (248-322)||(155904-155978)
[»] scaffold0154 (1 HSPs)
scaffold0154 (253-322)||(4318-4387)
[»] scaffold0511 (1 HSPs)
scaffold0511 (278-322)||(11666-11710)


Alignment Details
Target: scaffold0140 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 16 - 465
Target Start/End: Complemental strand, 34206 - 33757
Alignment:
Q  16 atggggaggccaccttcaacatcaacctaacaaagtaggagataaaattgtttggtaaagtagcattacagcgacattgatcaaacatgaatctagcctc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34206 atggggaggccaccttcaacatcaacctaacaaagtaggagataaaattgtttggtaaagtagcattacagcgacattgatcaaacatgaatctagcctc 34107  T
Q  116 tccttccaaaatgtgcctaaagaacttcacaaaagcaaaattgatcctatcatgatgccggatgtttgttaccaccacactacgtaaccacctcttcaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34106 tccttccaaaatgtgcctaaagaacttcacaaaagcaaaattgatcctatcatgatgccggatgtttgttaccaccacactacgtaaccacctcttcaat 34007  T
Q  216 ttttgacatagagaaatggtttgctaaatctcttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34006 ttttgacatagagaaatggtttgctaaatctctagaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 33907  T
Q  316 tatattcctacta-taccnnnnnnnnncctcaatcaa-ttgtttttaaccataagnnnnnnnnnnnngaaggttgcctaaaaagttatcacaaaacatta 413  Q
    |||| |||||||| ||||          ||||||||| |||||||||||||||||            ||||||||| ||||||||||||||||||||||     
T  33906 tataatcctactattacctttttttt--ctcaatcaacttgtttttaaccataagaaaaagaaaaaagaaggttgcgtaaaaagttatcacaaaacattc 33809  T
Q  414 aacaaatactatcattactcaaatctctattctcttaggaaataccacccat 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33808 aacaaatactatcattactcaaatctctattctcttaggaaataccacccat 33757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 6849329 - 6849255
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  6849329 aaatgatatttatacaaccattttgtgacaacttttagacaactttatctttcatactcacattatattcttact 6849255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 44380682 - 44380613
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||| ||||||| ||||||||||||| ||| ||||| |||||||||||||    
T  44380682 aaatgatatttgtacaaccattttgtgacaacctttaaacaactttctctctcatactcacattatattc 44380613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 12697784 - 12697716
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    ||||||||| ||||||||||||||||||||| || |||| ||||||||| ||| ||| | |||||||||    
T  12697784 gaaaaatgatatttatacaactattttatgataatttttgaacaactttctctctcacactcacattat 12697716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 36497664 - 36497723
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattca 312  Q
    |||||| |||| |||||||||||| |||||||||||| |||||||| ||| |||||||||    
T  36497664 aaatgatatttgtacaactattttgtgacaacttttagacaactttctctctcatattca 36497723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 6004947 - 6005021
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||||| ||| |||||| ||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  6004947 aaatgatatttgtacaactactttgtgacaatttttagacaactttctctctcatactcacattatattcttact 6005021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 12045721 - 12045647
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||  |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  12045721 aaatgatatttgtacaaccatttagtgacaacttttagacaactttctctctcatactcacattatattcttact 12045647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 9985746 - 9985681
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||| |||||||||||||||||||| ||||| || ||| ||||| |||||||||    
T  9985746 aaatgatatttgtacatctattttatgacaacttttatacaacattctctctcatactcacattat 9985681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 14531624 - 14531679
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcata 308  Q
    |||||| |||| |||||||||||||||| |||||||  |||||||| |||||||||    
T  14531624 aaatgatatttgtacaactattttatgataacttttgtacaactttctctttcata 14531679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 30578269 - 30578331
Alignment:
Q  265 tacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| ||||| ||||||||||||||||||||| | | ||||| |||| |||||||| ||||    
T  30578269 tacaaccattttttgacaacttttaaacaactttctttctcatactcacgttatattcttact 30578331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 35501021 - 35500959
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||||| ||||||||||| | ||| ||||||||||  ||||||||||||| ||||| ||||||    
T  35501021 aaatgatatttatacaaccactttttgacaactttataacaactttatctctcatactcacat 35500959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 40380284 - 40380346
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||||| |||| |||| |||||||||||||||||||  |||||||| ||| ||||| ||||||    
T  40380284 aaatgatatttgtacatctattttatgacaacttttgtacaactttctctctcatactcacat 40380346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 40464966 - 40465028
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||||||||||| ||||||| || ||||  |||||||| ||| ||||| |||||||||||||    
T  40464966 atttatacaactactttatgataaatttttgacaactttctctctcatactcacattatattc 40465028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 6161951 - 6162016
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||| ||||||||||||| |||  |||||| | ||||||||| |||||||||    
T  6161951 aaatgatatttgtacaaccattttatgacaaccttttgacaactctctctttcatactcacattat 6162016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 14228707 - 14228772
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    ||||||||| |||| |||||||||||| ||| |||||||  |||||||| ||| ||||| ||||||    
T  14228707 gaaaaatgatatttgtacaactattttgtgataacttttgtacaactttctctctcatactcacat 14228772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 21648999 - 21648934
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||| | ||| ||||||||||| ||||||||| ||| ||||| |||||||||    
T  21648999 aaatgatatttgtacaaccaatttgtgacaactttttaacaactttctctctcatactcacattat 21648934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 27630900 - 27630969
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||| | |||||||||||| ||||  |||||||| ||| ||||| |||||||||||||    
T  27630900 aaatgatatttgtacatccattttatgacaattttttgacaactttctctctcatactcacattatattc 27630969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 31731491 - 31731450
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaa 294  Q
    |||||| ||||||||||||| |||||||||||||| ||||||    
T  31731491 aaatgatatttatacaactaatttatgacaactttgaaacaa 31731450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 33415772 - 33415711
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||| ||||||||||||||||||||| ||  |||||| | ||||| ||| ||||||||||||    
T  33415772 atttgtacaactattttatgacaactctttgacaactctctcttttatactcacattatatt 33415711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 37562209 - 37562140
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||||||| | |||||||||||| |||||||| ||| ||||| || ||| ||||||    
T  37562209 aaatgatatttgtacaactattatgtgacaacttttagacaactttctctctcatactcgcatgatattc 37562140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 42012658 - 42012593
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| ||||||||||||| ||||||| |||||||  |||||||| ||| ||||| |||| ||||    
T  42012658 aaatgatatttatacaactactttatgataactttttgacaactttctctctcatactcacgttat 42012593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 145823 - 145767
Alignment:
Q  266 acaactattttatgacaactttta-aacaactttatctttcatattcacattatatt 321  Q
    ||||||||||| ||||||||||||  |||| ||||| ||||||||||| ||||||||    
T  145823 acaactattttgtgacaacttttatgacaattttatgtttcatattcatattatatt 145767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 1332524 - 1332468
Alignment:
Q  265 tacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| ||||||| |||| ||||  |||||||| |||||||||||||||| |||||    
T  1332524 tacaaccattttataacaattttttgacaactttctctttcatattcacatgatatt 1332468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 22999619 - 22999559
Alignment:
Q  254 aatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcaca 314  Q
    ||||| |||| || || ||||||  |||||||||| ||||||||||||||||||| |||||    
T  22999619 aatgatatttttaaaattattttgcgacaacttttgaacaactttatctttcatactcaca 22999559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 34996428 - 34996360
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| | ||||| |||| ||||  |||||||| ||| ||||||||||||||||||    
T  34996428 aaatgatatttgtacaaccactttattacaattttttgacaactttctctctcatattcacattatatt 34996360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 42443107 - 42443175
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||  ||||  |||||||||||| |||||||| ||| ||||| ||||||||||||    
T  42443107 aaatgatatttgtacaatcatttagtgacaacttttagacaactttctctctcatactcacattatatt 42443175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 29803228 - 29803302
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  29803228 aaatgatatttgtacaactattttttgacaacttttaaacaactttctctctcatattcacattatattcttact 29803302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 322
Target Start/End: Original strand, 41460114 - 41460188
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||| |||||| ||||||||||  ||||| ||||||||||||||||||||||||| ||||| |||||||||||||    
T  41460114 ttgagaaatgatatttatacaatcattttttgacaacttttaaacaactttatctctcatactcacattatattc 41460188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 17063868 - 17063936
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||  ||||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  17063868 aaatgatatttgtacaatcattttttgacaacttttaaacaactttatctctcatactcacattatatt 17063936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 7144580 - 7144654
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||||||| ||||||||||||||||| ||| ||||| ||| ||||||||| ||||    
T  7144580 aaatgatatttgtacaaccattttatgataacttttaaacaactttctctctcatactcatattatattcttact 7144654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 38691022 - 38690968
Alignment:
Q  265 tacaactattttatgacaacttttaaacaactttatctttcatattcacattata 319  Q
    ||||| |||||| |||||| |||||||||||||| ||||||||||||||||||||    
T  38691022 tacaattattttgtgacaatttttaaacaactttctctttcatattcacattata 38690968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 26627333 - 26627402
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||||||||| |  ||||||||| |||||||| ||||||||| |||||||||||||    
T  26627333 aaatgatatttgtacaactattttttatcaacttttagacaactttctctttcatactcacattatattc 26627402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 15639383 - 15639462
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||| |||||| |||| |||||| ||||  |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  15639383 ttgagaaatgatatttgtacaaccatttggtgacaacttttagacaactttttctctcatactcacattatattcttact 15639462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 3960218 - 3960168
Alignment:
Q  272 attttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||| ||||||||||||||||||||||| | ||||| |||||||||||||    
T  3960218 attttttgacaacttttaaacaactttatatctcatactcacattatattc 3960168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 12718453 - 12718383
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||| |||||| |||| |||||| | ||| |||||||||||  |||||||||||| |||||||||||||||    
T  12718453 ttgagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttatctctcatattcacattat 12718383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 582935 - 582866
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||||||||| ||| ||||||||||||| ||| ||| ||||| ||| |||||||||    
T  582935 aaatgatatttttacaactattttgtgataacttttaaacaattttctctctcatactcatattatattc 582866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 5996670 - 5996739
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||||||||| | |||| ||||| |||| ||| ||| |||||||||||||||||||    
T  5996670 aaatgatatttgtacaactattttttaacaatttttagacaattttctctctcatattcacattatattc 5996739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 19437272 - 19437329
Alignment:
Q  265 tacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| ||||| ||| ||| ||||||||||||| ||| |||||||||||||||||||    
T  19437272 tacaaccattttgtgataacctttaaacaactttctctctcatattcacattatattc 19437329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 16292316 - 16292245
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattccta 325  Q
    |||||| |||| ||||| ||||| |||| ||||||| ||||||||| ||||||||| | ||||||||||||||    
T  16292316 aaatgatatttgtacaattattt-atgataactttttaacaactttctctttcatacttacattatattccta 16292245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 32379990 - 32379935
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||| |||||||| ||||||||||||||| ||||||||| ||| ||||| ||||||    
T  32379990 atttgtacaactagtttatgacaacttttgaacaactttctctctcatactcacat 32379935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 12779679 - 12779609
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||| |||||| |||| |||||| | ||| |||||||||||  |||||||||||| ||||| |||||||||    
T  12779679 ttgagaaatgatatttgtacaaccaatttgtgacaactttttgacaactttatctctcatactcacattat 12779609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 14914375 - 14914437
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||||| |||| |||||| ||||| |||||||||||  |||||||| |||| |||||||||||    
T  14914375 aaatgatatttgtacaaccattttgtgacaacttttggacaactttctcttacatattcacat 14914437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 20040792 - 20040865
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||  |||||||||||| |||||||| | ||||||| ||||||||||||| ||||    
T  20040792 aaatgatatttgtacaac-atttagtgacaacttttacacaactttctttttcatactcacattatattcttact 20040865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 34428163 - 34428237
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||||||||| |||||||||||| |||||||| | | | ||| |||||||| |||| ||||    
T  34428163 aaatgatatttgtacaactattttttgacaacttttagacaactttttttcttatactcacattagattcttact 34428237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 1107984 - 1108049
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| ||| |||||||| | |||||||||  |||||||||||| ||||| |||||||||    
T  1107984 aaatgatatttgtacgactattttgttacaacttttgtacaactttatctctcatactcacattat 1108049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 2456029 - 2456098
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| || |||||||||||||||| |||| ||||  |||||||| | | ||||| |||||||||||||    
T  2456029 aaatgatatctatacaactattttataacaattttttgacaactttctatctcatactcacattatattc 2456098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 3154710 - 3154649
Alignment:
Q  254 aatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    ||||| |||| |||||||||||||||| |||||||  |||||||| ||| ||||| ||||||    
T  3154710 aatgatatttgtacaactattttatgataacttttgtacaactttctctctcataatcacat 3154649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 6538873 - 6538938
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| ||||| |||||| ||| || ||||  |||||||| |||||||||||||||||||    
T  6538873 aaatgatatttgtacaattattttgtgataattttttgacaactttctctttcatattcacattat 6538938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 8897385 - 8897450
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||| ||||||||||||| |||  |||||| | ||||||||| |||||||||    
T  8897385 aaatgatatttgtacaaccattttatgacaaccttttgacaactctctctttcatactcacattat 8897450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 18638893 - 18638824
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| ||||  ||||| ||||||| |||||||||  |||| ||||||| ||||| |||||||||||||    
T  18638893 aaatgatatttgcacaaccattttattacaactttttgacaaatttatctctcatactcacattatattc 18638824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 31025073 - 31025004
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| |  ||||||||| |||| ||||||||| ||| ||||| |||||||||||||    
T  31025073 aaatgatatttgtacaaccacattatgacaattttttaacaactttctctctcatactcacattatattc 31025004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 34400621 - 34400690
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||  |||||||||||| |||| |||||| || ||| ||||| |||||||||||||    
T  34400621 aaatgatatttgtacaatcattttatgacaattttttaacaaccttctctctcatactcacattatattc 34400690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 36572694 - 36572759
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| || ||||||||| |||||||||||  |||||| | ||||||||| |||||||||    
T  36572694 aaatgatatttgtataactattttgtgacaactttttgacaactctctctttcatactcacattat 36572759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 39032862 - 39032821
Alignment:
Q  280 acaacttttaaacaactttatctttcatattcacattatatt 321  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||    
T  39032862 acaacttttaaacaactttatttttcatactcatattatatt 39032821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 34952474 - 34952406
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| | ||||| ||||| |||  |||||||| ||| ||||||||||||||||||    
T  34952474 aaatgatatttgtacaaccactttattacaacattttcacaactttctctctcatattcacattatatt 34952406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 44272878 - 44272804
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||| ||||    
T  44272878 aaatgatatttgtacaactattttttgacaacttttaaacaactttctctctcatactcacattatattcttact 44272804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 11012144 - 11012212
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| ||||||||||||||||| ||||||||||||| ||||| | ||||||||||    
T  11012144 aaatgatatttgtacaaccattttatgacaactttttaacaactttatctctcatacttacattatatt 11012212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 42853942 - 42854010
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||||||||| |||||||||||| |||||||| ||| ||||| ||||||||||||    
T  42853942 aaatgatatttgtacaactattttttgacaacttttagacaactttctctatcatactcacattatatt 42854010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 23220333 - 23220406
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||| |||||| |||| |||||| ||||| |||||||||||||| |||||||||| | ||| ||||||||||||    
T  23220333 ttgagaaatgatatttgtacaaccattttttgacaacttttaaataactttatctcttatactcacattatatt 23220406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 3475872 - 3475934
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||||| |||| |||||| |||||||||||||||||  |||||||| ||| ||||||||||||    
T  3475872 aaatgatatttgtacaaccattttatgacaacttttgtacaactttctctctcatattcacat 3475934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 18874989 - 18874916
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  18874989 aaatgatatttgtacaac-attttttgacaacttttagacaactttctctctcatactcacattatattcttact 18874916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 23094379 - 23094453
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||  ||||| ||| |||||||| |||||||| ||||||||||| ||||||||||| ||||    
T  23094379 aaatgatatttgtacaatcattttgtgataacttttagacaactttctctttcatatttacattatattcttact 23094453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 35017156 - 35017222
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattata 319  Q
    |||||| |||| |||||||||||| |||||||||||  |||||||||||| ||||| | ||||||||    
T  35017156 aaatgatatttgtacaactattttgtgacaacttttttacaactttatctctcatactaacattata 35017222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 47014942 - 47014996
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcat 307  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||| ||| ||||    
T  47014942 aaatgatatttgtacaactattttgtgacaacttttaaacaactttctctctcat 47014996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 54801001 - 54801075
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| | ||| ||| |||||||| |||| ||||||||||||| ||||||||||||| ||||    
T  54801001 aaatgatatttgtacaaccactttgtgataacttttagacaattttatctttcatactcacattatattcttact 54801075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 8455871 - 8455932
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||| |||||||||||| ||||||||||| ||||||||| ||| | ||| ||||||||||||    
T  8455871 atttgtacaactattttgtgacaacttttgaacaactttctctctaatactcacattatatt 8455932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 41609747 - 41609682
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||| | |||||||||||||||||  |||||||||||| ||||| |||||||||    
T  41609747 aaatgatatttgtacatccattttatgacaacttttgtacaactttatctctcatactcacattat 41609682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 51039184 - 51039119
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||||| ||| |||||||||||  |||||||||||| ||||| |||||||||    
T  51039184 aaatgatatttgtacaactactttgtgacaactttttgacaactttatctctcataatcacattat 51039119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 12074470 - 12074518
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaact 296  Q
    ||||||||||| ||||||||||||||||||||| || |||| |||||||    
T  12074470 ttgaaaaatgatatttatacaactattttatgataatttttgaacaact 12074518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 37775494 - 37775430
Alignment:
Q  254 aatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    ||||| |||| |||||||||||||| |||||||||  |||||||| |||||||||  ||||||||    
T  37775494 aatgatatttctacaactattttattacaacttttgtacaactttctctttcatacacacattat 37775430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 46566932 - 46567008
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctactat 329  Q
    |||||| |||| |||| | | ||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||||    
T  46566932 aaatgatatttgtacatccactttgtgacaacttttagacaactttctctctcatactcacattatattcttactat 46567008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 925135 - 925068
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||| |||||| ||||||||||| ||||| |||||||||||| |||| ||| ||| ||||| ||||||    
T  925135 ttgataaatgatatttatacaaccattttgtgacaacttttagacaattttctctctcatactcacat 925068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 52430877 - 52430916
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaactttta 289  Q
    ||||||||| |||| |||||||||||||||||||||||||    
T  52430877 gaaaaatgatatttgtacaactattttatgacaactttta 52430916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 14090123 - 14090049
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||| |||||| |||||| |||| |||||   ||||||||||||||||||| ||| ||||| |||||||| ||||    
T  14090123 ttgagaaatgatatttatccaaccatttttgtacaacttttaaacaactttctctctcatactcacattagattc 14090049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 25523271 - 25523201
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||| |||||| |||| |||||||||||| | |||||||||  |||||||| ||| ||||| |||||||||    
T  25523271 ttgagaaatgatatttgtacaactattttctcacaactttttgacaactttctctctcatactcacattat 25523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 314
Target Start/End: Original strand, 25936250 - 25936304
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaactttatctttcatattcaca 314  Q
    ||||||||||||||||| |||||||||||  |||||||| ||| ||||| |||||    
T  25936250 atttatacaactattttttgacaacttttgcacaactttctctctcatactcaca 25936304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 34114190 - 34114116
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||| |||||| |||| |||||||||||||| | |||||||  |||||||| ||| ||||| |||| ||||||||    
T  34114190 ttgataaatgatatttgtacaactattttattataactttttgacaactttttctctcatactcacgttatattc 34114116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 287
Target Start/End: Complemental strand, 45764456 - 45764422
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttt 287  Q
    |||||| ||||||||||||||||||||||||||||    
T  45764456 aaatgatatttatacaactattttatgacaacttt 45764422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 51908647 - 51908577
Alignment:
Q  249 tgaaaaatgacatttatacaactattttatgacaacttttaa-acaactttatctttcatattcacattat 318  Q
    |||||||||| |||| ||||| || ||| |||||||||| |  |||||||| |||||||||||||||||||    
T  51908647 tgaaaaatgatatttgtacaattaatttgtgacaactttaatgacaactttctctttcatattcacattat 51908577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 12241061 - 12241126
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||||||||| | |||||||||  |||||||| ||| ||||| |||||||||    
T  12241061 aaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 12241126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 12694498 - 12694433
Alignment:
Q  251 aaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacatt 316  Q
    |||||||| |||| |||||| ||||| |||||||||||  | |||||| ||| |||||||||||||    
T  12694498 aaaaatgatatttgtacaaccattttgtgacaactttttgataactttctctctcatattcacatt 12694433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 18568888 - 18568815
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||| |||||| ||||||||||| ||||| |||||||||||  |||||||| ||| | ||| |||||| |||||    
T  18568888 ttgagaaatgatatttatacaaccattttgtgacaacttttggacaactttttctcttatactcacatgatatt 18568815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 18880800 - 18880857
Alignment:
Q  265 tacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| ||||||||| |||||||| |||| ||| ||| ||||| |||||||||||||    
T  18880800 tacaacaattttatgataacttttagacaattttctctctcatactcacattatattc 18880857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 22071499 - 22071564
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| ||||| |||||  |||||||||||  |||||| | |||||||||||||||||||    
T  22071499 aaatgatatttgtacaattatttagtgacaactttttgacaactatctctttcatattcacattat 22071564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 24337399 - 24337358
Alignment:
Q  278 tgacaacttttaaacaactttatctttcatattcacattata 319  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||    
T  24337399 tgacaactttttaacaactttatctctcatactcacattata 24337358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 33820404 - 33820339
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||||||||| | |||||||||  |||||||| ||| ||||| |||||||||    
T  33820404 aaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 33820339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 46912867 - 46912798
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| | ||||| |||| |||| ||||||||| ||| ||||| |||||||||||||    
T  46912867 aaatgatatttgtacaaccactttattacaattttttaacaactttctctctcatactcacattatattc 46912798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 53781904 - 53781840
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||||||||| | |||||||||| |||| ||| ||||||||| |||||||||    
T  53781904 aaatgatatttgtacaactattttgt-acaacttttatacaattttctctttcatactcacattat 53781840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 40308441 - 40308513
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||||||| |||| |||||  ||||||| | || ||||  |||||||| ||||||||| |||||||||||||    
T  40308441 gaaaaatgatatttgtacaatcattttataataattttttgacaactttctctttcatactcacattatattc 40308513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 52456994 - 52456927
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| ||||| |||||| |||||||||||| |||| ||| ||| ||||| ||||||||||||    
T  52456994 aaatgatatttgtacaa-tattttttgacaacttttagacaattttctctctcatactcacattatatt 52456927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 37134679 - 37134605
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||| |||||| |||| ||||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||||    
T  37134679 ttgagaaatgatatttgtacaactattttatgacaattttttaacaactttctctttcatattcatattatattc 37134605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 45150334 - 45150260
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| | ||||||||||||||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  45150334 aaatgatacttatacaactattttgtgacaacttttagacaactttctctctcatactcacattatattcttact 45150260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 7867779 - 7867705
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||||||||| ||||||||||||||||| ||| | | ||||| ||||||||||||| ||||    
T  7867779 aaatgatatttgtacaactattttgtgacaacttttaaacaattttctttctcatactcacattatattcttact 7867705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 36869905 - 36869831
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  36869905 aaatgatatttgtacaaccattttttgacaacttttagacaactttctctctcatactcacattatattcttact 36869831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 36799401 - 36799470
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||||||||| ||| ||||||||||||| ||||| | ||||| |||||||||||||    
T  36799401 aaatgatatttgtacaactattttttgataacttttaaacaattttatttctcatactcacattatattc 36799470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 40785747 - 40785691
Alignment:
Q  273 ttttatgacaacttttaaacaactttatctttcatattcacattatattcctactat 329  Q
    |||| ||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||    
T  40785747 ttttttgacaacttttaaacaactttctctctcatactcacattatattcttactat 40785691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 315
Target Start/End: Complemental strand, 50280160 - 50280093
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||| |||||| |||| |||||| ||| |||||||||||||  |||||||| ||||||||||||||||    
T  50280160 ttgagaaatgatatttgtacaaccattctatgacaacttttgtacaactttctctttcatattcacat 50280093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 1295335 - 1295409
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||||||||| ||| |||||||  |||||||| ||| ||||| ||||||||||||| ||||    
T  1295335 aaatgatatttgtacaactattttgtgataacttttggacaactttttctctcatactcacattatattcttact 1295409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 1901994 - 1901920
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| | ||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  1901994 aaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacattatattcttact 1901920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 1911440 - 1911366
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| | ||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  1911440 aaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacattatattcttact 1911366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Complemental strand, 28300716 - 28300650
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattata 319  Q
    |||||| |||| |||||| | ||||||||||||||| ||||||||| ||| ||||||||| ||||||    
T  28300716 aaatgatatttgtacaaccactttatgacaactttttaacaactttctctctcatattcatattata 28300650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 462469 - 462400
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||| |||||||||||| |||||||| ||| ||||| |||| ||||||||    
T  462469 aaatgatatttgtacaaccattttgtgacaacttttagacaactttctctctcatactcacgttatattc 462400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 12094457 - 12094388
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||||||||||||||||||||||| |||| || || | | ||| ||||| |||||||||||||    
T  12094457 aaatgatatttatacaactattttatgacaattttttaaaaaatgtctctctcatactcacattatattc 12094388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 14957834 - 14957905
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattata 319  Q
    |||| |||||| |||| |||||| | ||| ||||||||||| ||||| ||| ||| ||||||||||||||||    
T  14957834 ttgagaaatgatatttgtacaaccactttgtgacaactttttaacaattttttctctcatattcacattata 14957905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 50294185 - 50294106
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||| |||||| |||| |||||| | |||  |||||||||||||||| ||||||| ||| | ||||||||||||| ||||    
T  50294185 ttgagaaatgatatttgtacaaccactttgcgacaacttttaaacaattttatctctcacactcacattatattcttact 50294106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 275229 - 275303
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||  ||||  |||||||||||||| |||||| |||| |||| ||||||||||||| ||||    
T  275229 aaatgatatttgtacaatcatttattgacaacttttaaaaaactttctcttccatactcacattatattcttact 275303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 41717266 - 41717340
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| ||||| |||||  ||||||||||||||||||||| | | ||||| |||| |||||||| ||||    
T  41717266 aaatgatatttgtacaattatttagtgacaacttttaaacaactttctatctcatactcacgttatattcttact 41717340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 45529010 - 45528936
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||||||||| |||||||||||| |||| ||| | | ||||| |||||||| |||| ||||    
T  45529010 aaatgatatttgtacaactattttttgacaacttttagacaaatttctttctcatactcacattagattcttact 45528936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 51464345 - 51464275
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||| |||||| |||| |||||| | ||| |||||||||||  |||||||||||| ||||| |||||||||    
T  51464345 ttgagaaatgatatttgtacaaccactttgtgacaactttttgacaactttatctctcatactcacattat 51464275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 7282 - 7213
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||  ||||| |||||||||||  |||||||| ||| ||||| |||||||||||||    
T  7282 aaatgatatttgtacaatcattttctgacaacttttggacaactttctctctcatactcacattatattc 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 622521 - 622460
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||| |||||| ||||||| |||||||||  |||||||| ||| ||||| ||||||||||||    
T  622521 atttgtacaaccattttattacaactttttgacaactttctctctcatactcacattatatt 622460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 32981182 - 32981121
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||| |||||| ||||  |||||||||||| |||||||| ||| ||||| ||||||||||||    
T  32981182 atttgtacaaccatttagtgacaacttttagacaactttctctctcatactcacattatatt 32981121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 35425728 - 35425671
Alignment:
Q  265 tacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| | ||||| |||||||||  |||||||||||| ||||| |||||||||||||    
T  35425728 tacaaccactttattacaactttttgacaactttatctctcatactcacattatattc 35425671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 42102260 - 42102309
Alignment:
Q  273 ttttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||| |||||||||||||||||||||||||  |||| ||| |||||||||    
T  42102260 ttttttgacaacttttaaacaactttatctcacatactcagattatattc 42102309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 43333719 - 43333670
Alignment:
Q  272 attttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||||||||||||||  |||||| | ||||||||| ||||||||||||    
T  43333719 attttatgacaactttttgacaactctctctttcatactcacattatatt 43333670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 43900825 - 43900756
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| | ||||| |||||||||  |||||||| ||| ||||| |||||||||||||    
T  43900825 aaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacattatattc 43900756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 47988553 - 47988488
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||||||||| | |||||||||  |||||||| ||| ||||| |||||||||    
T  47988553 aaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 47988488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 47997840 - 47997775
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||||||||| | |||||||||  |||||||| ||| ||||| |||||||||    
T  47997840 aaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 47997775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 48007127 - 48007062
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||||||||| | |||||||||  |||||||| ||| ||||| |||||||||    
T  48007127 aaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattat 48007062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 52678645 - 52678576
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||||||||| |||||| | ||| | | || ||||  |||||||| |||||||||||||||||||||||    
T  52678645 aaatgacatttgtacaaccaatttctaataattttttgacaactttctctttcatattcacattatattc 52678576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 27198228 - 27198160
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||  ||||| ||| ||||||||||||| ||||||| ||||| ||| ||||||||    
T  27198228 aaatgatatttgtacaatcattttttgataacttttaaacaattttatctctcatactcatattatatt 27198160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 34628138 - 34628070
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| ||||| | |||||||||| | |||||||| | ||||| ||||||||||||    
T  34628138 aaatgatatttgtacaaccattttttaacaacttttagataactttatttctcatactcacattatatt 34628070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 35987258 - 35987298
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaactttat 300  Q
    |||| |||||||||||| ||| |||||||||||||||||||    
T  35987258 atttgtacaactattttgtgataacttttaaacaactttat 35987298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 42755678 - 42755726
Alignment:
Q  273 ttttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||| ||||||||||||||||| ||| ||| ||||| ||||||||||||    
T  42755678 ttttttgacaacttttaaacaattttctctctcatactcacattatatt 42755726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 44334869 - 44334801
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| | ||||| |||||||||  |||||||| ||| ||||| ||||||||||||    
T  44334869 aaatgatatttgtacaaccactttattacaactttttgacaactttctctctcatactcacattatatt 44334801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 55196570 - 55196530
Alignment:
Q  272 attttatgacaacttttaaacaactttatctttcatattca 312  Q
    ||||||||||||||||| ||||| ||||||| |||||||||    
T  55196570 attttatgacaactttttaacaattttatctctcatattca 55196530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 20268586 - 20268512
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||||||||| |||| |||||||||||||| |||| |||| ||||||||||||||||| ||||| |||||||||    
T  20268586 ttgaaaaatgatatttgtacaactattttataacaattttttaacaactttatctttcacattcatattatattc 20268512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 30530642 - 30530574
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| ||||||||||| ||||| |||||||||||| |||||||| ||| ||||| ||||||||||||    
T  30530642 aaatgatatttatacaaccattttgtgacaacttttagacaactttctctctcatactcacattatatt 30530574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 40238441 - 40238515
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||  ||||| ||||||||||||||||| ||| ||| ||||||||||||||||||| ||||    
T  40238441 aaatgatatttgtacaatcattttttgacaacttttaaacaattttttctctcatattcacattatattcttact 40238515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 5043096 - 5043169
Alignment:
Q  254 aatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    ||||| |||| ||||| |||||| ||| || ||||||| |||||| ||||||||||||||||||||||| ||||    
T  5043096 aatgatatttgtacaattattttgtgataatttttaaataactttctctttcatattcacattatattcttact 5043169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 23554754 - 23554823
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||| ||| || |||||||||||||||||| ||||| |||||||||||||    
T  23554754 aaatgatatttgtacaaccattttttgataatttttaaacaactttatctctcatactcacattatattc 23554823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 31184284 - 31184352
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| ||||||||||||||||| ||||||||||||| ||||  ||| ||||||||    
T  31184284 aaatgatatttgtacaaccattttatgacaactttttaacaactttatctctcatgctcaaattatatt 31184352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 32821632 - 32821712
Alignment:
Q  247 cttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    ||||| |||||| |||| |||||| | ||| ||||||||||||||||| ||| ||| ||||| ||||||||||||| ||||    
T  32821632 cttgagaaatgatatttgtacaaccactttgtgacaacttttaaacaattttctctctcatactcacattatattcttact 32821712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 34395987 - 34395919
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||| ||||||||||||||||||| ||||||||| ||| ||||| |||||| |||||    
T  34395987 aaatgatatttgtacatctattttatgacaacttttgaacaactttctctctcatactcacataatatt 34395919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 47138090 - 47138030
Alignment:
Q  261 tttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||||||||||||||| | ||||||| ||||||||| | | ||||||||||||||||||    
T  47138090 tttatacaactattttattataacttttgaacaactttttatctcatattcacattatatt 47138030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 50118964 - 50118896
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| ||||||| ||| | ||||| |||||||||  |||||||||||| ||||||||||||||||||    
T  50118964 aaatgatatttatataaccactttattacaactttttgacaactttatctctcatattcacattatatt 50118896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 9882727 - 9882653
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||||||||| ||||||| |||  |||||||||||| ||||||||| ||||| ||| ||||    
T  9882727 aaatgatatttgtacaactattttgtgacaacattttgacaactttatctctcatattcatattatgttcttact 9882653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 25702283 - 25702209
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| ||||| |||||| | ||||||| || |||||||||||| ||||| ||||||||||||| ||||    
T  25702283 aaatgatatttctacaattattttttaacaacttgtagacaactttatctctcatactcacattatattcttact 25702209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 30687055 - 30687129
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||  |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  30687055 aaatgatatttgtacaaccatttagtgacaacttttagacaactttttctatcatactcacattatattcttact 30687129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 31703551 - 31703481
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    ||||||||||| ||||| |||| |||||| |||||| |||| ||||||||| ||| ||||| |||||||||    
T  31703551 ttgaaaaatgatatttagacaattattttttgacaattttttaacaactttctctctcatactcacattat 31703481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 43641051 - 43640984
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||| |||| |||||||||||||||||||| |||||  ||||||||||||    
T  43641051 aaatgatatttgtacaaccattttttgactacttttaaacaactttatctctcata--cacattatattc 43640984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 7078568 - 7078499
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||| ||||||| ||||||||||| ||||||||| ||| ||||| |||||| ||||||    
T  7078568 aaatgatatttgtacatctattttgtgacaacttttgaacaactttctctctcatactcacataatattc 7078499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 30530467 - 30530398
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| | ||||| ||||||||| ||||||||| ||| ||||| |||||||||||||    
T  30530467 aaatgatatttgtacaaccactttattacaactttttaacaactttctctctcatactcacattatattc 30530398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 44950464 - 44950420
Alignment:
Q  278 tgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||    
T  44950464 tgacaactttttaacaactttctctttcatactcacattatattc 44950420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 48576576 - 48576504
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||||||| |||| || ||| |||||||||||||||||  | |||||| ||| |||||||| ||||||||||    
T  48576576 gaaaaatgatatttgtataaccattttatgacaactttttgataactttctctctcatattcgcattatattc 48576504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 52417530 - 52417602
Alignment:
Q  249 tgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||||||| ||||  ||||||| ||||| |||||||||  |||||||| ||| ||||| ||||||||||||    
T  52417530 tgaaaaatgatatttggacaactactttattacaactttttgacaactttctctctcatactcacattatatt 52417602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 18954355 - 18954300
Alignment:
Q  266 acaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    ||||| ||||| |||||| |||| ||||||||||||| ||||||| ||||||||||    
T  18954355 acaaccattttgtgacaattttttaacaactttatctctcatatttacattatatt 18954300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 51168817 - 51168762
Alignment:
Q  272 attttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    ||||| ||| |||||||| |||||||| ||| ||||||||||||||||||| ||||    
T  51168817 attttgtgataacttttagacaactttttctctcatattcacattatattcttact 51168762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 18610776 - 18610838
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||||| |||| |||||||||||| |||||||||||  |||||||| ||| ||||| ||||||    
T  18610776 aaatgatatttgtacaactattttgtgacaacttttttacaactttctctctcatactcacat 18610838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 21255833 - 21255779
Alignment:
Q  273 ttttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  21255833 ttttttgacaacttttagacaactttttctctcatactcacattatattcttact 21255779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 318
Target Start/End: Original strand, 24158680 - 24158718
Alignment:
Q  280 acaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  24158680 acaacttttatacaactttatctttcatactcacattat 24158718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 25989052 - 25988978
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||| | |||||||||| |||| ||| ||| ||||| ||||||||||||| ||||    
T  25989052 aaatgatatttgtacaaccattttttaacaacttttagacaattttctctctcatactcacattatattcttact 25988978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 27352633 - 27352707
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||| ||| |||||||  |||||||| ||| ||||| ||||||||||||| ||||    
T  27352633 aaatgatatttgtacaaccattttgtgataacttttggacaactttctctctcatactcacattatattcttact 27352707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 33675903 - 33675969
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattata 319  Q
    ||||||||||| |||||| | ||| ||||||||||  ||||||||| ||| ||||| ||||||||||    
T  33675903 aaatgacatttgtacaaccactttttgacaactttgtaacaactttctctctcatactcacattata 33675969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 6954310 - 6954359
Alignment:
Q  278 tgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||||||||||||||  |||||| ||||||||||||||| ||| ||||    
T  6954310 tgacaacttttaaacaatattatctctcatattcacattatgttcttact 6954359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 11097952 - 11097883
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||| | ||||| ||||||||||| ||||||||| ||| ||||| |||||| ||||||    
T  11097952 aaatgatatttgtacatccattttgtgacaacttttgaacaactttctctctcatactcacataatattc 11097883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 18541119 - 18541054
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||| ||||| | |||||||||  |||||||| ||| |||||||||||||||    
T  18541119 aaatgatatttgtacaaccattttctaacaactttttgacaactttctctctcatattcacattat 18541054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 26547237 - 26547306
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| ||||  |||||| |||||| |||| ||||||||| ||| |||||||||||| ||||||    
T  26547237 aaatgatatttgtacatatattttgtgacaatttttgaacaactttctctctcatattcacataatattc 26547306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 30439253 - 30439318
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||| | |||||||||| ||||  |||||||||||| ||||| |||||||||    
T  30439253 aaatgatatttgtacaaccaatttatgacaattttttgacaactttatctctcatactcacattat 30439318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 34941969 - 34941912
Alignment:
Q  272 attttatgacaacttttaaacaactttatctttcatattcacattatattcctactat 329  Q
    ||||| |||||| ||||| |||||||| ||| ||||| ||||||||||||| ||||||    
T  34941969 attttgtgacaatttttagacaactttctctctcatactcacattatattcttactat 34941912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 36930824 - 36930748
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    ||||||||| |||| |||||  ||||| ||| |||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  36930824 gaaaaatgatatttgtacaatcattttgtga-aacttttagacaactttctctctcatactcacattatattcttact 36930748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 49596238 - 49596307
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||||| |||| ||||  |||||||| ||| ||||| |||||||||||||    
T  49596238 aaatgatatttgtacaaccattttattacaattttttgacaactttctctctcatactcacattatattc 49596307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 12999890 - 12999822
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| ||||| | |||||||||  |||||||| ||| ||||| ||||||||||||    
T  12999890 aaatgatatttgtacaaccattttctaacaacttttgtacaactttctctctcatactcacattatatt 12999822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 48872382 - 48872450
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| | |||||||||||||||| ||||| || ||| ||||| |||||| |||||    
T  48872382 aaatgatatttgtacaaccactttatgacaacttttagacaaccttctctctcatactcacatcatatt 48872450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 51037980 - 51038048
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| ||||||||||  ||||| ||||||| |||| | |||||| | |||||| |||||||||||||    
T  51037980 aaatgatatttatacaatcattttttgacaacatttagataactttctttttcatgttcacattatatt 51038048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 51172376 - 51172307
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    ||||||||| |||| |||||| | ||  ||||||||||||||||||||  ||| ||||| ||||||||||||    
T  51172376 gaaaaatgatatttgtacaaccacttcgtgacaacttttaaacaactt--tctctcatactcacattatatt 51172307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 37392046 - 37392115
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||    
T  37392046 aaatgatatttgtacaaccattttttgacaacttttaaacaactttatctctcatactcacattatattc 37392115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 327
Target Start/End: Original strand, 26123362 - 26123444
Alignment:
Q  246 tcttgaaaaatgacatttatacaactattttat-gacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    ||||||| ||||| |||| |||||||||||| | ||||||||||| |||||||| ||| ||||||||||||||||||| ||||    
T  26123362 tcttgaagaatgatatttgtacaactatttttttgacaacttttagacaactttctctctcatattcacattatattcttact 26123444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 4971293 - 4971369
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctactat 329  Q
    |||||| |||| |||||| ||||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||||    
T  4971293 aaatgatatttgtacaaccattttgtgacaacttttatacaactttctctctcatactcacattatattcttactat 4971369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 40760841 - 40760770
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    ||||||||||| ||||||||||||||||| ||| ||||||| ||||||||  ||||||||||| ||||| ||||    
T  40760841 ttgaaaaatgatatttatacaactattttgtgataacttttgaacaactt--tctttcatatttacattgtatt 40760770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 22692087 - 22692156
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||||||||||||||||||||| ||| ||| ||||| | |||||||||||    
T  22692087 aaatgatatttgtacaaccattttatgacaacttttaaacaattttctctctcatacttacattatattc 22692156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 28109955 - 28110028
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||| |||||| |||| |||||| | ||| |||||||||||||||||||||||||  |||| ||||||||||||    
T  28109955 ttgagaaatgatatttgtacaaccactttttgacaacttttaaacaactttatctcacatactcacattatatt 28110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 34304749 - 34304672
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    ||||||||| |||| |||||||||||| |||||| ||||| |||| ||| ||| ||||| ||||||||||||| ||||    
T  34304749 gaaaaatgatatttgtacaactattttttgacaatttttagacaattttctctctcatactcacattatattcttact 34304672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 45154607 - 45154539
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||||||||| |||||||||||| | |||||| ||||||||| |||||||||||||    
T  45154607 aaatgatatttgtacaactatttt-tgacaacttttagataactttctctttcatactcacattatattc 45154539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 40693596 - 40693528
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||||||||| |||||||||||| |||||||| ||| ||||| | ||||||||||    
T  40693596 aaatgatatttgtacaactattttttgacaacttttagacaactttctctctcatacttacattatatt 40693528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 44187713 - 44187768
Alignment:
Q  272 attttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    ||||| ||||||||||||||||||||||| | ||||| ||||||||||||| ||||    
T  44187713 attttttgacaacttttaaacaactttatttctcatactcacattatattcttact 44187768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 8061812 - 8061738
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||||||| || ||||| | || ||| ||||||||||||||||||||||| ||||    
T  8061812 aaatgatatttctacaaccattttatgaaaaattttagataattttctctttcatattcacattatattcttact 8061738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 42640841 - 42640911
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    ||||||||||| |||| |||||||||||| | |||||||||  |||||||| |||| |||| |||||||||    
T  42640841 ttgaaaaatgatatttgtacaactattttctaacaactttttgacaactttctcttacatactcacattat 42640911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 26153649 - 26153717
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| ||||||||||||||||||||||||  |||| ||| ||| ||||| |||||||||||||    
T  26153649 aaatgatatttgtacaactattttatgacaactttt-gacaattttctctctcatactcacattatattc 26153717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 44564790 - 44564722
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||||||||| |||||| ||||| |||||||| | ||||||| |||||||||||||    
T  44564790 aaatgatatttgtacaactatttt-tgacaatttttagacaactttttatttcatactcacattatattc 44564722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 5724042 - 5724110
Alignment:
Q  254 aatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||| |||| |||||| | ||||| ||||||||| ||||||||| ||| ||||| |||||||||||||    
T  5724042 aatgatatttgtacaaccactttattacaactttttaacaactttctctctcatactcacattatattc 5724110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 5868373 - 5868301
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| || |||| |||||||||||| | ||||||||| ||||||||| ||||| ||| |||||| ||||||    
T  5868373 gaaaaacgatatttgtacaactattttgtaacaacttttgaacaactttttcttttatactcacatgatattc 5868301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 43107637 - 43107681
Alignment:
Q  277 atgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||    
T  43107637 atgacaacttttagacaactttatctctcatactcacattatatt 43107681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 319
Target Start/End: Original strand, 5978601 - 5978648
Alignment:
Q  272 attttatgacaacttttaaacaactttatctttcatattcacattata 319  Q
    ||||||||||||||||| ||||| ||| ||||||||| ||||||||||    
T  5978601 attttatgacaactttttaacaattttctctttcatactcacattata 5978648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 18926067 - 18925991
Alignment:
Q  249 tgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||||||| |||| ||||| | ||||  |||||||||| ||||||||| ||| ||||| ||||||||||||| ||||    
T  18926067 tgaaaaatgatatttgtacaattttttt--gacaacttttgaacaactttctctctcatactcacattatattcttact 18925991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 28824506 - 28824572
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattata 319  Q
    |||||| |||| |||||| | ||| |||||||||||  |||||||| ||| ||||||||||||||||    
T  28824506 aaatgatatttgtacaaccactttctgacaactttttgacaactttctctctcatattcacattata 28824572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 30769727 - 30769664
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||||||||||  |||||||||  |||||||||||| ||||| |||||||||    
T  30769727 aaatgatatttgtacaactatttta--acaactttttgacaactttatctctcatactcacattat 30769664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 37385301 - 37385239
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||||| |||| |||||||||||| |||||||||||  |||||||| ||| ||||| ||||||    
T  37385301 aaatgatatttgtacaactattttttgacaacttttgtacaactttctctctcatactcacat 37385239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 46148188 - 46148238
Alignment:
Q  272 attttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||| |||||||||| |||||| ||||||| ||||| |||||||||||||    
T  46148188 attttttgacaactttgaaacaagtttatctctcatactcacattatattc 46148238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 47530359 - 47530305
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcat 307  Q
    |||||| ||||||||||| ||||||||||||||||| ||||| ||| ||| ||||    
T  47530359 aaatgatatttatacaaccattttatgacaacttttgaacaattttctctctcat 47530305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 16567319 - 16567388
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||||| | |||||||  |||| ||| ||||||||| |||||||||||||    
T  16567319 aaatgatatttgtacaaccattttattataactttttgacaattttctctttcatactcacattatattc 16567388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 16598343 - 16598274
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||||| | |||||||  |||| ||| ||||||||| |||||||||||||    
T  16598343 aaatgatatttgtacaaccattttattataactttttgacaattttctctttcatactcacattatattc 16598274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 17500700 - 17500769
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| | ||||| | |||||||  |||||||||||| ||||| |||||||||||||    
T  17500700 aaatgatatttgtacaaccactttattataactttttgacaactttatctctcatactcacattatattc 17500769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 17552514 - 17552445
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| | ||||| | |||||||  |||||||||||| ||||| |||||||||||||    
T  17552514 aaatgatatttgtacaaccactttattataactttttgacaactttatctctcatactcacattatattc 17552445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 19426583 - 19426648
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||| ||||| |||||||||||  |||||||| ||| ||||| |||||||||    
T  19426583 aaatgatatttgtacaaccattttgtgacaactttttgacaactttctctctcatactcacattat 19426648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 35098825 - 35098785
Alignment:
Q  278 tgacaacttttaaacaactttatctttcatattcacattat 318  Q
    ||||||||||||||||||||| ||||||||| |||| ||||    
T  35098825 tgacaacttttaaacaactttctctttcatactcacgttat 35098785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 46456695 - 46456647
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaactttatctttcata 308  Q
    ||||||||||| ||||||| ||||||||| ||||||||| ||| |||||    
T  46456695 atttatacaaccattttattacaactttttaacaactttttctctcata 46456647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 12044335 - 12044403
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||| ||| ||||| ||||||||||||    
T  12044335 aaatgatatttatacaactattttttgacaacttttagacaactttctctctcatactcacattatatt 12044403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 9189012 - 9188938
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||| | |||||||||| |||||||||||| ||||| ||||||||||||| ||||    
T  9189012 aaatgatatttgtacaaccattttttaacaacttttagacaactttatctctcatactcacattatattcttact 9188938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 32729892 - 32729966
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  32729892 aaatgatatttgtacaaccattttctgacaacttttatacaactttctctctcatactcacattatattcttact 32729966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 30744247 - 30744314
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||| |||||| ||||| ||||| ||||||||||||||| ||| ||||| ||||||||||||| ||||    
T  30744247 atttgtacaaccattttgtgacaccttttaaacaactttgtctctcatactcacattatattcttact 30744314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 14803428 - 14803376
Alignment:
Q  266 acaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    ||||||||||| ||||||||||| ||||||| | ||||||||| |||||||||    
T  14803428 acaactattttgtgacaactttttaacaactctctctttcatactcacattat 14803376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 329
Target Start/End: Original strand, 20712070 - 20712145
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctactat 329  Q
    |||||| |||| |||||||||||| | |||||||||| |||||||| ||| |||||  |||||||||||| ||||||    
T  20712070 aaatgatatttgtacaactatttt-taacaacttttagacaactttctctctcatacgcacattatattcttactat 20712145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 316
Target Start/End: Original strand, 35077126 - 35077190
Alignment:
Q  253 aaatgacatttatacaactattttatgacaactttta-aacaactttatctttcatattcacatt 316  Q
    |||||| ||||  ||||| ||||| |||||||||||| ||||||||||||||||||| |||||||    
T  35077126 aaatgatatttgaacaacaattttttgacaacttttataacaactttatctttcatactcacatt 35077190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 6435039 - 6435101
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||||| |||| |||||| | ||| |||||||||||| |||||||||||| ||||| ||||||    
T  6435039 aaatgatatttgtacaaccactttgtgacaacttttagacaactttatctctcatactcacat 6435101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 29376783 - 29376721
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacat 315  Q
    |||||| |||| |||||| ||||| ||||||||||| ||||||||| ||| ||||| ||||||    
T  29376783 aaatgatatttttacaaccattttgtgacaactttttaacaactttctctatcatagtcacat 29376721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 11785358 - 11785427
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||| |||||| ||||  |||||||| | | |||||||||||||||||||    
T  11785358 aaatgatatttgtacaaccattttgtgacaattttttgacaactttctatctcatattcacattatattc 11785427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 21506339 - 21506404
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||| ||||| |||||||||||  |||||||| ||| ||||| |||||||||    
T  21506339 aaatgatatttgtacaaccattttttgacaactttttgacaactttctctctcatactcacattat 21506404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 8173380 - 8173312
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| | |||| | ||| ||| |||||||| |||| ||| ||||||||||||||||||||||    
T  8173380 aaatgatatttgtgcaaccactttgtgataacttttagacaattttctctttcatattcacattatatt 8173312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 18792475 - 18792431
Alignment:
Q  278 tgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||||||||| ||||||||| ||| ||||| |||||||||||||    
T  18792475 tgacaactttttaacaactttctctctcatactcacattatattc 18792431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 32621804 - 32621840
Alignment:
Q  253 aaatgacatttatacaactattttatgacaactttta 289  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  32621804 aaatgatatttatacaaccattttatgacaactttta 32621840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 1052564 - 1052490
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||| | |||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  1052564 aaatgatatttgtacaaccattttttaacaacttttagacaactttatctctcatattcacattatattcttact 1052490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 9202584 - 9202519
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| |||| |||||| |||||||||||| ||||  |||||||| |||||||||||||||||||    
T  9202584 aaatgatatttctacaaccattttatgacaattttttgacaactttctctttcatattcacattat 9202519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 36816484 - 36816419
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| ||||||||||||||||||||| || ||||  |||||| | |||||||||||||||||||    
T  36816484 aaatgatatttatacaactattttatgataattttttgacaactctctctttcatattcacattat 36816419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 6742459 - 6742404
Alignment:
Q  272 attttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||| ||| ||||    
T  6742459 attttgtgacaacttttgaacaactttctctttcatattcacattatcttcttact 6742404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 14713989 - 14714055
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattata 319  Q
    |||||| |||| |||| | |||||||||||||||||||||||| || ||| ||||| ||||||||||    
T  14713989 aaatgatatttgtacatcaattttatgacaacttttaaacaacattctctctcatactcacattata 14714055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 23358647 - 23358573
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||||||| || ||||| | |||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  23358647 aaatgatatttatactacaattttttaacaacttttagacaactttctctctcatactcacattatattcttact 23358573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 30856810 - 30856884
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| | ||| |||||||||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  30856810 aaatgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatactcacattatattcttact 30856884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 36763591 - 36763518
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| ||||||| |||| ||| |||||||| |||||||| ||||||||| ||||||||||||| ||||    
T  36763591 aaatgatatttgtacaactttttt-tgataacttttatacaactttctctttcatactcacattatattcttact 36763518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 43622015 - 43621961
Alignment:
Q  254 aatgacatttatacaactattttatgacaacttttaaacaactttatctttcata 308  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||| ||| |||||    
T  43622015 aatgatatttgtacaactattttatgacaacttttgaacaactttctctctcata 43621961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 298
Target Start/End: Complemental strand, 3299173 - 3299128
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaacttt 298  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||    
T  3299173 aaatgatatttgtacaaccattttatgacaacttttaaacaacttt 3299128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 546453 - 546385
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| | ||||| ||||||||| ||||||||| ||| ||||| ||||||||||||    
T  546453 aaatgatatttgtacaaccactttattacaactttttaacaactttctctctcatactcacattatatt 546385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 7498059 - 7497991
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| ||||||| |||||||||  |||||||| ||| ||||| ||||||||||||    
T  7498059 aaatgatatttgtacaaccattttattacaactttttgacaactttctctctcatactcacattatatt 7497991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 35965575 - 35965647
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||||||| |||| |||||| | ||||| |||| ||||  |||||||| ||||||||| |||||||||||||    
T  35965575 gaaaaatgatatttgtacaaccactttattacaattttttgacaactttctctttcatactcacattatattc 35965647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 8352838 - 8352912
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||||||||| | | |||||||| |||| ||| ||| ||||| ||||||||||||| ||||    
T  8352838 aaatgatatttgtacaactattttttaataacttttagacaattttctctctcatactcacattatattcttact 8352912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 14954648 - 14954598
Alignment:
Q  272 attttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||| ||||||    
T  14954648 attttgtgacaacttttgaacaactttctctctcatattcacataatattc 14954598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 15283318 - 15283244
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| | ||| |||||| ||||| |||||||| ||| ||||| ||||||||||||| ||||    
T  15283318 aaatgatatttgtacaaccactttgtgacaatttttagacaactttctctctcatactcacattatattcttact 15283244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 322
Target Start/End: Original strand, 28165127 - 28165201
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||| |||||| | || |||||| ||||| |||||||||||| |||| ||| ||| ||||| |||||||||||||    
T  28165127 ttgagaaatgatacttgtacaaccattttgtgacaacttttagacaattttctctctcatactcacattatattc 28165201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 39147780 - 39147834
Alignment:
Q  265 tacaactattttatgacaactttta-aacaactttatctttcatattcacattat 318  Q
    |||||||||||| | |||||||||  ||||||||| |||||||||||||||||||    
T  39147780 tacaactatttttttacaacttttgtaacaactttctctttcatattcacattat 39147834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 2308390 - 2308321
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| | ||| ||||||| |||  |||||||||||| ||||| |||||||||||||    
T  2308390 aaatgatatttgtacaaccaatttttgacaaccttttgacaactttatctctcatactcacattatattc 2308321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 3959897 - 3959966
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| ||||||  |||| |||||||||||| |||| ||| ||| ||||| |||||||||||||    
T  3959897 aaatgatatttgtacaacctttttttgacaacttttacacaattttctctctcatactcacattatattc 3959966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 6746220 - 6746285
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattat 318  Q
    |||||| ||||||||||||| ||| | ||||||||| ||||| ||| ||| ||||||||| |||||    
T  6746220 aaatgatatttatacaactaatttttaacaactttttaacaattttctctctcatattcatattat 6746285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 22303199 - 22303248
Alignment:
Q  246 tcttgaaaaatgacatttatacaactattttatgacaacttttaaacaac 295  Q
    |||||| |||||| |||| |||||||||||| ||||||||||| ||||||    
T  22303199 tcttgagaaatgatatttgtacaactattttttgacaacttttgaacaac 22303248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 42554779 - 42554848
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| | ||||| |||||||||  |||||||| ||| ||||| |||||||||||||    
T  42554779 aaatgatatttgtacaaccactttattacaacttttttacaactttctctctcatactcacattatattc 42554848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 4842563 - 4842519
Alignment:
Q  278 tgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||||||||| |||||||| ||| ||||| |||||||||||||    
T  4842563 tgacaacttttagacaactttctctctcatactcacattatattc 4842519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 6666023 - 6666091
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| |||| |||||| ||||||| |||||||||  || ||||| ||| ||||| ||||||||||||    
T  6666023 aaatgatatttgtacaaccattttattacaacttttttacgactttctctctcatactcacattatatt 6666091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 9449454 - 9449414
Alignment:
Q  282 aacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||||| ||||||||| ||| |||||||||||||||||||    
T  9449454 aactttttaacaactttctctctcatattcacattatattc 9449414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 20508420 - 20508384
Alignment:
Q  260 atttatacaactattttatgacaacttttaaacaact 296  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  20508420 atttatacaactattttataacaacttttatacaact 20508384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 27939157 - 27939229
Alignment:
Q  250 gaaaaatgacatttatacaactattttatgacaactttta-aacaactttatctttcatattcacattatatt 321  Q
    ||||||||| ||||||||||||||||| |||||| |||||  | ||| |||||| ||||| ||| ||||||||    
T  27939157 gaaaaatgatatttatacaactattttgtgacaatttttatgataacattatctctcatactcatattatatt 27939229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 37966588 - 37966655
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatatt 321  Q
    |||||| ||||||||||| ||||||  |||||||||  |||| ||| ||||||||| ||||||||||||    
T  37966588 aaatgatatttatacaaccattttaaaacaactttt-gacaattttctctttcatactcacattatatt 37966655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 60472 - 60541
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||||| |||||||||  |||||||| |||||||||||||||||||||||    
T  60472 aaatgatatttgtacaaccattttattacaactttttgacaactttttctttcatattcacattatattc 60541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 440721 - 440795
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||||| |||||||||||||||| |||||||| ||| ||||| ||||||| ||||| ||||    
T  440721 aaatgatatttgtacaactactttatgacaacttttagacaactttctctctcatactcacattctattcttact 440795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 1081 - 1135
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcat 307  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||| ||| ||||    
T  1081 aaatgatatttgtacaactattttgtgacaacttttaaacaactttctctctcat 1135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 337121 - 337195
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattcctact 327  Q
    |||||| |||| |||||| ||||| ||||||||||| || |||||| ||| ||||| ||||||||||||| ||||    
T  337121 aaatgatatttgtacaaccattttctgacaacttttgaataactttctctctcatactcacattatattcttact 337195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 8045 - 8001
Alignment:
Q  251 aaaaatgacatttatacaactattttatgacaacttttaaacaac 295  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||||    
T  8045 aaaaatgatatttatacaaccattttatgacaacttttgaacaac 8001  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 34411 - 34477
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattata 319  Q
    |||||| |||| |||||||||||| ||||||||||   |||||||| ||| ||||| ||||||||||    
T  34411 aaatgatatttgtacaactattttttgacaactttgtgacaactttctctctcatactcacattata 34477  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 322
Target Start/End: Original strand, 155904 - 155978
Alignment:
Q  248 ttgaaaaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||| |||||| |||| |||||| ||||||| |||||||||  |||||||| ||| || || |||||||||||||    
T  155904 ttgagaaatgatatttgtacaaccattttattacaactttttgacaactttctctctcgtactcacattatattc 155978  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 4318 - 4387
Alignment:
Q  253 aaatgacatttatacaactattttatgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    |||||| |||| |||||| ||||||||| |||||||  |||||||| | | ||||| |||||||||||||    
T  4318 aaatgatatttgtacaaccattttatgataactttttgacaactttctatctcatactcacattatattc 4387  T

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Target: scaffold0511 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 11666 - 11710
Alignment:
Q  278 tgacaacttttaaacaactttatctttcatattcacattatattc 322  Q
    ||||||||||| ||||||||| ||| ||||| |||||||||||||    
T  11666 tgacaactttttaacaactttctctctcatactcacattatattc 11710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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