View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9910_high_33 (Length: 247)
Name: NF9910_high_33
Description: NF9910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9910_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 34506819 - 34506580
Alignment:
| Q |
1 |
tgttttcggctgctaggatgcgattgtcaatgaatgctaggattgttagccattggtattgaatggcataaattaaaggtgtgacaaatttggccaattt |
100 |
Q |
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| T |
34506819 |
tgttttcggctgctaggatgcgatcgtcaatgaatgctaggattgttagccattggtattgaatggcataaattaaaggtgtgacaaatttggccaattt |
34506720 |
T |
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| Q |
101 |
tgacatgtttcttaatgttgaacctaatggtccattgatattttgggtttttcctatggcaatgtcaccaattgctatgattgaaactccacatgcatgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34506719 |
tgacatgtttcttaatgttgaacctaatggtccattgatattttgggtttttcctatggcaatgtcaccaattgctatgattgaaactccacatgcatgt |
34506620 |
T |
|
| Q |
201 |
aagggacgttgccttgaactcattcttcttgttgcctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
34506619 |
aagggacgttgccttgaactcattcttcttgttgcctttg |
34506580 |
T |
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