View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9910_low_38 (Length: 256)
Name: NF9910_low_38
Description: NF9910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9910_low_38 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 35212811 - 35213042
Alignment:
| Q |
16 |
cagttcttgggtcataagcaggaaaagtttttcctattcaccaataataaattgtcacaactacactccactatgtataacattagaggtattagtatac |
115 |
Q |
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| T |
35212811 |
cagttcttgggtcataagcaggaaaagtttttcctattcaccaataataaattgtcacaactacactccactatgcataacattagaggtattagtatac |
35212910 |
T |
|
| Q |
116 |
tattaaatcacatgaacctgatgcagcatccacaaatttcccattaatgagattctttgtgtatcttatttccacagatggtgtgattaattcatcaact |
215 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35212911 |
tattaaatcacatgaacctgatgcagcatccataaatttcccattaatgagattctttgtgtatcttatttccacagatggtgtgattaattcatcaact |
35213010 |
T |
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| Q |
216 |
tcagcagcagtgctcaacttgcctatgcttct |
247 |
Q |
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|||||||||||||||||||||| |||| |||| |
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| T |
35213011 |
tcagcagcagtgctcaacttgcttatgtttct |
35213042 |
T |
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