View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9911_low_8 (Length: 302)
Name: NF9911_low_8
Description: NF9911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9911_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 18 - 284
Target Start/End: Complemental strand, 44542094 - 44541828
Alignment:
| Q |
18 |
tcacatacactgacgaagatacctcaaaagcaactgagactacctcccttgatcacaaggaagggctgatagaacaagaattcaagaaatattactgtga |
117 |
Q |
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| T |
44542094 |
tcacatacaccgacgaagatacctcaaaagcaactgagactacctcccttgatgacaaggaagggctgatagaacaagaattcaagaaatattactgtga |
44541995 |
T |
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| Q |
118 |
aagcaatgtttgcagtgacttatatgcaaacgatggttcacgctatgttggaaatgaagatgcagtacaaaaagaagcaattttgaacgaaacagtgaat |
217 |
Q |
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| T |
44541994 |
aagcaatgtttgcagtgacttatatgcaaacgatggttcacgctatgttggaaatgaagatgcagtacaaaaagaagcaattttgaacgaaacagcgaat |
44541895 |
T |
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| Q |
218 |
ttcactatgctgcaaaaggaacaaccatcaatattgacatcatgggttatgcccatgctgatgttag |
284 |
Q |
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| T |
44541894 |
ttcactatgctgcaaaaggaacaaccatcaatattgacatcctgggttatgcccatgctgatgttag |
44541828 |
T |
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