View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9912_high_12 (Length: 271)

Name: NF9912_high_12
Description: NF9912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9912_high_12
NF9912_high_12
[»] scaffold0693 (1 HSPs)
scaffold0693 (71-251)||(992-1177)
[»] chr4 (40 HSPs)
chr4 (71-251)||(53482218-53482403)
chr4 (23-68)||(34106597-34106642)
chr4 (18-71)||(53815688-53815741)
chr4 (18-70)||(8690207-8690259)
chr4 (18-70)||(28520781-28520833)
chr4 (23-71)||(30152120-30152168)
chr4 (24-70)||(40150466-40150512)
chr4 (18-71)||(9692954-9693007)
chr4 (18-71)||(14149785-14149838)
chr4 (18-71)||(48512191-48512244)
chr4 (18-70)||(36008268-36008320)
chr4 (18-70)||(42411504-42411556)
chr4 (18-70)||(48968260-48968312)
chr4 (18-70)||(56531286-56531338)
chr4 (18-73)||(41492548-41492602)
chr4 (18-72)||(37032229-37032283)
chr4 (18-67)||(20753175-20753223)
chr4 (18-67)||(52031203-52031252)
chr4 (18-67)||(55266485-55266533)
chr4 (18-70)||(2565254-2565306)
chr4 (18-70)||(12820455-12820507)
chr4 (23-71)||(46799400-46799448)
chr4 (23-70)||(15640498-15640545)
chr4 (32-71)||(16996455-16996494)
chr4 (18-57)||(27296828-27296867)
chr4 (18-67)||(29269365-29269412)
chr4 (18-67)||(36954132-36954182)
chr4 (18-63)||(9084759-9084804)
chr4 (18-67)||(17268613-17268661)
chr4 (18-71)||(30615990-30616043)
chr4 (18-67)||(47017996-47018044)
chr4 (18-71)||(49039495-49039547)
chr4 (18-67)||(50657877-50657925)
chr4 (18-71)||(54854229-54854281)
chr4 (18-66)||(20181209-20181256)
chr4 (135-183)||(25138974-25139022)
chr4 (44-72)||(29785142-29785170)
chr4 (18-66)||(32885686-32885733)
chr4 (144-184)||(39827194-39827234)
chr4 (18-70)||(49319387-49319438)
[»] chr1 (31 HSPs)
chr1 (18-71)||(38021244-38021297)
chr1 (19-71)||(25819177-25819229)
chr1 (18-71)||(29491462-29491515)
chr1 (18-71)||(39238708-39238761)
chr1 (18-71)||(40678815-40678868)
chr1 (18-73)||(17350051-17350106)
chr1 (18-72)||(35111641-35111695)
chr1 (18-67)||(47763435-47763484)
chr1 (18-70)||(2052732-2052784)
chr1 (18-70)||(9527419-9527471)
chr1 (19-71)||(29442018-29442069)
chr1 (32-74)||(5907789-5907831)
chr1 (18-64)||(13870131-13870177)
chr1 (23-69)||(25162716-25162762)
chr1 (18-70)||(52961132-52961183)
chr1 (17-67)||(18923934-18923983)
chr1 (18-67)||(538379-538427)
chr1 (18-67)||(3533023-3533071)
chr1 (18-71)||(9768859-9768911)
chr1 (18-63)||(9769630-9769674)
chr1 (18-67)||(15774362-15774410)
chr1 (18-71)||(18003809-18003861)
chr1 (18-71)||(19976602-19976655)
chr1 (18-67)||(38019998-38020046)
chr1 (18-67)||(40814816-40814864)
chr1 (17-62)||(47939247-47939292)
chr1 (18-67)||(48110526-48110574)
chr1 (18-67)||(52833156-52833205)
chr1 (18-66)||(749636-749683)
chr1 (18-66)||(4429532-4429579)
chr1 (18-66)||(24168629-24168676)
[»] chr6 (23 HSPs)
chr6 (18-70)||(6143958-6144010)
chr6 (18-71)||(9064858-9064911)
chr6 (18-70)||(14981752-14981804)
chr6 (18-71)||(2945588-2945641)
chr6 (22-70)||(33628992-33629040)
chr6 (18-72)||(29284109-29284163)
chr6 (18-67)||(18991481-18991529)
chr6 (25-71)||(3448344-3448390)
chr6 (24-70)||(4078655-4078701)
chr6 (24-70)||(24470447-24470493)
chr6 (18-67)||(9491785-9491833)
chr6 (18-67)||(12089094-12089142)
chr6 (18-67)||(22389800-22389848)
chr6 (18-63)||(31741513-31741557)
chr6 (18-71)||(34524868-34524920)
chr6 (18-63)||(35190764-35190808)
chr6 (24-72)||(6219346-6219393)
chr6 (143-183)||(10346041-10346081)
chr6 (18-70)||(10455736-10455787)
chr6 (136-172)||(17115162-17115198)
chr6 (23-67)||(19642602-19642645)
chr6 (18-70)||(26669709-26669760)
chr6 (19-67)||(31411112-31411159)
[»] chr3 (33 HSPs)
chr3 (18-72)||(10959124-10959178)
chr3 (18-71)||(9624975-9625028)
chr3 (18-71)||(27183731-27183784)
chr3 (18-70)||(14868678-14868730)
chr3 (18-70)||(47191366-47191418)
chr3 (18-71)||(41767818-41767871)
chr3 (18-70)||(28226237-28226289)
chr3 (23-70)||(39298022-39298069)
chr3 (18-64)||(34136763-34136808)
chr3 (24-73)||(42824041-42824090)
chr3 (18-71)||(43774177-43774230)
chr3 (21-66)||(48173284-48173328)
chr3 (18-67)||(49639025-49639073)
chr3 (24-64)||(3784069-3784109)
chr3 (135-183)||(11465672-11465720)
chr3 (18-70)||(19137613-19137664)
chr3 (18-66)||(36331776-36331824)
chr3 (18-70)||(36476352-36476404)
chr3 (18-70)||(38555077-38555129)
chr3 (18-70)||(52030114-52030166)
chr3 (18-69)||(7448413-7448464)
chr3 (18-69)||(7456555-7456606)
chr3 (18-73)||(16874240-16874294)
chr3 (18-73)||(24559379-24559434)
chr3 (18-65)||(31576509-31576556)
chr3 (21-67)||(44976570-44976616)
chr3 (18-67)||(3955302-3955351)
chr3 (18-67)||(13540014-13540062)
chr3 (18-67)||(33206754-33206802)
chr3 (25-66)||(40557620-40557661)
chr3 (26-67)||(46416281-46416321)
chr3 (18-70)||(12236593-12236644)
chr3 (32-72)||(53705656-53705696)
[»] chr5 (28 HSPs)
chr5 (18-67)||(36045184-36045233)
chr5 (18-70)||(20735225-20735277)
chr5 (18-72)||(37303925-37303979)
chr5 (18-70)||(1463864-1463916)
chr5 (19-70)||(3102178-3102229)
chr5 (23-70)||(5156890-5156937)
chr5 (18-67)||(6447530-6447579)
chr5 (18-71)||(6806690-6806743)
chr5 (18-70)||(4674865-4674917)
chr5 (18-70)||(7147069-7147120)
chr5 (18-70)||(9963409-9963461)
chr5 (24-67)||(42618469-42618512)
chr5 (42-72)||(16844107-16844137)
chr5 (25-71)||(30119951-30119996)
chr5 (29-75)||(31591907-31591953)
chr5 (141-183)||(39046952-39046994)
chr5 (18-67)||(843418-843466)
chr5 (18-67)||(9176836-9176884)
chr5 (32-69)||(17242709-17242746)
chr5 (18-67)||(18872518-18872566)
chr5 (18-67)||(37417179-37417228)
chr5 (23-71)||(4009859-4009907)
chr5 (23-67)||(4666501-4666544)
chr5 (18-70)||(4793962-4794014)
chr5 (135-183)||(4878595-4878643)
chr5 (18-70)||(10106624-10106675)
chr5 (23-71)||(40250232-40250279)
chr5 (135-183)||(42265447-42265495)
[»] scaffold0809 (1 HSPs)
scaffold0809 (18-70)||(4855-4907)
[»] scaffold0036 (1 HSPs)
scaffold0036 (18-70)||(25019-25071)
[»] scaffold0002 (2 HSPs)
scaffold0002 (18-70)||(451425-451477)
scaffold0002 (18-58)||(440405-440444)
[»] chr8 (25 HSPs)
chr8 (18-70)||(2800012-2800064)
chr8 (18-70)||(10292345-10292397)
chr8 (23-70)||(21133574-21133621)
chr8 (18-72)||(2696524-2696578)
chr8 (18-71)||(38790623-38790676)
chr8 (23-71)||(31129297-31129345)
chr8 (18-73)||(1588757-1588812)
chr8 (18-71)||(14012604-14012657)
chr8 (19-67)||(29108659-29108706)
chr8 (32-72)||(32878653-32878693)
chr8 (24-71)||(36815519-36815566)
chr8 (21-67)||(41225718-41225763)
chr8 (18-67)||(7649526-7649574)
chr8 (18-67)||(9524954-9525002)
chr8 (22-67)||(14010826-14010870)
chr8 (18-67)||(15042415-15042463)
chr8 (18-67)||(23857374-23857422)
chr8 (18-67)||(24608533-24608581)
chr8 (18-67)||(28465615-28465663)
chr8 (18-67)||(39484420-39484468)
chr8 (18-67)||(43468755-43468803)
chr8 (18-66)||(22426398-22426446)
chr8 (18-58)||(35301213-35301253)
chr8 (26-70)||(37128730-37128774)
chr8 (32-72)||(44019541-44019581)
[»] chr7 (28 HSPs)
chr7 (18-70)||(41139080-41139132)
chr7 (18-73)||(16814688-16814742)
chr7 (18-71)||(14818415-14818468)
chr7 (18-71)||(15265413-15265466)
chr7 (18-71)||(41417325-41417378)
chr7 (18-70)||(21285403-21285455)
chr7 (18-67)||(31475890-31475939)
chr7 (23-60)||(34960975-34961012)
chr7 (18-67)||(45417470-45417518)
chr7 (18-70)||(15912768-15912820)
chr7 (19-67)||(46914960-46915008)
chr7 (23-70)||(4169069-4169116)
chr7 (24-71)||(19126729-19126776)
chr7 (18-73)||(29658322-29658377)
chr7 (24-71)||(48174960-48175006)
chr7 (23-73)||(7392361-7392410)
chr7 (18-72)||(24304333-24304387)
chr7 (21-67)||(30566499-30566545)
chr7 (21-67)||(35919724-35919769)
chr7 (18-63)||(23470550-23470594)
chr7 (23-64)||(27674861-27674902)
chr7 (18-67)||(29710150-29710198)
chr7 (18-71)||(35195836-35195888)
chr7 (18-67)||(49012395-49012443)
chr7 (18-70)||(20527479-20527531)
chr7 (18-70)||(37917386-37917437)
chr7 (18-70)||(38451856-38451908)
chr7 (23-67)||(43970908-43970951)
[»] chr2 (29 HSPs)
chr2 (18-72)||(29034967-29035021)
chr2 (18-67)||(2114485-2114533)
chr2 (18-71)||(21970489-21970542)
chr2 (18-70)||(2304283-2304335)
chr2 (23-67)||(2935813-2935857)
chr2 (23-71)||(34034343-34034391)
chr2 (23-70)||(43870946-43870993)
chr2 (18-71)||(11133068-11133121)
chr2 (18-67)||(20122525-20122573)
chr2 (18-70)||(29664596-29664648)
chr2 (23-70)||(35456841-35456888)
chr2 (25-67)||(32988347-32988388)
chr2 (33-67)||(33045040-33045074)
chr2 (18-67)||(580833-580881)
chr2 (18-67)||(3179321-3179369)
chr2 (42-71)||(5772853-5772882)
chr2 (18-67)||(8234842-8234890)
chr2 (18-63)||(17239902-17239946)
chr2 (18-67)||(18364425-18364473)
chr2 (20-61)||(19072446-19072487)
chr2 (42-71)||(22355076-22355105)
chr2 (18-67)||(30474245-30474293)
chr2 (18-59)||(32527127-32527168)
chr2 (18-67)||(36520830-36520878)
chr2 (18-63)||(40044129-40044174)
chr2 (23-71)||(7052766-7052814)
chr2 (19-67)||(15392262-15392309)
chr2 (18-70)||(36277752-36277803)
chr2 (18-66)||(44187701-44187749)
[»] scaffold0070 (1 HSPs)
scaffold0070 (18-70)||(12558-12610)
[»] scaffold2098 (1 HSPs)
scaffold2098 (18-70)||(663-715)
[»] scaffold0308 (1 HSPs)
scaffold0308 (18-70)||(7069-7121)
[»] scaffold0227 (1 HSPs)
scaffold0227 (18-70)||(21843-21895)
[»] scaffold0016 (1 HSPs)
scaffold0016 (32-71)||(204583-204622)
[»] scaffold0712 (1 HSPs)
scaffold0712 (18-75)||(4509-4565)
[»] scaffold0709 (1 HSPs)
scaffold0709 (18-75)||(4529-4585)
[»] scaffold0168 (1 HSPs)
scaffold0168 (18-71)||(34083-34135)
[»] scaffold0072 (1 HSPs)
scaffold0072 (32-73)||(25686-25727)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-59)||(108411-108452)
[»] scaffold0119 (1 HSPs)
scaffold0119 (18-70)||(1033-1084)
[»] scaffold0112 (1 HSPs)
scaffold0112 (18-70)||(17981-18033)
[»] scaffold0019 (1 HSPs)
scaffold0019 (135-183)||(67463-67511)


Alignment Details
Target: scaffold0693 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 71 - 251
Target Start/End: Original strand, 992 - 1177
Alignment:
Q  71 attatcaaatctgttttatactataaaaaataggatcttggttatgtgtcttaaaagacatatgttaatgaaaaaattatactttaaaaatgttaaaaa- 169  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  992 attatcaaatctgttttatactatataaaataggatcttggttatgtgtcttaaaagacatatgttaatgaaaaaattatactttaaaaatgttaaaaat 1091  T
Q  170 cttcaattttca----attgactaggtgaaaattagaaagagaaatgttaaatagttaaggaatcaaatgcagtaagtattgcatt 251  Q
     |||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  1092 tttcaattttcaatatattgactaggtgaaaattagaaagagaaatgttaaatagttaaggaatcaaatttagtaagtattgcatt 1177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 71 - 251
Target Start/End: Original strand, 53482218 - 53482403
Alignment:
Q  71 attatcaaatctgttttatactataaaaaataggatcttggttatgtgtcttaaaagacatatgttaatgaaaaaattatactttaaaaatgttaaaaa- 169  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  53482218 attatcaaatctgttttatactatataaaataggatcttggttatgtgtcttaaaagacatatgttaatgaaaaaattatactttaaaaatgttaaaaat 53482317  T
Q  170 cttcaattttca----attgactaggtgaaaattagaaagagaaatgttaaatagttaaggaatcaaatgcagtaagtattgcatt 251  Q
     |||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  53482318 tttcaattttcaatatattgactaggtgaaaattagaaagagaaatgttaaatagttaaggaatcaaatttagtaagtattgcatt 53482403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 34106642 - 34106597
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacgggg 68  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  34106642 catataataatgcattgttcctgccaactgagctatgctcacgggg 34106597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 53815741 - 53815688
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  53815741 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 53815688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 8690259 - 8690207
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  8690259 ccctgcatataataatgcattgtccttgccaactgagctatgctcacgaggac 8690207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 28520781 - 28520833
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  28520781 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 28520833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 30152168 - 30152120
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  30152168 catataacaatgcattgttcctgccaactgagctatgctcacggggaca 30152120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 40150512 - 40150466
Alignment:
Q  24 atataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  40150512 atataataatgcattgttcctgccaactgaactatgctcacggggac 40150466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 9693007 - 9692954
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||| | | ||||||||||||||||||||||||||||    
T  9693007 ccctgcatataataatgcattatccctgccaactgagctatgctcacggggaca 9692954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 14149838 - 14149785
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| | |||||||||||||||| |||||||||||    
T  14149838 ccctgcatataataatgcattgtccctgccaactgagctatggtcacggggaca 14149785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 48512244 - 48512191
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  48512244 ccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggaca 48512191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 36008320 - 36008268
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||| | |||||||||||||||||||||||||||    
T  36008320 ccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 36008268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 42411504 - 42411556
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||| ||||||||| | |||||||||||||||||||||||||||    
T  42411504 ccctgcatataattatgcattgtccctgccaactgagctatgctcacggggac 42411556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 48968260 - 48968312
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||||||| ||||||||||||||||    
T  48968260 ccctgcatataataatgcattgtccctgccaactgaactatgctcacggggac 48968312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 56531286 - 56531338
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  56531286 ccctgcatataacaatgcattgtccttgccaactgagctatgctcacagggac 56531338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 41492548 - 41492602
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacatt 73  Q
    |||| ||||||||||||||| || | ||||||||||||||||||||||||||||||    
T  41492548 ccctgcatataataatgcat-gtccctgccaactgagctatgctcacggggacatt 41492602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 37032229 - 37032283
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    |||| |||||||||||||||||| ||||||||||  ||||||||||| |||||||    
T  37032229 ccctgcatataataatgcattgtccttgccaactatgctatgctcacagggacat 37032283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 20753175 - 20753223
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  20753175 ccctacatataataatgcatt-ttcctaccaactgagctatgctcacggg 20753223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 52031252 - 52031203
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||| ||||||||||||| |||||||||||||| |||||||||    
T  52031252 ccctgcatatactaatgcattgttcctgccaactgagctaagctcacggg 52031203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 55266485 - 55266533
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  55266485 ccctgcatataataatgcattgttc-taccaactgagctatgctcacggg 55266533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 2565306 - 2565254
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||| | || ||||||||||||||||||||||||    
T  2565306 ccctgcatataacaatgcattgtccctgtcaactgagctatgctcacggggac 2565254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 12820455 - 12820507
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| ||||||||||   |||||||||||||||||||||||||||    
T  12820455 ccctgcatataacaatgcattgtctctgccaactgagctatgctcacggggac 12820507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 46799448 - 46799400
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||||||||||||||||| | |||||||| | |||||||||||||||||    
T  46799448 catataataatgcattgtgcctgccaactaaactatgctcacggggaca 46799400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 15640498 - 15640545
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||||||||||||||   ||||||||||| |||||||||||||||    
T  15640498 catataataatgcattgtctctgccaactgagatatgctcacggggac 15640545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 16996494 - 16996455
Alignment:
Q  32 atgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  16996494 atgcattgttcttaccaactgagctaagctcacggggaca 16996455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 27296867 - 27296828
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagcta 57  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  27296867 ccctatatataataatgcattgttcctgccaactgagcta 27296828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 29269365 - 29269412
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    ||||||||||||||||||||||| |   ||||||||||||||||||||||    
T  29269365 ccctacatataataatgcattgtcc--accaactgagctatgctcacggg 29269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 36954182 - 36954132
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaac-tgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| | ||||||| |||||||||||||||||    
T  36954182 ccctgcatataataatgcattgtccctgccaacttgagctatgctcacggg 36954132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 9084804 - 9084759
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctca 63  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||||    
T  9084804 ccctgcatataacaatgcattgtccctgccaactgagctatgctca 9084759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 17268613 - 17268661
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||| ||| |||| |||||||||| |||||||||||||    
T  17268613 ccctacatataataatacat-gttcctgccaactgaactatgctcacggg 17268661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 30616043 - 30615990
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| |||||||||| | || ||| |||||||||||||||||||||    
T  30616043 ccctgcatataacaatgcattgtccatgtcaattgagctatgctcacggggaca 30615990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 47017996 - 47018044
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  47017996 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 47018044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 49039495 - 49039547
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| ||||||| || | ||||||||||||||||||||||||||||    
T  49039495 ccctgcatataacaatgcat-gtccctgccaactgagctatgctcacggggaca 49039547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 50657925 - 50657877
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  50657925 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 50657877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 54854229 - 54854281
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||| |||||| || | ||||||||||||||||||||||||||||    
T  54854229 ccctgcatataattatgcat-gtccctgccaactgagctatgctcacggggaca 54854281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 20181256 - 20181209
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacgg 66  Q
    |||||||||||||| |||||||| ||  |||||||||||||||||||||    
T  20181256 ccctacatataatactgcattgtccta-ccaactgagctatgctcacgg 20181209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 25139022 - 25138974
Alignment:
Q  135 ttaatgaaaaaattatactttaaaaatgttaaaaacttcaattttcaat 183  Q
    |||| ||| ||||||||||||||||| ||||||||||| ||||| ||||    
T  25139022 ttaaagaagaaattatactttaaaaaggttaaaaactttaatttacaat 25138974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 29785170 - 29785142
Alignment:
Q  44 tgccaactgagctatgctcacggggacat 72  Q
    |||||||||||||||||||||||||||||    
T  29785170 tgccaactgagctatgctcacggggacat 29785142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 32885733 - 32885686
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacgg 66  Q
    |||| |||||||||||||||||| ||  |||||||||||||||||||||    
T  32885733 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacgg 32885686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 39827234 - 39827194
Alignment:
Q  144 aaattatactttaaaaatgttaaaaacttcaattttcaatt 184  Q
    ||||||| |||||||||||| ||||| ||||||||||||||    
T  39827234 aaattattctttaaaaatgtcaaaaatttcaattttcaatt 39827194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 49319438 - 49319387
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||||||||||| || | |||||||||||||||||||||| ||||    
T  49319438 ccctgcatataataatgcat-gtccatgccaactgagctatgctcacgaggac 49319387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 38021297 - 38021244
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38021297 ccctgcatataataatgcattgtccttgccaactgagctatgctcacggggaca 38021244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 25819229 - 25819177
Alignment:
Q  19 cctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  25819229 cctacatataataatgcattgtccctgccaactgagctatgctcacggggaca 25819177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 29491515 - 29491462
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  29491515 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 29491462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 39238761 - 39238708
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  39238761 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 39238708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 40678868 - 40678815
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  40678868 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 40678815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 17350106 - 17350051
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacatt 73  Q
    |||| |||||||||||||||||| | ||||||||||||||| ||||||||||||||    
T  17350106 ccctgcatataataatgcattgtccctgccaactgagctatactcacggggacatt 17350051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 35111695 - 35111641
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    |||| |||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  35111695 ccctgcatataataatgcattgttcctatcaactgagctatgctcacggggacat 35111641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 47763435 - 47763484
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  47763435 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggg 47763484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 2052732 - 2052784
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||| |||||||||||| | |||||||||||||||||||||||||||    
T  2052732 ccctgcatatgataatgcattgtccctgccaactgagctatgctcacggggac 2052784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 9527471 - 9527419
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||| | |||||||||||||||||||||||||||    
T  9527471 ccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 9527419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 29442018 - 29442069
Alignment:
Q  19 cctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  29442018 cctacatataataatgcattgtccta-ccaactgagctatgctcacggggaca 29442069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 5907831 - 5907789
Alignment:
Q  32 atgcattgttcttgccaactgagctatgctcacggggacatta 74  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  5907831 atgcattgtccttgccaactgagctaagctcacggggacatta 5907789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 13870131 - 13870177
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcac 64  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||    
T  13870131 ccctgcatataataatgcattgtccctgccaactgagctatgctcac 13870177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 25162716 - 25162762
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacgggga 69  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  25162716 catataataatgcattgtccctgctaactgagctatgctcacgggga 25162762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 52961132 - 52961183
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| ||||||| || |||||||||||||||||||||||||||||    
T  52961132 ccctgcatataacaatgcat-gtccttgccaactgagctatgctcacggggac 52961183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 18923934 - 18923983
Alignment:
Q  17 accctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    ||||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  18923934 accctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 18923983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 538379 - 538427
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||||| | |||||||| |||||||||||||    
T  538379 ccctgcatataataatgcattgttc-taccaactgaactatgctcacggg 538427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 3533023 - 3533071
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| || | | ||||||||||||||||||||    
T  3533023 ccctacatataataatgcattg-tcctactaactgagctatgctcacggg 3533071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 9768859 - 9768911
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| ||||||| || | ||||||||||||||||||||||||||||    
T  9768859 ccctgcatataacaatgcat-gtccctgccaactgagctatgctcacggggaca 9768911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 9769630 - 9769674
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctca 63  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||    
T  9769630 ccctacatataataatgca-tgtccctgccaactgagctatgctca 9769674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 15774362 - 15774410
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| || | ||||||||| ||||||||||||    
T  15774362 ccctacatataataatgcattg-tcctaccaactgagttatgctcacggg 15774410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 18003861 - 18003809
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| ||||||| || | ||||||||||||||||||||||||||||    
T  18003861 ccctgcatataacaatgcat-gtccctgccaactgagctatgctcacggggaca 18003809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 19976602 - 19976655
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||  || |||||| | ||||||||||||||||||||||||||||    
T  19976602 ccctgcatataaccatacattgtccctgccaactgagctatgctcacggggaca 19976655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 38019998 - 38020046
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  38019998 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 38020046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 40814816 - 40814864
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||| | ||||||||||||||||||||    
T  40814816 ccctgcatataataatgcattgt-cttactaactgagctatgctcacggg 40814864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 47939247 - 47939292
Alignment:
Q  17 accctacatataataatgcattgttcttgccaactgagctatgctc 62  Q
    ||||| ||||||| |||||||||| | |||||||||||||||||||    
T  47939247 accctgcatataacaatgcattgtccctgccaactgagctatgctc 47939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 48110574 - 48110526
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||||| | |||||||||||| |||||||||    
T  48110574 ccctgcatataataatgcattgttc-taccaactgagctacgctcacggg 48110526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 52833156 - 52833205
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| | ||||||||||| || |||||||||    
T  52833156 ccctgcatataataatgcattgtccctgccaactgagttaggctcacggg 52833205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 749636 - 749683
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacgg 66  Q
    |||||||||||||||||||||||||   ||||||||| |||||||||||    
T  749636 ccctacatataataatgcattgttc-gaccaactgagttatgctcacgg 749683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 4429532 - 4429579
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacgg 66  Q
    |||| |||||||||||||||||| ||  |||||||||||||||||||||    
T  4429532 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacgg 4429579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 24168629 - 24168676
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacgg 66  Q
    ||||||||||||||||||| ||||| | | |||||||||||||||||||    
T  24168629 ccctacatataataatgca-tgttcctacaaactgagctatgctcacgg 24168676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 6144010 - 6143958
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  6144010 ccctacatataataatgcattgtccctgccaactgagctatgctcacggggac 6143958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 9064911 - 9064858
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  9064911 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 9064858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 14981752 - 14981804
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  14981752 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 14981804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 2945641 - 2945588
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  2945641 ccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggaca 2945588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 33628992 - 33629040
Alignment:
Q  22 acatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||||||    
T  33628992 acatataataatgcattgtccctgccaactgagctatgttcacggggac 33629040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29284163 - 29284109
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    |||||||||||||||| |||||||| | ||||||||| |||||||| ||||||||    
T  29284163 ccctacatataataatacattgttcctaccaactgagttatgctcatggggacat 29284109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 18991529 - 18991481
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  18991529 ccctacatataataatgcattg-tcttaccaactgagctatgctcgcggg 18991481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 3448390 - 3448344
Alignment:
Q  25 tataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    ||||| |||||||||| | |||||| |||||||||||||||||||||    
T  3448390 tataacaatgcattgtccctgccaattgagctatgctcacggggaca 3448344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 4078701 - 4078655
Alignment:
Q  24 atataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||||| |||||||||| | |||||||||| ||||||||||||||||    
T  4078701 atataacaatgcattgtccatgccaactgaactatgctcacggggac 4078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 24470447 - 24470493
Alignment:
Q  24 atataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||    
T  24470447 atataataatgcattgtctctgccaactgagctatgcttacggggac 24470493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 9491785 - 9491833
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| || | ||||||||| ||||||||||||    
T  9491785 ccctacatataataatgcattg-tcctaccaactgagttatgctcacggg 9491833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 12089142 - 12089094
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  12089142 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 12089094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 22389800 - 22389848
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  22389800 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 22389848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 31741513 - 31741557
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctca 63  Q
    |||||||||||||||||||||| || | ||||||||||||||||||    
T  31741513 ccctacatataataatgcattg-tcctaccaactgagctatgctca 31741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 34524920 - 34524868
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| ||||||| || | ||||||||||||||||||||||||||||    
T  34524920 ccctgcatataacaatgcat-gtccctgccaactgagctatgctcacggggaca 34524868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 35190808 - 35190764
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctca 63  Q
    |||| |||||||||||||||||||| | ||||||||||||||||||    
T  35190808 ccctgcatataataatgcattgttc-taccaactgagctatgctca 35190764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 6219393 - 6219346
Alignment:
Q  24 atataataatgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    |||||||||||||| || | |||||||||||||||| ||||||||||||    
T  6219393 atataataatgcat-gtccctgccaactgagctatgttcacggggacat 6219346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 10346081 - 10346041
Alignment:
Q  143 aaaattatactttaaaaatgttaaaaacttcaattttcaat 183  Q
    ||||||||  |||||||| ||||||||||||||||||||||    
T  10346081 aaaattattttttaaaaaagttaaaaacttcaattttcaat 10346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 10455787 - 10455736
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| ||||||| |||| |||||||||| ||||||||||||||||    
T  10455787 ccctgcatataacaatgcat-gttcctgccaactgaactatgctcacggggac 10455736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 17115162 - 17115198
Alignment:
Q  136 taatgaaaaaattatactttaaaaatgttaaaaactt 172  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  17115162 taatgaaaaaattattctttaaaaatgtcaaaaactt 17115198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 19642602 - 19642645
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||    
T  19642602 catataataatgcattgtccta-ccaactgagctatgctcacggg 19642645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 26669709 - 26669760
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||||||||| |||||| || | | |||||||||||||||||||||||||    
T  26669709 ccctacatataattatgcat-gtccctaccaactgagctatgctcacggggac 26669760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 31411112 - 31411159
Alignment:
Q  19 cctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||| ||||| || |||||||| ||||||||||||    
T  31411112 cctacatataataatgca-tgttcctgtcaactgagttatgctcacggg 31411159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 10959178 - 10959124
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  10959178 ccctatatataataatgcattgtccctgccaactgagctatgctcacggggacat 10959124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 9625028 - 9624975
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  9625028 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 9624975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 27183731 - 27183784
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  27183731 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggaca 27183784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 14868730 - 14868678
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  14868730 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 14868678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 47191418 - 47191366
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  47191418 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 47191366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 41767818 - 41767871
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  41767818 ccctgcatataacaatgcattgttcctgccaactgaactatgctcacggggaca 41767871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 28226237 - 28226289
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  28226237 ccctgcatataataatgcattgttcctgccaactgagttatgttcacggggac 28226289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 39298022 - 39298069
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||    
T  39298022 catataataatgcattgtccccgccaactgagctatgctcacggggac 39298069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 34136808 - 34136763
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcac 64  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||    
T  34136808 ccctacatataataatgcattgttc-taccaactgagctatgctcac 34136763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 42824041 - 42824090
Alignment:
Q  24 atataataatgcattgttcttgccaactgagctatgctcacggggacatt 73  Q
    ||||||||||| ||||| | ||||||||||| ||||||||||||||||||    
T  42824041 atataataatgtattgtgcctgccaactgagttatgctcacggggacatt 42824090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 43774230 - 43774177
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| |||||||||| | ||||||||||||||| ||||||||||||    
T  43774230 ccctgcatataacaatgcattgtccctgccaactgagctatactcacggggaca 43774177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 48173328 - 48173284
Alignment:
Q  21 tacatataataatgcattgttcttgccaactgagctatgctcacgg 66  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  48173328 tacatataataatgcattgt-cttaccaactgagctatgctcacgg 48173284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 49639073 - 49639025
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| || | ||||||||||||||||||||||    
T  49639073 ccctacatataataatgcattg-tcctaccaactgagctatgctcacggg 49639025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 3784109 - 3784069
Alignment:
Q  24 atataataatgcattgttcttgccaactgagctatgctcac 64  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  3784109 atataataatgcattgtccctgccaactgagctatgctcac 3784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 11465720 - 11465672
Alignment:
Q  135 ttaatgaaaaaattatactttaaaaatgttaaaaacttcaattttcaat 183  Q
    ||||| |||||||||| ||||||||| || |||||||||||||||||||    
T  11465720 ttaataaaaaaattattctttaaaaaagtcaaaaacttcaattttcaat 11465672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 19137664 - 19137613
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| ||||||| |||| |||||||||||||||||||||||||||    
T  19137664 ccctgcatataacaatgcat-gttcctgccaactgagctatgctcacggggac 19137613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 36331776 - 36331824
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacgg 66  Q
    |||| |||||||||||||||||| | |||||| ||||||||||||||||    
T  36331776 ccctgcatataataatgcattgtccctgccaattgagctatgctcacgg 36331824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 36476404 - 36476352
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||| |||| |||||||||||||||    
T  36476404 ccctgcatataataatgcattgtccgtgccaattgagttatgctcacggggac 36476352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 38555077 - 38555129
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||||||||||||||   |||||||||| ||||||||||||||||    
T  38555077 ccctgcatataataatgcattgtctctgccaactgaactatgctcacggggac 38555129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 52030166 - 52030114
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||||||| |||||| | ||||||||||| |||||||||||||||    
T  52030166 ccctgcatataataatacattgtccctgccaactgagttatgctcacggggac 52030114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 7448413 - 7448464
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacgggga 69  Q
    |||| |||||||||||||||||| | |  |||||||||||||||||||||||    
T  7448413 ccctgcatataataatgcattgtccctatcaactgagctatgctcacgggga 7448464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 7456555 - 7456606
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacgggga 69  Q
    |||| |||||||||||||||||| | |  |||||||||||||||||||||||    
T  7456555 ccctgcatataataatgcattgtccctatcaactgagctatgctcacgggga 7456606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 16874240 - 16874294
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacatt 73  Q
    |||| ||||||| ||||||| || | ||||||||||||||||||||||||||||||    
T  16874240 ccctgcatataacaatgcat-gtccctgccaactgagctatgctcacggggacatt 16874294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 24559434 - 24559379
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacatt 73  Q
    |||| |||||||| ||||||| | | ||| ||||||||||||||||||||||||||    
T  24559434 ccctgcatataattatgcattatccctgctaactgagctatgctcacggggacatt 24559379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 31576556 - 31576509
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacg 65  Q
    |||| ||||||| |||||||||||| | ||||||||||||||||||||    
T  31576556 ccctgcatataacaatgcattgttcctaccaactgagctatgctcacg 31576509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 44976616 - 44976570
Alignment:
Q  21 tacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||| | || |||||||| ||||||||||||    
T  44976616 tacatataataatgcattgtccctgtcaactgagttatgctcacggg 44976570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 3955351 - 3955302
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| | || ||| |||||||||||||||||    
T  3955351 ccctgcatataataatgcattgtccctgtcaattgagctatgctcacggg 3955302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 13540014 - 13540062
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| || | ||||||||||||| ||||||||    
T  13540014 ccctacatataataatgcattg-tcctaccaactgagctatactcacggg 13540062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 33206802 - 33206754
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  33206802 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 33206754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 40557620 - 40557661
Alignment:
Q  25 tataataatgcattgttcttgccaactgagctatgctcacgg 66  Q
    ||||| |||||||||| ||||||||||||| |||||||||||    
T  40557620 tataacaatgcattgtccttgccaactgagttatgctcacgg 40557661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 46416281 - 46416321
Alignment:
Q  26 ataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  46416281 ataataatgcat-gtccttgccaactgagctatgctcacggg 46416321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 12236644 - 12236593
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||||||||||| || | |||||||||||||| ||||||||||||    
T  12236644 ccctgcatataataatgcat-gtccctgccaactgagctacgctcacggggac 12236593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 53705656 - 53705696
Alignment:
Q  32 atgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    ||||||||||||| |||||||||||| ||| ||||||||||    
T  53705656 atgcattgttcttaccaactgagctaagcttacggggacat 53705696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 36045184 - 36045233
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  36045184 ccctgcatataataatgcattgttcttgtcaactgagctatgctcacggg 36045233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 20735225 - 20735277
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||    
T  20735225 ccctacatataataatgcattgtccctgccaactgagctatgttcacggggac 20735277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 37303979 - 37303925
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    |||| ||||||||||| |||||| | |||||||||||||||||||||||||||||    
T  37303979 ccctgcatataataatacattgtccctgccaactgagctatgctcacggggacat 37303925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 1463916 - 1463864
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||| |||||    
T  1463916 ccctgcatataataatgcattgtccctgccaactgagctatgctcacagggac 1463864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 3102178 - 3102229
Alignment:
Q  19 cctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||||||| |||||||||| | |||||||||||||||||| ||||||||    
T  3102178 cctacatataacaatgcattgtccctgccaactgagctatgcttacggggac 3102229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 5156937 - 5156890
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||    
T  5156937 catataacaatgcattgttcatgtcaactgagctatgctcacggggac 5156890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 6447530 - 6447579
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| | ||||||||||| ||||||||||||    
T  6447530 ccctgcatataataatgcattgtccctgccaactgagttatgctcacggg 6447579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 6806690 - 6806743
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| ||||||||||   ||||||||||||||||||||||||||||    
T  6806690 ccctgcatataacaatgcattgtctctgccaactgagctatgctcacggggaca 6806743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 4674865 - 4674917
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | || ||||||||||||||||||| ||||    
T  4674865 ccctgcatataataatgcattgtccctgtcaactgagctatgctcacgaggac 4674917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 7147069 - 7147120
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||||||||||| || ||| |||||||||||||||||||||||||    
T  7147069 ccctgcatataataatgcat-gtccttaccaactgagctatgctcacggggac 7147120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 9963461 - 9963409
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||| | ||||||||||||||| |||||||||||    
T  9963461 ccctgcatataacaatgcattgtccctgccaactgagctatactcacggggac 9963409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 42618469 - 42618512
Alignment:
Q  24 atataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||    
T  42618469 atataataatgcattgtccctgccaactgaggtatgctcacggg 42618512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 72
Target Start/End: Complemental strand, 16844137 - 16844107
Alignment:
Q  42 cttgccaactgagctatgctcacggggacat 72  Q
    |||||||||||||||||||||||||||||||    
T  16844137 cttgccaactgagctatgctcacggggacat 16844107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 30119996 - 30119951
Alignment:
Q  25 tataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    ||||||||||||| || |||| |||||||||||||||||||||||||    
T  30119996 tataataatgcat-gtccttgtcaactgagctatgctcacggggaca 30119951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 31591953 - 31591907
Alignment:
Q  29 ataatgcattgttcttgccaactgagctatgctcacggggacattat 75  Q
    ||||||||||||||   |||||||||||||||||| |||||||||||    
T  31591953 ataatgcattgttcccaccaactgagctatgctcatggggacattat 31591907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 39046952 - 39046994
Alignment:
Q  141 aaaaaattatactttaaaaatgttaaaaacttcaattttcaat 183  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||    
T  39046952 aaaaaattattctttaaaaacgttaaaaactttaattttcaat 39046994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 843418 - 843466
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| || | ||||||||| ||||||||||||    
T  843418 ccctacatataataatgcattg-tcataccaactgagatatgctcacggg 843466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 9176836 - 9176884
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||| ||||||||| ||||||||||||    
T  9176836 ccctgcatataataatgcattgtcctt-ccaactgagttatgctcacggg 9176884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 17242709 - 17242746
Alignment:
Q  32 atgcattgttcttgccaactgagctatgctcacgggga 69  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  17242709 atgcattatccttgccaactgagctatgctcacgggga 17242746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 18872566 - 18872518
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  18872566 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 18872518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 37417179 - 37417228
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||| ||||| | |||||||||||||| |||||||||    
T  37417179 ccctgcatataataatgtattgtccctgccaactgagctaagctcacggg 37417228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 4009907 - 4009859
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||||| ||||||||||| ||| |||||||||||| ||||||| |||||    
T  4009907 catatattaatgcattgtccttaccaactgagctaagctcacgaggaca 4009859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 4666501 - 4666544
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||| | |||| |||||||||||||||||    
T  4666501 catataataatgcattgttc-taccaattgagctatgctcacggg 4666544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 4794014 - 4793962
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||| |||||||||||| | | |||| ||||||||||||||||||||    
T  4794014 ccctgcatattataatgcattgtccctaccaattgagctatgctcacggggac 4793962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 4878643 - 4878595
Alignment:
Q  135 ttaatgaaaaaattatactttaaaaatgttaaaaacttcaattttcaat 183  Q
    ||||| |||||||||| |||||||||  ||||| |||||||||||||||    
T  4878643 ttaataaaaaaattattctttaaaaaaattaaagacttcaattttcaat 4878595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 10106675 - 10106624
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||||||||||||| || || | ||||||||||||||||||| |||||||    
T  10106675 ccctacatataataatggat-gtccctgccaactgagctatgctcgcggggac 10106624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 40250232 - 40250279
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    ||||||| ||||||| |||  ||||||||||||||||||||||||||||    
T  40250232 catataacaatgcat-gttactgccaactgagctatgctcacggggaca 40250279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 42265447 - 42265495
Alignment:
Q  135 ttaatgaaaaaattatactttaaaaatgttaaaaacttcaattttcaat 183  Q
    ||||| |||||||||| ||||||||| || ||||| |||||||||||||    
T  42265447 ttaataaaaaaattattctttaaaaaagtcaaaaatttcaattttcaat 42265495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 4855 - 4907
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  4855 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 4907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 25071 - 25019
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  25071 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 25019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 451425 - 451477
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  451425 ccctacatataacaatgcattgtccttgctaactgagctatgctcacggggac 451477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 440444 - 440405
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctat 58  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  440444 ccctacatataataatgca-tgttcctgccaactgagctat 440405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 2800064 - 2800012
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  2800064 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 2800012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 10292397 - 10292345
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  10292397 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 10292345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 21133574 - 21133621
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  21133574 catataataatgcattgttcctgccaactgagttatgctcacggggac 21133621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 2696578 - 2696524
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    |||| |||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  2696578 ccctgcatataataatgcattgtccctgccaactgagttatgctcacggggacat 2696524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 38790623 - 38790676
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  38790623 ccctgcatataataatgcattgtccctgccaactgagttatgctcacggggaca 38790676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 31129345 - 31129297
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||||||||||||||||| | |||||||||||||||| |||||||||||    
T  31129345 catataataatgcattgtccctgccaactgagctatgatcacggggaca 31129297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 1588812 - 1588757
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacatt 73  Q
    |||| |||||||||||||||||| | |||||||| |||||||||||| ||||||||    
T  1588812 ccctgcatataataatgcattgtccctgccaactaagctatgctcacagggacatt 1588757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 14012657 - 14012604
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| |||||||||| | |||||||||| |||||||||||||||||    
T  14012657 ccctgcatataacaatgcattgtccctgccaactgaactatgctcacggggaca 14012604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 29108706 - 29108659
Alignment:
Q  19 cctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  29108706 cctacatataataatgcattgtccta-ccaactgagctatgctcacggg 29108659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 32878693 - 32878653
Alignment:
Q  32 atgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  32878693 atgcattgttcttaccaactgagctaagctcacggggacat 32878653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 36815519 - 36815566
Alignment:
Q  24 atataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||||||||||||||||   || |||||||||||||||||||||||||    
T  36815519 atataataatgcattgtctctgtcaactgagctatgctcacggggaca 36815566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 41225718 - 41225763
Alignment:
Q  21 tacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||    
T  41225718 tacatataataatgcattgtccta-ccaactgagctatgctcacggg 41225763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 7649574 - 7649526
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| || | |||| |||||||||||||||||    
T  7649574 ccctacatataataatgcattg-tcctaccaagtgagctatgctcacggg 7649526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 9525002 - 9524954
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  9525002 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 9524954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 14010826 - 14010870
Alignment:
Q  22 acatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  14010826 acatataataatgcactgt-cttaccaactgagctatgctcacggg 14010870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 15042415 - 15042463
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  15042415 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 15042463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 23857374 - 23857422
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  23857374 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 23857422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 24608533 - 24608581
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  24608533 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 24608581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 28465663 - 28465615
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  28465663 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 28465615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 39484420 - 39484468
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  39484420 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 39484468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 43468755 - 43468803
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||| |||||||||| ||  ||||||||||||||||||||||    
T  43468755 ccctacatataacaatgcattgtccta-ccaactgagctatgctcacggg 43468803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 22426446 - 22426398
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacgg 66  Q
    ||||||||||||||||||||||| | || ||| |||| |||||||||||    
T  22426446 ccctacatataataatgcattgtccctgtcaattgagttatgctcacgg 22426398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 35301213 - 35301253
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctat 58  Q
    |||| |||||||||||||||||| | |||||||||||||||    
T  35301213 ccctgcatataataatgcattgtccctgccaactgagctat 35301253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 37128774 - 37128730
Alignment:
Q  26 ataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||||||||||| | |||||| |||||||||||||| |||||    
T  37128774 ataataatgcattgtccctgccaattgagctatgctcacagggac 37128730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 44019581 - 44019541
Alignment:
Q  32 atgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    ||||||||||||| |||||||||||| | ||||||||||||    
T  44019581 atgcattgttcttaccaactgagctaagttcacggggacat 44019541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 41139132 - 41139080
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  41139132 ccctgcatataataatgcattgtccctgccaactgagctatgctcacggggac 41139080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 16814742 - 16814688
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacatt 73  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||    
T  16814742 ccctacatataataatgcat-gttcttgccaactgagctatgttcacagggacatt 16814688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 14818415 - 14818468
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  14818415 ccctgcatataataatgcactgtccctgccaactgagctatgctcacggggaca 14818468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 15265413 - 15265466
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  15265413 ccctgcatataataatgcactgtccctgccaactgagctatgctcacggggaca 15265466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 41417325 - 41417378
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  41417325 ccctgcatataatgatgcactgttcctgccaactgagctatgctcacggggaca 41417378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 21285403 - 21285455
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||| | |||||||||||||||||||||||||||    
T  21285403 ccctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 21285455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 31475890 - 31475939
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||| ||| | ||||||||||||||||||||||||    
T  31475890 ccctgcatataataatgcaatgtccctgccaactgagctatgctcacggg 31475939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 34960975 - 34961012
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgc 60  Q
    |||||||||||||||||||| |||||||||||||||||    
T  34960975 catataataatgcattgttcatgccaactgagctatgc 34961012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 45417518 - 45417470
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  45417518 ccctgcatataataatacattgttct-gccaactgagctatgctcacggg 45417470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 15912820 - 15912768
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||||| |||||| |||||||| |||||||||||    
T  15912820 ccctgcatataacaatgcattgttcctgccaattgagctattctcacggggac 15912768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 46915008 - 46914960
Alignment:
Q  19 cctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| ||||||||||| ||||||| ||||||||||| ||||||||||||    
T  46915008 cctatatataataatgtattgttcgtgccaactgagttatgctcacggg 46914960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 4169116 - 4169069
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||| ||| |||||| | |||||||||||||||||||||||||||    
T  4169116 catataacaatacattgtccctgccaactgagctatgctcacggggac 4169069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 19126776 - 19126729
Alignment:
Q  24 atataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    ||||||||||||||||||| | |||||||||||||||  |||||||||    
T  19126776 atataataatgcattgttcctaccaactgagctatgccgacggggaca 19126729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 29658322 - 29658377
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacatt 73  Q
    |||| ||||||| ||||||||||   |||||| |||||||||||||||||||||||    
T  29658322 ccctgcatataacaatgcattgtcgctgccaattgagctatgctcacggggacatt 29658377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 48175006 - 48174960
Alignment:
Q  24 atataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||||    
T  48175006 atataataatgcat-gtccttgccaactgagctatactcacggggaca 48174960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 7392361 - 7392410
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggacatt 73  Q
    ||||||| ||||||| |||| |||||| |||||||||||||||||||||||    
T  7392361 catataacaatgcat-gttcctgccaattgagctatgctcacggggacatt 7392410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 24304333 - 24304387
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    |||| |||||||||||||||||||| || ||| | ||||||||| ||||||||||    
T  24304333 ccctgcatataataatgcattgttcctgtcaattaagctatgcttacggggacat 24304387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 30566545 - 30566499
Alignment:
Q  21 tacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||    
T  30566545 tacatataacaatgcattgtccctgccaaccgagctatgctcacggg 30566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 35919724 - 35919769
Alignment:
Q  21 tacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||| |||  |||||||||||||||||||||    
T  35919724 tacatataataatgcattgt-cttaacaactgagctatgctcacggg 35919769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 23470550 - 23470594
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctca 63  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||    
T  23470550 ccctacatataataatacat-gttcatgccaactgagctatgctca 23470594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 27674861 - 27674902
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcac 64  Q
    ||||||| |||||||||| ||||| |||||||||||||||||    
T  27674861 catataacaatgcattgtccttgcgaactgagctatgctcac 27674902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 29710150 - 29710198
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| || | ||||||||||||| ||||||||    
T  29710150 ccctacatataataatgcattg-tcctaccaactgagctatactcacggg 29710198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 35195888 - 35195836
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||||||||||| || | |||||||||||||||||| |||||||||    
T  35195888 ccctgcatataataatgcat-gtccctgccaactgagctatgcttacggggaca 35195836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 49012443 - 49012395
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  49012443 cccttcatataataatgcattgtccta-ccaactgagctatgctcacggg 49012395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 20527479 - 20527531
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||| | ||||||||||||||| ||||| |||||    
T  20527479 ccctgcatataacaatgcattgtccctgccaactgagctatactcacagggac 20527531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 37917437 - 37917386
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||| |||||| |||| | |||||||||||||||||||||||||    
T  37917437 ccctgcatataattatgcat-gttcctaccaactgagctatgctcacggggac 37917386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 38451908 - 38451856
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||| | || |||||||||||||||||| |||||    
T  38451908 ccctgcatataacaatgcattgtccctgtcaactgagctatgctcacagggac 38451856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 43970908 - 43970951
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||    
T  43970908 catataataatgcattgttc-taccaactgagttatgctcacggg 43970951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 29035021 - 29034967
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacat 72  Q
    |||| |||||||||||||||||| | |||||| ||||||||||||||||||||||    
T  29035021 ccctgcatataataatgcattgtccctgccaagtgagctatgctcacggggacat 29034967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 2114485 - 2114533
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  2114485 ccctacatataataatgcattgttc-taccaactgagctatgctcacggg 2114533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 21970489 - 21970542
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| |||||||||||||||||| | || |||||||||||||||||||||||||    
T  21970489 ccctgcatataataatgcattgtccctgtcaactgagctatgctcacggggaca 21970542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 2304335 - 2304283
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||||||||||||||| |||||| | |||||||||||||| ||||||||||||    
T  2304335 ccctacatataataatacattgtccctgccaactgagctaagctcacggggac 2304283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 2935857 - 2935813
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  2935857 catataacaatgcattgttcctgccaactgagctatgctcacggg 2935813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 34034391 - 34034343
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  34034391 catataataatgtattgtccctgccaactgagctatgctcacggggaca 34034343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 43870993 - 43870946
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  43870993 catataataatgcattgtccttgccaaccgagctatgctcatggggac 43870946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 11133121 - 11133068
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| |||||||||| | | ||||||||||||||||||||||||||    
T  11133121 ccctgcatataacaatgcattgtccctaccaactgagctatgctcacggggaca 11133068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 20122525 - 20122573
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| || | ||||||||||||||||||||||    
T  20122525 ccctacatataataatgcattg-tcctaccaactgagctatgctcacggg 20122573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 29664648 - 29664596
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||| | |||||| ||||||||||||||||||||    
T  29664648 ccctgcatataacaatgcattgtccctgccaattgagctatgctcacggggac 29664596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 35456841 - 35456888
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||||| ||||||||||||||| |||||||||||| ||||||| ||||    
T  35456841 catatattaatgcattgttcttaccaactgagctaagctcacgaggac 35456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 32988388 - 32988347
Alignment:
Q  25 tataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||| ||| ||||||||||||||||||||||    
T  32988388 tataataatgcattgt-cttaccaactgagctatgctcacggg 32988347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 33045040 - 33045074
Alignment:
Q  33 tgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||| ||||||||||||||||||||||    
T  33045040 tgcattgttcttaccaactgagctatgctcacggg 33045074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 580833 - 580881
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  580833 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 580881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 3179369 - 3179321
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||||| | ||||||||| ||||||||||||    
T  3179369 ccctgcatataataatgcattgttc-taccaactgagttatgctcacggg 3179321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 71
Target Start/End: Complemental strand, 5772882 - 5772853
Alignment:
Q  42 cttgccaactgagctatgctcacggggaca 71  Q
    ||||||||||||||||||||||||||||||    
T  5772882 cttgccaactgagctatgctcacggggaca 5772853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 8234842 - 8234890
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    ||||||||||||||||| ||||| ||  ||||||||||||||||||||||    
T  8234842 ccctacatataataatgtattgtccta-ccaactgagctatgctcacggg 8234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 17239946 - 17239902
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctca 63  Q
    |||| |||||||||||||||||||| | ||||||||||||||||||    
T  17239946 ccctgcatataataatgcattgttc-taccaactgagctatgctca 17239902  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 18364425 - 18364473
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||||| | |||||| |||||||||||||||    
T  18364425 ccctgcatataataatgcattgttc-taccaactcagctatgctcacggg 18364473  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 19072446 - 19072487
Alignment:
Q  20 ctacatataataatgcattgttcttgccaactgagctatgct 61  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||    
T  19072446 ctacatataataatgcattattcttaccaactgagttatgct 19072487  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 71
Target Start/End: Complemental strand, 22355105 - 22355076
Alignment:
Q  42 cttgccaactgagctatgctcacggggaca 71  Q
    ||||||||||||||||||||||||||||||    
T  22355105 cttgccaactgagctatgctcacggggaca 22355076  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 30474245 - 30474293
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||| |||||||||||||||||| ||  ||||||||||||||||||||||    
T  30474245 ccctgcatataataatgcattgtccta-ccaactgagctatgctcacggg 30474293  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 32527127 - 32527168
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatg 59  Q
    |||| |||||||||||||||||| | ||||||||||||||||    
T  32527127 ccctgcatataataatgcattgtccctgccaactgagctatg 32527168  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 36520830 - 36520878
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    |||||||||||||||||||||| || | |||||||||||| |||||||||    
T  36520830 ccctacatataataatgcattg-tcctaccaactgagctacgctcacggg 36520878  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 40044129 - 40044174
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctca 63  Q
    |||| ||||||||||| |||||| ||| ||||||||||||||||||    
T  40044129 ccctgcatataataatacattgtccttaccaactgagctatgctca 40044174  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 7052814 - 7052766
Alignment:
Q  23 catataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    ||||| || ||||||||| ||| |||||||||||| |||||||||||||    
T  7052814 catattattatgcattgtccttaccaactgagctaagctcacggggaca 7052766  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 15392262 - 15392309
Alignment:
Q  19 cctacatataataatgcattgttcttgccaactgagctatgctcacggg 67  Q
    ||||||||||||||||||||| || | ||||||||| ||||||||||||    
T  15392262 cctacatataataatgcattg-tcctaccaactgagttatgctcacggg 15392309  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 36277752 - 36277803
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||||||||||| ||||||| ||   |||||||||||||||||||||||||||    
T  36277752 ccctacatataacaatgcat-gtcactgccaactgagctatgctcacggggac 36277803  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 44187749 - 44187701
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacgg 66  Q
    |||| |||||||||||||||| | | |||||||||| ||||||||||||    
T  44187749 ccctgcatataataatgcattatccctgccaactgaactatgctcacgg 44187701  T

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Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 12610 - 12558
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | ||||||||||||||||||||| |||||    
T  12610 ccctgcatataataatgcattgtccctgccaactgagctatgctcacagggac 12558  T

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Target: scaffold2098 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold2098
Description:

Target: scaffold2098; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 663 - 715
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||||||||||| |||||||||| | ||||||||||||||| ||||| |||||    
T  663 ccctacatataacaatgcattgtccctgccaactgagctatactcacagggac 715  T

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Target: scaffold0308 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 7121 - 7069
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| |||||||||||||||||| | |  ||||||||||||||||||||||||    
T  7121 ccctgcatataataatgcattgtccctaacaactgagctatgctcacggggac 7069  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 21895 - 21843
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||||||| |||||||  ||||||||||||||| |||||||||||    
T  21895 ccctgcatataataatacattgtttctgccaactgagctatactcacggggac 21843  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 204622 - 204583
Alignment:
Q  32 atgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  204622 atgcattgttcatgccaactgagctatgctcacgaggaca 204583  T

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Target: scaffold0712 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 4565 - 4509
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacattat 75  Q
    |||| ||||||| ||||||| || | ||||||||||||||||||||||| ||||||||    
T  4565 ccctgcatataacaatgcat-gtccctgccaactgagctatgctcacggagacattat 4509  T

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Target: scaffold0709 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 4585 - 4529
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggacattat 75  Q
    |||| ||||||| ||||||| || | ||||||||||||||||||||||| ||||||||    
T  4585 ccctgcatataacaatgcat-gtccctgccaactgagctatgctcacggagacattat 4529  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 34083 - 34135
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggaca 71  Q
    |||| ||||||| ||||||| || | ||||||||||||||||||||||||||||    
T  34083 ccctgcatataacaatgcat-gtccctgccaactgagctatgctcacggggaca 34135  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 25727 - 25686
Alignment:
Q  32 atgcattgttcttgccaactgagctatgctcacggggacatt 73  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  25727 atgcattgttcttaccaactgagctaagctcaaggggacatt 25686  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 108411 - 108452
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatg 59  Q
    |||| |||||||||||||||||||| |||||| |||||||||    
T  108411 ccctgcatataataatgcattgttcctgccaattgagctatg 108452  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 1084 - 1033
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    ||||||||||||| |||||| || | | |||||||||||||||||||||||||    
T  1084 ccctacatataattatgcat-gtccctaccaactgagctatgctcacggggac 1033  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 17981 - 18033
Alignment:
Q  18 ccctacatataataatgcattgttcttgccaactgagctatgctcacggggac 70  Q
    |||| ||||||| |||||||||| | | |||| ||||||||||||||||||||    
T  17981 ccctgcatataacaatgcattgtccctaccaattgagctatgctcacggggac 18033  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 67511 - 67463
Alignment:
Q  135 ttaatgaaaaaattatactttaaaaatgttaaaaacttcaattttcaat 183  Q
    ||||| || ||||||| ||||||||| ||||||||||| ||||||||||    
T  67511 ttaataaagaaattattctttaaaaaggttaaaaactttaattttcaat 67463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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