View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9912_high_14 (Length: 252)

Name: NF9912_high_14
Description: NF9912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9912_high_14
NF9912_high_14
[»] chr5 (9 HSPs)
chr5 (123-252)||(35779323-35779452)
chr5 (13-77)||(35779504-35779568)
chr5 (154-225)||(9049390-9049461)
chr5 (154-225)||(13239800-13239871)
chr5 (153-215)||(16137074-16137137)
chr5 (181-232)||(28277528-28277579)
chr5 (154-225)||(28278365-28278436)
chr5 (154-207)||(16135490-16135544)
chr5 (171-225)||(42310000-42310054)
[»] chr2 (5 HSPs)
chr2 (179-227)||(4561135-4561183)
chr2 (154-225)||(24398106-24398178)
chr2 (154-225)||(45726978-45727049)
chr2 (154-215)||(5723304-5723365)
chr2 (153-225)||(7815320-7815392)
[»] chr8 (4 HSPs)
chr8 (154-214)||(3073921-3073981)
chr8 (154-225)||(12702682-12702753)
chr8 (154-225)||(15212835-15212906)
chr8 (154-215)||(34254379-34254440)
[»] chr7 (4 HSPs)
chr7 (154-225)||(23555089-23555160)
chr7 (154-225)||(5116653-5116725)
chr7 (154-226)||(34310764-34310836)
chr7 (162-213)||(38280867-38280919)
[»] chr4 (6 HSPs)
chr4 (154-225)||(27417013-27417084)
chr4 (154-225)||(40632494-40632565)
chr4 (154-225)||(56178685-56178756)
chr4 (155-225)||(4588008-4588078)
chr4 (154-225)||(26699490-26699562)
chr4 (181-225)||(44570441-44570485)
[»] chr3 (3 HSPs)
chr3 (154-225)||(7762314-7762385)
chr3 (154-225)||(30236174-30236245)
chr3 (153-225)||(51398863-51398935)
[»] chr1 (3 HSPs)
chr1 (154-225)||(31659287-31659358)
chr1 (181-222)||(1050519-1050560)
chr1 (182-214)||(48260373-48260405)
[»] scaffold0219 (1 HSPs)
scaffold0219 (154-225)||(27490-27562)
[»] scaffold0053 (1 HSPs)
scaffold0053 (181-225)||(25102-25146)


Alignment Details
Target: chr5 (Bit Score: 126; Significance: 4e-65; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 35779452 - 35779323
Alignment:
Q  123 gcccaaatttgatccacatcgcaaaagaggaatctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35779452 gcccaaatttgatccacatcgcaaaagaggaatctctccaattcattgtcaataaatttttacaaagagaaaccaaaatgttacaagaaattatcttcaa 35779353  T
Q  223 caataacaacttgtatgtttactctttgca 252  Q
    ||||||||||||||||||||||||||||||    
T  35779352 caataacaacttgtatgtttactctttgca 35779323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 35779568 - 35779504
Alignment:
Q  13 aaggtgatcaaacaagcgaagacaaaactacacgataaaggagaataaagaaaaatatgacaata 77  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  35779568 aaggtgatcaaacaagcaaagacaaaacaacacgataaaggagaataaagaaaaatatgacaata 35779504  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 9049390 - 9049461
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || ||||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||    
T  9049390 atctctccaatccactgtcaatgagttcttacaaagagatacaaaatggttacaagaaattagcttcaacaa 9049461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 13239871 - 13239800
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||    
T  13239871 atctctccaatccactatcaatgagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaa 13239800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 16137137 - 16137074
Alignment:
Q  153 aatctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaatta 215  Q
    |||||||| |||||| | ||||| |||| ||| |||||||||||||||| ||||||||||||||    
T  16137137 aatctctcaaattcactatcaatgagttgttttcaaagagaaaccaaaaggttacaagaaatta 16137074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 28277579 - 28277528
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaataacaac 232  Q
    |||| |||||||||||||||||||| ||||||||| | | ||||||||||||    
T  28277579 tttagaaagagaaaccaaaatgttataagaaattaaccttaacaataacaac 28277528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 28278436 - 28278365
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | ||||| |||||||||||||||| || ||   |||||||||||||| |||||||||    
T  28278436 atctctccaatccactatcaatgagtttttacaaagagatacaaatgggttacaagaaattagcttcaacaa 28278365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 16135544 - 16135490
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttaca 207  Q
    |||||||||||||||| | ||| |||| |||||||||||||||||||| ||||||    
T  16135544 atctctccaattcattatgaatgagttatttacaaagagaaaccaaaaggttaca 16135490  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 42310000 - 42310054
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    |||||||||| ||||||||||| || |||  |||||||||||||| |||||||||    
T  42310000 tcaataagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaa 42310054  T

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Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 4561183 - 4561135
Alignment:
Q  179 tttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaata 227  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||||    
T  4561183 tttttacaaagagatacaaaaatgttacaagaaattagcttcaacaata 4561135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 24398178 - 24398106
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| |||| ||||| |||| |||||||||||| || |||  |||||||||||||| |||||||||    
T  24398178 atctctccaatccattatcaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaacaa 24398106  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 45727049 - 45726978
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | ||||| |||| ||||||||||| || || | |||||||||||||| |||||||||    
T  45727049 atctctccaatccactatcaatgagttcttacaaagagatacaaataggttacaagaaattagcttcaacaa 45726978  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 5723304 - 5723365
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaatta 215  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||| ||||||||||||||    
T  5723304 atctctccaatccactatcaatgagttcttacaaagagatacaaaaaggttacaagaaatta 5723365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 7815320 - 7815392
Alignment:
Q  153 aatctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    |||||||||||| || | | ||| |||| ||||||||||| || |||  |||||||||||||| |||||||||    
T  7815320 aatctctccaatccactataaatgagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaa 7815392  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 3073921 - 3073981
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaatt 214  Q
    ||||||||||  |||| ||||| |||| ||||||||||| || ||||||||||||||||||    
T  3073921 atctctccaagccattatcaatgagttcttacaaagagatacaaaaatgttacaagaaatt 3073981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 12702682 - 12702753
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||    
T  12702682 atctctccaatccaatatcaatgagttcttacaaagagacacaaaagggttacaagaaattagcttcaacaa 12702753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 15212906 - 15212835
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| |||| ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||    
T  15212906 atctctccaatccattatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa 15212835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 34254379 - 34254440
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaatta 215  Q
    ||||||||||| || | |||||||||| ||||||||||| || |||  ||||||||||||||    
T  34254379 atctctccaatccactatcaataagttcttacaaagagatacaaaagggttacaagaaatta 34254440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 23555160 - 23555089
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | ||||| |||| ||||||||||  || ||| ||||||||||||||| |||||||||    
T  23555160 atctctccaatccactatcaatgagttcttacaaagaggtacaaaagtgttacaagaaattagcttcaacaa 23555089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 5116725 - 5116653
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    |||||||||||||| | ||||| |||| |||||||||||| || |||   |||||| ||||||||||||||||    
T  5116725 atctctccaattcactatcaatgagttctttacaaagagatacaaaaggtttacaataaattatcttcaacaa 5116653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 34310764 - 34310836
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaat 226  Q
    ||||||||||| || | ||||| |||| ||||||| ||| || ||  ||||||||||||||| ||||||||||    
T  34310764 atctctccaatccactatcaatgagttcttacaaaaagatacaaatgtgttacaagaaattagcttcaacaat 34310836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 38280919 - 38280867
Alignment:
Q  162 aattcattgtcaataagttttt-acaaagagaaaccaaaatgttacaagaaat 213  Q
    |||| ||||||||| |||| || ||||||||||||||||| ||||||||||||    
T  38280919 aatttattgtcaatgagttcttcacaaagagaaaccaaaaagttacaagaaat 38280867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 27417013 - 27417084
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | ||||| |||||||||||||||| || ||   |||||||||||||| |||||||||    
T  27417013 atctctccaatccactatcaatgagtttttacaaagagatacaaatgggttacaagaaattagcttcaacaa 27417084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 40632565 - 40632494
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | ||||| |||| ||||||||||| || || | |||||||||||||| |||||||||    
T  40632565 atctctccaatccactatcaatgagttcttacaaagagatacaaataggttacaagaaattagcttcaacaa 40632494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 56178685 - 56178756
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||    
T  56178685 atctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagcttcaacaa 56178756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 4588078 - 4588008
Alignment:
Q  155 tctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    |||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||    
T  4588078 tctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagcttcaacaa 4588008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 26699490 - 26699562
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| |||| | ||| |||| |||||||||||| || |||  |||||||||||||| |||||||||    
T  26699490 atctctccaatccattataaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaa 26699562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 44570441 - 44570485
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    |||||||||||| || |||||||||||||||||||  ||||||||    
T  44570441 tttacaaagagatacaaaaatgttacaagaaattagtttcaacaa 44570485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 7762385 - 7762314
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||    
T  7762385 atctctccaatccactatcaatgagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaa 7762314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 30236245 - 30236174
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | ||||| |||| ||||||||||| || || | |||||||||||||| |||||||||    
T  30236245 atctctccaatccactatcaatgagttcttacaaagagatacaaataggttacaagaaattagcttcaacaa 30236174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 51398935 - 51398863
Alignment:
Q  153 aatctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    |||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||    
T  51398935 aatctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa 51398863  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 31659358 - 31659287
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | |||||||||| ||||||||||| || ||   |||||||||||||| |||||||||    
T  31659358 atctctccaatccactatcaataagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa 31659287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 1050519 - 1050560
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaa 222  Q
    |||||||||||| || ||||||||||||||||||| ||||||    
T  1050519 tttacaaagagacacaaaaatgttacaagaaattagcttcaa 1050560  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 48260405 - 48260373
Alignment:
Q  182 ttacaaagagaaaccaaaatgttacaagaaatt 214  Q
    ||||||||||||||||||||||||||| |||||    
T  48260405 ttacaaagagaaaccaaaatgttacaataaatt 48260373  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 27490 - 27562
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    ||||||||||| || | |||||||||| |||||||||||| || ||   |||||||||||||| |||||||||    
T  27490 atctctccaatccactatcaataagttatttacaaagagatacaaatgagttacaagaaattagcttcaacaa 27562  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 25146 - 25102
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaa 225  Q
    |||||||||||| || |||| |||||||||||||| |||||||||    
T  25146 tttacaaagagatacaaaaaggttacaagaaattaccttcaacaa 25102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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