View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9913A_low_170 (Length: 279)

Name: NF9913A_low_170
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9913A_low_170
NF9913A_low_170
[»] chr1 (32 HSPs)
chr1 (142-279)||(44241442-44241579)
chr1 (142-278)||(1174692-1174828)
chr1 (140-278)||(4599615-4599753)
chr1 (142-279)||(39053338-39053475)
chr1 (142-279)||(39059710-39059847)
chr1 (142-279)||(6238740-6238877)
chr1 (142-279)||(9869190-9869327)
chr1 (142-279)||(11913262-11913399)
chr1 (142-279)||(42091981-42092118)
chr1 (142-279)||(45015866-45016003)
chr1 (142-278)||(26621556-26621692)
chr1 (142-279)||(31072403-31072540)
chr1 (142-279)||(29001816-29001953)
chr1 (142-279)||(44916423-44916560)
chr1 (142-266)||(32797821-32797945)
chr1 (142-278)||(41297603-41297739)
chr1 (142-278)||(41305514-41305650)
chr1 (173-279)||(27240161-27240267)
chr1 (142-272)||(43686721-43686851)
chr1 (142-278)||(41299188-41299324)
chr1 (142-278)||(1115982-1116121)
chr1 (142-221)||(23762336-23762415)
chr1 (206-279)||(5445028-5445101)
chr1 (151-277)||(47646755-47646883)
chr1 (148-254)||(23251460-23251568)
chr1 (231-279)||(23764521-23764569)
chr1 (147-254)||(5357752-5357861)
chr1 (147-254)||(28413678-28413787)
chr1 (147-254)||(39806165-39806274)
chr1 (147-254)||(45620149-45620258)
chr1 (164-254)||(38672788-38672880)
chr1 (146-190)||(9316137-9316181)
[»] chr8 (17 HSPs)
chr8 (142-279)||(11358193-11358330)
chr8 (142-279)||(36425730-36425867)
chr8 (142-279)||(7311434-7311571)
chr8 (142-279)||(8013320-8013457)
chr8 (142-279)||(36005482-36005619)
chr8 (142-279)||(36021799-36021936)
chr8 (142-279)||(36076052-36076189)
chr8 (142-279)||(41242116-41242253)
chr8 (142-279)||(6464576-6464713)
chr8 (142-266)||(16710668-16710792)
chr8 (142-279)||(12768829-12768966)
chr8 (142-279)||(26250591-26250728)
chr8 (142-278)||(15012474-15012610)
chr8 (142-271)||(1238307-1238436)
chr8 (142-278)||(31017470-31017608)
chr8 (142-262)||(45068416-45068536)
chr8 (147-254)||(7933931-7934040)
[»] chr7 (34 HSPs)
chr7 (142-279)||(37026133-37026270)
chr7 (142-279)||(3924093-3924230)
chr7 (142-279)||(6020864-6021001)
chr7 (142-279)||(8185392-8185529)
chr7 (142-279)||(8192952-8193089)
chr7 (142-279)||(39432992-39433129)
chr7 (142-279)||(48353480-48353617)
chr7 (142-272)||(9642916-9643046)
chr7 (142-279)||(2446731-2446868)
chr7 (142-279)||(5049912-5050049)
chr7 (142-279)||(5056307-5056444)
chr7 (142-279)||(6795523-6795660)
chr7 (142-279)||(48347096-48347233)
chr7 (142-279)||(23612474-23612611)
chr7 (142-279)||(36875630-36875767)
chr7 (142-279)||(1379032-1379169)
chr7 (142-279)||(8142446-8142583)
chr7 (142-279)||(14298985-14299122)
chr7 (142-279)||(26601997-26602134)
chr7 (142-278)||(19089894-19090030)
chr7 (1-144)||(42422112-42422255)
chr7 (142-279)||(1948633-1948770)
chr7 (142-279)||(14287800-14287937)
chr7 (142-279)||(15914723-15914860)
chr7 (142-279)||(21642603-21642740)
chr7 (142-275)||(33850643-33850776)
chr7 (145-278)||(45433671-45433805)
chr7 (142-279)||(15949244-15949381)
chr7 (142-216)||(13774130-13774204)
chr7 (147-260)||(21901193-21901308)
chr7 (147-208)||(27954243-27954303)
chr7 (147-190)||(28442628-28442671)
chr7 (147-254)||(10831130-10831239)
chr7 (147-254)||(11024922-11025031)
[»] chr4 (16 HSPs)
chr4 (142-279)||(55462772-55462909)
chr4 (143-279)||(37368315-37368451)
chr4 (142-279)||(8103967-8104104)
chr4 (142-279)||(16838359-16838496)
chr4 (142-279)||(27590390-27590527)
chr4 (142-272)||(13594200-13594330)
chr4 (142-279)||(17456940-17457077)
chr4 (142-278)||(7780493-7780629)
chr4 (142-279)||(41373072-41373209)
chr4 (142-279)||(16405427-16405568)
chr4 (142-279)||(30211536-30211673)
chr4 (142-279)||(30238345-30238482)
chr4 (142-279)||(36754791-36754928)
chr4 (142-279)||(5660549-5660686)
chr4 (147-254)||(2947953-2948062)
chr4 (165-254)||(13003809-13003900)
[»] chr3 (18 HSPs)
chr3 (142-279)||(24179159-24179296)
chr3 (142-279)||(6036351-6036488)
chr3 (142-279)||(27501967-27502104)
chr3 (142-279)||(9570548-9570685)
chr3 (142-279)||(9577050-9577187)
chr3 (142-279)||(10941304-10941441)
chr3 (142-279)||(32746455-32746592)
chr3 (142-279)||(43995162-43995300)
chr3 (142-272)||(13015078-13015208)
chr3 (142-279)||(25893316-25893458)
chr3 (142-279)||(4311486-4311623)
chr3 (142-267)||(23068562-23068686)
chr3 (152-279)||(20651135-20651262)
chr3 (142-279)||(43931667-43931799)
chr3 (214-278)||(41354142-41354206)
chr3 (147-254)||(4590903-4591012)
chr3 (147-254)||(4644354-4644463)
chr3 (147-204)||(2785865-2785922)
[»] chr2 (22 HSPs)
chr2 (142-279)||(21331994-21332131)
chr2 (142-279)||(21341882-21342019)
chr2 (142-279)||(12950881-12951018)
chr2 (142-279)||(29485012-29485149)
chr2 (142-279)||(36782184-36782321)
chr2 (142-279)||(45012068-45012205)
chr2 (142-279)||(15852635-15852772)
chr2 (142-279)||(34834812-34834949)
chr2 (142-279)||(34841256-34841393)
chr2 (142-279)||(42931372-42931509)
chr2 (142-279)||(43267944-43268081)
chr2 (142-279)||(45700644-45700781)
chr2 (142-279)||(2157697-2157834)
chr2 (142-279)||(2164113-2164250)
chr2 (142-279)||(2021448-2021585)
chr2 (142-279)||(13901957-13902094)
chr2 (142-279)||(16856487-16856624)
chr2 (142-279)||(16817330-16817467)
chr2 (142-278)||(21067958-21068093)
chr2 (142-279)||(11909950-11910089)
chr2 (147-254)||(17784443-17784552)
chr2 (147-254)||(17789096-17789205)
[»] scaffold0343 (1 HSPs)
scaffold0343 (142-279)||(2730-2867)
[»] chr6 (25 HSPs)
chr6 (142-279)||(1428423-1428560)
chr6 (142-279)||(4020235-4020372)
chr6 (142-279)||(4026661-4026798)
chr6 (142-279)||(9864760-9864897)
chr6 (142-279)||(13671817-13671954)
chr6 (142-279)||(31547980-31548117)
chr6 (142-279)||(34648885-34649022)
chr6 (142-279)||(34655336-34655473)
chr6 (142-279)||(7069702-7069839)
chr6 (142-279)||(11058150-11058287)
chr6 (142-279)||(34711557-34711694)
chr6 (142-278)||(21262574-21262710)
chr6 (142-279)||(4738323-4738460)
chr6 (142-279)||(32328493-32328630)
chr6 (142-279)||(27670179-27670316)
chr6 (142-279)||(4186770-4186907)
chr6 (209-279)||(29906975-29907045)
chr6 (142-279)||(1167480-1167624)
chr6 (209-279)||(30117335-30117405)
chr6 (142-204)||(7062516-7062578)
chr6 (237-279)||(7062578-7062620)
chr6 (147-254)||(10081567-10081676)
chr6 (147-254)||(9846629-9846738)
chr6 (142-179)||(29907044-29907081)
chr6 (142-179)||(30117299-30117336)
[»] chr5 (22 HSPs)
chr5 (142-279)||(2957944-2958081)
chr5 (142-279)||(2966413-2966550)
chr5 (142-279)||(22360049-22360186)
chr5 (142-279)||(25894649-25894786)
chr5 (142-279)||(29980544-29980681)
chr5 (142-279)||(30041244-30041381)
chr5 (142-279)||(34357288-34357425)
chr5 (142-279)||(34359079-34359216)
chr5 (142-279)||(4973648-4973785)
chr5 (142-279)||(12505765-12505902)
chr5 (142-279)||(22313915-22314052)
chr5 (142-279)||(2438886-2439022)
chr5 (142-279)||(5876303-5876440)
chr5 (142-279)||(40958617-40958754)
chr5 (144-278)||(42150905-42151039)
chr5 (142-278)||(29414669-29414805)
chr5 (147-254)||(9843457-9843566)
chr5 (151-253)||(19853484-19853588)
chr5 (147-254)||(2156125-2156234)
chr5 (147-254)||(12918955-12919064)
chr5 (147-254)||(30580195-30580304)
chr5 (147-254)||(33794200-33794309)
[»] scaffold0043 (1 HSPs)
scaffold0043 (142-279)||(5005-5142)
[»] scaffold0513 (1 HSPs)
scaffold0513 (142-278)||(12019-12155)
[»] scaffold0936 (1 HSPs)
scaffold0936 (142-279)||(3264-3401)
[»] scaffold0060 (1 HSPs)
scaffold0060 (142-279)||(15256-15393)
[»] scaffold0510 (2 HSPs)
scaffold0510 (142-278)||(8881-9017)
scaffold0510 (142-278)||(2560-2696)
[»] scaffold0053 (1 HSPs)
scaffold0053 (142-279)||(49775-49912)
[»] scaffold0173 (1 HSPs)
scaffold0173 (165-254)||(24268-24359)


Alignment Details
Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 44241579 - 44241442
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44241579 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgatc 44241480  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    || |||||||||| ||||||||||||||||||||||||    
T  44241479 aatgaactctaatcctaacaagtttcacgccttattaa 44241442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 1174828 - 1174692
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  1174828 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgctc 1174729  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  1174728 aaggaactctaatcctaacaagtttcacgccctatta 1174692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 140 - 278
Target Start/End: Complemental strand, 4599753 - 4599615
Alignment:
Q  140 agtattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttga 239  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  4599753 agtattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttaa 4599654  T
Q  240 tcaaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||||| ||||||||||| ||||| |||||    
T  4599653 tcaaggaactctaatcctaacaagttttacgccctatta 4599615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 39053338 - 39053475
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  39053338 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 39053437  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  39053438 aaggaactctaatcctaacaagtttcacgccctattaa 39053475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 39059710 - 39059847
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  39059710 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 39059809  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  39059810 aaggaactctaatcctaacaagtttcacgccctattaa 39059847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 6238877 - 6238740
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  6238877 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 6238778  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  6238777 aaggaactctaatcctaacaagttttacgccctattaa 6238740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 9869327 - 9869190
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||| | |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9869327 tattgtttggacacgaaagatgttgtcgagggatacatgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgatc 9869228  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  9869227 aaggaactctaatcctaacaagtttcacaccttattaa 9869190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 11913262 - 11913399
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||| ||    
T  11913262 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttacatgtgatgcttggtc 11913361  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11913362 aaggaactctaatcctaacaagtttcacgccttattaa 11913399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 42092118 - 42091981
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  42092118 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 42092019  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  42092018 aaggaactctaatcctaacaagttttacgccctattaa 42091981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 45016003 - 45015866
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  45016003 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 45015904  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  45015903 aaggaactctaatcctaacaagttttacgccctattaa 45015866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 26621692 - 26621556
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  26621692 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttaatc 26621593  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||| ||||| ||||||||||| ||||| |||||    
T  26621592 aaggaaccctaatcctaacaagttttacgccctatta 26621556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 31072540 - 31072403
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||     
T  31072540 tattgtttggacacgaatggtgttgtcgagggatacatgataatatcaaagaaaagctagagtccatgtatggtcattaggttacgtgtgacgcttgatt 31072441  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  31072440 aaggaactctaatcctaacaagtttcatgccttattaa 31072403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 29001953 - 29001816
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |    
T  29001953 tattatttggacatgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgctcgacc 29001854  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  29001853 aaggaactctaatcctaacaagttttacgccttattaa 29001816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 44916560 - 44916423
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| |     
T  44916560 tattgtttggacacgaatggtgttgtcgagggatacatgataatatcaaagaaaagctagaatccatgtatggtcattaggttacgtgtgacgtttggtt 44916461  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  44916460 aaggaattctaatcctaacaagtttcacgccttattaa 44916423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 32797945 - 32797821
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||     
T  32797945 tattgtttggacacgaattgtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttacgtgtgacgcttgatt 32797846  T
Q  242 aaggaactctaatactaacaagttt 266  Q
    ||||||||||||| |||||||||||    
T  32797845 aaggaactctaatcctaacaagttt 32797821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 41297739 - 41297603
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||||    
T  41297739 tattgtttggacacgaatggtgttgtcgagggatatgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgaggatcgatc 41297640  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| ||||||||||| ||||| |||||    
T  41297639 aaggaactctaatcctaacaagttttacgccctatta 41297603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 41305514 - 41305650
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| |||    
T  41305514 tattgtttggacatgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgtgacgcttaatc 41305613  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| ||||||||||| ||||| |||||    
T  41305614 aaggaactctaatcctaacaagttttacgccctatta 41305650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 27240161 - 27240267
Alignment:
Q  173 gatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatcaaggaactctaatactaacaagtttcacgcc 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  27240161 gatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatcaaggaactctaatcctaacaagtttcacgcc 27240260  T
Q  273 ttattaa 279  Q
    |||||||    
T  27240261 ttattaa 27240267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 43686851 - 43686721
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  || |||||| ||||    
T  43686851 tattgtttggacacgaatggtgttgtcgagggatacatgataatatcaaagaaaagctagaatccatgtatgatcattaggttaaatgagacgctcgatc 43686752  T
Q  242 aaggaactctaatactaacaagtttcacgcc 272  Q
    ||||||||||||| ||||||||||| |||||    
T  43686751 aaggaactctaatcctaacaagttttacgcc 43686721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 41299188 - 41299324
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||| |||  |||||||||| |||    
T  41299188 tattgtttggaaaagaatggtgttgtcgagggatacatgataatatcaaagaaaagcttgaatccatgaatggtcattaggttatatgtgacgcttaatc 41299287  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| ||||||||||| ||||| |||||    
T  41299288 aaggaactctaatcctaacaagttttacgccctatta 41299324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 1115982 - 1116121
Alignment:
Q  142 tattgtttggacacgaatggt---gttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttg 238  Q
    |||||||||||||| ||||||   ||||| ||||||||| ||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||    
T  1115982 tattgtttggacacaaatggtagtgttgtcgagggatacatgataatatcaaagaaaaggtagaatccatgtatagtcattaggttacgtgtgacgcttg 1116081  T
Q  239 atcaaggaactctaatactaacaagtttcacgccttatta 278  Q
    || |||||||||||||  ||| ||||||||| ||||||||    
T  1116082 attaaggaactctaatcataagaagtttcacaccttatta 1116121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 23762336 - 23762415
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattag 221  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  23762336 tattgtttggacacgaatagtgttgtcgagggatacatgataatatcaaagaaaagctagaatccatgtatggtcattag 23762415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 5445028 - 5445101
Alignment:
Q  206 catgtatgatcattagattacgtgtgacgcttgatcaaggaactctaatactaacaagtttcacgccttattaa 279  Q
    |||||||| ||||||| ||| |||||| ||||||||||||||||||||| |||||||||||||| |||||||||    
T  5445028 catgtatggtcattaggttatgtgtgaggcttgatcaaggaactctaatcctaacaagtttcacaccttattaa 5445101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 47646883 - 47646755
Alignment:
Q  151 gacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatcc--atgtatgatcattagattacgtgtgacgcttgatcaaggaac 248  Q
    |||| ||||| |||||| |||||||||||||||||||| |  ||||||||||||||  || | |||||||||| |||  |||||  |||| |||| ||||    
T  47646883 gacatgaatgatgttgtcgagggatacgtgataatatcgattaaaagctagaatccgtatatgtgatcattaggttatatgtgattcttggtcaacgaac 47646784  T
Q  249 tctaatactaacaagtttcacgccttatt 277  Q
    ||||||  |||||||||| ||||||||||    
T  47646783 tctaatcataacaagttttacgccttatt 47646755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 254
Target Start/End: Complemental strand, 23251568 - 23251460
Alignment:
Q  148 ttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtat--gatcattagattacgtgtgacgcttgatcaagg 245  Q
    ||||||||||||  | |||||||| ||||||||||||||||    ||| |||||||||||| |||  ||| ||||| ||| || |||||||| |||||||    
T  23251568 ttggacacgaataatcttgttgagcgatacgtgataatatcggtaaaacgctagaatccatatatgcgattattaggttatgtttgacgcttaatcaagg 23251469  T
Q  246 aactctaat 254  Q
    |||||||||    
T  23251468 aactctaat 23251460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 23764521 - 23764569
Alignment:
Q  231 gacgcttgatcaaggaactctaatactaacaagtttcacgccttattaa 279  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  23764521 gacgcttgatcaaggaactctaatcctaacaagttttacgccctattaa 23764569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 5357752 - 5357861
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||||||| |||||||||||||||     ||| |||||||||||| ||  |||| ||||| ||| || |||||||| ||||||    
T  5357752 tttggacacgaataatcttgttgagcgatacgtgataatattgggaaaatgctagaatccatatatgtgattattaggttatgtttgacgcttaatcaag 5357851  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  5357852 gaactctaat 5357861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 28413678 - 28413787
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||||||| |||||||||||||||     ||| |||||||||||| ||  |||| ||||| ||| || |||||||| ||||||    
T  28413678 tttggacacgaataatcttgttgagcgatacgtgataatattggtaaaatgctagaatccatatatgtgattattaggttatgtttgacgcttaatcaag 28413777  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  28413778 gaactctaat 28413787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 39806274 - 39806165
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||||||| ||||||||||||||||    ||| ||| |||||||| ||  |||| ||||| ||| || |||||||| ||||||    
T  39806274 tttggacacgaataatcttgttgagcgatacgtgataatatcggtaaaacgctggaatccatatatgtgattattaggttatgtttgacgcttaatcaag 39806175  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  39806174 gaactctaat 39806165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 45620149 - 45620258
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||| ||| ||||||||||||||||    ||| |||||||||||| ||  |||| ||||| ||| || ||| |||| ||||||    
T  45620149 tttggacacgaataatcttgtcgagcgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattaggttatgtttgaagcttaatcaag 45620248  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  45620249 gaactctaat 45620258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 38672788 - 38672880
Alignment:
Q  164 ttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaaggaactctaat 254  Q
    |||||||| ||||||||||||||||    ||| |||||||||||| ||  |||| || || ||| || |||||||| ||||||||||||||||    
T  38672788 ttgttgagcgatacgtgataatatcggtaaaacgctagaatccatatatgtgattatcaggttatgtttgacgcttaatcaaggaactctaat 38672880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 9316181 - 9316137
Alignment:
Q  146 gtttggacacgaatggtgttgttgagggatacgtgataatatcaa 190  Q
    ||||||||||||||| ||||||||||  ||| |||||||||||||    
T  9316181 gtttggacacgaatgatgttgttgagcaatatgtgataatatcaa 9316137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 11358193 - 11358330
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11358193 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgatc 11358292  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  11358293 aaggaactctaatcctaacaagtttcacgccctattaa 11358330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 36425730 - 36425867
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  36425730 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 36425829  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  36425830 aaggaactctaatcctaacaagtttcacgccctattaa 36425867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 7311571 - 7311434
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  7311571 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 7311472  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  7311471 aaggaactctaatcctaacaagttttacgccctattaa 7311434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 8013320 - 8013457
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  8013320 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 8013419  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  8013420 aaggaactctaatcctaacaagttttacgccctattaa 8013457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 36005482 - 36005619
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  36005482 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 36005581  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  36005582 aaggaactctaatcctaacaagttttacgccctattaa 36005619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 36021799 - 36021936
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  36021799 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 36021898  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  36021899 aaggaactctaatcctaacaagttttacgccctattaa 36021936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 36076189 - 36076052
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  36076189 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 36076090  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  36076089 aaggaactctaatcctaacaagttttacgccctattaa 36076052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 41242116 - 41242253
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  41242116 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 41242215  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  41242216 aaggaactctaatcctaacaagttttacgccctattaa 41242253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 6464576 - 6464713
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  6464576 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 6464675  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||| ||||| ||||| ||||||    
T  6464676 aaggaactctaatcctaacgagttttacgccctattaa 6464713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 142 - 266
Target Start/End: Original strand, 16710668 - 16710792
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  16710668 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaattcatgtatgatcattaggttacgtgtgacgctcgatc 16710767  T
Q  242 aaggaactctaatactaacaagttt 266  Q
    ||||||||||||| |||||||||||    
T  16710768 aaggaactctaatcctaacaagttt 16710792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 12768966 - 12768829
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||    
T  12768966 tattgtttggacacgaatggtcttgtcgagggatacatgataatatcaaagaaaatctagaatccatgtataatcattaggttacgtgtgaagcttgatc 12768867  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    || |||||||||| ||||||||||||||||||||||||    
T  12768866 aaagaactctaatcctaacaagtttcacgccttattaa 12768829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 26250591 - 26250728
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| || ||||||||| | ||||||||||||||||||||||||     
T  26250591 tattgtttggacacgaatgatattgtcgagggatacgtgataatatcaaagaaaagctataaaccatgtatggttattagattacgtgtgacgcttgatt 26250690  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  26250691 aaggaactctaatcctaacaaatttcacgccttattaa 26250728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 15012610 - 15012474
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  ||||||| || |||||||||||||||     
T  15012610 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagatagaatccatgtatagtcattaggttccgtgtgacgcttgatt 15012511  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| |||||||||||||| || |||||    
T  15012510 aaggaactctaatcctaacaagtttcacaccctatta 15012474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 1238436 - 1238307
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || |||  ||||||||||||||    
T  1238436 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcatcaggttatttgtgacgcttgatc 1238337  T
Q  242 aaggaactctaatactaacaagtttcacgc 271  Q
    ||||||||||||| ||||||||||| ||||    
T  1238336 aaggaactctaatcctaacaagttttacgc 1238307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 31017608 - 31017470
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatg--tatgatcattagattacgtgtgacgcttga 239  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||  |||| ||||||| |||| ||||||||||||    
T  31017608 tattttttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaaattagaatccatgtatatggtcattaggttacatgtgacgcttga 31017509  T
Q  240 tcaaggaactctaatactaacaagtttcacgccttatta 278  Q
    | || |||||||||| ||||| |||||||||||||||||    
T  31017508 ttaaagaactctaatcctaactagtttcacgccttatta 31017470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 262
Target Start/End: Original strand, 45068416 - 45068536
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||| |||||||||||||||| | ||||| ||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||||||||||     
T  45068416 tattgttcggacacgaatggtgttatcgagggttacatgataatatcaaagaaaaactagaatccatgtatggtcattaggttacgtgcgacgcttgatt 45068515  T
Q  242 aaggaactctaatactaacaa 262  Q
    || |||||||||| |||||||    
T  45068516 aaagaactctaatcctaacaa 45068536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 7933931 - 7934040
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||||||| ||||||||||||||||    ||| |||||||||||| ||  |||| |||||||||  | ||| |||||||||||    
T  7933931 tttggacacgaataatcttgttgagcgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattagattatatttgatgcttgatcaag 7934030  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  7934031 gaactctaat 7934040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 37026270 - 37026133
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  37026270 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaaactagaatcaatgtatgatcattaggttacgtgtgacgcttgatc 37026171  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  37026170 aaggaactctaatcctaacaagtttcacgccttattaa 37026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 3924093 - 3924230
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  3924093 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgctcgatc 3924192  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  3924193 aaggaactctaatcctaacaagttttacgccctattaa 3924230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 6020864 - 6021001
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6020864 tattgtttggacacgaatagtgttgtcgagggatatgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgatc 6020963  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  6020964 aaggaactctaatcctaacaagtttcacgccctattaa 6021001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 8185392 - 8185529
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  8185392 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 8185491  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  8185492 aaggaactctaatcctaacaagtttcacgccctattaa 8185529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 8192952 - 8193089
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  8192952 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 8193051  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  8193052 aaggaactctaatcctaacaagtttcacgccctattaa 8193089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 39433129 - 39432992
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  39433129 tattgtttggacacgaatggcgttgtcgagggatacgtgataatatcaaagaaaagctagaattcatgtatgatcattaggttacgtgtgacgcttgatc 39433030  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  39433029 aaggaactctaatcctaacaagtttcacaccttattaa 39432992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 48353480 - 48353617
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  48353480 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 48353579  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  48353580 aaggaactctaatcctaacaagtttcacgccctattaa 48353617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 142 - 272
Target Start/End: Original strand, 9642916 - 9643046
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  9642916 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgctcgatc 9643015  T
Q  242 aaggaactctaatactaacaagtttcacgcc 272  Q
    ||||||||||||| ||||||||||| |||||    
T  9643016 aaggaactctaatcctaacaagttttacgcc 9643046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 2446868 - 2446731
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  2446868 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 2446769  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  2446768 aaggaactctaatcctaacaagttttacgccctattaa 2446731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 5049912 - 5050049
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  5049912 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 5050011  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  5050012 aaggaactctaatcctaacaagttttacgccctattaa 5050049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 5056307 - 5056444
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  5056307 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 5056406  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  5056407 aaggaactctaatcctaacaagttttacgccctattaa 5056444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 6795660 - 6795523
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  6795660 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 6795561  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  6795560 aaggaactctaatcctaacaagttttacgccctattaa 6795523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 48347096 - 48347233
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  48347096 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 48347195  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||| ||| ||||||    
T  48347196 aaggaactctaatcctaacaagtttcatgccctattaa 48347233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 23612611 - 23612474
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  23612611 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgtgacgcttgatc 23612512  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  23612511 aaggaactctaatcctaacaagttttacgccctattaa 23612474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 36875767 - 36875630
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  36875767 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatatatgatcattaggttacgtgtgacgctcgatc 36875668  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||| ||| ||||||||||| ||||| ||||||    
T  36875667 aaggaactccaatcctaacaagttttacgccctattaa 36875630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 1379169 - 1379032
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||| ||||    
T  1379169 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagacaagctagaatccatgtatgctcattaggttacgtgcgacgctcgatc 1379070  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  1379069 aaggaactctaatcctaacaagttttacgccctattaa 1379032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 8142446 - 8142583
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||| ||||    
T  8142446 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagacaagctagaatccatgtatgctcattaggttacgtgcgacgctcgatc 8142545  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  8142546 aaggaactctaatcctaacaagttttacgccctattaa 8142583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 14299122 - 14298985
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||| | ||||    
T  14299122 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagggtacgtgcgacgttcgatc 14299023  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  14299022 aaggaactctaatcctaacaagttttacgccctattaa 14298985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 26602134 - 26601997
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  26602134 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgttcattaggttatgtgtgacgcttgatc 26602035  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    |||||| |||||| ||||||||||| ||||| ||||||    
T  26602034 aaggaattctaatcctaacaagttttacgccctattaa 26601997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 19090030 - 19089894
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||    
T  19090030 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagttagaatccatgtatggtcattaggttatgtgtgacgcttgatc 19089931  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| ||||||||||| ||||| |||||    
T  19089930 aaggaactctaatcctaacaagttttacgccctatta 19089894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 42422255 - 42422112
Alignment:
Q  1 gagcatgtagctcttgtgctgctttgaaaatagtccaacatcgggagcttttaaacaatagagaggaagtttatatataaaacacaacgcttatcactcc 100  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||| |    
T  42422255 gagcatgtagctcttgtgctgttgtgaaaatattccaacatcgggagcttttaaacaatagagaggaagtttatatataaaatgcagcgcttatcacttc 42422156  T
Q  101 ttggtggtctacaaagtaaatgtcaatcttaaaagttatagtat 144  Q
    || |||| |||||||| ||||| |||||||||||||||||||||    
T  42422155 ttagtggcctacaaagcaaatggcaatcttaaaagttatagtat 42422112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 1948633 - 1948770
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||||||||||||| ||||||| ||| ||||||||||||||     
T  1948633 tattgtttggacacgaatagtgttgtcgagggatacgtgataatctcaaagaaaatctagaatccatgtatggtcattaggttatgtgtgacgcttgatt 1948732  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  1948733 aaggaactctaatcctaacaagtttcacgccctattaa 1948770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 14287937 - 14287800
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||| | ||||    
T  14287937 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagggtacgtgcgacgttcgatc 14287838  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| |||||||| || ||||| ||||||    
T  14287837 aaggaactctaatcctaacaagatttacgccctattaa 14287800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 15914860 - 15914723
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||    
T  15914860 tattgtttggacacgaatagtgttgtcgagggatatgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgcgacgcttgatc 15914761  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  15914760 aaggaactctaatcctaacaagttttacgccctattaa 15914723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 21642740 - 21642603
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||| || ||||||| ||| |||||| ||||||||    
T  21642740 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaatgaaaagctagaatccatgtttgttcattaggttatgtgtgatgcttgatc 21642641  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  21642640 aaggaactctaatcctaacaagtttcacgccctattaa 21642603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 275
Target Start/End: Original strand, 33850643 - 33850776
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||     
T  33850643 tattgtttggacacgaatggtgttgtcgagggatacatgataatatcaaagaaaagctagaatacatgtatagtcattaggttacgtgtgacgcttgatt 33850742  T
Q  242 aaggaactctaatactaacaagtttcacgcctta 275  Q
    ||||||||||||| ||||||||||| ||||||||    
T  33850743 aaggaactctaatcctaacaagtttaacgcctta 33850776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 145 - 278
Target Start/End: Complemental strand, 45433805 - 45433671
Alignment:
Q  145 tgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatcaag 244  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||| |||    
T  45433805 tgtttggacacgaatggtgttgtcgagggatacatgataatatcaaagaaaatctagaatccatgtatggtcattaggttacgtgtgacgcttgattaag 45433706  T
Q  245 gaactctaatactaacaag-tttcacgccttatta 278  Q
    |||||||||| |||||||| ||| |||||||||||    
T  45433705 gaactctaatcctaacaagtttttacgccttatta 45433671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 15949381 - 15949244
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||  || |||||||||||    
T  15949381 tattgtttggacacgaatagtgttgtcgagggatatgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatatgcgacgcttgatc 15949282  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  15949281 aaggaactctaatcctaacaagttttacgccctattaa 15949244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 13774130 - 13774204
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatc 216  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13774130 tattgtttggacacgaatgatgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatc 13774204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 21901193 - 21901308
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||||||| ||||||||||||||||    ||| |||||||||||| ||  |||| ||||||||| || |||||||| ||||||    
T  21901193 tttggacacgaataatcttgttgagcgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattagattatgtttgacgcttaatcaag 21901292  T
Q  245 gaactctaatactaac 260  Q
    ||||||| || |||||    
T  21901293 gaactctgattctaac 21901308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 27954303 - 27954243
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccat 208  Q
    |||||||||||||| ||||||||||| ||| |||||||||||  || |||||||||||||||    
T  27954303 tttggacacgaatgatgttgttgaggaatatgtgataatatc-gagtaaagctagaatccat 27954243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 28442671 - 28442628
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaa 190  Q
    |||||||||||||| |||||||||| |||| |||||||||||||    
T  28442671 tttggacacgaatgatgttgttgagcgatatgtgataatatcaa 28442628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 10831130 - 10831239
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatg--atcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||| ||||  | |||||||| ||||||||||||||||    |||  ||||||||||| ||||  || ||||| ||| || |||||||| ||||||    
T  10831130 tttggacatgaataatcttgttgagcgatacgtgataatatcggtaaaactctagaatccatatatgtgattattaggttatgtttgacgcttaatcaag 10831229  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  10831230 gaactctaat 10831239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 11024922 - 11025031
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatg--atcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||| ||||  | |||||||| ||||||||||||||||    |||  ||||||||||| ||||  || ||||| ||| || |||||||| ||||||    
T  11024922 tttggacatgaataatcttgttgagcgatacgtgataatatcggtaaaactctagaatccatatatgtgattattaggttatgtttgacgcttaatcaag 11025021  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  11025022 gaactctaat 11025031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 55462772 - 55462909
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  55462772 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgatc 55462871  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  55462872 aaggaactctaatcctaacaagtttcacgccctattaa 55462909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 143 - 279
Target Start/End: Original strand, 37368315 - 37368451
Alignment:
Q  143 attgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatca 242  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37368315 attgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgatca 37368414  T
Q  243 aggaactctaatactaacaagtttcacgccttattaa 279  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  37368415 aggaactctaatcctaacaagtttcacgccctattaa 37368451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 8104104 - 8103967
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  8104104 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtgtgatcattaggttacgtgtgacgcttgatc 8104005  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  8104004 aaggaactctaatcctaacaagtttcacgccctattaa 8103967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 16838359 - 16838496
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||    
T  16838359 tattgtttggacacgaatggtgttgtcgagggatacatgataatatcaaagaaaagatagaatccatgtatggtcattaggttacgtgtgacgcttgatc 16838458  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  16838459 aaggaactctaatcctaacaagtttcacgccttattaa 16838496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 27590527 - 27590390
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  27590527 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 27590428  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  27590427 aaggaactctaatcctaacaagtttcacgccctattaa 27590390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 13594330 - 13594200
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  13594330 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgctcgatc 13594231  T
Q  242 aaggaactctaatactaacaagtttcacgcc 272  Q
    ||||||||||||| ||||||||||| |||||    
T  13594230 aaggaactctaatcctaacaagttttacgcc 13594200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 17457077 - 17456940
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  17457077 tattgtttggacatgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 17456978  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  17456977 aaggaactctaatcctaacaagtttcacgccctattaa 17456940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 7780629 - 7780493
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  7780629 tattgtttggacacgaatgatgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttaatc 7780530  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| ||||||||||| ||||| |||||    
T  7780529 aaggaactctaatcctaacaagttttacgccctatta 7780493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 41373209 - 41373072
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  41373209 tattgtttggacacgaatgatgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 41373110  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  41373109 aaggaactctaatcctaacaagttttacgccctattaa 41373072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 16405568 - 16405427
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatat----caaagaaaagctagaatccatgtatgatcattagattacgtgtgacgctt 237  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16405568 tattgtttggacacgaatggtgttgtcgagggatacattataatatatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgctt 16405469  T
Q  238 gatcaaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  16405468 gatcaaggaactctaatcctaacaagttttacgccttattaa 16405427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 30211536 - 30211673
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||  ||| ||||||||||||||     
T  30211536 tattttttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaatctagaatccatgtatggtcattaagttatgtgtgacgcttgatt 30211635  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    |||||||||||||  |||||||||||| ||||||||||    
T  30211636 aaggaactctaatcataacaagtttcatgccttattaa 30211673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 30238482 - 30238345
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||  |||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||||||||    
T  30238482 tattgtttggacacgaatagtgttgtcgagggataaatgataatatcaaagaaaagctagaatacatgtatggtcattaggttatgtgtgacgcttgatc 30238383  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  30238382 aaggaactctaatcctaacaagttttacgccctattaa 30238345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 36754791 - 36754928
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | | ||||||||||||||     
T  36754791 tattgtttggacacgaatggtgttgtcgagggatacatgataatatcaaagaaaagctagaatccatgtatggtcattaggtaatgtgtgacgcttgatt 36754890  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||  ||| |||| |||||||||||||||||||    
T  36754891 aaggaacttcaatcctaataagtttcacgccttattaa 36754928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 5660549 - 5660686
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||| |||||||||||||| | |||| |||||||||||||| |||||||||||||| |||||||| | |||||||||||| |||| ||||| ||||||||    
T  5660549 tattatttggacacgaatgatattgtcgagggatacgtgattatatcaaagaaaagttagaatccgtatatgatcattaggttacatgtgatgcttgatc 5660648  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5660649 aaggaactctaatcctaacaagtttcacgccttattaa 5660686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 2948062 - 2947953
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||||||| ||||||||||||||||    ||| |||||||||||| ||  |||| |||||||||  | ||| |||||||||||    
T  2948062 tttggacacgaataatcttgttgagcgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattagattatatttgatgcttgatcaag 2947963  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  2947962 gaactctaat 2947953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 13003809 - 13003900
Alignment:
Q  165 tgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaaggaactctaat 254  Q
    ||||||| ||||||||||||||||    ||| |||||||||||| ||  |||| ||||| ||| || |||||||| ||||| ||||||||||    
T  13003809 tgttgagtgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattaggttatgtttgacgcttaatcaaagaactctaat 13003900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 24179296 - 24179159
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24179296 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgatc 24179197  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  24179196 aaggaactctaatcctaacaagtttcacgccctattaa 24179159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 6036488 - 6036351
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  6036488 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgagtgacgcttgatc 6036389  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  6036388 aaggaactctaatcctaacaagtttcacgccctattaa 6036351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 27501967 - 27502104
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  27501967 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 27502066  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  27502067 aaggaactctaatcctaacaagtttcacgccctattaa 27502104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 9570548 - 9570685
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  9570548 tattgtttggacacgaatggtattgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgctcgatc 9570647  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    |||||| |||||| ||||||||||| ||||| ||||||    
T  9570648 aaggaattctaatcctaacaagttttacgccctattaa 9570685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 9577050 - 9577187
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  9577050 tattgtttggacacgaatggtattgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgctcgatc 9577149  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    |||||| |||||| ||||||||||| ||||| ||||||    
T  9577150 aaggaattctaatcctaacaagttttacgccctattaa 9577187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 10941304 - 10941441
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||     
T  10941304 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagttagaatccatatatggtcattaggttacgtgtgacgcttgatt 10941403  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  10941404 aaggaactctaatcctaacaagtttcacgccttattaa 10941441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 32746592 - 32746455
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  32746592 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgtgacgcttgatc 32746493  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  32746492 aaggaactctaatcctaacaagttttacgccctattaa 32746455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 43995300 - 43995162
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaa-gaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgat 240  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |    
T  43995300 tattgtttggacacgaatggtgttgtcgagggatacgtaataatatcaaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttggt 43995201  T
Q  241 caaggaactctaatactaacaagtttcacgccttattaa 279  Q
     ||||||||||||| || |||||||||||||||||||||    
T  43995200 taaggaactctaatcctgacaagtttcacgccttattaa 43995162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 13015208 - 13015078
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  13015208 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgtgacgcttgatc 13015109  T
Q  242 aaggaactctaatactaacaagtttcacgcc 272  Q
    ||| ||||||||| ||||||||||| |||||    
T  13015108 aagaaactctaatcctaacaagttttacgcc 13015078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 25893458 - 25893316
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  25893458 tattgtttggacacgaatagtattgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaagttacgtgtgacgcttgatc 25893359  T
Q  242 aagg-----aactctaatactaacaagtttcacgccttattaa 279  Q
    ||||     ||||||||| ||||||||||||||||| ||||||    
T  25893358 aaggaatttaactctaatcctaacaagtttcacgccctattaa 25893316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 4311486 - 4311623
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||| ||||||    
T  4311486 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgcgacgattgatc 4311585  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  4311586 aaggaactctaatcctaacaagttttacgccctattaa 4311623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 23068686 - 23068562
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| || ||| ||||    
T  23068686 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaag-tagaatccatgtatgatcattaggttacgtgcgatgctcgatc 23068588  T
Q  242 aaggaactctaatactaacaagtttc 267  Q
    || |||||||||| ||||||||||||    
T  23068587 aaagaactctaatcctaacaagtttc 23068562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 152 - 279
Target Start/End: Original strand, 20651135 - 20651262
Alignment:
Q  152 acacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatcaaggaactct 251  Q
    ||||||||| | ||||  |||||||||||||||||||||||||||| |||||||| | ||||||||||| ||||||||||| ||||||||||||||||||    
T  20651135 acacgaatgatattgtcaagggatacgtgataatatcaaagaaaaggtagaatccgtatatgatcattaaattacgtgtgatgcttgatcaaggaactct 20651234  T
Q  252 aatactaacaagtttcacgccttattaa 279  Q
    ||| ||||| ||||||||||||||||||    
T  20651235 aatcctaacgagtttcacgccttattaa 20651262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 43931799 - 43931667
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgt--gtgacgcttga 239  Q
    ||||||||| |||||||||||||||| ||||||||||||||||       |||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  43931799 tattgtttgaacacgaatggtgttgtcgagggatacgtgataa-------gaaaagctagaatccatgtatggtcattaggttacgtatgtgacgcttga 43931707  T
Q  240 tcaaggaactctaatactaacaagtttcacgccttattaa 279  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  43931706 ttaaggaactctaatcctaacaagtttcacgccttattaa 43931667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 41354142 - 41354206
Alignment:
Q  214 atcattagattacgtgtgacgcttgatcaaggaactctaatactaacaagtttcacgccttatta 278  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  41354142 atcattaggttacgtgtgacgcttgctcaaggaactctaatcctaacaagtttcacgccctatta 41354206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 4591012 - 4590903
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||||||| ||||||||||||||||    ||| |||||||||||| ||  |||| |||||||||  | ||| |||||||||||    
T  4591012 tttggacacgaataatcttgttgagcgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattagattatatttgatgcttgatcaag 4590913  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  4590912 gaactctaat 4590903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 4644354 - 4644463
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    ||||||||||||| || |||||||  ||||||||||||||||    ||| |||||||||||| ||  |||| ||||  ||| || |||||||| | ||||    
T  4644354 tttggacacgaatagtcttgttgaacgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattatgttatgtttgacgcttaaccaag 4644453  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  4644454 gaactctaat 4644463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 2785922 - 2785865
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaat 204  Q
    ||||||||| |||| | |||| |||||||||||||||||||| |  ||||||||||||    
T  2785922 tttggacacaaatgattttgtcgagggatacgtgataatatcgattaaaagctagaat 2785865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 21331994 - 21332131
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21331994 tattgtttggacatgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgatc 21332093  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  21332094 aaggaactctaatcctaacaagtttcacgccctattaa 21332131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 21341882 - 21342019
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21341882 tattgtttggacatgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgatc 21341981  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  21341982 aaggaactctaatcctaacaagtttcacgccctattaa 21342019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 12951018 - 12950881
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  12951018 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 12950919  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  12950918 aaggaactctaatcctaacaagttttacgccttattaa 12950881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 29485149 - 29485012
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  29485149 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 29485050  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  29485049 aaggaactctaatcctaacaagtttcacgccctattaa 29485012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 36782184 - 36782321
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  36782184 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgctcgatc 36782283  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  36782284 aaggaactctaatcctaacaagttttacgccctattaa 36782321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 45012205 - 45012068
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  45012205 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 45012106  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  45012105 aaggaactctaatcctaacaagtttcacgccctattaa 45012068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 15852772 - 15852635
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  15852772 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtgtgatcattaggttaagtgtgacgcttgatc 15852673  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  15852672 aaggaactctaatcctaacaagtttcacgccctattaa 15852635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 34834812 - 34834949
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  34834812 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 34834911  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  34834912 aaggaactctaatcctaacaagttttacgccctattaa 34834949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 34841256 - 34841393
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  34841256 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 34841355  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  34841356 aaggaactctaatcctaacaagttttacgccctattaa 34841393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 42931372 - 42931509
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||    
T  42931372 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacatttgatc 42931471  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  42931472 aaggaactctaatcctaacaagtttcacgccctattaa 42931509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 43268081 - 43267944
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  43268081 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 43267982  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  43267981 aaggaactctaatcctaacaagttttacgccctattaa 43267944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 45700644 - 45700781
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||    
T  45700644 tattgtttggacacgaatgatgttgtcgagggatacgtgataatatcaaagaaaagctagaatccaggtatgatcattaggttatgtgtgacgtttgatc 45700743  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  45700744 aaggaactctaattctaacaagtttcacgccttattaa 45700781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 2157834 - 2157697
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||    
T  2157834 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagatagaatccatgtatgatcattaggttacgtgcgacgctcgatc 2157735  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  2157734 aaggaactctaatcctaacaagttttacgccctattaa 2157697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 2164250 - 2164113
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||||    
T  2164250 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtataatcattaggttacgtgcgacgctcgatc 2164151  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  2164150 aaggaactctaatcctaacaagttttacgccctattaa 2164113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 2021448 - 2021585
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  2021448 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgtgacgcttgatc 2021547  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| || || ||||||    
T  2021548 aaggaactctaatcctaacaagttttacaccctattaa 2021585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 13901957 - 13902094
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||| ||||    
T  13901957 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagacaagctagaatccatgtatgctcattaggttacgtgcgacgctcgatc 13902056  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  13902057 aaggaactctaatcctaacaagttttacgccctattaa 13902094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 16856487 - 16856624
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  16856487 tattgtttggacacgaatggtgttgtcgagggatatgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgtgacgcttgatc 16856586  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||| ||||||||| ||||||||| | ||||| ||||||    
T  16856587 aagaaactctaatcctaacaagtnttacgccctattaa 16856624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 16817330 - 16817467
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  16817330 tattgtttggacacgaatggtgttgtcgagggatatgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgtgacgcttgatc 16817429  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||| ||||||||| ||||||||| | ||||| ||||||    
T  16817430 aagaaactctaatcctaacaagtgttacgccctattaa 16817467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 21067958 - 21068093
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || || ||    
T  21067958 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttacgtgtgatgcctgctc 21068057  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| |||| ||||||||| || |||||    
T  21068058 aaggaactctaatcctaa-aagtttcacaccctatta 21068093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 11909950 - 11910089
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatga--tcattagattacgtgtgacgcttga 239  Q
    |||| |||||||||||||  | |||| ||  |||||||||||||||  |  |||||||||||||| | ||||   ||||| |||||  || || ||||||    
T  11909950 tattatttggacacgaataatattgtcgactgatacgtgataatatagattaaaagctagaatccgtatatgtggtcattggattatatgggatgcttga 11910049  T
Q  240 tcaaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  11910050 tcaaggaactctaatcctaacaagttttacgccttattaa 11910089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 17784443 - 17784552
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||| |||||| ||| ||||||||||||||||    ||| |||||||| ||| ||  |||| ||||| ||| || |||||||| ||||||    
T  17784443 tttggacacgaatgatgttgtcgagcgatacgtgataatatcggtaaaacgctagaattcatatatgtgattattaggttatgtttgacgcttaatcaag 17784542  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  17784543 gaactctaat 17784552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 17789096 - 17789205
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||| ||||| |||||| ||| ||||||||||||||||    ||| |||||||||||| ||  |||| ||||  ||| || |||||||| ||||||    
T  17789096 tttggacaggaatgatgttgtcgagcgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattatgttatgtttgacgcttaatcaag 17789195  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  17789196 gaactctaat 17789205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 2867 - 2730
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  2867 tattgtttggatacgaatggtgttgtcgagggatacatgataatatcaaagaaaagctataatccatgtatgatcattaggttacgtgtgacgcttgatc 2768  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2767 aaggaactctaatcctaacaagtttcacgccttattaa 2730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 7e-58; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 1428423 - 1428560
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  1428423 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 1428522  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  1428523 aaggaactctaatcctaacaagttttacgccttattaa 1428560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 4020235 - 4020372
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  4020235 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 4020334  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  4020335 aaggaactctaatcctaacaagtttcacgccctattaa 4020372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 4026661 - 4026798
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  4026661 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 4026760  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  4026761 aaggaactctaatcctaacaagtttcacgccctattaa 4026798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 9864760 - 9864897
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9864760 tattgtttggacacgaatagtattgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaagttacgtgtgacgcttgatc 9864859  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  9864860 aaggaactctaatcctaacaagtttcacgccctattaa 9864897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 13671817 - 13671954
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13671817 tattgtttggacactaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgcttgatc 13671916  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  13671917 aaggaactctaatcctaacaagtttcacgcattattaa 13671954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 31548117 - 31547980
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  31548117 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtgtgatcattaggttacgtgtgacgcttgatc 31548018  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  31548017 aaggaactctaatcctaacaagtttcacgccctattaa 31547980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 34649022 - 34648885
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  34649022 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 34648923  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  34648922 aaggaactctaatcctaacaagtttcacgccctattaa 34648885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 34655473 - 34655336
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  34655473 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 34655374  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  34655373 aaggaactctaatcctaacaagtttcacgccctattaa 34655336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 7069702 - 7069839
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  7069702 tattgtttggacacgaatagtgttgtcgagggatacatgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 7069801  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  7069802 aaggaactctaatcctaacaagtttcacgccctattaa 7069839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 11058150 - 11058287
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  11058150 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 11058249  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  11058250 aaggaactctaatcctaacaagttttacgccctattaa 11058287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 34711557 - 34711694
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  34711557 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 34711656  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  34711657 aaggaactctaatcctaacaagttttacgccctattaa 34711694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 21262574 - 21262710
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||    
T  21262574 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaaactagaatccatgtatgatcattaggttacgtgtgacgcttaatc 21262673  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| ||||||||||| ||||| |||||    
T  21262674 aaggaactctaatcctaacaagttttacgccctatta 21262710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 4738323 - 4738460
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  4738323 tattgtttggactcgaatagtgttgtcgagggatacatgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 4738422  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  4738423 aaggaactctaatcctaacaagtttcacgccctattaa 4738460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 32328493 - 32328630
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||| ||||    
T  32328493 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttatatgtgacgctcgatc 32328592  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  32328593 aaggaactctaatcctaacaagttttacgccctattaa 32328630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 27670316 - 27670179
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||    
T  27670316 tattgtttggacacgaatgatgttgtcgagggatacgtgataatatcaaagaaaagctagaattcatgtatgattattaggttacgtgtgacacttgatc 27670217  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| |||||||||||||| | |||||||    
T  27670216 aaggaactctaatcctaacaagtttcacactttattaa 27670179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 4186907 - 4186770
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||    
T  4186907 tattgtttggacacgaatggtgttgtcgagggatacatgataatatcaaagaaaagttagaatccatgtatgatcattaggttacgtgcgacgctcgatc 4186808  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||  ||||| ||||||    
T  4186807 aaggaactctaatcctaacaagttctacgccctattaa 4186770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 29907045 - 29906975
Alignment:
Q  209 gtatgatcattagattacgtgtgacgcttgatcaaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29907045 gtatggtcattaggttacgtgtgacgcttgatcaaggaactctaatcctaacaagtttcacgccttattaa 29906975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 1167480 - 1167624
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaaga-------aaagctagaatccatgtatgatcattagattacgtgtgacg 234  Q
    |||| |||||||||||| | | |||||||||||||| ||||||||| ||| |       ||| ||||||||| | ||||||||| || ||| ||||||||    
T  1167480 tattatttggacacgaacgatattgttgagggatacatgataatataaaaaataaaaaaaaaactagaatccgtatatgatcatcaggttatgtgtgacg 1167579  T
Q  235 cttgatcaaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||| ||| |||||| ||||||||||||||||||||||||    
T  1167580 cttgatcaaagaattctaatcctaacaagtttcacgccttattaa 1167624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 30117335 - 30117405
Alignment:
Q  209 gtatgatcattagattacgtgtgacgcttgatcaaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||| || |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30117335 gtatggtccttaggttacgtgtgacgcttgatcaaggaactctaatcctaacaagtttcacgccttattaa 30117405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 7062516 - 7062578
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaat 204  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  7062516 tattgtttggacacgaatagtgttgtcgagggatacatgataatatcaaagaaaagctagaat 7062578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 279
Target Start/End: Original strand, 7062578 - 7062620
Alignment:
Q  237 tgatcaaggaactctaatactaacaagtttcacgccttattaa 279  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  7062578 tgatcaaggaactctaatcctaacaagtttcacgccctattaa 7062620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 10081567 - 10081676
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatg--atcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||||||| |||| |||||||||||    ||| |||||||||||| ||||  || ||||| ||| || |||||||| ||||||    
T  10081567 tttggacacgaataatcttgttgagcgatatgtgataatatcggtaaaacgctagaatccatatatgtgattattaggttatgtttgacgcttaatcaag 10081666  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  10081667 gaactctaat 10081676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 9846738 - 9846629
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatcc--atgtatgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||| ||||||||| |||||| ||| |||||||||||||||| |  ||| ||||||||||  || | |||| || || ||| || |||||||| |||||     
T  9846738 tttgaacacgaatgatgttgtcgagcgatacgtgataatatcgataaaatgctagaatccgtatatgtgattatcaggttatgtttgacgcttaatcaac 9846639  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  9846638 gaactctaat 9846629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 29907081 - 29907044
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgt 179  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  29907081 tattgtttggacacgaatggtgttgtcgagggacacgt 29907044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 30117299 - 30117336
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgt 179  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  30117299 tattgtttggacacgaatggtgttgtcgagggacacgt 30117336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 7e-58; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 2958081 - 2957944
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  2958081 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 2957982  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  2957981 aaggaactctaatcctaacaagtttcacgccctattaa 2957944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 2966550 - 2966413
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  2966550 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgcttgatc 2966451  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  2966450 aaggaactctaatcctaacaagtttcacgccctattaa 2966413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 22360186 - 22360049
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  22360186 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttacgtgtgacgcttgatc 22360087  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  22360086 aaggaactctaatcctaacaagttttacgccctattaa 22360049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 25894649 - 25894786
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  25894649 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatcgatgtatgatcattaggttacgtgcgacgcttgatc 25894748  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  25894749 aaggaactctaatcctaacaagtttcacgccctattaa 25894786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 29980681 - 29980544
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  29980681 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 29980582  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  29980581 aaggaactctaatcctaacaagttttacgccctattaa 29980544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 30041244 - 30041381
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  30041244 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 30041343  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  30041344 aaggaactctaatcctaacaagttttacgccctattaa 30041381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 34357288 - 34357425
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  34357288 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 34357387  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  34357388 aaggaactctaatcctaacaagttttacgccctattaa 34357425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 34359079 - 34359216
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  34359079 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 34359178  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  34359179 aaggaactctaatcctaacaagttttacgccctattaa 34359216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 4973785 - 4973648
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  4973785 tattgtttggacacgaatgatgttgtcgagggatatgtgataatatcaaagaaaagctagaatccatgtatgatcattatgttacgtgtgacgcttgatc 4973686  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    |||||||||| || |||||||||||||| |||||||||    
T  4973685 aaggaactctgatcctaacaagtttcaccccttattaa 4973648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 12505765 - 12505902
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| ||| |||||||    
T  12505765 tattgtttggacacgaatgatgttgtcgagggatacgtgataatatcaaagagaagctagaatccatgtataatcattaggttacgtgggactcttgatc 12505864  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12505865 aaggaactctaatcctaacaagtttcacgccttattaa 12505902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 22314052 - 22313915
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||    
T  22314052 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtacggtcattaggttacgtgtgacgcttgatc 22313953  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  22313952 aaggaactctaatcctaacaagttttacgccctattaa 22313915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 2439022 - 2438886
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||     
T  2439022 tattgtttggacacaaatgatgttgtcgagggatacatgataatatcaaagaaaagctagaatccatgcatg-tcattaggttacgtgtgacgcttgatt 2438924  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2438923 aaggaactctaatcctaacaagtttcacgccttattaa 2438886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 5876440 - 5876303
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||| |||||||||||    
T  5876440 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaatctagaatccatgtatggtcattaggttatgtgcgacgcttgatc 5876341  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  5876340 aaggaactctaatcctaacaagttttacgccctattaa 5876303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 40958617 - 40958754
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  40958617 tattgtttggacacgaatagtgttgtcgaggaatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgtgacgcttgatc 40958716  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||| | ||||| ||||||    
T  40958717 aaggaactctaatcctaacaagtgttacgccctattaa 40958754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 144 - 278
Target Start/End: Complemental strand, 42151039 - 42150905
Alignment:
Q  144 ttgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatcaa 243  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||||||||| ||    
T  42151039 ttgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaaactagaatccatgtatggtcattaggttatgtgtgacgcttgattaa 42150940  T
Q  244 ggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||| ||||||||||| ||||| |||||    
T  42150939 ggaactctaatcctaacaagttttacgccctatta 42150905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 29414669 - 29414805
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  29414669 tattgtttgaacatgaatgatgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtcattaggttatgtgtgacgcttgatc 29414768  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||| || |||||| |||| |||||| ||||| |||||    
T  29414769 aagaaattctaatcctaataagttttacgccctatta 29414805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 9843566 - 9843457
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||||||| ||||||||||||||||    ||| |||||||||||| ||  |||| |||||||||  | ||| |||||||||||    
T  9843566 tttggacacgaataatcttgttgagcgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattagattatatttgatgcttgatcaag 9843467  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  9843466 gaactctaat 9843457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 253
Target Start/End: Original strand, 19853484 - 19853588
Alignment:
Q  151 gacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaaggaac 248  Q
    |||| ||||| |||||||||| ||||||||||||||||    ||| |||||||||||| ||  |||| ||||||||| || |||||||| ||||| ||||    
T  19853484 gacatgaatgatgttgttgagtgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattagattatgtttgacgcttaatcaacgaac 19853583  T
Q  249 tctaa 253  Q
    |||||    
T  19853584 tctaa 19853588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 2156125 - 2156234
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||  | |||||||| ||||||||||||||||    |||  ||||||||||| ||  |||| ||||| ||| || |||||||| ||||||    
T  2156125 tttggacacgaataatcttgttgagcgatacgtgataatatcggtaaaacactagaatccatatatgtgattattaggttatgtttgacgcttaatcaag 2156224  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  2156225 gaactctaat 2156234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 12918955 - 12919064
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    ||||||||||||| || |||||||| ||||||||||||||||    ||| |||||||||||| ||  || | ||||| ||| || |||||||| | ||||    
T  12918955 tttggacacgaatagtcttgttgagcgatacgtgataatatcggtaaaacgctagaatccatatatgtggttattaggttatgtttgacgcttaaccaag 12919054  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  12919055 gaactctaat 12919064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Original strand, 30580195 - 30580304
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||||||||||| ||| || ||  |||||||||||||||| |  ||| |||||||||||| ||  |||| ||||| ||| || |||||||| |||||     
T  30580195 tttggacacgaatgatgtcgtcgaccgatacgtgataatatcgataaaacgctagaatccatatatgtgattattaggttatgtttgacgcttaatcaac 30580294  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  30580295 gaactctaat 30580304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 33794309 - 33794200
Alignment:
Q  147 tttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaag 244  Q
    |||||| ||||||  | |||||||| |||||||||||||||||   ||| |||||||||||| ||  |||| ||||| ||| || |||||||| |||||     
T  33794309 tttggatacgaataatcttgttgagcgatacgtgataatatcagtaaaacgctagaatccatatatgtgattattaggttatgtttgacgcttaatcaaa 33794210  T
Q  245 gaactctaat 254  Q
    ||||||||||    
T  33794209 gaactctaat 33794200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 5005 - 5142
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  5005 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgcgacgctcgatc 5104  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  5105 aaggaactctaatcctaacaagttttacgccctattaa 5142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 12155 - 12019
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  12155 tattgtttggacacgaatggtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatttatgatcattaggttacgtgtgacgctcgatc 12056  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| ||||||||||| ||||| |||||    
T  12055 aaggaactctaatcctaacaagttttacgccctatta 12019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0936 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 3264 - 3401
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||| ||||||||    
T  3264 tattgtttggacacgaatgatgttgtcgagggatacgtgataatatcaaagaaaagctagaatccatgtatggtaattaggttaagtgtgaagcttgatc 3363  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  3364 aaggaactctaatcctaacaagtttcacgccttattaa 3401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 15393 - 15256
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||      
T  15393 tattgtttggacacgaacggtgttgtcgagggatacatgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgacgctggaat 15294  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  15293 aaggaactctaatcctaacaagtttcacgccttattaa 15256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 8881 - 9017
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||||    
T  8881 tattgtttggacacgaatggtgttgtcgagggatatgtgataatatcaaagaaaagctagaatccatgtatgatcattaggttacgtgtgaggatcgatc 8980  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| ||||||||||| ||||| |||||    
T  8981 aaggaactctaatcctaacaagttttacgccctatta 9017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 2560 - 2696
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||| |||  |||||||||| |||    
T  2560 tattgtttggacatgaatggtgttgtcgagggatacatgataatatcaaagaaaagcttgaatccatgaatggtcattaggttatatgtgacgcttaatc 2659  T
Q  242 aaggaactctaatactaacaagtttcacgccttatta 278  Q
    ||||||||||||| ||||||||||| ||||| |||||    
T  2660 aaggaactctaatcctaacaagttttacgccctatta 2696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 142 - 279
Target Start/End: Complemental strand, 49912 - 49775
Alignment:
Q  142 tattgtttggacacgaatggtgttgttgagggatacgtgataatatcaaagaaaagctagaatccatgtatgatcattagattacgtgtgacgcttgatc 241  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||| ||| ||||||||||     
T  49912 tattgtttggacacgaatagtgttgtcgagggatacgtgataatatcaaagaaaagctagaatccgtgtatggtcattaggttatgtgcgacgcttgatg 49813  T
Q  242 aaggaactctaatactaacaagtttcacgccttattaa 279  Q
    ||||||||||||| ||||||||||| ||||| ||||||    
T  49812 aaggaactctaatcctaacaagttttacgccctattaa 49775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 24268 - 24359
Alignment:
Q  165 tgttgagggatacgtgataatatcaaagaaaagctagaatccatgta--tgatcattagattacgtgtgacgcttgatcaaggaactctaat 254  Q
    ||||||| ||||||||||||||||    ||| |||||||||||| ||  |||| ||||| ||| || |||||||| ||||| ||||||||||    
T  24268 tgttgagtgatacgtgataatatcggtaaaacgctagaatccatatatgtgattattaggttatgtttgacgcttaatcaaagaactctaat 24359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University