View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9913A_low_174 (Length: 277)
Name: NF9913A_low_174
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9913A_low_174 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 8 - 271
Target Start/End: Complemental strand, 21642683 - 21642420
Alignment:
| Q |
8 |
aaccatagaatgaaaacatctcccaaggtttacgtcattcaacgtagaacaagctttaataacggaagatagagtaaaagcattgggttgaataggaaat |
107 |
Q |
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| T |
21642683 |
aaccatagaatgaaagcatctcccaaggtttacgtcatttaacgcagaacaagctttgataacagaagatagagtaaaagcattgggttgaacaggaaat |
21642584 |
T |
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| Q |
108 |
gccaacatttcgtagaataaagatatcgactgatgtggctggccggagcgagtgtaaccggagataagtgaagtccatgagataacatctttgacgtgaa |
207 |
Q |
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||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
21642583 |
gccaacatttcgtagaataaagatatcgattgatgtggcaggtcggagcgagtgtaaccggagataagtgaagtccatgagatgacatctttgacgtgaa |
21642484 |
T |
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| Q |
208 |
gtgagtcgaagagatgacgggcgtgagataaatgggggccggggtttaatttaaagtaaagagt |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21642483 |
gtgagtcgaagagatgacgggcgtgagataaatgggggccggggtttaatttaaagtaaagagt |
21642420 |
T |
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