View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9913A_low_202 (Length: 260)
Name: NF9913A_low_202
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9913A_low_202 |
 | |
|
| [»] scaffold0274 (2 HSPs) |
| | |
|
| [»] scaffold0648 (1 HSPs) |
| | |
|
| [»] scaffold0640 (1 HSPs) |
| | |
|
| [»] scaffold0271 (1 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 28)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 19415776 - 19415536
Alignment:
| Q |
1 |
ggtaggttaaactaaccttaactaatagcagctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaa |
100 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19415776 |
ggtaggtttaactaaccttaactaactgcagctcagtttctgcgaaagctatttaactttacgaccaaagtaacatagagattgccggccactctatcaa |
19415677 |
T |
|
| Q |
101 |
taaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19415676 |
taaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaa |
19415577 |
T |
|
| Q |
201 |
tgaatctttcattgaatcataatcttcattctttgttgatg |
241 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19415576 |
tgaatctttcatagaatcataatcttcattctttgttgatg |
19415536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 17943544 - 17943315
Alignment:
| Q |
3 |
taggttaaactaaccttaactaatagcagctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaata |
102 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||| || |||||||||||||| |
|
|
| T |
17943544 |
taggtttaactaaccttaactaacagcagctcagtttctgcgaaagctatttaactttacgatcaaagtaacatagagtttgtcgcccactctatcaata |
17943445 |
T |
|
| Q |
103 |
aaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatg |
202 |
Q |
| |
|
||||| ||| |||||||||| ||||||||||||| ||| | |||||||||||||||||| |||||| |||||||||| || ||||| || || |||| || |
|
|
| T |
17943444 |
aaccgaaagcatgcatgcctccattttctaataaaaaacaaagaaccacaaatcccccaaaaacctgctgcaaatccaacccccatgccaaggtacagtg |
17943345 |
T |
|
| Q |
203 |
aatctttcattgaatcataatcttcattct |
232 |
Q |
| |
|
| ||||| || || |||| ||||||||||| |
|
|
| T |
17943344 |
attcttttatagagtcatcatcttcattct |
17943315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 32 - 232
Target Start/End: Complemental strand, 18117517 - 18117317
Alignment:
| Q |
32 |
ctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttct |
131 |
Q |
| |
|
||||||||| || || ||||||||||||||||| ||||||||||||||||| | | |||||||||||| ||||| ||||| |||||||| ||||| || |
|
|
| T |
18117517 |
ctcagtttcagcgaaagctatttaactttacgatcaaagtaacatagagatagtcacccactctatcaactaaccgaaagtacgcatgcctccatttcct |
18117418 |
T |
|
| Q |
132 |
aataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcattgaatcataatcttcattc |
231 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| | || || |||| |||||||||| |
|
|
| T |
18117417 |
aataagaaacatagaaccacaaatcccccagaaacctactgcaaatcccactcccatgcctagatacaatgactctcttatagattcatcatcttcattc |
18117318 |
T |
|
| Q |
232 |
t |
232 |
Q |
| |
|
| |
|
|
| T |
18117317 |
t |
18117317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 18148410 - 18148179
Alignment:
| Q |
1 |
ggtaggttaaactaaccttaactaatagcagctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaa |
100 |
Q |
| |
|
|||||||| ||||||||||||||| || ||||||| ||| || || ||||||||||||||||| || |||||||||||||| | | |||||||||||| |
|
|
| T |
18148410 |
ggtaggtttaactaaccttaactagcaggagctcagcttcggcgaaagctatttaactttacgatcacagtaacatagagatagtcacccactctatcaa |
18148311 |
T |
|
| Q |
101 |
taaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaa |
200 |
Q |
| |
|
||||| ||||| |||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
18148310 |
ctaaccgaaagtacgcatgcctccatttcctaataagaaacaaagaaccacaaatcccccagaaacctactgcaaatcccactcccatgcctaaatacaa |
18148211 |
T |
|
| Q |
201 |
tgaatctttcattgaatcataatcttcattct |
232 |
Q |
| |
|
|| ||| | || || |||| ||||||||||| |
|
|
| T |
18148210 |
cgactctcttatagattcatcatcttcattct |
18148179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 17725954 - 17726180
Alignment:
| Q |
11 |
actaaccttaactaatagcagctcagtttctgcaaag-gctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccgga |
109 |
Q |
| |
|
||||||||||||||| | | ||| |||||||||| ||||||||||||||| | |||||||||||||| ||| | | |||| ||||||||||| | |
|
|
| T |
17725954 |
actaaccttaactaacaagaactctatttctgcaaaaagctatttaactttacaattaaagtaacatagagcttgtcacctactccatcaataaaccaaa |
17726053 |
T |
|
| Q |
110 |
agtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
17726054 |
agtatgcatgcctccattttctaataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttt |
17726153 |
T |
|
| Q |
210 |
cattgaatcataatcttcattctttgt |
236 |
Q |
| |
|
|| || |||| ||||||||||||||| |
|
|
| T |
17726154 |
gatagagtcatcatcttcattctttgt |
17726180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 236
Target Start/End: Original strand, 19027183 - 19027409
Alignment:
| Q |
11 |
actaaccttaactaatagcagctcagtttctgcaaag-gctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccgga |
109 |
Q |
| |
|
||||||||||||||| | | ||| |||||||||| ||||||||||||||| | |||||||||||||| ||| | | |||| ||||||||||| | |
|
|
| T |
19027183 |
actaaccttaactaacaagaactctatttctgcaaaaagctatttaactttacaattaaagtaacatagagcttgtcacctactccatcaataaaccaaa |
19027282 |
T |
|
| Q |
110 |
agtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
19027283 |
agtatgcatgcctccattttctaataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttt |
19027382 |
T |
|
| Q |
210 |
cattgaatcataatcttcattctttgt |
236 |
Q |
| |
|
|| || |||| ||||||||||||||| |
|
|
| T |
19027383 |
gatagagtcatcatcttcattctttgt |
19027409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 19462772 - 19462541
Alignment:
| Q |
1 |
ggtaggttaaactaaccttaactaatagcagctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaa |
100 |
Q |
| |
|
|||||||| ||||||||||||||| || |||||||||||||| || |||||||||||||||| |||||||||||||||| | | |||||||||||| |
|
|
| T |
19462772 |
ggtaggtttaactaaccttaactagcaggagctcagtttctgcgaaagctatttaactttacggtcaaagtaacatagagaaagtcacccactctatcaa |
19462673 |
T |
|
| Q |
101 |
taaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaa |
200 |
Q |
| |
|
||||| ||||| |||||||| ||||| | ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
19462672 |
ctaaccgaaagtacgcatgcctccatttccgaataagaaacaaagaaccacaaatgccccagaaacctactgcaaatcccactcccatgcctaaatacaa |
19462573 |
T |
|
| Q |
201 |
tgaatctttcattgaatcataatcttcattct |
232 |
Q |
| |
|
|| ||| | || || |||| ||||||||||| |
|
|
| T |
19462572 |
cgactctcttatagattcatcatcttcattct |
19462541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 236
Target Start/End: Complemental strand, 18166717 - 18166513
Alignment:
| Q |
32 |
ctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttct |
131 |
Q |
| |
|
||||||||||| || |||||||||||||||| ||||||||||||||| ||| | | ||||||||||||||||| ||||||||||| || |||||||| |
|
|
| T |
18166717 |
ctcagtttctgagaaagctatttaactttacgttcaaagtaacatagagcttgtcaccaactctatcaataaaccgaaagtatgcatgtctccattttct |
18166618 |
T |
|
| Q |
132 |
aataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcattgaatcataatcttcattc |
231 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| | ||| | || || |||| |||||||||| |
|
|
| T |
18166617 |
aataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatgcctaggtacaaccattctcttatagagtcatcatcttcattc |
18166518 |
T |
|
| Q |
232 |
tttgt |
236 |
Q |
| |
|
||||| |
|
|
| T |
18166517 |
tttgt |
18166513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 52 - 241
Target Start/End: Complemental strand, 19426231 - 19426042
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
||||||||||||| |||||||||||||| || | ||||||||||| |||||| |||||||||||| | |||||||||||||| || | |||||||| |
|
|
| T |
19426231 |
tttaactttacgatcaaagtaacatagatcttatcacgcactctatcaacaaaccgaaagtatgcatgcttccattttctaataaggaacaaagaaccac |
19426132 |
T |
|
| Q |
152 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcattgaatcataatcttcattctttgttgatg |
241 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| || || |||| ||||||||||||||| |||| |
|
|
| T |
19426131 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattctttgatagagtcatcatcttcattctttgtagatg |
19426042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 18105079 - 18104889
Alignment:
| Q |
10 |
aactaaccttaactaatagcagctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccgga |
109 |
Q |
| |
|
||||||||||||||| || ||||||||||| || || ||||||||||||||||| ||||||||||||||||| | | ||||||||| || ||||| | |
|
|
| T |
18105079 |
aactaaccttaactagcaggagctcagtttcggcgaaagctatttaactttacgatcaaagtaacatagagatagtcacccactctattaactaaccgaa |
18104980 |
T |
|
| Q |
110 |
agtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaa |
200 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||| ||||||||||||||||||||||| |||| |||||| |
|
|
| T |
18104979 |
agtatgcatgcctccatttcctaataagaaacatagaaccgaaaatccccaagaatcctactgcaaatcccactcccatgcctaaatacaa |
18104889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 241
Target Start/End: Complemental strand, 19355256 - 19355067
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| | ||||||||||| |||||| |||||||||||||| ||||||||||| ||||| | ||||| | |
|
|
| T |
19355256 |
tttaactttacgatcaaagtaacatagatcttgtcacgcactctatcaacaaaccgaaagtatgcatgcctccattttctaattagaaacaaagaacggc |
19355157 |
T |
|
| Q |
152 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcattgaatcataatcttcattctttgttgatg |
241 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| || || || | ||||||||| ||||| |||| |
|
|
| T |
19355156 |
aaatcccccagaaacctactgcaaatccaactcccatgcctagatacaatgattctttgatagagtcgtcatcttcattttttgtagatg |
19355067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 241
Target Start/End: Original strand, 18872315 - 18872526
Alignment:
| Q |
30 |
agctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcatttt |
129 |
Q |
| |
|
|||||| | ||||| || |||||||||||||| | ||||||||||||||| ||| | | |||| || ||||||| |||||||||||||| ||||| |
|
|
| T |
18872315 |
agctcaatatctgcgaaagctatttaactttatcatcaaagtaacatagagcttgtcacctactccatatataaaccaaaagtatgcatgcctccatttc |
18872414 |
T |
|
| Q |
130 |
ctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcattgaatcataatcttcat |
229 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| || ||||||| ||| ||| | || ||| |||||||||||| |
|
|
| T |
18872415 |
ctaataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatgccaagatacattgattctcttatagaagcataatcttcat |
18872514 |
T |
|
| Q |
230 |
tctttgttgatg |
241 |
Q |
| |
|
||||||| |||| |
|
|
| T |
18872515 |
tctttgtagatg |
18872526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 52 - 203
Target Start/End: Complemental strand, 19377160 - 19377009
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||| | | ||||||| ||||||| | |||||||||||||| ||||| ||||||||||| | |||||| | |
|
|
| T |
19377160 |
tttaactttacgatcaaagtaacatagagtttgtcacctactctattaataaactgaaagtatgcatgcctccatttcctaataagaaacaaagaaccgc |
19377061 |
T |
|
| Q |
152 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatga |
203 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
19377060 |
aaatcccccagaaacctactgcaaatccaactcccatgcctagatacaatga |
19377009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 19382484 - 19382245
Alignment:
| Q |
2 |
gtaggttaaactaaccttaactaatagcagctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaat |
101 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| ||||||| || ||||||||||||||| |||| |||||||||| ||| | | |||| || || |
|
|
| T |
19382484 |
gtaggtttcactaaccttaactggcagcagctcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatagat |
19382385 |
T |
|
| Q |
102 |
aaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaat |
201 |
Q |
| |
|
|||||| |||||||||||||| ||||| ||||||||||| | |||||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||| |
|
|
| T |
19382384 |
aaaccgaaagtatgcatgcctccatttcctaataagaaataaagaaccacaaatcccccaaaaacctactccaaatccaactcccatgcctagatacaac |
19382285 |
T |
|
| Q |
202 |
gaatctttcattgaatcataatcttcattctttgttgatg |
241 |
Q |
| |
|
|| ||| | || || |||| ||||||||||| ||| |||| |
|
|
| T |
19382284 |
gactctattatagattcatcatcttcattctctgtagatg |
19382245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 19465943 - 19465704
Alignment:
| Q |
2 |
gtaggttaaactaaccttaactaatagcagctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaat |
101 |
Q |
| |
|
||||||| ||||||||||||| ||| |||||| ||||||| || ||||||||||||||| ||||||||||||||| ||| | | | || || || |
|
|
| T |
19465943 |
gtaggtttcactaaccttaactggtaggagctcaatttctgcgaaagctatttaactttaccgtcaaagtaacatagagcttgtcacctattccatatat |
19465844 |
T |
|
| Q |
102 |
aaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaat |
201 |
Q |
| |
|
|||||| |||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||| | | |||||||||| |
|
|
| T |
19465843 |
aaaccgaaagtatgcatgcctccatttcctaataagaaacaaagaaccacaaatcccccagaaacctgctgcaaatccaactcccgtccttagatacaat |
19465744 |
T |
|
| Q |
202 |
gaatctttcattgaatcataatcttcattctttgttgatg |
241 |
Q |
| |
|
|| ||||| || || |||| ||| ||||||| ||| |||| |
|
|
| T |
19465743 |
gattcttttatcgattcatcatcctcattctctgtagatg |
19465704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 19352885 - 19352744
Alignment:
| Q |
100 |
ataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagataca |
199 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| |
|
|
| T |
19352885 |
ataaaccgaaaatatgcatgcctccattttctaataagaaacaaagaaccacaaatcccccagaaacctgctgcaaatccaactcccatgcctagataca |
19352786 |
T |
|
| Q |
200 |
atgaatctttcattgaatcataatcttcattctttgttgatg |
241 |
Q |
| |
|
|||| ||||| || || |||| | ||||||||| |||||||| |
|
|
| T |
19352785 |
atgattcttttatggagtcatcaccttcattctctgttgatg |
19352744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 32 - 241
Target Start/End: Complemental strand, 19394710 - 19394501
Alignment:
| Q |
32 |
ctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttct |
131 |
Q |
| |
|
|||| ||||||| || ||||||||||||||| |||| |||||||||| ||| | | |||| || |||| ||| ||| |||||||||| ||||| || |
|
|
| T |
19394710 |
ctcaatttctgcgaaagctatttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcct |
19394611 |
T |
|
| Q |
132 |
aataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcattgaatcataatcttcattc |
231 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| || || || | |||||||||| |
|
|
| T |
19394610 |
aataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtcttcatcttcattc |
19394511 |
T |
|
| Q |
232 |
tttgttgatg |
241 |
Q |
| |
|
| ||| |||| |
|
|
| T |
19394510 |
tctgtagatg |
19394501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 25464594 - 25464437
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||| | ||||| || ||||||||| |||||||||||||| ||||| ||||||| ||| | |||||||| |
|
|
| T |
25464594 |
tttaactttacgatcaaagtaacatagagtttgtcactcactccattaataaaccgaaagtatgcatgcctccatttcctaataaaaaacaaagaaccac |
25464495 |
T |
|
| Q |
152 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||||| |
|
|
| T |
25464494 |
aaatcccccagaaacctattgcaaatccaactcccaagcctagatacaatgattcttt |
25464437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 203
Target Start/End: Complemental strand, 19335550 - 19335402
Alignment:
| Q |
55 |
aactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaa |
154 |
Q |
| |
|
|||||||||| |||||||||||||| ||| | ||||||||| || |||||| ||||| |||||||| ||||||||||||||||| | ||||||||||| |
|
|
| T |
19335550 |
aactttacgatcaaagtaacatagatcttgtcacccactctataaacaaaccgaaagtaagcatgcctccattttctaataagaaacaaagaaccacaaa |
19335451 |
T |
|
| Q |
155 |
tcccccagaaacctactgcaaatcccactcccattcctagatacaatga |
203 |
Q |
| |
|
|||||||||||||| |||||||||| |||| ||| |||||||||||||| |
|
|
| T |
19335450 |
tcccccagaaacctgctgcaaatccaactctcatccctagatacaatga |
19335402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 232
Target Start/End: Complemental strand, 19438491 - 19438307
Alignment:
| Q |
48 |
gctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaa |
147 |
Q |
| |
|
||||||||||||||| | |||||||||||| |||| | | |||| |||||| ||||| ||||| |||||||| ||||| ||||||||||| |||||| |
|
|
| T |
19438491 |
gctatttaactttactatcaaagtaacataaagatagtcacacactgtatcaactaaccgaaagtacgcatgcctccatttcctaataagaaacatagaa |
19438392 |
T |
|
| Q |
148 |
ccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcattgaatcataatcttcattct |
232 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||| || ||| | || || |||| ||||||||||| |
|
|
| T |
19438391 |
ccacaaatcccccaaaaacctactgcaaatccaactcccatgcctagatacaacgactctcttatagattcatcatcttcattct |
19438307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 209
Target Start/End: Complemental strand, 17951378 - 17951207
Alignment:
| Q |
38 |
ttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataag |
137 |
Q |
| |
|
||||||||| ||||||||||||||| |||||| |||||||| || |||||| || |||||||| |||||||||||||| ||||||| |||||| |
|
|
| T |
17951378 |
ttctgcaaaagctatttaactttaccttcaaagttacatagagcctgttacccactccatatataaaccgaaagtatgcatgcctccattttcgaataag |
17951279 |
T |
|
| Q |
138 |
aaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| ||||| |
|
|
| T |
17951278 |
aaacaaagaaccacaaatcccccagaaacctactgcaaatcccactcccataccaaggtacaatgattcttt |
17951207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 199
Target Start/End: Original strand, 14894799 - 14894996
Alignment:
| Q |
2 |
gtaggttaaactaaccttaactaatagcagctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaat |
101 |
Q |
| |
|
|||||||| |||||||||||||| | |||||| ||| | | || | | ||||||||| || ||||||||||||||| ||| | | |||| |||||| |
|
|
| T |
14894799 |
gtaggttacactaaccttaactagccggagctcaattttttccaaagttgtttaactttgggatcaaagtaacatagagcttgtcacctactccatcaat |
14894898 |
T |
|
| Q |
102 |
aaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagataca |
199 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||| | ||||||| |||||||||| ||||||||||||||||| | |||||| || ||||||| |
|
|
| T |
14894899 |
aaaccgaaagtatgcatgcctccattttctaataagaaacaaagaaccagaaatcccccaaaaacctactgcaaatccaattcccatgccaagataca |
14894996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 241
Target Start/End: Complemental strand, 18017515 - 18017374
Alignment:
| Q |
100 |
ataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagataca |
199 |
Q |
| |
|
|||||||| || ||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||| ||||||| || |||||||| |||||||||| |
|
|
| T |
18017515 |
ataaaccgaaaatatgcatgcctccattttctaatgagaaacaaagaaccacaaatcccccagaaacctgctgcaaagccaactcccatgcctagataca |
18017416 |
T |
|
| Q |
200 |
atgaatctttcattgaatcataatcttcattctttgttgatg |
241 |
Q |
| |
|
|||| ||||| || || |||| ||| ||||||| ||| |||| |
|
|
| T |
18017415 |
atgattcttttatagattcatcatcctcattctctgtagatg |
18017374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 48 - 232
Target Start/End: Complemental strand, 19401271 - 19401087
Alignment:
| Q |
48 |
gctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaa |
147 |
Q |
| |
|
||||||||||||||| | |||||| |||||||| || |||||| || || ||||| || ||||||||||| ||||||||||| ||||| | |||| |
|
|
| T |
19401271 |
gctatttaactttaccatcaaagttacatagagcctgttacccactccatatatgaaccgaaaatatgcatgcctccattttctaatgagaaacaaagaa |
19401172 |
T |
|
| Q |
148 |
ccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcattgaatcataatcttcattct |
232 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || || ||||| || ||||| || || || | ||||||||||| |
|
|
| T |
19401171 |
ccacaaatcccccagaaacctactgcaaatcccactcccatgccaaggtacaacgattcttttatagattcgtcatcttcattct |
19401087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 18110012 - 18109791
Alignment:
| Q |
11 |
actaaccttaactaatagcagctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaa |
110 |
Q |
| |
|
||||||||| |||| || |||||| ||| ||||| |||||| |||||||| | ||| || |||||||| || |||||| || ||||| || || |
|
|
| T |
18110012 |
actaacctttactagcagaagctcaacttcagcaaaagctattcaactttaccatcaatgttacatagagcctgttacccactccatatataaaacgaaa |
18109913 |
T |
|
| Q |
111 |
gtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttc |
210 |
Q |
| |
|
|||||||||||| ||||| || |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| ||||| |
|
|
| T |
18109912 |
gtatgcatgcctccatttcctgataacaaacaaagaaccacaaatcccccagaaacctactgcaaatcccactcccataccaaggtacaatgattctttt |
18109813 |
T |
|
| Q |
211 |
attgaatcataatcttcattct |
232 |
Q |
| |
|
|| || |||| ||| ||||||| |
|
|
| T |
18109812 |
atagattcatcatcctcattct |
18109791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 19456780 - 19456702
Alignment:
| Q |
109 |
aagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactccca |
187 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
19456780 |
aagtatgcatgcctccatttcctaataagaaacaaagaaccacaaatcccccagaaacctactgcaaatccaactccca |
19456702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 16678750 - 16678591
Alignment:
| Q |
50 |
tatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaacc |
149 |
Q |
| |
|
||||||||||||| | |||||| ||||| || ||| || |||||| ||||||||| | |||||| ||||| ||||| ||||||||||| | |||||| |
|
|
| T |
16678750 |
tatttaactttaccatcaaagttacatacagcttgtcgcccactccatcaataaattgatagtatgtgtgcctccatttcctaataagaaacaaagaacc |
16678651 |
T |
|
| Q |
150 |
acaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
|||||| |||||||||||||| ||||| || ||||||| || ||||||||||| ||||| |
|
|
| T |
16678650 |
acaaataccccagaaacctaccgcaaaaccaactcccaagcccagatacaatgattcttt |
16678591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 24493276 - 24493375
Alignment:
| Q |
89 |
ccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccat |
188 |
Q |
| |
|
|||||| ||| ||||||||| |||| || ||||| ||||| ||||||||||| | || |||||| ||| ||| ||||||||| |||| || |||||||| |
|
|
| T |
24493276 |
ccactccatcgataaaccggtagtacgcgtgcctccatttcctaataagaaataaaggaccacacatcaaccaaaaacctactccaaacccaactcccat |
24493375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 13665365 - 13665596
Alignment:
| Q |
10 |
aactaaccttaactaatagcagctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccgga |
109 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||| || ||||||||||||||| | |||||||| |||||||||| || |||||||||||| |||||| | |
|
|
| T |
13665365 |
aactaaccttaactaacagcagctcagttcctgcgaaagctatttaactttaccatcaaagtaatatagagattgtcgcccactctatcaaaaaaccgaa |
13665464 |
T |
|
| Q |
110 |
agtatgcatgcctgcattttctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
|| |||||||||| ||||||||||||||||| | ||||||||| ||||||||||||||| |||||||||| || ||||| || || | |||||| ||||| |
|
|
| T |
13665465 |
agcatgcatgcctccattttctaataagaaacaaagaaccacatatcccccagaaacctgctgcaaatccaacccccatgccaaggttcaatgattcttt |
13665564 |
T |
|
| Q |
210 |
cattgaatcataatcttcattctttgttgatg |
241 |
Q |
| |
|
|| || || | ||||||||||||||| |||| |
|
|
| T |
13665565 |
tatagagtcgtcatcttcattctttgtagatg |
13665596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 52 - 241
Target Start/End: Complemental strand, 15537074 - 15536885
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
||||||||||||| |||||||||||||| ||| | | ||| ||||| ||||||| |||||||||||||| ||||||||||||||||| | |||||||| |
|
|
| T |
15537074 |
tttaactttacgatcaaagtaacatagatcttgtcacctactttatcagtaaaccgaaagtatgcatgcctccattttctaataagaaacaaagaaccac |
15536975 |
T |
|
| Q |
152 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcattgaatcataatcttcattctttgttgatg |
241 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||| | || |||| ||||||||||| ||| |||| |
|
|
| T |
15536974 |
aaatcccccagaaacctaccgcaaatccaactcccatccctagatacaatgattctttgttagagtcatcatcttcattctctgtggatg |
15536885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 2709032 - 2709183
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
|||||||||| | |||||| |||||||| ||| | | |||| |||||||||||| |||||| | ||| ||||| ||||||||||| | || ||||| |
|
|
| T |
2709032 |
tttaactttatcatcaaagttacatagagcttgtcacctactccatcaataaaccgatagtatgtgttcctccatttcctaataagaaacaaaggaccac |
2709131 |
T |
|
| Q |
152 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatga |
203 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
2709132 |
aaatcccccaaaaacctactgcaaatccaactcccatgcctagatacaatga |
2709183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 22127 - 21970
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
||||||||||| | | ||||||||||||| ||| | ||||||||||||||||||| ||||||||||||| |||||| |||| ||||| | ||||||| |
|
|
| T |
22127 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccaa |
22028 |
T |
|
| Q |
152 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||| || ||||||||||| ||||| |
|
|
| T |
22027 |
aaatcccccagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttt |
21970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 2029 - 2186
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
||||||||||| | | ||||||||||||| ||| | ||||||||||||||||||| ||||||||||||| |||||| |||| ||||| | |||||| |
|
|
| T |
2029 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
2128 |
T |
|
| Q |
152 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
|||||||||||||||| ||||||||||| | ||||| || ||||||||||| ||||| |
|
|
| T |
2129 |
aaatcccccagaaaccaactgcaaatccaatccccatgccaagatacaatgactcttt |
2186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 2558 - 2716
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
||||||||||| | | ||||||||||||| ||| | ||||||||||||||||||| ||||||||||||| |||||| |||| ||||| | ||||||| |
|
|
| T |
2558 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccaa |
2657 |
T |
|
| Q |
152 |
aaat-cccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
|||| |||||||||||| ||||||||||| || ||||| || ||||||||||| ||||| |
|
|
| T |
2658 |
aaatacccccagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttt |
2716 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 232
Target Start/End: Complemental strand, 8461129 - 8460927
Alignment:
| Q |
30 |
agctcagtttctgcaaaggctatttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcatttt |
129 |
Q |
| |
|
|||||| ||||||| || ||| |||||||||| | |||| | ||||||| ||| | ||| || ||||||||| || ||||||||||||| ||||| |
|
|
| T |
8461129 |
agctcaatttctgcgaaatctaattaactttaccatcaaaattccatagagcttgtcacccattccatcaataaatcgatagtatgcatgcctccatttc |
8461030 |
T |
|
| Q |
130 |
ctaataagaaaaatagaaccacaaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatctttcattgaatcataatcttcat |
229 |
Q |
| |
|
||||||||||| | |||||||||||||||||| ||||| ||||||||||| |||||||| || ||||||||||| ||| | || || |||| |||||||| |
|
|
| T |
8461029 |
ctaataagaaacaaagaaccacaaatcccccaaaaacccactgcaaatccaactcccatgccaagatacaatgattctcttatagagtcatcatcttcat |
8460930 |
T |
|
| Q |
230 |
tct |
232 |
Q |
| |
|
||| |
|
|
| T |
8460929 |
tct |
8460927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 6944 - 6787
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
||||||||||| | | ||||||||||||| ||| | ||||||||||||||||||| ||||||||||||| |||||| |||| ||||| | |||||| |
|
|
| T |
6944 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
6845 |
T |
|
| Q |
152 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
|||||||||||||||| ||||||||||| | ||||| || ||||||||||| ||||| |
|
|
| T |
6844 |
aaatcccccagaaaccaactgcaaatccaatccccatgccaagatacaatgactcttt |
6787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0271 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 12042 - 11885
Alignment:
| Q |
52 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
151 |
Q |
| |
|
||||||||||| | | ||||||||||||| ||| | ||||||||||||||||||| ||||||||||||| |||||| |||| ||||| | |||||| |
|
|
| T |
12042 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
11943 |
T |
|
| Q |
152 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
209 |
Q |
| |
|
|||||||||||||||| ||||||||||| | ||||| || ||||||||||| ||||| |
|
|
| T |
11942 |
aaatcccccagaaaccaactgcaaatccaatccccatgccaagatacaatgactcttt |
11885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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