View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9913A_low_276 (Length: 245)

Name: NF9913A_low_276
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9913A_low_276
NF9913A_low_276
[»] chr3 (67 HSPs)
chr3 (19-237)||(40807883-40808101)
chr3 (19-236)||(44274305-44274522)
chr3 (19-237)||(10563596-10563813)
chr3 (19-188)||(11259318-11259487)
chr3 (19-194)||(40812720-40812895)
chr3 (10-184)||(49900608-49900782)
chr3 (19-188)||(17044853-17045022)
chr3 (21-188)||(22306579-22306746)
chr3 (19-188)||(17047013-17047182)
chr3 (19-184)||(17518873-17519038)
chr3 (19-184)||(17533735-17533900)
chr3 (19-188)||(17538993-17539162)
chr3 (19-180)||(10311415-10311575)
chr3 (19-188)||(17693954-17694123)
chr3 (26-237)||(19568155-19568366)
chr3 (21-188)||(41172367-41172534)
chr3 (19-169)||(50348041-50348191)
chr3 (64-237)||(33565018-33565192)
chr3 (19-188)||(35354489-35354658)
chr3 (19-188)||(15931504-15931672)
chr3 (64-237)||(35960875-35961049)
chr3 (44-188)||(14508758-14508903)
chr3 (62-237)||(42323918-42324094)
chr3 (143-237)||(5200190-5200284)
chr3 (38-191)||(9510909-9511062)
chr3 (38-191)||(9518884-9519037)
chr3 (67-159)||(35064566-35064658)
chr3 (154-237)||(6156732-6156815)
chr3 (132-234)||(5215647-5215749)
chr3 (136-237)||(14520450-14520551)
chr3 (80-184)||(16050875-16050979)
chr3 (83-222)||(22758796-22758935)
chr3 (62-184)||(11563654-11563777)
chr3 (121-188)||(17541423-17541490)
chr3 (62-185)||(49968858-49968981)
chr3 (72-194)||(13185834-13185957)
chr3 (154-232)||(2841458-2841536)
chr3 (19-83)||(35064681-35064745)
chr3 (19-77)||(5200277-5200335)
chr3 (132-184)||(15446868-15446920)
chr3 (132-180)||(15566744-15566792)
chr3 (80-184)||(24177736-24177840)
chr3 (83-222)||(43888717-43888856)
chr3 (83-181)||(11885560-11885658)
chr3 (62-167)||(37038978-37039085)
chr3 (161-222)||(8489006-8489068)
chr3 (161-222)||(37439176-37439238)
chr3 (103-184)||(12509350-12509431)
chr3 (161-217)||(9707212-9707268)
chr3 (161-217)||(16749541-16749597)
chr3 (161-217)||(19776302-19776358)
chr3 (116-184)||(36528851-36528919)
chr3 (164-222)||(14671813-14671871)
chr3 (132-194)||(17208524-17208586)
chr3 (161-217)||(4106947-4107004)
chr3 (161-217)||(4110799-4110856)
chr3 (161-217)||(15965471-15965528)
chr3 (161-217)||(15969395-15969452)
chr3 (161-217)||(15973319-15973376)
chr3 (132-185)||(22652773-22652826)
chr3 (132-184)||(16979912-16979964)
chr3 (112-203)||(18699411-18699503)
chr3 (203-237)||(6820243-6820277)
chr3 (203-237)||(15566823-15566857)
chr3 (116-184)||(3263963-3264031)
chr3 (132-184)||(14152399-14152451)
chr3 (113-181)||(14250085-14250153)
[»] chr8 (57 HSPs)
chr8 (10-237)||(20083585-20083812)
chr8 (23-188)||(19140656-19140820)
chr8 (19-180)||(6573060-6573221)
chr8 (19-188)||(42817903-42818072)
chr8 (19-170)||(5082226-5082377)
chr8 (19-184)||(5761421-5761585)
chr8 (19-180)||(6202664-6202824)
chr8 (19-180)||(37292593-37292753)
chr8 (19-194)||(6101743-6101918)
chr8 (19-188)||(39936003-39936175)
chr8 (62-234)||(31722443-31722616)
chr8 (30-189)||(20397505-20397656)
chr8 (10-131)||(20178581-20178704)
chr8 (62-237)||(22317857-22318033)
chr8 (62-194)||(45469209-45469342)
chr8 (26-237)||(22532078-22532290)
chr8 (26-237)||(22536763-22536975)
chr8 (132-237)||(18816242-18816347)
chr8 (72-194)||(36727028-36727151)
chr8 (62-184)||(20022040-20022155)
chr8 (80-184)||(17906849-17906953)
chr8 (72-194)||(23899977-23900100)
chr8 (61-180)||(39694281-39694400)
chr8 (132-184)||(4380617-4380669)
chr8 (132-188)||(18761448-18761504)
chr8 (117-184)||(23889784-23889851)
chr8 (107-185)||(36305830-36305908)
chr8 (81-184)||(19700109-19700213)
chr8 (80-185)||(17218649-17218755)
chr8 (117-184)||(22583660-22583727)
chr8 (194-237)||(38989698-38989741)
chr8 (194-237)||(39020795-39020838)
chr8 (161-222)||(21387580-21387642)
chr8 (161-222)||(21411453-21411515)
chr8 (161-222)||(21805945-21806007)
chr8 (134-184)||(23419443-23419493)
chr8 (164-222)||(23914912-23914970)
chr8 (161-217)||(18862191-18862248)
chr8 (161-217)||(21827560-21827617)
chr8 (132-184)||(22254766-22254818)
chr8 (81-184)||(23948211-23948315)
chr8 (132-184)||(26454708-26454760)
chr8 (137-188)||(22258302-22258353)
chr8 (123-237)||(36732358-36732473)
chr8 (161-222)||(21384160-21384222)
chr8 (164-222)||(25733782-25733840)
chr8 (147-184)||(17158963-17159000)
chr8 (147-184)||(23479097-23479134)
chr8 (62-237)||(42265455-42265631)
chr8 (148-184)||(19880838-19880874)
chr8 (140-180)||(34758875-34758915)
chr8 (203-237)||(17978362-17978396)
chr8 (136-189)||(22610262-22610315)
chr8 (132-184)||(12577880-12577931)
chr8 (132-184)||(22208269-22208321)
chr8 (144-188)||(23943822-23943866)
chr8 (132-180)||(25657518-25657566)
[»] scaffold1941 (1 HSPs)
scaffold1941 (19-236)||(25-242)
[»] chr2 (40 HSPs)
chr2 (19-236)||(24516073-24516290)
chr2 (16-188)||(5031125-5031297)
chr2 (19-188)||(24780836-24781005)
chr2 (19-184)||(17307373-17307538)
chr2 (19-188)||(9975816-9975985)
chr2 (19-184)||(40912207-40912372)
chr2 (19-188)||(24436535-24436704)
chr2 (36-188)||(22251444-22251596)
chr2 (19-237)||(19201146-19201365)
chr2 (19-180)||(37270587-37270747)
chr2 (60-237)||(1383490-1383667)
chr2 (19-188)||(2523743-2523912)
chr2 (62-237)||(25142133-25142309)
chr2 (19-147)||(27484514-27484642)
chr2 (19-136)||(36841151-36841268)
chr2 (132-237)||(21315423-21315528)
chr2 (132-237)||(21335213-21335318)
chr2 (60-184)||(357809-357933)
chr2 (70-193)||(27852605-27852729)
chr2 (62-194)||(3539766-3539899)
chr2 (67-237)||(22259974-22260144)
chr2 (84-218)||(44072509-44072644)
chr2 (154-237)||(23968569-23968653)
chr2 (86-222)||(23068369-23068505)
chr2 (60-184)||(22501897-22502023)
chr2 (60-184)||(22509831-22509957)
chr2 (81-184)||(25046066-25046170)
chr2 (81-184)||(5986125-5986229)
chr2 (83-222)||(9785489-9785628)
chr2 (132-184)||(25184189-25184241)
chr2 (61-115)||(24884399-24884453)
chr2 (161-217)||(1283930-1283987)
chr2 (161-217)||(30344537-30344594)
chr2 (103-194)||(14694296-14694388)
chr2 (132-184)||(21080969-21081021)
chr2 (62-191)||(18388183-18388312)
chr2 (72-169)||(18390229-18390326)
chr2 (62-184)||(19358820-19358943)
chr2 (132-180)||(21915624-21915672)
chr2 (132-176)||(18357975-18358019)
[»] chr7 (73 HSPs)
chr7 (19-237)||(14180345-14180563)
chr7 (19-237)||(20214034-20214252)
chr7 (19-237)||(20586239-20586457)
chr7 (19-188)||(12465256-12465425)
chr7 (19-188)||(32433585-32433754)
chr7 (19-185)||(13147471-13147637)
chr7 (19-188)||(8851155-8851324)
chr7 (19-188)||(11067355-11067524)
chr7 (19-185)||(20620173-20620339)
chr7 (19-188)||(12372161-12372330)
chr7 (19-188)||(12322926-12323095)
chr7 (19-194)||(46386078-46386253)
chr7 (19-180)||(10277215-10277375)
chr7 (19-188)||(16999320-16999492)
chr7 (26-184)||(12127163-12127321)
chr7 (19-189)||(24269942-24270112)
chr7 (62-237)||(15140143-15140318)
chr7 (62-236)||(13698586-13698761)
chr7 (63-237)||(15623950-15624123)
chr7 (72-194)||(14218885-14219008)
chr7 (132-237)||(3287744-3287849)
chr7 (62-237)||(13132283-13132443)
chr7 (60-184)||(47974820-47974944)
chr7 (132-237)||(47095452-47095557)
chr7 (62-194)||(48807315-48807448)
chr7 (132-234)||(708379-708481)
chr7 (55-185)||(25943041-25943171)
chr7 (62-191)||(8135231-8135359)
chr7 (132-237)||(18874612-18874717)
chr7 (62-191)||(15095630-15095759)
chr7 (83-222)||(14259346-14259484)
chr7 (154-237)||(14318094-14318177)
chr7 (132-237)||(15575595-15575701)
chr7 (26-185)||(33002055-33002206)
chr7 (122-184)||(44374833-44374895)
chr7 (122-184)||(44383698-44383760)
chr7 (84-184)||(16078281-16078382)
chr7 (72-184)||(35771441-35771554)
chr7 (83-222)||(32302177-32302317)
chr7 (106-187)||(13744655-13744736)
chr7 (84-217)||(14928256-14928389)
chr7 (84-217)||(15351722-15351855)
chr7 (72-184)||(4071759-4071872)
chr7 (80-184)||(12754612-12754716)
chr7 (132-237)||(4690609-4690715)
chr7 (164-222)||(20488368-20488426)
chr7 (64-184)||(12557853-12557973)
chr7 (80-184)||(15289052-15289157)
chr7 (161-222)||(18426343-18426405)
chr7 (103-184)||(10658851-10658932)
chr7 (161-217)||(45169552-45169609)
chr7 (132-184)||(18955330-18955382)
chr7 (164-222)||(16580649-16580707)
chr7 (113-194)||(36704561-36704642)
chr7 (132-184)||(18990847-18990899)
chr7 (132-188)||(19283056-19283112)
chr7 (132-184)||(29052182-29052234)
chr7 (132-184)||(32160200-32160252)
chr7 (132-188)||(43276740-43276796)
chr7 (132-195)||(20252171-20252234)
chr7 (83-217)||(20484926-20485060)
chr7 (138-188)||(18074643-18074693)
chr7 (132-237)||(43745656-43745762)
chr7 (62-184)||(11054642-11054765)
chr7 (132-184)||(16250222-16250274)
chr7 (132-184)||(16550005-16550057)
chr7 (132-184)||(16615605-16615657)
chr7 (132-184)||(19195611-19195663)
chr7 (64-144)||(41284963-41285043)
chr7 (114-184)||(13315082-13315152)
chr7 (136-184)||(8488094-8488142)
chr7 (136-184)||(8513753-8513801)
chr7 (132-184)||(38299748-38299800)
[»] scaffold0334 (1 HSPs)
scaffold0334 (19-237)||(405-623)
[»] chr6 (44 HSPs)
chr6 (19-237)||(15890659-15890877)
chr6 (19-188)||(7827859-7828028)
chr6 (19-188)||(19655227-19655396)
chr6 (19-188)||(23150283-23150452)
chr6 (19-188)||(27125473-27125642)
chr6 (19-188)||(18703451-18703624)
chr6 (19-188)||(18709386-18709559)
chr6 (36-184)||(27329981-27330129)
chr6 (36-184)||(27390721-27390869)
chr6 (66-237)||(18928614-18928786)
chr6 (84-183)||(24267801-24267900)
chr6 (37-189)||(19235029-19235180)
chr6 (26-237)||(28948468-28948681)
chr6 (29-189)||(30673397-30673550)
chr6 (60-191)||(18585733-18585864)
chr6 (154-237)||(32259867-32259950)
chr6 (83-222)||(19772628-19772767)
chr6 (29-189)||(19167848-19167992)
chr6 (118-185)||(27572121-27572188)
chr6 (123-184)||(15998880-15998941)
chr6 (66-185)||(19401028-19401147)
chr6 (87-217)||(22806694-22806824)
chr6 (62-194)||(23501601-23501734)
chr6 (161-215)||(27324681-27324735)
chr6 (147-222)||(15704526-15704601)
chr6 (164-222)||(2077232-2077290)
chr6 (161-222)||(31477320-31477382)
chr6 (161-217)||(16760798-16760855)
chr6 (80-184)||(31731904-31732009)
chr6 (132-184)||(12041620-12041672)
chr6 (161-217)||(16624833-16624889)
chr6 (161-217)||(22949648-22949705)
chr6 (161-217)||(22953604-22953661)
chr6 (161-217)||(23872092-23872149)
chr6 (161-217)||(23876048-23876105)
chr6 (103-184)||(24550168-24550249)
chr6 (132-184)||(15900654-15900706)
chr6 (132-184)||(15173453-15173505)
chr6 (140-180)||(29625191-29625231)
chr6 (29-94)||(18259262-18259328)
chr6 (203-237)||(23431386-23431420)
chr6 (132-184)||(19825486-19825538)
chr6 (132-184)||(23658089-23658141)
chr6 (132-184)||(29045271-29045323)
[»] chr4 (48 HSPs)
chr4 (19-237)||(15115109-15115327)
chr4 (26-237)||(37019564-37019775)
chr4 (19-188)||(25091540-25091709)
chr4 (14-187)||(11425825-11425998)
chr4 (19-188)||(53630470-53630639)
chr4 (19-188)||(10356432-10356601)
chr4 (19-188)||(16998412-16998581)
chr4 (19-188)||(19610211-19610380)
chr4 (19-188)||(42875684-42875853)
chr4 (19-180)||(46001535-46001695)
chr4 (19-180)||(6633541-6633701)
chr4 (64-237)||(9924085-9924259)
chr4 (67-237)||(14549695-14549865)
chr4 (66-237)||(11478600-11478772)
chr4 (71-237)||(19434506-19434672)
chr4 (62-234)||(9870394-9870568)
chr4 (132-237)||(14631135-14631240)
chr4 (132-237)||(16296938-16297043)
chr4 (81-184)||(21144-21248)
chr4 (132-237)||(2424333-2424439)
chr4 (43-97)||(26921708-26921762)
chr4 (103-184)||(15613061-15613142)
chr4 (83-222)||(15011432-15011571)
chr4 (103-184)||(51993532-51993613)
chr4 (161-222)||(10713356-10713418)
chr4 (161-222)||(10927126-10927188)
chr4 (132-185)||(35811375-35811428)
chr4 (132-188)||(10694241-10694297)
chr4 (132-188)||(10908007-10908063)
chr4 (161-217)||(15225581-15225637)
chr4 (150-237)||(50161463-50161550)
chr4 (164-222)||(18023041-18023099)
chr4 (128-184)||(14186955-14187010)
chr4 (132-184)||(15008963-15009015)
chr4 (85-184)||(21062593-21062693)
chr4 (134-184)||(32466194-32466244)
chr4 (161-217)||(12488214-12488271)
chr4 (161-217)||(14953676-14953733)
chr4 (161-217)||(25690410-25690467)
chr4 (29-141)||(27028642-27028754)
chr4 (132-188)||(12424286-12424342)
chr4 (132-188)||(33186903-33186959)
chr4 (132-184)||(40620532-40620584)
chr4 (62-184)||(9638939-9639062)
chr4 (132-190)||(15239810-15239868)
chr4 (136-184)||(13847205-13847253)
chr4 (132-184)||(25513851-25513903)
chr4 (205-237)||(26921455-26921487)
[»] chr1 (38 HSPs)
chr1 (19-237)||(42912936-42913154)
chr1 (19-188)||(19676598-19676767)
chr1 (19-188)||(21046045-21046214)
chr1 (19-184)||(16058314-16058478)
chr1 (19-188)||(20633627-20633799)
chr1 (60-237)||(7051869-7052046)
chr1 (36-237)||(4595800-4595994)
chr1 (26-237)||(51324398-51324610)
chr1 (132-237)||(50544872-50544977)
chr1 (80-194)||(13302849-13302964)
chr1 (60-191)||(24723344-24723475)
chr1 (29-189)||(21168831-21168990)
chr1 (81-184)||(42697732-42697836)
chr1 (62-189)||(7320589-7320716)
chr1 (132-184)||(12327743-12327795)
chr1 (103-194)||(21239039-21239130)
chr1 (62-193)||(22350646-22350777)
chr1 (74-187)||(45499342-45499446)
chr1 (81-184)||(45755468-45755572)
chr1 (132-184)||(51336479-51336531)
chr1 (161-217)||(39243644-39243700)
chr1 (161-217)||(39247199-39247255)
chr1 (161-217)||(1924675-1924732)
chr1 (161-217)||(20923689-20923746)
chr1 (132-184)||(29763632-29763684)
chr1 (132-184)||(46197745-46197797)
chr1 (60-115)||(44822090-44822145)
chr1 (136-184)||(635004-635052)
chr1 (132-184)||(17901794-17901846)
chr1 (161-217)||(41387596-41387651)
chr1 (132-184)||(50001476-50001528)
chr1 (62-184)||(38056672-38056795)
chr1 (203-237)||(14792509-14792543)
chr1 (203-237)||(24719457-24719491)
chr1 (62-95)||(8276079-8276112)
chr1 (132-185)||(22145665-22145718)
chr1 (132-184)||(6834176-6834228)
chr1 (132-184)||(28476734-28476786)
[»] scaffold0020 (2 HSPs)
scaffold0020 (19-237)||(143498-143716)
scaffold0020 (19-184)||(168999-169164)
[»] scaffold0241 (2 HSPs)
scaffold0241 (19-237)||(3069-3286)
scaffold0241 (19-126)||(2451-2558)
[»] chr5 (28 HSPs)
chr5 (26-237)||(20566448-20566651)
chr5 (19-180)||(7484890-7485050)
chr5 (19-184)||(21300044-21300209)
chr5 (60-237)||(36508580-36508757)
chr5 (19-170)||(19921525-19921676)
chr5 (36-184)||(31622029-31622169)
chr5 (132-194)||(6551280-6551342)
chr5 (60-184)||(31456888-31457012)
chr5 (66-185)||(22111762-22111881)
chr5 (66-194)||(21617918-21618047)
chr5 (80-194)||(20469166-20469281)
chr5 (161-220)||(10753867-10753926)
chr5 (76-184)||(10774664-10774771)
chr5 (61-180)||(17876132-17876251)
chr5 (132-194)||(18744874-18744936)
chr5 (132-185)||(266038-266091)
chr5 (103-184)||(10954060-10954141)
chr5 (132-181)||(30616614-30616663)
chr5 (132-184)||(17011728-17011780)
chr5 (62-184)||(21405628-21405751)
chr5 (64-185)||(31251891-31252011)
chr5 (132-188)||(23199203-23199259)
chr5 (81-184)||(25249828-25249931)
chr5 (81-184)||(25313612-25313715)
chr5 (132-184)||(29448840-29448892)
chr5 (203-237)||(20197604-20197638)
chr5 (60-94)||(30138064-30138098)
chr5 (43-80)||(22111727-22111764)
[»] scaffold0737 (2 HSPs)
scaffold0737 (19-188)||(4710-4879)
scaffold0737 (62-180)||(5821-5941)
[»] scaffold0407 (1 HSPs)
scaffold0407 (19-188)||(11270-11439)
[»] scaffold1283 (1 HSPs)
scaffold1283 (19-188)||(464-633)
[»] scaffold0001 (3 HSPs)
scaffold0001 (19-188)||(31881-32050)
scaffold0001 (19-188)||(37188-37357)
scaffold0001 (19-184)||(77574-77739)
[»] scaffold0207 (1 HSPs)
scaffold0207 (19-194)||(13382-13557)
[»] scaffold1633 (1 HSPs)
scaffold1633 (19-188)||(1092-1261)
[»] scaffold0113 (1 HSPs)
scaffold0113 (58-237)||(35418-35595)
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-194)||(146610-146785)
[»] scaffold0064 (1 HSPs)
scaffold0064 (19-185)||(58633-58799)
[»] scaffold1766 (1 HSPs)
scaffold1766 (19-184)||(696-861)
[»] scaffold0111 (3 HSPs)
scaffold0111 (19-181)||(5270-5432)
scaffold0111 (26-183)||(12534-12691)
scaffold0111 (203-237)||(12472-12506)
[»] scaffold0077 (2 HSPs)
scaffold0077 (19-188)||(34226-34395)
scaffold0077 (103-184)||(5921-6002)
[»] scaffold0149 (2 HSPs)
scaffold0149 (45-237)||(29520-29711)
scaffold0149 (60-237)||(21539-21716)
[»] scaffold0632 (1 HSPs)
scaffold0632 (19-184)||(1052-1217)
[»] scaffold0004 (5 HSPs)
scaffold0004 (19-184)||(328288-328455)
scaffold0004 (31-185)||(75691-75839)
scaffold0004 (29-185)||(72841-72989)
scaffold0004 (80-185)||(110121-110227)
scaffold0004 (109-184)||(73064-73139)
[»] scaffold0080 (2 HSPs)
scaffold0080 (19-188)||(21789-21958)
scaffold0080 (180-219)||(21637-21676)
[»] scaffold0802 (1 HSPs)
scaffold0802 (64-237)||(4656-4830)
[»] scaffold0040 (1 HSPs)
scaffold0040 (60-237)||(105998-106175)
[»] scaffold0036 (1 HSPs)
scaffold0036 (71-188)||(78181-78298)
[»] scaffold0285 (1 HSPs)
scaffold0285 (26-189)||(19655-19810)
[»] scaffold0047 (1 HSPs)
scaffold0047 (26-188)||(78958-79105)
[»] scaffold0019 (2 HSPs)
scaffold0019 (80-188)||(24127-24235)
scaffold0019 (84-217)||(30023-30156)
[»] scaffold0175 (2 HSPs)
scaffold0175 (62-237)||(8571-8747)
scaffold0175 (29-141)||(18744-18856)
[»] scaffold1186 (1 HSPs)
scaffold1186 (132-237)||(2020-2125)
[»] scaffold0005 (1 HSPs)
scaffold0005 (132-237)||(186143-186248)
[»] scaffold0112 (1 HSPs)
scaffold0112 (29-189)||(2793-2946)
[»] scaffold0956 (1 HSPs)
scaffold0956 (97-181)||(2520-2604)
[»] scaffold0174 (4 HSPs)
scaffold0174 (38-180)||(5176-5310)
scaffold0174 (38-180)||(11296-11430)
scaffold0174 (30-185)||(19605-19759)
scaffold0174 (132-184)||(5454-5506)
[»] scaffold0037 (3 HSPs)
scaffold0037 (26-194)||(112956-113125)
scaffold0037 (66-185)||(81501-81620)
scaffold0037 (60-184)||(117807-117925)
[»] scaffold0230 (1 HSPs)
scaffold0230 (60-191)||(6678-6809)
[»] scaffold0630 (1 HSPs)
scaffold0630 (154-236)||(9085-9167)
[»] scaffold0100 (1 HSPs)
scaffold0100 (36-189)||(26629-26776)
[»] scaffold0379 (1 HSPs)
scaffold0379 (67-185)||(10741-10851)
[»] scaffold0098 (1 HSPs)
scaffold0098 (109-237)||(40084-40212)
[»] scaffold0083 (3 HSPs)
scaffold0083 (60-184)||(10755-10877)
scaffold0083 (132-184)||(5045-5097)
scaffold0083 (132-184)||(1937-1989)
[»] scaffold0075 (1 HSPs)
scaffold0075 (81-184)||(60843-60947)
[»] scaffold0628 (1 HSPs)
scaffold0628 (62-184)||(1058-1181)
[»] scaffold0156 (1 HSPs)
scaffold0156 (60-178)||(16532-16650)
[»] scaffold0594 (1 HSPs)
scaffold0594 (132-237)||(2247-2352)
[»] scaffold0251 (1 HSPs)
scaffold0251 (67-222)||(20047-20202)
[»] scaffold0205 (1 HSPs)
scaffold0205 (85-217)||(30607-30739)
[»] scaffold0008 (1 HSPs)
scaffold0008 (63-195)||(135493-135625)
[»] scaffold0010 (1 HSPs)
scaffold0010 (81-184)||(126305-126407)
[»] scaffold0028 (1 HSPs)
scaffold0028 (62-194)||(3042-3174)
[»] scaffold0032 (1 HSPs)
scaffold0032 (132-184)||(61848-61900)
[»] scaffold0292 (1 HSPs)
scaffold0292 (81-222)||(7504-7645)
[»] scaffold0056 (2 HSPs)
scaffold0056 (72-192)||(67060-67181)
scaffold0056 (132-237)||(18275-18381)
[»] scaffold0848 (1 HSPs)
scaffold0848 (62-185)||(2020-2143)
[»] scaffold0203 (1 HSPs)
scaffold0203 (132-184)||(17940-17992)
[»] scaffold0123 (1 HSPs)
scaffold0123 (62-184)||(7205-7329)
[»] scaffold0256 (1 HSPs)
scaffold0256 (109-176)||(1855-1922)
[»] scaffold0034 (2 HSPs)
scaffold0034 (83-217)||(120905-121039)
scaffold0034 (132-184)||(29216-29268)
[»] scaffold0018 (1 HSPs)
scaffold0018 (85-222)||(21648-21785)
[»] scaffold0007 (2 HSPs)
scaffold0007 (57-237)||(158768-158949)
scaffold0007 (132-191)||(16412-16471)
[»] scaffold0041 (1 HSPs)
scaffold0041 (130-179)||(5712-5761)
[»] scaffold1256 (1 HSPs)
scaffold1256 (132-184)||(2200-2252)
[»] scaffold0671 (1 HSPs)
scaffold0671 (81-184)||(4888-4992)
[»] scaffold0589 (1 HSPs)
scaffold0589 (81-184)||(4333-4437)
[»] scaffold0213 (1 HSPs)
scaffold0213 (132-180)||(19207-19255)
[»] scaffold0071 (1 HSPs)
scaffold0071 (132-184)||(15272-15324)
[»] scaffold0003 (1 HSPs)
scaffold0003 (81-189)||(96347-96455)
[»] scaffold0002 (1 HSPs)
scaffold0002 (81-184)||(398510-398614)
[»] scaffold0096 (1 HSPs)
scaffold0096 (84-222)||(22050-22187)
[»] scaffold0261 (1 HSPs)
scaffold0261 (43-97)||(6620-6674)
[»] scaffold0220 (2 HSPs)
scaffold0220 (103-184)||(19924-20006)
scaffold0220 (62-95)||(13878-13911)
[»] scaffold0108 (1 HSPs)
scaffold0108 (132-237)||(6418-6524)
[»] scaffold0819 (1 HSPs)
scaffold0819 (76-184)||(5311-5418)
[»] scaffold0516 (1 HSPs)
scaffold0516 (136-184)||(5305-5353)
[»] scaffold0452 (1 HSPs)
scaffold0452 (83-222)||(12584-12723)
[»] scaffold0065 (1 HSPs)
scaffold0065 (81-184)||(52544-52648)
[»] scaffold0017 (1 HSPs)
scaffold0017 (132-237)||(26727-26833)
[»] scaffold0415 (1 HSPs)
scaffold0415 (161-217)||(904-961)
[»] scaffold0141 (1 HSPs)
scaffold0141 (161-217)||(13633-13690)
[»] scaffold0124 (1 HSPs)
scaffold0124 (161-217)||(21607-21664)
[»] scaffold0031 (1 HSPs)
scaffold0031 (161-217)||(35632-35689)
[»] scaffold0625 (1 HSPs)
scaffold0625 (132-184)||(5861-5913)
[»] scaffold0515 (1 HSPs)
scaffold0515 (132-184)||(5029-5081)
[»] scaffold0439 (1 HSPs)
scaffold0439 (61-140)||(12323-12403)
[»] scaffold0436 (1 HSPs)
scaffold0436 (132-184)||(8960-9012)
[»] scaffold0306 (1 HSPs)
scaffold0306 (132-184)||(5029-5081)
[»] scaffold0138 (2 HSPs)
scaffold0138 (132-184)||(21097-21149)
scaffold0138 (132-184)||(34112-34164)
[»] scaffold0057 (1 HSPs)
scaffold0057 (132-184)||(69853-69905)
[»] scaffold0011 (1 HSPs)
scaffold0011 (83-222)||(126742-126881)
[»] scaffold0859 (1 HSPs)
scaffold0859 (62-169)||(4612-4718)
[»] scaffold0601 (1 HSPs)
scaffold0601 (147-185)||(195-233)
[»] scaffold0229 (1 HSPs)
scaffold0229 (161-217)||(11047-11104)
[»] scaffold0157 (1 HSPs)
scaffold0157 (161-217)||(32206-32263)
[»] scaffold0853 (1 HSPs)
scaffold0853 (132-188)||(2450-2506)
[»] scaffold0577 (1 HSPs)
scaffold0577 (76-184)||(9004-9111)
[»] scaffold0572 (1 HSPs)
scaffold0572 (161-217)||(10597-10652)
[»] scaffold0462 (1 HSPs)
scaffold0462 (132-184)||(11223-11275)
[»] scaffold0431 (1 HSPs)
scaffold0431 (132-188)||(5633-5689)
[»] scaffold0061 (2 HSPs)
scaffold0061 (132-184)||(14586-14638)
scaffold0061 (132-184)||(23644-23696)
[»] scaffold0042 (1 HSPs)
scaffold0042 (132-184)||(29388-29440)
[»] scaffold0328 (1 HSPs)
scaffold0328 (62-95)||(18731-18764)
[»] scaffold0058 (1 HSPs)
scaffold0058 (147-180)||(6383-6416)
[»] scaffold0046 (1 HSPs)
scaffold0046 (147-184)||(21777-21814)
[»] scaffold0676 (1 HSPs)
scaffold0676 (132-184)||(2881-2933)
[»] scaffold0411 (1 HSPs)
scaffold0411 (103-194)||(13407-13498)
[»] scaffold0247 (1 HSPs)
scaffold0247 (132-184)||(1076-1128)
[»] scaffold0180 (1 HSPs)
scaffold0180 (62-185)||(28328-28451)
[»] scaffold0151 (1 HSPs)
scaffold0151 (69-184)||(31046-31160)


Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 40807883 - 40808101
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  40807883 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40807982  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  40807983 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctc 40808082  T
Q  219 ctctgactcttctcttctc 237  Q
    |||||||||||||||||||    
T  40808083 ctctgactcttctcttctc 40808101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 44274305 - 44274522
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||    
T  44274305 acatcaattctacacaaattcaatgaattttctactctattaacaaccaattacaacttcaaaatataattcccaaattcccataactacaacctacaac 44274404  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  44274405 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctc 44274504  T
Q  219 ctctgactcttctcttct 236  Q
    ||||||||||||||||||    
T  44274505 ctctgactcttctcttct 44274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 10563596 - 10563813
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| |||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  10563596 acatcaattctac-caaattcaacggcttttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaaactacaac 10563694  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||    
T  10563695 atgctaaactcaatttcataattatacaacttaaaattagagaaagttagtcccaccattaccttagattgatcgacgaaggactctaccgctttctctc 10563794  T
Q  219 ctctgactcttctcttctc 237  Q
    |||| ||||||||||||||    
T  10563795 ctctaactcttctcttctc 10563813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 11259318 - 11259487
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11259318 acatcacttctacacaaattcaacggattttctactttattaacaatcaattacaacttcaaaacctaattcccaaattctcataactacaatctacaac 11259417  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11259418 atgctaaattcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 11259487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 40812720 - 40812895
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  40812720 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40812819  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  40812820 atgctaaactcaatttcagaattatgcaacttagaattagagaaagttagtcccacccttaccttagattgatcga 40812895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 10 - 184
Target Start/End: Original strand, 49900608 - 49900782
Alignment:
Q  10 atgagatggacatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactaca 109  Q
    |||| ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49900608 atgatatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 49900707  T
Q  110 aactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  49900708 acctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaaattagtcccacccttacctta 49900782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 17044853 - 17045022
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  17044853 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17044952  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17044953 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 17045022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 22306746 - 22306579
Alignment:
Q  21 atcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacat 120  Q
    ||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  22306746 atcacttatgcacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcccataactacaacctacaacat 22306647  T
Q  121 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22306646 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 22306579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 17047013 - 17047182
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||||    
T  17047013 acatcaattctacacaaattcaacggattttttactctattaacaaccaattacaacttcaaaacttaattcccaaattcaaataactacaacctacaac 17047112  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17047113 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 17047182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 17519038 - 17518873
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  17519038 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17518939  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  17518938 attctaaagtcaatttcagaattatacaacttagaattagagaaagttagtcccacccttgcctta 17518873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 17533900 - 17533735
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  17533900 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17533801  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  17533800 attctaaagtcaatttcagaattatacaacttagaattagagaaagttagtcccacccttgcctta 17533735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 17538993 - 17539162
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||||||    
T  17538993 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacatcttcaaaacctaatttccaaattcccataactacaacctacaac 17539092  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17539093 atgataaaatcaatttcagaattatacaacttagaattagataaagttagtctcacccttaccttaaatt 17539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 10311415 - 10311575
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10311415 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10311513  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  10311514 atgcaaaattcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 10311575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 17693954 - 17694123
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||  ||||||||||| |||||||    
T  17693954 acatcaattctacacaaattcaacggattttctactctattaacgatcaattacaacttcaaaatctaattcacaaatttccataactacaacctacaac 17694053  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17694054 atgctaaactcaattttagaattatacaacttagaattagagaaagttagtctcacccttacattaaatt 17694123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 19568366 - 19568155
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    |||||||| ||||||||||||| |||||| |   ||| ||||||||||||||| || |||||||||||||||| || |||||||| ||||||| || |||    
T  19568366 ttctacaccgattcaacggattctctactattacaactaccaattacaacttctaaccctaattcccaaattcccaaaactacaacctacaacctgttaa 19568267  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgac 225  Q
    |   | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  19568266 atctagtttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaaggactctaccgctatctctcctctgac 19568167  T
Q  226 tcttctcttctc 237  Q
    ||||||||||||    
T  19568166 tcttctcttctc 19568155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 41172534 - 41172367
Alignment:
Q  21 atcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacat 120  Q
    |||| ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  41172534 atcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattccctaattcccataactacaacctacaacat 41172435  T
Q  121 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||| |||||||||||||||||    
T  41172434 gctaaactcaatttcagagttatacaacttataagtagagaaagttagtcccacccttaccttaaatt 41172367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 50348191 - 50348041
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  50348191 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 50348092  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagt 169  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  50348091 atgctaaactcaattttaaaattatacaacttagaattagagaaagttagt 50348041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 33565018 - 33565192
Alignment:
Q  64 accaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaa 162  Q
    ||||||||||||||| |||||||||| |||||||| || |||| ||| ||||||| || |||| ||||||| ||||||||||| ||||||||||||||||    
T  33565018 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaa 33565117  T
Q  163 agttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33565118 agttagtcacacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 33565192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 35354489 - 35354658
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||| ||||||||||| | |||||    
T  35354489 acatcaattctacacaaattcaacggattttctactctaccaacaatcaattacaacttcaaaacctaatttccaaattcccataactacaaccaacaac 35354588  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||| ||||||||    
T  35354589 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttagtcccacacttagcttaaatt 35354658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 15931672 - 15931504
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||| ||||||||||||||||| ||  |||||||||||| |||||||||||| |||||||||||||||||| ||| |||    
T  15931672 acatcaattctacacaaattcaacgaattttctactctattaataattaattacaacttcgaaacctaattccaaaattctcataactacaacctaaaac 15931573  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  15931572 atgctaaactctatttcagaattatac-acttagaattagagaaagttagtctcacctttaccttaaatt 15931504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 35961049 - 35960875
Alignment:
Q  64 accaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaa 162  Q
    ||||||||||||||| |||||||||| |||||||  || |||| ||| ||||||| || |||| ||||||| ||||||||||| || |||||||||||||    
T  35961049 accaattacaacttctaaacctaatttccaaatttccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacatagaattagagaa 35960950  T
Q  163 agttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35960949 agttaatcccacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 35960875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 14508758 - 14508903
Alignment:
Q  44 gattttctactctattaacaaccaattacaacttc-aaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaatta 142  Q
    |||| |||||||| |  |||||||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  14508758 gattatctactctttctacaaccaattacaacttccaaaacctaattccaaaattcccataactacaacctacaacatgctaacctcaatttcagaatta 14508857  T
Q  143 tacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14508858 tacaacttagaattagagaaagttagtctcacccttaccataaatt 14508903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 42324094 - 42323918
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| || ||||||| |||||||| || |||||||| ||||||||||  ||| ||||||| ||||||||||||||||| ||||| |     
T  42324094 caaccaattacaacttctaaccctaatttccaaattcccaaaactacaacctacaacatgtcaaattcaattttcagaattatacaacttaaaattaaat 42323995  T
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    || ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42323994 aatgttagtcccacccttaccttagactgatcgacgaaggactctaccgctttctctcctcggactcttctcttctc 42323918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 5200284 - 5200190
Alignment:
Q  143 tacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5200284 tacaacttagaattagagaaagttagtcccacccttaccttagatggatcgacgaaggactctaccgctttctctcctctgactcttttcttctc 5200190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 191
Target Start/End: Complemental strand, 9511062 - 9510909
Alignment:
Q  38 tcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcag 137  Q
    ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||| ||||||| || |||||||| |||| || || ||||  || ||||||    
T  9511062 tcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgttaaatccagtttcag 9510963  T
Q  138 aattatacaacttagaattagagaaagttagtctcacccttaccttaaattgat 191  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  9510962 aatcatacaacttagaattagagaaagttagtttcacccttaccttagattgat 9510909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 191
Target Start/End: Complemental strand, 9519037 - 9518884
Alignment:
Q  38 tcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcag 137  Q
    ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||| ||||||| || |||||||| |||| || || ||||  || ||||||    
T  9519037 tcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgttaaatccagtttcag 9518938  T
Q  138 aattatacaacttagaattagagaaagttagtctcacccttaccttaaattgat 191  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  9518937 aatcatacaacttagaattagagaaagttagtttcacccttaccttagattgat 9518884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 35064658 - 35064566
Alignment:
Q  67 aattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35064658 aattacaacttcaaaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttcaaaattatacaacttagaattaga 35064566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 6156732 - 6156815
Alignment:
Q  154 attagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6156732 attagagaaagctagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 6156815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 5215647 - 5215749
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    ||||| |||||||||||| |  ||||||||||| ||||  ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  5215647 tttcataattatacaactcattattagagaaagctagtgccacccttaccttatattgatcgacgaaggactctaccgctttctctcccctgactcttct 5215746  T
Q  232 ctt 234  Q
    |||    
T  5215747 ctt 5215749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 14520450 - 14520551
Alignment:
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttc 235  Q
    |||||||||||||  |  |||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14520450 agaattatacaacccattattaaagaaagctagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctcctctggctcttctcttc 14520549  T
Q  236 tc 237  Q
    ||    
T  14520550 tc 14520551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 16050875 - 16050979
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    ||||||||||| ||||| |||| ||||||||  |||||| || ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  16050875 aaacctaattctcaaatcctcaaaactacaacatacaacttgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccaccctta 16050974  T
Q  180 cctta 184  Q
    |||||    
T  16050975 cctta 16050979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 22758935 - 22758796
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    |||||||||||||| |||| ||||| || |||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| ||||||||||||||||||    
T  22758935 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtctcacccttacc 22758837  T
Q  182 ttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||  |||||||||||||||||||||||||||||||| ||||    
T  22758836 ttggattgatcgacgaaggactctaccgctttctcttctct 22758796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 11563654 - 11563777
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    ||||||||||||||||  ||||||||||||||||||| || |||||||| ||||||| || |||| |  |||| ||||||||||| ||||||||||||||    
T  11563654 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacttgttaaatttgattttcagaattataccacttagaattagag 11563753  T
Q  161 aaagttagtctcacccttacctta 184  Q
    || ||||||| |||||||||||||    
T  11563754 aaggttagtcccacccttacctta 11563777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 17541423 - 17541490
Alignment:
Q  121 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17541423 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 17541490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 49968981 - 49968858
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 160  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||| ||||||| || |||| |||| ||||||||| |||| |||||||||||| |    
T  49968981 caaccaattacaacttataaacctaattcccaaattctcaaaactacaagctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 49968883  T
Q  161 aaagttagtctcacccttaccttaa 185  Q
    || ||||||| ||| ||||||||||    
T  49968882 aaggttagtcccactcttaccttaa 49968858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 13185834 - 13185957
Alignment:
Q  72 caacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttc-agaattatacaacttagaattagagaaagttagtc 170  Q
    ||||||| ||||||||||||||||||  || |||||||| ||||||| || |||| || ||||  |||||||||  ||||| ||||||||||||||||||    
T  13185834 caacttctaaacctaattcccaaatttccaaaactacaacctacaacttgttaaattcgatttttagaattatatcacttaaaattagagaaagttagtc 13185933  T
Q  171 tcacccttaccttaaattgatcga 194  Q
     ||||||||||||| |||||||||    
T  13185934 ccacccttaccttagattgatcga 13185957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 2841536 - 2841458
Alignment:
Q  154 attagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctc 232  Q
    ||||||||||| ||||| ||||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||||||    
T  2841536 attagagaaagctagtcacacccttaccttagattgatcgacaaaggactataccgctttctcccctctgactcttctc 2841458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 35064745 - 35064681
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaac 83  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35064745 acatcaattctacacaaattcaacggattttctactatattaacaaccaattacaacttcaaaac 35064681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 5200335 - 5200277
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaactt 77  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5200335 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 5200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 15446920 - 15446868
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  15446920 tttcagaataatacaacttagaattagagaaagttagtcccacccttacctta 15446868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 15566744 - 15566792
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15566744 tttcagaattatacaacttagaattagagaaagttagtcccacccttac 15566792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 24177840 - 24177736
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||| |||||||||||||  || |||||||| |||| || |  ||||  || |||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  24177840 aaacataattcccaaatttccaaaactacaacctaccacctattaaatccagtttcagaattatacaacttataattagagaaagtttgtcccaccctta 24177741  T
Q  180 cctta 184  Q
    |||||    
T  24177740 cctta 24177736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 43888856 - 43888717
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    |||||||||||||| |||| ||||| || |||||||||| ||||  | |||| |||||||| |  |||||||||||  ||  | ||||| ||||||||||    
T  43888856 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaataccattttcagaattaaaacacttagaattattgatggctagtcccacccttacc 43888758  T
Q  182 ttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||  |||||||||||||||||||||||| ||||||| ||||    
T  43888757 ttggattgatcgacgaaggactctaccgttttctcttctct 43888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 11885658 - 11885560
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    |||||||| ||||||| || |||||||| ||||||| || ||||  |||||| ||||||||||  |||||||||||||||||||||||| ||||||||||    
T  11885658 cctaattctcaaattccca-aactacaacctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccacccttacc 11885560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 37038978 - 37039085
Alignment:
Q  62 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattaga 159  Q
    ||||||||||||||||  || ||||||| ||||||||| || |||||||| |||||||||| ||||  |||||| ||||||||||||||||| ||||| |    
T  37038978 caaccaattacaacttttaaccctaatttcccaaattcccaaaactacaacctacaacatgttaaatccaattttcagaattatacaacttataattaaa 37039077  T
Q  160 gaaagtta 167  Q
    ||| ||||    
T  37039078 gaatgtta 37039085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 8489068 - 8489006
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  8489068 aaagttagtctcacccttacctttggattgatcgacgaaggactctaccgctttctcttctct 8489006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 37439238 - 37439176
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  37439238 aaagttagtctcacccttacctttggattgatcgacgaaggactctaccgctttctcttctct 37439176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 12509431 - 12509350
Alignment:
Q  103 aactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||  |||| ||||| ||||  ||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||    
T  12509431 aactacatcctaccacatgttaaatccaatttcagaattatacaacttagaattaaagaaggtttgtcccacccttacctta 12509350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 9707268 - 9707212
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||    
T  9707268 aaagttagtctcacccttaccttggattgatcgacgaagaactataccgctttctct 9707212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 16749597 - 16749541
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||    
T  16749597 aaagttagtctcacccttaccttggattgatcgacgaagaactataccgctttctct 16749541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 19776302 - 19776358
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||    
T  19776302 aaagttagtctcacccttaccttggattgatcgacgaagaactataccgctttctct 19776358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 36528851 - 36528919
Alignment:
Q  116 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||| ||||| |||| |||||||||||  ||||||||||||||||||||| || |||||||||||||    
T  36528851 aacatgttaaacccaatctcagaattatattacttagaattagagaaagttaatcccacccttacctta 36528919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 14671813 - 14671871
Alignment:
Q  164 gttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||||||| ||||||||||||  ||||||| |||||||||||||||||||||||| ||||    
T  14671813 gttagtcccacccttaccttggattgatcaacgaaggactctaccgctttctcttctct 14671871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 17208524 - 17208586
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    |||||||||||||||||| |  ||||||||||| ||||| ||||||||||||| |||||||||    
T  17208524 tttcagaattatacaactcattattagagaaagctagtcccacccttaccttagattgatcga 17208586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 4107004 - 4106947
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  4107004 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 4106947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 4110856 - 4110799
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  4110856 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 4110799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 15965471 - 15965528
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  15965471 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 15965528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 15969395 - 15969452
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  15969395 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 15969452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 15973319 - 15973376
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  15973319 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 15973376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 22652773 - 22652826
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| ||||||||||    
T  22652773 tttcagaattaaattacttagaattagagaaagttagtcccactcttaccttaa 22652826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 16979912 - 16979964
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  ||||||||||| |||||||||||| |||||||||||||    
T  16979912 tttcagaattaaaatacttagaattaaagaaagttagtcccacccttacctta 16979964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 18699503 - 18699411
Alignment:
Q  112 ctacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggact 203  Q
    |||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||| ||||||||||||  ||||||||||||||||||    
T  18699503 ctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttaccttggattgatcgacgaaggact 18699411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 6820243 - 6820277
Alignment:
Q  203 tctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||| |||||||||||||||||||    
T  6820243 tctaccgctttctcttctctgactcttctcttctc 6820277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Original strand, 15566823 - 15566857
Alignment:
Q  203 tctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||| |||||||||||||||||||    
T  15566823 tctaccgctttctcttctctgactcttctcttctc 15566857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 3264031 - 3263963
Alignment:
Q  116 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| ||  ||||||||||||    
T  3264031 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatccgacccttacctta 3263963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 14152451 - 14152399
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||| |||||||| |  ||||||||||| ||||| |||||||||||||    
T  14152451 tttcagaatgatacaactcattattagagaaagctagtcccacccttacctta 14152399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 14250153 - 14250085
Alignment:
Q  113 tacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    ||||||||| ||||  |||||| | ||||| |||||||||||||| |||| ||||||| ||| ||||||    
T  14250153 tacaacatgttaaatccaatttgaaaattacacaacttagaattaaagaaggttagtcccactcttacc 14250085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 20083812 - 20083585
Alignment:
Q  10 atgagatggacatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactaca 109  Q
    |||| ||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20083812 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactaca 20083713  T
Q  110 aactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccg 209  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  20083712 acctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttacactgatcgacgaaggactctaccg 20083613  T
Q  210 ctttctctcctctgactcttctcttctc 237  Q
    ||||||||| ||||||||||||||||||    
T  20083612 ctttctctcatctgactcttctcttctc 20083585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 19140656 - 19140820
Alignment:
Q  23 cacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgc 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||    
T  19140656 cacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacttgc 19140755  T
Q  123 taaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  19140756 taaactcaatttcagaattatacaacttagaattagagaaag-tagtcccacccttaccttaaatt 19140820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 6573221 - 6573060
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  6573221 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctcattcccaaattcccataactacaacctacaac 6573122  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6573121 atgctaaactcaatttcaaaattatacaacttagaattagagaaagttagtctcacccttac 6573060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 42818072 - 42817903
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||    
T  42818072 acatcaattctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaatctaatttccaaattcccataactacaacctacaac 42817973  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  42817972 atgctaaactcaatttcagaattatacaacttagaattagagaaagtaagtcccacccttaccttaaatt 42817903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 5082377 - 5082226
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  5082377 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5082278  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 170  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5082277 atgctaaactcaatttcataattatacaacttagaattagagaaagttagtc 5082226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 5761421 - 5761585
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  5761421 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5761520  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||    
T  5761521 atgctaaactcaatttcaaaattatac-acttagaattagagaaagttagtcccacccttacctta 5761585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 6202664 - 6202824
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  6202664 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6202762  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6202763 atgcaaaattcaatttcagaattatacaacgtagaattagagaaagttagtctcacccttac 6202824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 37292593 - 37292753
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  37292593 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 37292691  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  37292692 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37292753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 6101918 - 6101743
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| | ||||||| ||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| |||||||    
T  6101918 acatcaatactacacaaattcaatagattttctactctattaacaaccaattataacttcaaaacctgattcccaaattcccataactacaacctacaac 6101819  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  6101818 atgctaaacacaatttcagaattatacaacttagaattagagaaagttagtcccacctttaccttagattgatcga 6101743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 39936175 - 39936003
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaa---actac 115  Q
    |||||| || |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||   || ||    
T  39936175 acatcaattgtacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcgcaaattcccataactacaacctacaac 39936076  T
Q  116 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  39936075 aacatgctaaactcaatttcataattatacaacttagaattagagaaagttaatcccacccttaccttaaatt 39936003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 62 - 234
Target Start/End: Complemental strand, 31722616 - 31722443
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| ||||| |||| |||||||| || |||||||| ||||||| || |||| || |||| || |||||||| ||||||||||||||    
T  31722616 caaccaattacaacttctaaaccaaatttccaaattcccaaaactacaacctacaacttgttaaattcgattttcaaaattataccacttagaattagag 31722517  T
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctctt 234  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  31722516 aaagttagtcccacccttatcttagattgatcgacgaaggactctaccactttctttcctctaactcttctctt 31722443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 20397656 - 20397505
Alignment:
Q  30 acacagattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaact 128  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||         || |||||||||||||||    
T  20397656 acacaaattcaatggattttctactctattaacaacctaattacaactttaaaacctaattcccaaaatcaca---------acaacaacatgctaaact 20397566  T
Q  129 caatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattg 189  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||    
T  20397565 caatttcagaattatacaacttagaattagagaaagttaatcccacccttaccttagattg 20397505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 20178704 - 20178581
Alignment:
Q  10 atgagatggacatcacttctacacagattcaacggattttctactctattaacaaccaatt-acaacttcaaaacctaattcccaaattctcataactac 108  Q
    |||| ||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20178704 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaatttacaacttcaaaacctaattcccaaattctcataactac 20178605  T
Q  109 aaactacaaca-tgctaaactcaa 131  Q
    || |||||||| ||||||||||||    
T  20178604 aacctacaacattgctaaactcaa 20178581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 22318033 - 22317857
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| |||||||| |||||||||| |  |||||||| ||| ||| || |||| |||| ||||||||| |||| |||||||||||| |    
T  22318033 caaccaattacaacttctaaacctaaatcccaaattcccgaaactacaacctagaacctgttaaattcaattttcagaatcatac-acttagaattagtg 22317935  T
Q  161 aaagttagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    || ||||||| ||||||||||||| |||||| || || | |  |||||||||||||||||||||||||||||||||||    
T  22317934 aaggttagtcccacccttaccttagattgattgatcgcaaggttctaccgctttctctcctctgactcttctcttctc 22317857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 45469342 - 45469209
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| |||| |||||||||||||  || ||||| || ||||||| || |||| || |||| ||||||||||| ||||||||||||||    
T  45469342 caaccaattacaacttctaaacataattcccaaatttacaaaactataacctacaacttgttaaattcgattttcagaattataccacttagaattagag 45469243  T
Q  161 aaagttagtctcacccttaccttaaattgatcga 194  Q
    |||||||||||||||||||||||| |||||||||    
T  45469242 aaagttagtctcacccttaccttagattgatcga 45469209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 22532290 - 22532078
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||||||  |||||||  |||||||||| |   ||||| ||||||||||||  ||||||||||||||| ||  || |||||||| |||| || || |||    
T  22532290 ttctacaccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctaccacctgttaa 22532191  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctctga 224  Q
    |  || ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| || ||   |  |||| || ||||||| ||||||    
T  22532190 atccagtttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctga 22532091  T
Q  225 ctcttctcttctc 237  Q
    |||||||||||||    
T  22532090 ctcttctcttctc 22532078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 22536975 - 22536763
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||||||  |||||||  |||||||||| |   ||||| ||||||||||||  ||||||||||||||| ||  || |||||||| |||| || || |||    
T  22536975 ttctacaccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctaccacctgttaa 22536876  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctctga 224  Q
    |  || ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| || ||   |  |||| || ||||||| ||||||    
T  22536875 atccagtttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctga 22536776  T
Q  225 ctcttctcttctc 237  Q
    |||||||||||||    
T  22536775 ctcttctcttctc 22536763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 18816347 - 18816242
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||  |   |||||||||| ||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  18816347 tttcagaattatacaacccatttttagagaaagctagtcccacccttaccttatattgatcgacgaaggactttaccgctttctctcctccgactcttct 18816248  T
Q  232 cttctc 237  Q
    ||||||    
T  18816247 cttctc 18816242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 36727151 - 36727028
Alignment:
Q  72 caacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtc 170  Q
    ||||||| ||||||||||| ||||| |  | |||||||| ||||||| || ||||  |||||| ||||||||||| ||||||||||||||||||||||||    
T  36727151 caacttctaaacctaattctcaaatcccaaaaactacaacctacaacttgttaaatccaattttcagaattataccacttagaattagagaaagttagtc 36727052  T
Q  171 tcacccttaccttaaattgatcga 194  Q
    |||||||||||||| |||||||||    
T  36727051 tcacccttaccttagattgatcga 36727028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 20022155 - 20022040
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| ||||||||||||||||        ||||||| ||||||| || |||| || |||| ||||||||||| ||||||||||||||    
T  20022155 caaccaattacaacttctaaacctaattcccaaa--------actacaacctacaacttgttaaattcgattttcagaattataccacttagaattagag 20022064  T
Q  161 aaagttagtctcacccttacctta 184  Q
    |||||||||| |||||||||||||    
T  20022063 aaagttagtcccacccttacctta 20022040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 17906953 - 17906849
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    ||||||||||| ||||| | ||  ||||||| ||||||| || ||||  || ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  17906953 aaacctaattctcaaatccccaacactacaacctacaacttgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccaccctta 17906854  T
Q  180 cctta 184  Q
    |||||    
T  17906853 cctta 17906849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 23900100 - 23899977
Alignment:
Q  72 caacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtc 170  Q
    ||||||| ||||||| ||| ||||| | || |||||||  ||||||| || |||| |||||| ||||| |||||  ||||||||||||||||||||||||    
T  23900100 caacttctaaacctagttctcaaatccccaaaactacagcctacaacttgttaaattcaattctcagagttatatcacttagaattagagaaagttagtc 23900001  T
Q  171 tcacccttaccttaaattgatcga 194  Q
     ||||||||||||| |||||||||    
T  23900000 acacccttaccttagattgatcga 23899977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 39694400 - 39694281
Alignment:
Q  61 acaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagag 160  Q
    ||||| ||||||||| || || |||||||||||||||| || |||||||| ||||||| || ||||  || ||||||||| |||||||||| ||||||||    
T  39694400 acaactaattacaacgtctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaatccagtttcagaatcatacaacttataattagag 39694301  T
Q  161 aaagttagtctcacccttac 180  Q
    |||| ||||| | |||||||    
T  39694300 aaagctagtcacgcccttac 39694281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 4380669 - 4380617
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4380669 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 4380617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 18761448 - 18761504
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  18761448 tttcagaattataccacttagaattagagaaagttagtcgcacccttaccttaaatt 18761504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 23889784 - 23889851
Alignment:
Q  117 acatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  23889784 acatgttaaattcaatttcagaattatacaacctagaattagagaaagttaatctcacccttagctta 23889851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 36305830 - 36305908
Alignment:
Q  107 acaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    |||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||||||||| || ||||||||| ||||    
T  36305830 acaaacaacaacatgctaaactcaatttcataattatacaacctaaaattaaagaaagttaatcacacccttacgttaa 36305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 19700109 - 19700213
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||| | ||||| |||| |||||||| |||||||||| ||||  | ||| | |||||||||||||||||||||| |||| ||||||| ||||||||    
T  19700109 aacctaatcctcaaatcctcaaaactacaacctacaacatgttaaatccgattcttagaattatacaacttagaattaaagaaggttagtcccaccctta 19700208  T
Q  180 cctta 184  Q
    |||||    
T  19700209 cctta 19700213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 17218649 - 17218755
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaa-ctcaatttcagaattatacaacttagaattagagaaagttagtctcaccctt 178  Q
    ||||||||||| ||||| |||| ||| |||| ||||||  ||||||| || | |||||||||||||  |||||||| ||||||||||||||| |||||||    
T  17218649 aaacctaattctcaaatcctcaaaacaacaacctacaaattgctaaatctaattttcagaattataatacttagaactagagaaagttagtcccaccctt 17218748  T
Q  179 accttaa 185  Q
    | |||||    
T  17218749 atcttaa 17218755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 22583727 - 22583660
Alignment:
Q  117 acatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||| |||| ||||||||||||||||||||| |||||||| |||| |||| || |||||||||||||    
T  22583727 acatgttaaattcaatttcagaattatacaacctagaattaaagaatgttaatcccacccttacctta 22583660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 38989698 - 38989741
Alignment:
Q  194 acgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  38989698 acgaaggactctaccgctttctctactctgactcttctcttctc 38989741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 39020795 - 39020838
Alignment:
Q  194 acgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  39020795 acgaaggactctaccgctttctctactctgactcttctcttctc 39020838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 21387580 - 21387642
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||||||||||||||||||   |||||||||||||||| ||||||||||||||| ||||    
T  21387580 aaagttagtctcacccttacctttggattgatcgacgaaggaatctaccgctttctcttctct 21387642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 21411453 - 21411515
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||||||||||||||||||   |||||||||||||| ||||||||||||||||| ||||    
T  21411453 aaagttagtctcacccttacctttggattgatcgacgaagaactctaccgctttctcttctct 21411515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 21805945 - 21806007
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||||||||||||||||||   |||||||||||||| ||||||||||||||||| ||||    
T  21805945 aaagttagtctcacccttacctttggattgatcgacgaagaactctaccgctttctcttctct 21806007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 23419443 - 23419493
Alignment:
Q  134 tcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  23419443 tcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 23419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 23914912 - 23914970
Alignment:
Q  164 gttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||||||| ||||||||||||  |||||||||||| ||||||||||||||||||| ||||    
T  23914912 gttagtcccacccttaccttggattgatcgacgatggactctaccgctttctcttctct 23914970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 18862248 - 18862191
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  18862248 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 18862191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 21827617 - 21827560
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  21827617 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 21827560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 22254766 - 22254818
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||  |||||||||||||||||||||||| |||| ||||||||    
T  22254766 tttcagaattataacacttagaattagagaaagttagtcccaccattacctta 22254818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 23948211 - 23948315
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||| ||||| | || |||||||| ||||||| || ||||  || ||| |||||| |||||||||||||||| |||| ||||||  ||||||||    
T  23948211 aacctaattctcaaatccccaaaactacaacctacaacttgttaaatccacttttcagaatcatacaacttagaattaaagaaggttagtaccaccctta 23948310  T
Q  180 cctta 184  Q
    |||||    
T  23948311 cctta 23948315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 26454708 - 26454760
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  26454708 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 26454760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 22258353 - 22258302
Alignment:
Q  137 gaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||| |  ||||||||||| |||||||||||||||||||||||    
T  22258353 gaattatacaactcattattagagaaagctagtctcacccttaccttaaatt 22258302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 36732473 - 36732358
Alignment:
Q  123 taaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt-gatcgacgaaggactctaccgctttctctcctc 221  Q
    |||||||  |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||  || |||   || | |  ||||||||||||||| |||    
T  36732473 taaactctttttcagaattatacaacccattattagagaaagctagtcacacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 36732374  T
Q  222 tgactcttctcttctc 237  Q
    ||||||||||||||||    
T  36732373 tgactcttctcttctc 36732358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 21384160 - 21384222
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||||||||||||||| |||||||   ||||||||| |||||||||||||||||||||| ||||    
T  21384160 aaagttagtctcaccattacctttggattgatcgatgaaggactctaccgctttctcttctct 21384222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 25733840 - 25733782
Alignment:
Q  164 gttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||||||| ||||||||||||  |||||||  ||||||||||||||||||||||| ||||    
T  25733840 gttagtcccacccttaccttggattgatcttcgaaggactctaccgctttctcttctct 25733782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 17159000 - 17158963
Alignment:
Q  147 acttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||| |||||||||||||    
T  17159000 acttagaattagagaaagttagtcccacccttacctta 17158963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 23479097 - 23479134
Alignment:
Q  147 acttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||| |||||||||||||    
T  23479097 acttagaattagagaaagttagtcccacccttacctta 23479134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 42265631 - 42265455
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 160  Q
    |||||| || ||||||| || |||||||||||||||| || |||||||| ||||||| || |||| |||| ||||||||| |||  ||| ||| |||       
T  42265631 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaatcata-tactcagacttatta 42265533  T
Q  161 aaagttagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    || ||||||| ||||||||||||  |||||| || || | |  || |||||||||| |  ||||||||||||||||||    
T  42265532 aaggttagtcccacccttaccttggattgattgatcgcaaggttccaccgctttcttttatctgactcttctcttctc 42265455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 19880838 - 19880874
Alignment:
Q  148 cttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||||||||||||| |||||||||||||    
T  19880838 cttagaattagagaaagttagtcccacccttacctta 19880874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 34758875 - 34758915
Alignment:
Q  140 ttatacaacttagaattagagaaagttagtctcacccttac 180  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  34758875 ttatacaacgtagaattagagaaagttagtcccacccttac 34758915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 17978396 - 17978362
Alignment:
Q  203 tctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||| |||||||||||||||||||    
T  17978396 tctaccgctttctcttctctgactcttctcttctc 17978362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 22610315 - 22610262
Alignment:
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttaccttaaattg 189  Q
    ||||| |||||||| |  ||||||||||||||||| ||||||||||||| ||||    
T  22610315 agaatcatacaactcattattagagaaagttagtcccacccttaccttagattg 22610262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 12577880 - 12577931
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||| ||||||||||||| |  ||||||||||||||||| |||||||||||||    
T  12577880 tttcggaattatacaact-attattagagaaagttagtcccacccttacctta 12577931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 22208269 - 22208321
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||    
T  22208269 tttcagaattatacaacccattattagagaaagctagtcccacccttacctta 22208321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 23943866 - 23943822
Alignment:
Q  144 acaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||| ||  | |||||||||||||||||    
T  23943866 acaacttagaattagagaaagctatacccacccttaccttaaatt 23943822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 25657566 - 25657518
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    ||||||||||| |  ||||||||||||||||||||| || |||||||||    
T  25657566 tttcagaattaaaatacttagaattagagaaagttactcccacccttac 25657518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 25 - 242
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  25 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 124  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  125 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctc 224  T
Q  219 ctctgactcttctcttct 236  Q
    ||||||||||||||||||    
T  225 ctctgactcttctcttct 242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 24516073 - 24516290
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  24516073 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 24516172  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  24516173 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctc 24516272  T
Q  219 ctctgactcttctcttct 236  Q
    ||||||||||||||||||    
T  24516273 ctctgactcttctcttct 24516290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 5031297 - 5031125
Alignment:
Q  16 tggacatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactac 115  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  5031297 tggacatcacttctacacaaattcaacgaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 5031198  T
Q  116 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5031197 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 5031125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 24781005 - 24780836
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||  |    
T  24781005 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacttc 24780906  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24780905 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 24780836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 17307373 - 17307538
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  17307373 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17307472  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17307473 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17307538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 9975816 - 9975985
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  9975816 acatcaattctacacaaattcagcggattgtctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 9975915  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  9975916 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccaacccttaccttaaatt 9975985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 40912207 - 40912372
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  40912207 acatcatttctacacaaattcaacgaattttctactctattaacaaccaactacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40912306  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40912307 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 40912372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 24436535 - 24436704
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  24436535 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaatttccaaattcccataactacaacctacaac 24436634  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  24436635 atgctaaactcaatttcagaattatacaacttagaattcgagaaagttagtcccacccttatcttaaatt 24436704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 22251596 - 22251444
Alignment:
Q  36 attcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttc 135  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  22251596 attcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttc 22251497  T
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  22251496 agaattatacaacttagaattagagaaaattagtttcacccttaccttaaatt 22251444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 237
Target Start/End: Complemental strand, 19201365 - 19201146
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  19201365 acatcaattctacccaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcctataactacaacctacaac 19201266  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt-gatcgacgaaggactctaccgctttctct 217  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||   || | |  |||||||||||||||    
T  19201265 atgataaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaacttaggttagatgatcgcaaggttctaccgctttctct 19201166  T
Q  218 cctctgactcttctcttctc 237  Q
     |||||||||||| ||||||    
T  19201165 tctctgactcttcccttctc 19201146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 37270587 - 37270747
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  37270587 acatcacttctac-caaattcaacggattttctactctattaacaacccattacaacttcaaaacttaattctcaaattctcataactacaacctacaac 37270685  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  37270686 atgctaaactcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 1383667 - 1383490
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||| |||| || || ||||  || ||||||||| ||||||||||||||||||    
T  1383667 aacaaccaattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatgatacaacttagaattaga 1383568  T
Q  160 gaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  1383567 gaaagttagtctcacccttacctcagattgatcgacgaaggactctaccactttctctcctctgactcttgtcttctc 1383490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 2523912 - 2523743
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| |||| |||| |||||||| ||||||||||||||||| |||||||||||| || ||||||||||| |||||||| ||||| ||||| |||||||    
T  2523912 acatcaattctgcacaaattcaacgaattttctactctattaataaccaattacaatttaaaaacctaatttccaaattcccataaatacaacctacaac 2523813  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2523812 atgttaaactcaatttaagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 2523743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 25142133 - 25142309
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||||| ||||||| || |||| ||||||| ||||||||||| ||||||||||||||    
T  25142133 caaccaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagag 25142232  T
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||||||||| ||||||||||||| ||| |||||||||| ||| ||||||||||| ||||| |||||||||||||||    
T  25142233 aaagttagtcccacccttaccttagatttatcgacgaagaactttaccgctttctgtcctccgactcttctcttctc 25142309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 27484642 - 27484514
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  27484642 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 27484543  T
Q  119 atgctaaactcaatttcagaattatacaa 147  Q
    |||||||||||||||||||||||||||||    
T  27484542 atgctaaactcaatttcagaattatacaa 27484514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 36841151 - 36841268
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||| |||||||    
T  36841151 acatcaattctacacaaattcaacatattttctactctattaacaaccaattacaacttcaaaacctaatttctaaattcccataactacaacctacaac 36841250  T
Q  119 atgctaaactcaatttca 136  Q
    ||| ||||||||||||||    
T  36841251 atgttaaactcaatttca 36841268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 21315528 - 21315423
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||  |  ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  21315528 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgacttttct 21315429  T
Q  232 cttctc 237  Q
    ||||||    
T  21315428 cttctc 21315423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 21335318 - 21335213
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||  |  ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  21335318 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgacttttct 21335219  T
Q  232 cttctc 237  Q
    ||||||    
T  21335218 cttctc 21335213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 357809 - 357933
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| ||||||||||||||||||   | |||||||| |||| || || ||||  || ||||||||| ||||||||||||||||||    
T  357809 aacaaccaattacaacttctaaacctaattcccaaatttcaaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 357908  T
Q  160 gaaagttagtctcacccttacctta 184  Q
    ||||||||||| |||||||||||||    
T  357909 gaaagttagtcccacccttacctta 357933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 27852605 - 27852729
Alignment:
Q  70 tacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttag 168  Q
    ||||||||| ||| ||||||||||||||| || ||| |||| ||||||| || |||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  27852605 tacaacttctaaatctaattcccaaattcccaaaacaacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttag 27852704  T
Q  169 tctcacccttaccttaaattgatcg 193  Q
    || ||||||||||||| ||||||||    
T  27852705 tcccacccttaccttagattgatcg 27852729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 3539766 - 3539899
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| ||||||||||| |||||||  | |||||||| ||||||| || |||| || |||| ||||||||||| ||||| ||||||||    
T  3539766 caaccaattacaacttctaaacctaattctcaaattccaaaaactacaacctacaacttgttaaattcgattttcagaattataccacttaaaattagag 3539865  T
Q  161 aaagttagtctcacccttaccttaaattgatcga 194  Q
    |||||||||| ||||||||||||| ||| |||||    
T  3539866 aaagttagtcccacccttaccttagattcatcga 3539899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 22259974 - 22260144
Alignment:
Q  67 aattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagt 165  Q
    |||||||||||| || ||||||||||||||||  | |||||||| ||||||| || |||| ||||||| |||||| || || ||||||||||| ||||||    
T  22259974 aattacaacttctaagcctaattcccaaattccta-aactacaacctacaacctgttaaattcaattttcagaatcatgca-cttagaattagtgaaagt 22260071  T
Q  166 tagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||| ||| ||||||||| |||||| || || | |||||||||| |||||||| |||||||||| |||||||    
T  22260072 tagtcacactcttaccttagattgattgatcgcaagactctaccgttttctctcttctgactcttttcttctc 22260144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 44072509 - 44072644
Alignment:
Q  84 ctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacct 182  Q
    |||||| |||||||| || |||||||| ||||||| ||||||| ||||||| || ||| ||||| ||||||||||| |||||||||||||||||||||||    
T  44072509 ctaatttccaaattcccaaaactacaacctacaacttgctaaattcaattttcaaaatcataca-cttagaattagtgaaagttagtctcacccttacct 44072607  T
Q  183 taaattgatcga-cgaaggactctaccgctttctctc 218  Q
    ||  |||||||| || | |||||||||||||||||||    
T  44072608 taggttgatcgatcgcaagactctaccgctttctctc 44072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 23968653 - 23968569
Alignment:
Q  154 attagagaaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||| |||| ||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23968653 attaaagaaggttagtctcacccttacctttggattgatcgatgaaggactctaccgctttctctcctctgactcttctcttctc 23968569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 23068505 - 23068369
Alignment:
Q  86 aattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |||| ||||| || |||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||||||||||||||||     
T  23068505 aattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtctcacccttaccttg 23068407  T
Q  185 aattgatcgacgaaggactctaccgctttctctcctct 222  Q
     |||||||||||||||||||||||| ||||||| ||||    
T  23068406 gattgatcgacgaaggactctaccgttttctcttctct 23068369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 22501897 - 22502023
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaatt-cccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaatta 157  Q
    |||||||||| |||||||| || ||||||| |||||||||  | |||||||| | |||||||| ||||  ||||| ||||||||| |  |||||||||||    
T  22501897 aacaaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaatta 22501996  T
Q  158 gagaaagttagtctcacccttacctta 184  Q
    ||||||||||||| |||||||||||||    
T  22501997 gagaaagttagtcccacccttacctta 22502023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 22509831 - 22509957
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaatt-cccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaatta 157  Q
    |||||||||| |||||||| || ||||||| |||||||||  | |||||||| | |||||||| ||||  ||||| ||||||||| |  |||||||||||    
T  22509831 aacaaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaatta 22509930  T
Q  158 gagaaagttagtctcacccttacctta 184  Q
    ||||||||||||| |||||||||||||    
T  22509931 gagaaagttagtcccacccttacctta 22509957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 25046066 - 25046170
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    ||||||||||  |||| |||| |||||||  |||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||| ||||||||    
T  25046066 aacctaattcttaaatcctcaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 25046165  T
Q  180 cctta 184  Q
    |||||    
T  25046166 cctta 25046170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 5986125 - 5986229
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||| ||||| |||| ||||| || ||||||| || ||||  |||||| ||||||||||||||||||||||| |||| ||| ||| ||||||||    
T  5986125 aacctaattctcaaatcctcaaaactataacctacaacttgttaaatccaattttcagaattatacaacttagaattaaagaaggttcgtcccaccctta 5986224  T
Q  180 cctta 184  Q
    |||||    
T  5986225 cctta 5986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 9785489 - 9785628
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    ||||||||||||||||||| ||||| ||  ||||||||  ||||  |||||| |||||| | |  |||||  ||||  ||| ||||||| ||||||||||    
T  9785489 cctaattcccaaattctcaaaactaaaacttacaacatattaaatccaattttcagaatca-atgacttaagattattgaatgttagtcccacccttacc 9785587  T
Q  182 ttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||  ||||| |||||||||||||||||||||||||| ||||    
T  9785588 ttggattgaacgacgaaggactctaccgctttctcttctct 9785628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 25184189 - 25184241
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  25184189 tttcagaattaaaatacttagaattagagaaagttagtctcacccttacctta 25184241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 24884399 - 24884453
Alignment:
Q  61 acaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactac 115  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||||| ||||    
T  24884399 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 24884453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 1283930 - 1283987
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||    
T  1283930 aaagttagtctcactcttacctttggattgatcgacgaaggactctaccgctttctct 1283987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 30344594 - 30344537
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  30344594 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 30344537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 14694296 - 14694388
Alignment:
Q  103 aactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    |||||||| ||||| |||| ||||  |||||| || ||||| |  ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  14694296 aactacaacctacatcatgttaaatccaattttcaaaattaaattacttagaattatagaaagttagtctcacccttaccttagattaatcga 14694388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 21081021 - 21080969
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  21081021 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 21080969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 18388312 - 18388183
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 160  Q
    |||||| || ||||||| || | |||||||||||||| || |||||||| ||||||| || ||||  ||| ||||||||| |||  ||| || ||||  |    
T  18388312 caaccatttgcaacttctaaccataattcccaaattcccaaaactacaacctacaacttgttaaatccaattttcagaatcata-tactcaggattattg 18388214  T
Q  161 aaagttagtctcacccttaccttaaattgat 191  Q
    || ||||||||||||||||||||| ||||||    
T  18388213 aaggttagtctcacccttaccttagattgat 18388183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 18390326 - 18390229
Alignment:
Q  72 caacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactc-aatttcagaattatacaacttagaattagagaaagttagt 169  Q
    ||||||| || |||||||||||||||| || ||||||||  ||| || || |||| || | |||||||||||||  |||||||||||||||||||||||    
T  18390326 caacttctaatcctaattcccaaattcccaaaactacaacatac-acttgttaaattctattttcagaattatatcacttagaattagagaaagttagt 18390229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 19358820 - 19358943
Alignment:
Q  62 caaccaattacaacttcaaaacctaa-ttcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||| || ||||| ||||||||||| || |||||||| | ||||| || |||| |||| ||||||||| |||  ||| |||||||      
T  19358820 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacttgttaaattcaattttcagaatcata-tactcagaattatt 19358918  T
Q  160 gaaagttagtctcacccttacctta 184  Q
     || ||||||| |||||||||||||    
T  19358919 aaaggttagtcccacccttacctta 19358943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 21915624 - 21915672
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||    
T  21915624 tttcagaattaaaatacttagaattagagaaagttagtcacacccttac 21915672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 18358019 - 18357975
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcaccc 176  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||    
T  18358019 tttcagaattaaaatacttagaattagagaaagttagtcccaccc 18357975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 237
Target Start/End: Complemental strand, 14180563 - 14180345
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||     
T  14180563 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacataattcccaaattcccataactacaacctacaat 14180464  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  14180463 atgctaaactcaatttcagaattatacaacttagaattagagaaaattagtcacacccttaccttagattgatcgacgaaggactctaccgctttctctc 14180364  T
Q  219 ctctgactcttctcttctc 237  Q
    |||||||||||||||||||    
T  14180363 ctctgactcttctcttctc 14180345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 20214034 - 20214252
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  20214034 acatcaattgtacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 20214133  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  20214134 atgctaaactcaatttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttagattaatcgacgaaggactctaccgctttctctc 20214233  T
Q  219 ctctgactcttctcttctc 237  Q
    |||||||||||||||||||    
T  20214234 ctctgactcttctcttctc 20214252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 20586239 - 20586457
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| || || ||||| ||||||||||| |||||||    
T  20586239 acatcaattctacacaaattcaacggattttctactctattaacaaccaattgcaacttcaaaccctagtttcctaattcccataactacaacctacaac 20586338  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  20586339 atggtaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaaggactctaccgttttctctc 20586438  T
Q  219 ctctgactcttctcttctc 237  Q
    |||||||||||||||||||    
T  20586439 ctctgactcttctcttctc 20586457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 12465425 - 12465256
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  12465425 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 12465326  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12465325 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 12465256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 32433754 - 32433585
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  32433754 acatcacttctacacaaattcaactaattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcacataactacaacctacaac 32433655  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32433654 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 32433585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 13147637 - 13147471
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  13147637 acatcacttctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 13147538  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  13147537 atgctaaactcaatttcagaattatataacttagaattagagaaagttagtcccacccttaccttaa 13147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 8851324 - 8851155
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  8851324 acatcaattctacacaaattcaacagattttatactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 8851225  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8851224 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 8851155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 11067355 - 11067524
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    ||||||||||| |||| |||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||| |||||||    
T  11067355 acatcacttctccacaaattcaacgaattttctactctattaacaaccaattactacatcaaaacctaattcccaaattcccataactacaacctacaac 11067454  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11067455 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 11067524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 20620173 - 20620339
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  20620173 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaacctacaac 20620272  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  20620273 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaa 20620339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 12372161 - 12372330
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||||    
T  12372161 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctgcaac 12372260  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12372261 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 12372330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 12323095 - 12322926
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  12323095 acatcaattctacacaaattcaacggattttctattctattaacaaccaagtacaacttcaaaacctaattcccaaatttccataactacaacctacaac 12322996  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  12322995 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagttccacccttaccttaaatt 12322926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 46386253 - 46386078
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  46386253 acatcaattctacacaaattcaacggaatttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 46386154  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| |||||||||    
T  46386153 atattaaactcaatttcagaattatacaacttagaattagagaaagttagtcctacccttatcttagattgatcga 46386078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 10277215 - 10277375
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10277215 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10277313  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  10277314 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 10277375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 16999320 - 16999492
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattccc-aaattctcataactacaaactacaa 117  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||  || ||    
T  16999320 acatcaattctacacaaattcaacggattttctactctattaacaaccgattacaacttcaaaacctaattcccaaaattcccataactacaacatataa 16999419  T
Q  118 catgctaaactcaatttcagaattatacaact--tagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  16999420 catgctaaactcaatttcagaattatacaacttatagaattagagaaagttagtctcacccttaccttaaatt 16999492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 12127321 - 12127163
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| || |||||||||| |||    
T  12127321 ttctacacaaattcaacgaattttctactctcttaacaaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaacatgttaa 12127222  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12127221 actcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12127163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 24270112 - 24269942
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| || |||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || |   |||||| |||||    
T  24270112 acatcaattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaacttcacaaattcacaaacaacaac 24270013  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattg 189  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| ||||    
T  24270012 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttaatcccacccttaccttagattg 24269942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 15140143 - 15140318
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    ||||||||||||||||  ||||||||||||||||||| || |||||||| ||||||| || |||| ||||||| |||||| ||||| ||||||||||| |    
T  15140143 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcataca-cttagaattagtg 15140241  T
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    || ||||||||||||| ||||||| ||||||||| | | |||||||||||| |||||||||||||||||||||||||    
T  15140242 aaggttagtctcacccataccttagattgatcgatgtaagactctaccgctctctctcctctgactcttctcttctc 15140318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 62 - 236
Target Start/End: Complemental strand, 13698761 - 13698586
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| || |||||||||||||||  || |||||||| ||| ||||||  |||  |||||| ||||||||  ||||||| ||||| ||    
T  13698761 caaccaattacaacttctaaccctaattcccaaatttccaaaactacaacctaaaacatgtcaaatccaattttcagaattaatcaacttaaaattaaag 13698662  T
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttct 236  Q
    ||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13698661 aaagttagtcctacccttaccttagattgatcgacgaaggactctaccgctttctctcctttgactcttctcttct 13698586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 15623950 - 15624123
Alignment:
Q  63 aaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaa 162  Q
    |||||||||||||| | ||||||||||| ||||||| || |||||||||||||||| |  |||| ||||||||||||| ||||| ||||||||||  |||    
T  15623950 aaccaattacaactcctaaacctaattctcaaattcccaaaactacaaactacaacctattaaattcaatttcagaatcataca-cttagaattattgaa 15624048  T
Q  163 agttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
     ||||||||||||||||||||| ||||||||| | | |||||| |||||||||||||||||| ||||||||||||    
T  15624049 ggttagtctcacccttaccttagattgatcgaagtaagactctgccgctttctctcctctgaatcttctcttctc 15624123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 14219008 - 14218885
Alignment:
Q  72 caacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtc 170  Q
    ||||||| |||||||||||| ||||||||| |||||||| ||||||| || |||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  14219008 caacttctaaacctaattccaaaattctcaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtc 14218909  T
Q  171 tcacccttaccttaaattgatcga 194  Q
    |||||||||||||| |||||||||    
T  14218908 tcacccttaccttagattgatcga 14218885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 3287744 - 3287849
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    ||||||||||||||||| ||  ||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  3287744 tttcagaattatacaacctattattagagaaagctagtctcacccttaccttagattgatcgacggaggactctaccgctttctctcctctgactcttct 3287843  T
Q  232 cttctc 237  Q
    | ||||    
T  3287844 cctctc 3287849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 13132443 - 13132283
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagaga 161  Q
    ||||| ||||||||||| ||||||||||||||||||| || |||||| | ||||||| || |||| |||||||||||||||               ||||    
T  13132443 caaccgattacaacttctaaacctaattcccaaattcccaaaactacgacctacaacttgttaaattcaatttcagaatta---------------gaga 13132359  T
Q  162 aagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    || |||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13132358 aaattagttccacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 13132283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 47974944 - 47974820
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| |||| |||||||||||||  || |||||||| |||| || || ||||  || ||||||||| ||||||||||||||||||    
T  47974944 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 47974845  T
Q  160 gaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||||    
T  47974844 gaaagttagtctcacccttacctta 47974820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 47095452 - 47095557
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||| ||||  |  ||||||||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  47095452 tttcagaattattcaacccattattagagaaagctagtcccacccttaccttagattgattgacgaaggactctaccgctttctctcctctgactcttct 47095551  T
Q  232 cttctc 237  Q
    ||||||    
T  47095552 cttctc 47095557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 48807448 - 48807315
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    |||||||||||||||||   ||| ||||||||||||| || |||||||| ||||||| || |||| || |||| ||||||||||| ||||||||||||||    
T  48807448 caaccaattacaacttctgtaccaaattcccaaattcccaaaactacaatctacaacttgttaaattcgattttcagaattataccacttagaattagag 48807349  T
Q  161 aaagttagtctcacccttaccttaaattgatcga 194  Q
    |||||||||| ||||||||||||| |||||||||    
T  48807348 aaagttagtcccacccttaccttagattgatcga 48807315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 708481 - 708379
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||  |  ||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  708481 tttcagaattatacaacccattattagagaaagctagtcccacccctaccttagattgatcgacgaaggactctaccgctttgtctcctctgactcttct 708382  T
Q  232 ctt 234  Q
    |||    
T  708381 ctt 708379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 25943041 - 25943171
Alignment:
Q  55 ctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaa 154  Q
    |||||||||||||||||| |||||||||||||||| |||||||| || |   |||||| ||||||||||||| |||||||||||||||||||||  | ||    
T  25943041 ctattaacaaccaattacgacttcaaaacctaatttccaaattcacaaattcacaaacaacaacatgctaaattcaatttcagaattatacaacccaaaa 25943140  T
Q  155 ttagagaaagttagtctcacccttaccttaa 185  Q
    ||||||||||||| || |||| |||| ||||    
T  25943141 ttagagaaagttaatcccaccgttacattaa 25943171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 8135359 - 8135231
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagaga 161  Q
    ||||||||||||||||| ||||||||||| |||||||  | |||||||| ||||||| || |||| ||||||||||||| |||| |||||| ||||| ||    
T  8135359 caaccaattacaacttctaaacctaattctcaaattcctaaaactacaacctacaacctgttaaattcaatttcagaatcatac-acttaggattagtga 8135261  T
Q  162 aagttagtctcacccttaccttaaattgat 191  Q
    | ||||||||||||||||||||| ||||||    
T  8135260 aggttagtctcacccttaccttagattgat 8135231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 18874717 - 18874612
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||| ||| ||||    
T  18874717 tttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattgatcgacgaaggactctagcgctttttctcctctaacttttct 18874618  T
Q  232 cttctc 237  Q
    ||||||    
T  18874617 cttctc 18874612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 15095759 - 15095630
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 160  Q
    |||| |||||||||||| ||||||||||||||||||| || |||||||| ||||||| || |||| |||| ||||||||| |||| |||||||||||| |    
T  15095759 caactaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 15095661  T
Q  161 aaagttagtctcacccttaccttaaattgat 191  Q
    || ||||||| ||||||||||||| ||||||    
T  15095660 aaggttagtcccacccttaccttagattgat 15095630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 14259346 - 14259484
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    ||||||||||||||||||| |||||  |||||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||| ||||||||||    
T  14259346 cctaattcccaaattctcaaaacta--aactacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacc 14259443  T
Q  182 ttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||  |||||||||||||||||||||||||||||||| ||||    
T  14259444 ttggattgatcgacgaaggactctaccgctttctcttctct 14259484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 14318094 - 14318177
Alignment:
Q  154 attagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||| |||| ||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14318094 attaaagaaggtttgtcccacccttaccttagattgatcgacgaaggactctaccgctttctcttctctgactcttctcttctc 14318177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 15575701 - 15575595
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctct-gactcttc 230  Q
    |||||||||||||||||  |  ||||||||||| ||||| ||||| ||||||| |||||||||||||  |||||||||||||||||||||| ||||||||    
T  15575701 tttcagaattatacaacccattattagagaaagctagtcccacccctaccttagattgatcgacgaataactctaccgctttctctcctctagactcttc 15575602  T
Q  231 tcttctc 237  Q
    |||||||    
T  15575601 tcttctc 15575595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 33002055 - 33002206
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||||||  ||||||| |||| |||||| |   ||||||||||||||||||| || |||||||||||||||| ||        ||||||||| || |||    
T  33002055 ttctacaccaattcaacagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattccca--------aactacaacctgttaa 33002146  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    |  |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  33002147 atccaatttcagaatcatacaacttagaattagagaaagttagtccgacccttaccttaa 33002206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 44374833 - 44374895
Alignment:
Q  122 ctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44374833 ctaaactcaatttcagaattatacaacttagaattagagaaagttactctcacccttacctta 44374895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 44383698 - 44383760
Alignment:
Q  122 ctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44383698 ctaaactcaatttcagaattatacaacttagaattagagaaagttactctcacccttacctta 44383760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 16078281 - 16078382
Alignment:
Q  84 ctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacct 182  Q
    ||||||||||||||| || |||||||||||||||| || |||| || |||| || |||||||| |||||||||||||||||||||||| |||||||||||    
T  16078281 ctaattcccaaattcccaaaactacaaactacaacttgttaaattcgattttcataattataccacttagaattagagaaagttagtcccacccttacct 16078380  T
Q  183 ta 184  Q
    ||    
T  16078381 ta 16078382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 184
Target Start/End: Complemental strand, 35771554 - 35771441
Alignment:
Q  72 caacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtc 170  Q
    ||||||| ||||||||||||||||||  || |||||||| ||||||| || |||| || |||| ||||||||||  ||||||||||||||||||||||||    
T  35771554 caacttctaaacctaattcccaaatttccaaaactacaacctacaacttgttaaattcgattttcagaattatatcacttagaattagagaaagttagtc 35771455  T
Q  171 tcacccttacctta 184  Q
     |||||||||||||    
T  35771454 ccacccttacctta 35771441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 32302177 - 32302317
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt--cagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||||||| |||| ||||| || |||||||||| ||||  ||||||  |||||||| |  |||||||||||  ||| | ||||| |||||||||    
T  32302177 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaatttttcagaattaaaacacttagaattattgaaggctagtcccacccttac 32302275  T
Q  181 cttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||  |||||||||||||||||||||||||||||||| ||||    
T  32302276 cttggattgatcgacgaaggactctaccgctttctcttctct 32302317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 187
Target Start/End: Complemental strand, 13744736 - 13744655
Alignment:
Q  106 tacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaat 187  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| || ||||||||||||||| || ||||||||| ||||||    
T  13744736 tacaaacaacaacatgctaaacttaatttcagaattatacaacctaaaattagagaaagttaatcccacccttacgttaaat 13744655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 14928389 - 14928256
Alignment:
Q  84 ctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacct 182  Q
    |||||||||||||  ||| ||||| || |||||||||| ||||  |||||| |||||||| | ||||||||||||  ||| ||||||| |||||||||||    
T  14928389 ctaattcccaaatcgtcaaaacta-aatctacaacatgttaaatacaattttcagaattaaagaacttagaattactgaaggttagtcccacccttacct 14928291  T
Q  183 taaattgatcgacgaaggactctaccgctttctct 217  Q
    |  |||||||||||||||||  |||||||||||||    
T  14928290 tggattgatcgacgaaggaccataccgctttctct 14928256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 15351855 - 15351722
Alignment:
Q  84 ctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacct 182  Q
    |||||||||||||  ||| ||||| || |||||||||| ||||  |||||| |||||||| | ||||||||||||  ||| ||||||| |||||||||||    
T  15351855 ctaattcccaaatcgtcaaaacta-aatctacaacatgttaaatacaattttcagaattaaagaacttagaattactgaaggttagtcccacccttacct 15351757  T
Q  183 taaattgatcgacgaaggactctaccgctttctct 217  Q
    |  |||||||||||||||||  |||||||||||||    
T  15351756 tggattgatcgacgaaggaccataccgctttctct 15351722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 184
Target Start/End: Original strand, 4071759 - 4071872
Alignment:
Q  72 caacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtc 170  Q
    ||||||| ||||||||||| ||||| | || |||||||| ||||||| || ||||  |||||| |||| |||||  ||||||||||||||||||||||||    
T  4071759 caacttctaaacctaattctcaaatccccaaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtc 4071858  T
Q  171 tcacccttacctta 184  Q
     |||||||||||||    
T  4071859 ccacccttacctta 4071872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 12754716 - 12754612
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||| |||||||||||||  ||| ||||||| |||| || || ||||  || ||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  12754716 aaacataattcccaaatttccattactacaacctaccacctgttaaatccagtttcagaatcatataacttagaattagagaaagttagtcccaccctta 12754617  T
Q  180 cctta 184  Q
    |||||    
T  12754616 cctta 12754612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 4690715 - 4690609
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt-gatcgacgaaggactctaccgctttctctcctctgactcttc 230  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||  || |||   || | |  |||| |||||||||| ||||||||||||    
T  4690715 tttcagaattatacaacttagaattagagaaagttagtcccacctttaccttaggttagatgatcgcaaggttctatcgctttctcttctctgactcttc 4690616  T
Q  231 tcttctc 237  Q
    |||||||    
T  4690615 tcttctc 4690609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 20488368 - 20488426
Alignment:
Q  164 gttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  20488368 gttagtctcacccttaccttggattgatcgacgaaggactctaccgctttctcttctct 20488426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 12557853 - 12557973
Alignment:
Q  64 accaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttc-agaattatacaacttagaattagagaa 162  Q
    ||||||| ||||||| |||||||||| |||||||| || |||||||| ||||||| || |||| |||||||  ||||| ||||| ||||||||||| |||    
T  12557853 accaatttcaacttctaaacctaatttccaaattcccaaaactacaacctacaacctgttaaattcaatttttagaatcataca-cttagaattagtgaa 12557951  T
Q  163 agttagtctcacccttacctta 184  Q
     ||||||||||| |||| ||||    
T  12557952 ggttagtctcactcttatctta 12557973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 15289052 - 15289157
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctt 178  Q
    ||||||||||| ||||| |||| |||||||| ||||||| || ||||  |||||| |||| |||||  |||||||||||||||||||| ||| |||||||    
T  15289052 aaacctaattctcaaatcctcaaaactacaacctacaacttgttaaatccaattttcagagttataatacttagaattagagaaagttggtcccaccctt 15289151  T
Q  179 acctta 184  Q
    ||||||    
T  15289152 acctta 15289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 18426343 - 18426405
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  18426343 aaagttagtctcacccttacctttggattgatcgacgaaggactctaccgctttctcttctct 18426405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 10658932 - 10658851
Alignment:
Q  103 aactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||  |||||| ||| ||||  |||||||||||| |||||||||||||||| |||| ||||||| |||||||||||||    
T  10658932 aactacatcctacaaaatgttaaatccaatttcagaatcatacaacttagaattaaagaaggttagtcccacccttacctta 10658851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 45169609 - 45169552
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  45169609 aaagttagtctcacccttacctttggattgatcgacgaaggactctaccgctttctct 45169552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 18955330 - 18955382
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  18955330 tttcagaattataacacttagaattagagaaagttagtctcacctttacctta 18955382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 16580649 - 16580707
Alignment:
Q  164 gttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||  |||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  16580649 gttagtccaacccttaccttggattgatcgacgaaggactctaccgctttctcttctct 16580707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 36704642 - 36704561
Alignment:
Q  113 tacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    ||||||||| ||||   ||||||||||||| |||||||| ||||| |||| ||||||| ||||||||||||| ||| |||||    
T  36704642 tacaacatgttaaatcaaatttcagaattacacaacttaaaattaaagaaggttagtcccacccttaccttagattaatcga 36704561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 18990847 - 18990899
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||  ||||||||||||||||||||||| ||||| ||||||||    
T  18990847 tttcagaattataacacttagaattagagaaagttagtatcacctttacctta 18990899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 19283056 - 19283112
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||  |   ||||||||||||||||||||||||||||||||||    
T  19283056 tttcagaattatacaacccattcttagagaaagttagtctcacccttaccttaaatt 19283112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 29052234 - 29052182
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  29052234 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 29052182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 32160252 - 32160200
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  ||||||||||||||||||||||||| ||||||||||||    
T  32160252 tttcagaattaaattacttagaattagagaaagttagtcttacccttacctta 32160200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 43276796 - 43276740
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||  |  ||||||||||||||||| |||||||||||||||||    
T  43276796 tttcagaattatacaacccattattagagaaagttagtcccacccttaccttaaatt 43276740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 20252234 - 20252171
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgac 195  Q
    |||||||||||||||||| |  ||||||||||| |||||  |||||||||||| ||||||||||    
T  20252234 tttcagaattatacaactcattattagagaaagctagtcctacccttaccttagattgatcgac 20252171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 20484926 - 20485060
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    ||||| ||||||||||||| ||||| ||  ||||||||  |||| ||||||| |||||| | |  |||||  ||||  ||| ||||||| |||| ||| |    
T  20484926 cctaaatcccaaattctcaaaactaaaacttacaacatattaaattcaattttcagaatca-atgacttaagattattgaatgttagtcccacctttatc 20485024  T
Q  182 ttaaattgatcgacgaaggactctaccgctttctct 217  Q
    ||  ||||||||||||||||||||||||||||||||    
T  20485025 ttggattgatcgacgaaggactctaccgctttctct 20485060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 18074693 - 18074643
Alignment:
Q  138 aattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||| ||||||||||||||||||||| || ||| |||||||||||||    
T  18074693 aattataccacttagaattagagaaagttaatcccactcttaccttaaatt 18074643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 43745656 - 43745762
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt-gatcgacgaaggactctaccgctttctctcctctgactcttc 230  Q
    ||||| |||||||||||| |  ||||||||||| ||||| |||||||||||||  || |||   || | |  ||||||||||||||| ||||||||||||    
T  43745656 tttcataattatacaactcattattagagaaagctagtcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttc 43745755  T
Q  231 tcttctc 237  Q
    |||||||    
T  43745756 tcttctc 43745762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 11054642 - 11054765
Alignment:
Q  62 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||  || ||||||| ||||||||| || || ||||| ||||||| || |||| |||| ||||||||| | || ||||||||| |      
T  11054642 caaccaattacaacttataaccctaatttcccaaattcccaaaattacaacctacaacctgttaaattcaattttcagaatcaaac-acttagaatcatt 11054740  T
Q  160 gaaagttagtctcacccttacctta 184  Q
    ||| ||||||| |||||||||||||    
T  11054741 gaaggttagtcccacccttacctta 11054765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 16250274 - 16250222
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||| |||||||||||| |  ||||||||||||||||| |||||||||||||    
T  16250274 tttcaaaattatacaactcattattagagaaagttagtcccacccttacctta 16250222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 16550057 - 16550005
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| || ||||||||||    
T  16550057 tttcagaattaaaatacttagaattagagaaagttagtcccaaccttacctta 16550005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 16615605 - 16615657
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| || ||||||||||    
T  16615605 tttcagaattaaaatacttagaattagagaaagttagtcccaaccttacctta 16615657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 19195611 - 19195663
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||| |  ||||||||||| ||||| |||||||||||||    
T  19195611 tttcagaattatacaactcattattagagaaagctagtcccacccttacctta 19195663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 41284963 - 41285043
Alignment:
Q  64 accaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattata 144  Q
    |||||||| |||||| |||||||||||||||||||  | |||||||| ||| ||| |  ||||  ||||||||||||||||    
T  41284963 accaattataacttctaaacctaattcccaaattcctaaaactacaacctataacctattaaatccaatttcagaattata 41285043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 184
Target Start/End: Complemental strand, 13315152 - 13315082
Alignment:
Q  114 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||| ||||| |  ||||||||| |||||||  |  ||||||||||| |||||||||||||||||||    
T  13315152 acaacatgttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttacctta 13315082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 8488142 - 8488094
Alignment:
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||  |  ||||||||||||||||| |||||||||||||    
T  8488142 agaattatacaacccattattagagaaagttagtcccacccttacctta 8488094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 8513801 - 8513753
Alignment:
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||  |  ||||||||||||||||| |||||||||||||    
T  8513801 agaattatacaacccattattagagaaagttagtcccacccttacctta 8513753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 38299748 - 38299800
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||    
T  38299748 tttcagaattatacaacccattattagagaaagctagtcccacccttacctta 38299800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 405 - 623
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  405 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 504  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||| ||||    
T  505 atgctaaactcaatttcagaatgatacaacttagaattagagaaagttagtctcacccttaccttagattgatcgacgaataactctaccgctttatctc 604  T
Q  219 ctctgactcttctcttctc 237  Q
    || ||||||||||||||||    
T  605 ctatgactcttctcttctc 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 179; Significance: 1e-96; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 237
Target Start/End: Complemental strand, 15890877 - 15890659
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| |||||||    
T  15890877 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaac 15890778  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  15890777 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctc 15890678  T
Q  219 ctctgactcttctcttctc 237  Q
    |||| ||||||||||||||    
T  15890677 ctctaactcttctcttctc 15890659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 7827859 - 7828028
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  7827859 acatcaattctacacaaattcaaccgattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 7827958  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7827959 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 7828028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 19655396 - 19655227
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  19655396 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 19655297  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19655296 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 19655227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 23150452 - 23150283
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  23150452 acatcaattctacacaaattcaacaaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 23150353  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23150352 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 23150283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 27125642 - 27125473
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  27125642 acatcacttctatacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaagtcccaaattcccataactacaacctacaac 27125543  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27125542 atgctaatctcaattttagacttatacaacttagaattagagaaagttagtctcacccttaccttaaatt 27125473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 18703451 - 18703624
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaatt----acaacttcaaaacctaattcccaaattctcataactacaaacta 114  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||    |||||||||||| ||||||||||||||| ||||||||||| |||    
T  18703451 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18703550  T
Q  115 caacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  18703551 caacattctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaaatt 18703624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 18709386 - 18709559
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaatt----acaacttcaaaacctaattcccaaattctcataactacaaacta 114  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||    |||||||||||| ||||||||||||||| ||||||||||| |||    
T  18709386 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18709485  T
Q  115 caacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  18709486 caacattctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaaatt 18709559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 27330129 - 27329981
Alignment:
Q  36 attcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttc 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||||||    
T  27330129 attcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatttc 27330030  T
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  27330029 agaattatacaacctagaattagagaaagttagtcacactcttacctta 27329981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 27390869 - 27390721
Alignment:
Q  36 attcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttc 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||||||    
T  27390869 attcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatttc 27390770  T
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  27390769 agaattatacaacctagaattagagaaagttagtcacactcttacctta 27390721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 18928614 - 18928786
Alignment:
Q  66 caattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaag 164  Q
    ||||||||||||| |||||||||| |||||||| || |||| ||| ||||||| || |||| ||||||| ||||||||||| ||||||||||||||||||    
T  18928614 caattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaag 18928713  T
Q  165 ttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||  |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  18928714 ttagtcctacccttaccttagattcatcgacgaaggactctaccgctatctctcctctgactcttctcttctc 18928786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 84 - 183
Target Start/End: Original strand, 24267801 - 24267900
Alignment:
Q  84 ctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctt 183  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24267801 ctaattctcaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 37 - 189
Target Start/End: Original strand, 19235029 - 19235180
Alignment:
Q  37 ttcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttca 136  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| || |   |||||| ||||||| ||||| |||||||||    
T  19235029 ttcaatggattttctactttattaacaaccaattacgacttcaaaacctaat-cccaaattcacaaattcacaaacaacaacatcctaaaatcaatttca 19235127  T
Q  137 gaattatacaacttagaattagagaaagttagtctcacccttaccttaaattg 189  Q
    |||||||||||| || ||||||||||||||| || |||||||| |||| ||||    
T  19235128 gaattatacaacctaaaattagagaaagttaatcccacccttaacttagattg 19235180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 28948468 - 28948681
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt-ctcataactacaaactacaacatgcta 124  Q
    ||||||||  |||||||  |||||||||| |   ||||||||||||||||||| |||||||||||||||||| || | | ||||||  ||| || || ||    
T  28948468 ttctacaccaattcaacatattttctactattaaaacaaccaattacaacttctaaacctaattcccaaatttctaaaacctacaacttaccacttgtta 28948567  T
Q  125 aactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctctg 223  Q
    ||  || ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| || || | |  |||| |||||||| | |||||    
T  28948568 aatccagtttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttagattgattgatcgcaaggttctatcgctttcttttctctg 28948667  T
Q  224 actcttctcttctc 237  Q
     |||||||||||||    
T  28948668 gctcttctcttctc 28948681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 30673550 - 30673397
Alignment:
Q  29 tacacagattcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaac 127  Q
    |||||| |||||| | |||||||||||||||||||||||| |||| | |||||||||||||||| ||||||        |||||| ||| ||||||||||    
T  30673550 tacacaaattcaatgaattttctactctattaacaaccaaattactaattcaaaacctaattccaaaattc--------acaaacaacatcatgctaaac 30673459  T
Q  128 tcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattg 189  Q
    ||||||||| ||||||||||| || ||||||||||||||| || ||||||||||||| ||||    
T  30673458 tcaatttcaaaattatacaacctaaaattagagaaagttaatcccacccttaccttagattg 30673397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 191
Target Start/End: Original strand, 18585733 - 18585864
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| |||||||||||| |||||  || |||||||| |||| || || ||||  || ||||||||| ||||||||||||||||||    
T  18585733 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 18585832  T
Q  160 gaaagttagtctcacccttaccttaaattgat 191  Q
    ||||||||||| |||||||||| || ||||||    
T  18585833 gaaagttagtcccacccttaccatatattgat 18585864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 32259867 - 32259950
Alignment:
Q  154 attagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||| |||| ||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32259867 attaaagaaggttagtcacacccttacctaagattgatcgacgaaggactctaccgctttctctcctctaactcttctcttctc 32259950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 19772767 - 19772628
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    |||||||||||||| |||| ||||| || |||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||| ||||||||||    
T  19772767 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacc 19772669  T
Q  182 ttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||  |||||||||||||||||||||||||||||||| ||||    
T  19772668 ttggattgatcgacgaaggactctaccgctttctcttctct 19772628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 19167992 - 19167848
Alignment:
Q  29 tacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaact 128  Q
    |||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||                ||||| |||||||||||||||    
T  19167992 tacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcc----------------caaacaacaacatgctaaact 19167909  T
Q  129 caatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattg 189  Q
    |||| ||||||||||||||| ||  |||||| ||||||| |  ||||||||||||| ||||    
T  19167908 caatatcagaattatacaacctaatattagacaaagttaattccacccttaccttagattg 19167848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 27572188 - 27572121
Alignment:
Q  118 catgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    |||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27572188 catgttaaattcaatttcagaattatacgacttagaattagagaaagttagtctcacccttaccttaa 27572121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 15998880 - 15998941
Alignment:
Q  123 taaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15998880 taaactctttttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 15998941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 19401028 - 19401147
Alignment:
Q  66 caattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagagaaag 164  Q
    ||||||||||||  ||||||||||| ||||||| || |||||||| ||||||| || |||| |||| ||||||||| |||| |||||||||||| ||| |    
T  19401028 caattacaacttataaacctaattctcaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaagg 19401126  T
Q  165 ttagtctcacccttaccttaa 185  Q
    |||||| ||||||||||||||    
T  19401127 ttagtcccacccttaccttaa 19401147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 22806694 - 22806824
Alignment:
Q  87 attcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    |||||||||| |||| ||||| || |||||||||| ||||   ||||| |||||||| |  |||||||||||  ||| | ||||| ||||||||||||      
T  22806694 attcccaaatcctcaaaacta-aacctacaacatgttaaatataattttcagaattaaaacacttagaattattgaaggctagtcccacccttaccttgg 22806792  T
Q  186 attgatcgacgaaggactctaccgctttctct 217  Q
    ||||||||||||||||||||||||||||||||    
T  22806793 attgatcgacgaaggactctaccgctttctct 22806824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 23501601 - 23501734
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataa-ctacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattaga 159  Q
    |||| |||||||||||| ||||||||||||||||||  || || |||||| ||||||| || |||| ||| ||| |||||||| |||  |||||||||      
T  23501601 caacaaattacaacttctaaacctaattcccaaatttccaaaaactacaacctacaacttgttaaattcagttttcagaattaaacat-ttagaattatt 23501699  T
Q  160 gaaagttagtctcacccttaccttaaattgatcga 194  Q
    ||| ||||||||||||||||||||| |||||||||    
T  23501700 gaaggttagtctcacccttaccttagattgatcga 23501734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 27324735 - 27324681
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttct 215  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  27324735 aaagttagtctcacccttaccttggattgatcgacgaaggactctaccgctttct 27324681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 15704601 - 15704526
Alignment:
Q  147 acttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||||||  ||| | ||||| ||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  15704601 acttagaattattgaaggctagtcccacccttaccttggattgatcgacgaaggactctaccgctttctcttctct 15704526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 2077232 - 2077290
Alignment:
Q  164 gttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  2077232 gttagtcccacccttaccttggattgatcgacgaaggactctaccgctttctcttctct 2077290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 31477382 - 31477320
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  31477382 aaagttagtctcacccttacctttggattgatcgacgaaggactctaccgctttctcttctct 31477320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 16760798 - 16760855
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  16760798 aaagttagtctcacccttacctttggattgatcgacgaaggactctaccgctttctct 16760855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 31732009 - 31731904
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctt 178  Q
    ||||||||||| ||||| | || |||||||| ||||||| ||  |||  |||||| ||||||||||  |||||||||| ||||||||||||| |||||||    
T  31732009 aaacctaattctcaaatccccaaaactacaacctacaacttgtcaaatccaattttcagaattataacacttagaattggagaaagttagtcccaccctt 31731910  T
Q  179 acctta 184  Q
    ||||||    
T  31731909 acctta 31731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 12041672 - 12041620
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  12041672 tttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 12041620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 16624833 - 16624889
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||    
T  16624833 aaagttagtctcacccttaccttggattgatcgacgaagaactataccgctttctct 16624889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 22949648 - 22949705
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  22949648 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 22949705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 22953604 - 22953661
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  22953604 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 22953661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 23872092 - 23872149
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  23872092 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 23872149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 23876048 - 23876105
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  23876048 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 23876105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 24550249 - 24550168
Alignment:
Q  103 aactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||  |||||||||| ||||  |||||||||||||| |||||||| ||||| ||||  |||||| |||||||||||||    
T  24550249 aactacatcctacaacatgttaaatccaatttcagaattacacaacttacaattaaagaagtttagtcccacccttacctta 24550168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 15900706 - 15900654
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||| |||||||||||||||||    
T  15900706 tttcagaattaaaatacttagaattagagaaagttggtctcacccttacctta 15900654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 15173505 - 15173453
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||| ||||||||    
T  15173505 tttcagaattaaaatacttagaattagagaaagttagtcccaccattacctta 15173453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 29625191 - 29625231
Alignment:
Q  140 ttatacaacttagaattagagaaagttagtctcacccttac 180  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  29625191 ttatacaacgtagaattagagaaagttagtcccacccttac 29625231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 18259328 - 18259262
Alignment:
Q  29 tacacagattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaa 94  Q
    |||||| |||| | |||||||||| || ||||||||| |||||||| | ||||||||||||||||||    
T  18259328 tacacaaattctatggattttctattcaattaacaactaattacaattctcaaaacctaattcccaa 18259262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 23431420 - 23431386
Alignment:
Q  203 tctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||| |||||||||||||||||||    
T  23431420 tctaccgctttctcttctctgactcttctcttctc 23431386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 19825538 - 19825486
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||| ||||  |  ||||||||||| |||||||||||||||||||    
T  19825538 tttcagaattatgcaacccattattagagaaagctagtctcacccttacctta 19825486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 23658089 - 23658141
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||||||| ||  ||||| ||||| ||||| |||||||||||||    
T  23658089 tttcagaattatacaacctattattagggaaagctagtcccacccttacctta 23658141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 29045271 - 29045323
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  29045271 tttcaaaattatacaacccattattagagaaagctagtctcacccttacctta 29045323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 1e-96; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 15115109 - 15115327
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||    
T  15115109 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaaaataattcccaaattcccataactacaacctacaac 15115208  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  15115209 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacaaaggactctaccgctttctctc 15115308  T
Q  219 ctctgactcttctcttctc 237  Q
    |||||||||||||||||||    
T  15115309 ctctgactcttctcttctc 15115327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 37019564 - 37019775
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||| |||    
T  37019564 ttctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgttaa 37019663  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgac 225  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37019664 actcaatttcagaattatacaacttaaaattagagaaagttagtcacacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgac 37019763  T
Q  226 tcttctcttctc 237  Q
    ||||||||||||    
T  37019764 tcttctcttctc 37019775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 25091540 - 25091709
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  25091540 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 25091639  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25091640 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 25091709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 11425825 - 11425998
Alignment:
Q  14 gatggacatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaact 113  Q
    |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||    
T  11425825 gatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaatttcaaaacctaattcccaaattcccataactacaacct 11425924  T
Q  114 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaat 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11425925 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaat 11425998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 53630639 - 53630470
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  53630639 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 53630540  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  53630539 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 53630470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 10356601 - 10356432
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  10356601 acatcaattctacacaaattcaacggattttctactctattaactaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 10356502  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  10356501 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaaccttaccttaaatt 10356432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 16998412 - 16998581
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| | ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  16998412 acatcaatactacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 16998511  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16998512 atgctaaactcaatttcataattatacaacttagaattagagaaagttagtctcactcttaccttaaatt 16998581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 19610211 - 19610380
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| ||||||||||| |||||||    
T  19610211 acatcaattctacacaaatttaacggattttctactctattaacaaccaattacaacgtcaaaacttaattctcaaattcccataactacaacctacaac 19610310  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19610311 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttagtctcacccttaccttaaatt 19610380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 42875684 - 42875853
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  42875684 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctatttcccaaattcccataactacaacctacaac 42875783  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||    
T  42875784 atgctaaactcaatttcagaattatacaacttagaattatataaagttagtcccacccttaccttaaatt 42875853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 46001695 - 46001535
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  46001695 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 46001597  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46001596 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtctcacccttac 46001535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 6633701 - 6633541
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  6633701 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6633603  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  6633602 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 6633541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 9924085 - 9924259
Alignment:
Q  64 accaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaa 162  Q
    ||||||||||||||| |||||||||| |||||||| || |||| ||| ||||||| || |||| ||||||| ||||||||||| ||||||||||||||||    
T  9924085 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaa 9924184  T
Q  163 agttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9924185 agttagtctcacccttaccttagattgatcgacgaaggactctaccgctttctctcatctgactcttctcttctc 9924259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 14549695 - 14549865
Alignment:
Q  67 aattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagtt 166  Q
    |||||||||||| ||||||||||||||||||  || |||||||| |||| || || ||||  || ||||||||  |||||||||||||||||||||||||    
T  14549695 aattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaaacatacaacttagaattagagaaagtt 14549794  T
Q  167 agtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14549795 agtctcacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttttcttctc 14549865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 11478772 - 11478600
Alignment:
Q  66 caattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaag 164  Q
    ||||||||| ||| |||||||||| |||||||| || |||| ||| ||||||| || |||| ||||||| ||||||||||| |||||||||||||| |||    
T  11478772 caattacaagttctaaacctaatttccaaattcccaaaacttcaatctacaacttgttaaattcaattttcagaattataccacttagaattagaggaag 11478673  T
Q  165 ttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11478672 ttagtctcacccttaccttagattgatcgacgaaggactctaccgctttctctcatctgactcttctcttctc 11478600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 71 - 237
Target Start/End: Complemental strand, 19434672 - 19434506
Alignment:
Q  71 acaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 170  Q
    |||||||| |||| |||||||||||||   | |||||||| |||| || || ||||  || ||||||||| |||||||||||||||||||||||||||||    
T  19434672 acaacttctaaacttaattcccaaatttcaaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtc 19434573  T
Q  171 tcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
     ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19434572 ccacccttaccttagattgatcgacgaaggactataccgctttctctcctctgactcttctcttctc 19434506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 62 - 234
Target Start/End: Complemental strand, 9870568 - 9870394
Alignment:
Q  62 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattaga 159  Q
    ||||||||||||||||| || ||||||| ||||||||| || |||||||| ||||| ||||  |||  |||||| |||||||||||||||||||||||      
T  9870568 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacatcatgtcaaatccaattttcagaattatacaacttagaattatg 9870469  T
Q  160 gaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctctt 234  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  9870468 gaaagttagtcccacccttagcttagattgatcgacgaaggactctaccactttctctcctatgactcttctctt 9870394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 14631135 - 14631240
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14631135 tttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttct 14631234  T
Q  232 cttctc 237  Q
    ||||||    
T  14631235 cttctc 14631240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 16296938 - 16297043
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||| |  ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16296938 tttcagaattatacaactcattattagagaaagctagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttct 16297037  T
Q  232 cttctc 237  Q
    ||||||    
T  16297038 cttctc 16297043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 21144 - 21248
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||| ||||| |||| |||||||| |||||||||| |||| |||||| |||||||||||||||||||||||| |||| |||||||||| |||||    
T  21144 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatcctta 21243  T
Q  180 cctta 184  Q
    |||||    
T  21244 cctta 21248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 2424439 - 2424333
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt-gatcgacgaaggactctaccgctttctctcctctgactcttc 230  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  || |||   || | |  |||| |||||||||| ||||||||||||    
T  2424439 tttcaaaattatacaacttagaattagagaaagttagtctcacccttaccttaggttagatgatcgcaaggttctaacgctttctcttctctgactcttc 2424340  T
Q  231 tcttctc 237  Q
    |||||||    
T  2424339 tcttctc 2424333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 26921762 - 26921708
Alignment:
Q  43 ggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26921762 ggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt 26921708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 15613061 - 15613142
Alignment:
Q  103 aactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||  |||||||||| ||||  ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  15613061 aactacatcctacaacatgttaaatccaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 15613142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 15011571 - 15011432
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    |||||||||||||| |||| ||||| || |||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | |||||  ||||||||     
T  15011571 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcctacccttact 15011473  T
Q  182 ttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||  |||||||||||||||||||||||||||||||| ||||    
T  15011472 ttggattgatcgacgaaggactctaccgctttctcttctct 15011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 51993532 - 51993613
Alignment:
Q  103 aactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||  |||||||||| ||||  |||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||    
T  51993532 aactacatcctacaacatgttaaatccaatttcagaattacacaacttagaattaaagaaggttagtcccacccttacctta 51993613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 10713356 - 10713418
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  10713356 aaagttagtctcacccttacctttggattgatcgacgaaggactctaccgctttctcttctct 10713418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 10927126 - 10927188
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctctcctct 222  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  10927126 aaagttagtctcacccttacctttggattgatcgacgaaggactctaccgctttctcttctct 10927188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 35811428 - 35811375
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  35811428 tttcaaaattataccacttagaattagagaaagttagtcccacccttaccttaa 35811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 10694297 - 10694241
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||    
T  10694297 tttcagaattaaattacttagaattagagaaatttagtctcacccttaccttaaatt 10694241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 10908063 - 10908007
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||    
T  10908063 tttcagaattaaattacttagaattagagaaatttagtctcacccttaccttaaatt 10908007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 15225581 - 15225637
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||    
T  15225581 aaagttagtctcacccttaccttggattgatcgacgaagaactataccgctttctct 15225637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 50161463 - 50161550
Alignment:
Q  150 tagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||||||| |||| |||||||  ||||||||||||  ||  |||||| |||||||||||||||| | ||||||||||||||| |||||    
T  50161463 tagaattaaagaatgttagtccaacccttaccttaggttagtcgacggaggactctaccgctttatatcctctgactcttcttttctc 50161550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 18023041 - 18023099
Alignment:
Q  164 gttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||||||| ||||||||||||  ||||||| |||||||||||||||||||||||| ||||    
T  18023041 gttagtcccacccttaccttggattgatcaacgaaggactctaccgctttctcttctct 18023099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 14186955 - 14187010
Alignment:
Q  128 tcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||    
T  14186955 tcaatttcagaatcataca-cttagaattagagaaagttactcccacccttacctta 14187010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 15008963 - 15009015
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  15008963 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 15009015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 21062593 - 21062693
Alignment:
Q  85 taattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacctt 183  Q
    |||||| ||||| |||| |||||||| |||| || || ||||  |||||| || | |||||  |||||||||||||||||||||||| ||||||||||||    
T  21062593 taattctcaaatcctcaaaactacaacctaccacttgttaaatccaattttcatagttataacacttagaattagagaaagttagtcccacccttacctt 21062692  T
Q  184 a 184  Q
    |    
T  21062693 a 21062693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 32466244 - 32466194
Alignment:
Q  134 tcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||| |||||||||||||| ||||  ||||||||||||||||||||    
T  32466244 tcagaattacacaacttagaattaaagaagattagtctcacccttacctta 32466194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 12488214 - 12488271
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   ||||||||| |||||||||||| |||||||||    
T  12488214 aaagttagtctcacccttacctttggattgatcgaagaaggactctactgctttctct 12488271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 14953733 - 14953676
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||| ||| |||||||||    
T  14953733 aaagttagtctcacccttacctttggattgatcgacgaaggactatactgctttctct 14953676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 25690410 - 25690467
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   ||||||| |||||||||||||| |||||||||    
T  25690410 aaagttagtctcacccttacctttggattgatcaacgaaggactctactgctttctct 25690467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 27028642 - 27028754
Alignment:
Q  29 tacacagattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaaattctcataactacaaactacaacatgctaaac 127  Q
    |||||| |||| | |||||||||| || ||||||||| |||| ||| | |||||||||||||||||| | |||| || | | ||| |||||||| |||||    
T  27028642 tacacaaattctatggattttctattcaattaacaactaattgcaattctcaaaacctaattcccaattcctca-aattcccaaccacaacatgttaaac 27028740  T
Q  128 tcaatttcagaatt 141  Q
    ||||||| ||||||    
T  27028741 tcaattttagaatt 27028754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 12424342 - 12424286
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||||||    
T  12424342 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaatt 12424286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 33186903 - 33186959
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||| |||||||||||    
T  33186903 tttcagaattatacaacccattattagagaaagctagtctcacccctaccttaaatt 33186959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 40620532 - 40620584
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  ||||||||||||||||||||| || |||||||||||||    
T  40620532 tttcagaattaaaatacttagaattagagaaagttattcccacccttacctta 40620584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 9638939 - 9639062
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac-atgctaaactcaatttcagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| ||||||||||||||||   ||| || ||  ||| || || | | ||||| |  ||||||||||| |||||| |  |||||||    
T  9638939 caaccaattacaacttctaaacctaattcccaaaacatcaaaattatcaacaactacaaggttaaaccctttttcagaattacacaactcattattagag 9639038  T
Q  161 aaagttagtctcacccttacctta 184  Q
    |||| ||||| |||||||||||||    
T  9639039 aaagctagtcccacccttacctta 9639062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 15239868 - 15239810
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattga 190  Q
    ||||||| |||||||| | |  ||||||||||| ||||||||||||||||||| |||||    
T  15239868 tttcagatttatacaattcattattagagaaagctagtctcacccttaccttagattga 15239810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 13847205 - 13847253
Alignment:
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||  |  ||||||||||| |||||||||||||||||||    
T  13847205 agaattatacaacccattattagagaaagctagtctcacccttacctta 13847253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 25513851 - 25513903
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||| |  ||||||||||| ||||| |||| ||||||||    
T  25513851 tttcagaattatacaactcattattagagaaagctagtcccaccattacctta 25513903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 26921487 - 26921455
Alignment:
Q  205 taccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||| |||||||||||||||||||    
T  26921487 taccgctttctcttctctgactcttctcttctc 26921455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 179; Significance: 1e-96; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 42912936 - 42913154
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||| |||||||    
T  42912936 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcctaaattcccacaactacaacctacaac 42913035  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42913036 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattgatcgacgaaggactctaccgctttctctc 42913135  T
Q  219 ctctgactcttctcttctc 237  Q
    |||  ||||||||||||||    
T  42913136 ctccaactcttctcttctc 42913154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 19676598 - 19676767
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19676598 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 19676697  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19676698 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 19676767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 21046214 - 21046045
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  21046214 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 21046115  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21046114 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 21046045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 16058478 - 16058314
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||| |||||||    
T  16058478 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaa-cctaattcccaaatttccataactacaacctacaac 16058380  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  16058379 atgctaaactcaatttcagaattatacaacttagaattagagaaatttagtcccacccttacctta 16058314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 20633799 - 20633627
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataa---ctacaaactac 115  Q
    |||||| ||||||||| |||||||  ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||   ||| || ||||    
T  20633799 acatcaattctacacaaattcaacttattttttattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataataactataacctac 20633700  T
Q  116 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  20633699 aacatgctaaactcaatttcagaattatacaacttagaattagagcaagttagtcccacccttatcttaaatt 20633627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 7052046 - 7051869
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||| ||| ||||||||||||||||||   | ||||| || |||| || || ||||  || ||||||||| ||||||||||||||||||    
T  7052046 aacaaccaattacaatttctaaacctaattcccaaatttctaaaactaaaatctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 7051947  T
Q  160 gaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7051946 gaaagttagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctcctccgactcttctcttctc 7051869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 4595994 - 4595800
Alignment:
Q  36 attcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt- 134  Q
    ||||| |||||| ||||||||   | ||||||||||||||||| ||| ||||||||||||        ||||||| ||||||| || |||| || ||||     
T  4595994 attcatcggattatctactcttaaatcaaccaattacaacttctaaatctaattcccaaa--------actacaacctacaacttgttaaattcgatttt 4595903  T
Q  135 cagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctctt 234  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  4595902 cagaattatacctcttagaattagagaaagttagtctcacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactattctatt 4595803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 51324398 - 51324610
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||||||  ||||||  ||||||||||| |   ||||||||||||||||||  ||||||||||||||| ||| || |||||||| |||| || || |||    
T  51324398 ttctacaccaattcaatagattttctactattaaaacaaccaattacaacttttaaacctaattcccaatttcccaaaactacaacctaccacctgttaa 51324497  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctctga 224  Q
    |  || ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| || || | |  ||||||||||||||| |||||     
T  51324498 atccagtttcagaatcatacaacttagaattagggaaagttagtctcacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctgg 51324597  T
Q  225 ctcttctcttctc 237  Q
     ||||||||||||    
T  51324598 ttcttctcttctc 51324610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 50544872 - 50544977
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  50544872 tttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactgttct 50544971  T
Q  232 cttctc 237  Q
    ||||||    
T  50544972 cttctc 50544977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 13302849 - 13302964
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctt 178  Q
    ||||||||||||||||||| || |||||||| ||||||| || |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  13302849 aaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtctcaccctt 13302948  T
Q  179 accttaaattgatcga 194  Q
    |||||| |||||||||    
T  13302949 accttagattgatcga 13302964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 24723475 - 24723344
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| |||| |||||| ||||||  || |||||||| |||| || || |||| ||| ||||||||| ||||||||||||||||||    
T  24723475 aacaaccaattacaacttctaaacataattctcaaatttccaaaactacaatctaccacctgttaaattcagtttcagaatcatacaacttagaattaga 24723376  T
Q  160 gaaagttagtctcacccttaccttaaattgat 191  Q
    ||||||||||| ||||||||||||| ||||||    
T  24723375 gaaagttagtcccacccttaccttagattgat 24723344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 21168831 - 21168990
Alignment:
Q  29 tacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaact 128  Q
    |||||| |||||| ||||||||||||||||||| ||| ||  || | |||||||||| |||||||||||| || |   |||||| |||||||||||||||    
T  21168831 tacacaaattcaatggattttctactctattaaaaacaaaa-actaattcaaaaccttattcccaaattcacaaattcacaaacaacaacatgctaaact 21168929  T
Q  129 caatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattg 189  Q
    |||||| ||||||||||||| || ||||||||||||||| |  ||||||||||||| ||||    
T  21168930 caattttagaattatacaacctaaaattagagaaagttaattccacccttaccttagattg 21168990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 42697732 - 42697836
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||| ||||| |||| |||||||| |||||||||| ||||  ||||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  42697732 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtctcaccctta 42697831  T
Q  180 cctta 184  Q
    |||||    
T  42697832 cctta 42697836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 189
Target Start/End: Complemental strand, 7320716 - 7320589
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 160  Q
    |||||||||||||| || |||| |||||||||||||| || |||||||| ||||||| || |||| |||| ||||||||| |||| |||||||||||| |    
T  7320716 caaccaattacaacatctaaacataattcccaaattcccaaaactacaatctacaacctgttaaattcaattttcagaataatac-acttagaattagtg 7320618  T
Q  161 aaagttagtctcacccttaccttaaattg 189  Q
     | ||||||| ||||||||||||| ||||    
T  7320617 taggttagtcccacccttaccttagattg 7320589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 12327795 - 12327743
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12327795 tttcagaatcatacaacttagaattagagaaagttagtctcacccttacctta 12327743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 21239130 - 21239039
Alignment:
Q  103 aactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    |||||||| |||| || || ||||  || ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||||||    
T  21239130 aactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccacccataccttagattgatcga 21239039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 22350646 - 22350777
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 160  Q
    |||||| || ||||||| || |||||||||||||||| || |||||||| ||||||| || |||| |||| ||||||||| |||  ||| |||||||  |    
T  22350646 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaatcata-tactcagaattattg 22350744  T
Q  161 aaagttagtctcacccttaccttaaattgatcg 193  Q
    || ||||||| ||||||||||||| ||||||||    
T  22350745 aaggttagtcccacccttaccttagattgatcg 22350777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 187
Target Start/End: Original strand, 45499342 - 45499446
Alignment:
Q  74 acttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctca 173  Q
    |||||||||||||||||||||||||        |||||  |||| |||||||||||||||||||||||||||||| || ||||||||| ||||| || ||    
T  45499342 acttcaaaacctaattcccaaattc--------acaaataacaatatgctaaactcaatttcagaattatacaacctaaaattagagagagttaatc-ca 45499432  T
Q  174 cccttaccttaaat 187  Q
    ||||||| ||||||    
T  45499433 cccttacgttaaat 45499446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 45755468 - 45755572
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||| |||||||||| |||||||| ||||||| || ||||  || ||| |||||| ||| |||||| ||||| |||| ||||||||||||||||    
T  45755468 aacctaattctcaaattctcaaaactacaacctacaacttgttaaatccacttttcagaatcatataacttataattaaagaaggttagtctcaccctta 45755567  T
Q  180 cctta 184  Q
    |||||    
T  45755568 cctta 45755572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 51336479 - 51336531
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  51336479 tttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 51336531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 39243700 - 39243644
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||    
T  39243700 aaagttagtctcacccttaccttggattgatcgacgaagaactataccgctttctct 39243644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 39247255 - 39247199
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||    
T  39247255 aaagttagtctcacccttaccttggattgatcgacgaagaactataccgctttctct 39247199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 1924732 - 1924675
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  1924732 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 1924675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 20923746 - 20923689
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  20923746 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 20923689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 29763684 - 29763632
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  29763684 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 29763632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 46197797 - 46197745
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  46197797 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 46197745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 44822145 - 44822090
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactac 115  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||| ||||    
T  44822145 aacaaccaattacaacttctaaacctaattcccaaatttccagaactacaacctac 44822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 635052 - 635004
Alignment:
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||| ||  ||||||||||| |||||||||||||||||||    
T  635052 agaattatacaacctattattagagaaagctagtctcacccttacctta 635004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 17901846 - 17901794
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||||||||||    
T  17901846 tttcagaattatacaacccattattagagaaagctagtctcacccttacctta 17901794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 41387651 - 41387596
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||  ||||||||| |||| ||| |||||||||||||    
T  41387651 aaagttagtctcacccttaccttggattgatcga-gaagaactataccgctttctct 41387596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 50001476 - 50001528
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  ||||||||||| |||||||||||| |||||||||||||    
T  50001476 tttcagaattaaaatacttagaattaaagaaagttagtcccacccttacctta 50001528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 38056795 - 38056672
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac-atgctaaactcaatttcagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| ||||||||||||||||   ||| |||||  ||| || || | | ||||| |  |||||||||||||||||  |  | |||||    
T  38056795 caaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattactagag 38056696  T
Q  161 aaagttagtctcacccttacctta 184  Q
    |||| ||||| |||||||||||||    
T  38056695 aaagctagtcccacccttacctta 38056672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 14792543 - 14792509
Alignment:
Q  203 tctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||| |||||||||||||||||||    
T  14792543 tctaccgctttctcttctctgactcttctcttctc 14792509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 24719491 - 24719457
Alignment:
Q  203 tctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||| |||||||||||||||||||    
T  24719491 tctaccgctttctcttctctgactcttctcttctc 24719457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 8276112 - 8276079
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaa 95  Q
    ||||||||||||||||| ||||||||||||||||    
T  8276112 caaccaattacaacttctaaacctaattcccaaa 8276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 22145718 - 22145665
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    ||||||||||| |||||  |  ||||||||||||||||| ||||||||||||||    
T  22145718 tttcagaattaaacaacccattattagagaaagttagtcccacccttaccttaa 22145665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 6834176 - 6834228
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||| |  ||||||||||| |||| |||||||| |||||    
T  6834176 tttcagaattatacaactcattattagagaaagctagtatcacccttgcctta 6834228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 28476786 - 28476734
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||| |  ||||||||||  ||||| |||||||||||||    
T  28476786 tttcagaattatacaactcattattagagaaatctagtcccacccttacctta 28476734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 175; Significance: 2e-94; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 143498 - 143716
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||||| |||||||    
T  143498 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacataattcccaaattaaaataactacaacctacaac 143597  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  143598 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattgatcgacgaaagactctaccgctttctctc 143697  T
Q  219 ctctgactcttctcttctc 237  Q
    |||| ||||||||||||||    
T  143698 ctctaactcttctcttctc 143716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 169164 - 168999
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||    
T  169164 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaagttcaaaacctaattcccaaattcccataactacaacctacaac 169065  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  169064 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctacctta 168999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 171; Significance: 6e-92; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 19 - 237
Target Start/End: Original strand, 3069 - 3286
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  3069 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 3168  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctc 218  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||||||||||    
T  3169 atactaaagtcaatttcagaattatacaacttagaattagagaaagttagtccaacccttaccttagattgatcgacgaagga-tctaccgctttctctc 3267  T
Q  219 ctctgactcttctcttctc 237  Q
    |||| ||||||||||||||    
T  3268 ctctaactcttctcttctc 3286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 2451 - 2558
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  2451 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 2550  T
Q  119 atgctaaa 126  Q
    ||||||||    
T  2551 atgctaaa 2558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 20566448 - 20566651
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||    
T  20566448 ttctacacaaattctacggattttctattctattaacaaccaattacaacttcaaaacctaattccca--------taactacaacctacaacatgctaa 20566539  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgac 225  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||    
T  20566540 actcaatttcagaattatacaactttgaattagagaaagttagtctcacccttaccttagattgattgacgaaggactctaccgctttctctcctccgac 20566639  T
Q  226 tcttctcttctc 237  Q
    |||| |||||||    
T  20566640 tcttatcttctc 20566651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 7484890 - 7485050
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  7484890 acatctcttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 7484988  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  7484989 atgctaaactcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 7485050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 21300209 - 21300044
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||    
T  21300209 acatcaattctacacaaatttaacagattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactactacctacaac 21300110  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  21300109 atgctaaacttaatttcagaattatacaacttaaaattagagaaagttagtcccacccttacctta 21300044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 36508757 - 36508580
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| |||| |||||||||||||  || |||||||| |||| || || ||||  || ||||||||| ||||||||||||||||||    
T  36508757 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctgttaaatccattttcagaatcatacaacttagaattaga 36508658  T
Q  160 gaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36508657 gaaagttagtctcacccttaccttaaattaatcgacgaaggactctaccgctttctctcatctgactcttctcttctc 36508580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 19921525 - 19921676
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||  ||||| ||||| |||||||    
T  19921525 acatcaattctacacaaattcaacagattttctactctattaacaactaattataacttcaaaacctaattcccaaatttccataattacaacctacaac 19921624  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 170  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  19921625 atgttaaactcaatttcagaattatacaacttagaattagagaaaggtagtc 19921676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 36 - 184
Target Start/End: Original strand, 31622029 - 31622169
Alignment:
Q  36 attcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttc 135  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||    
T  31622029 attcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt--------tacaaacaacaacatgctaaactcaatttc 31622120  T
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||| || ||||||||||||||| || |||||||||||||    
T  31622121 agaattatacaacctaaaattagagaaagttaatcccacccttacctta 31622169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 6551342 - 6551280
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6551342 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattgatcga 6551280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 60 - 184
Target Start/End: Original strand, 31456888 - 31457012
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| |||||||||| |||||||  || |||||||| ||||    || ||||  || ||||||||| |||| ||||| |||||||    
T  31456888 aacaaccaattacaacttctaaacctaatttccaaatttccaaaactacaacctaccttgtgttaaatccagtttcagaatcataccacttaaaattaga 31456987  T
Q  160 gaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||||    
T  31456988 gaaagttagtctcacccttacctta 31457012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 22111762 - 22111881
Alignment:
Q  66 caattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagt 165  Q
    ||||||| |||| |||||||||||| ||||||| || |   |||||| ||||||||||||||||||||||| |||||||||||  | |||||||||||||    
T  22111762 caattacgacttgaaaacctaattctcaaattcgcaaattcacaaacaacaacatgctaaactcaatttcaaaattatacaaccaaaaattagagaaagt 22111861  T
Q  166 tagtctcacccttaccttaa 185  Q
    || || ||||||||| ||||    
T  22111862 taatcccacccttacgttaa 22111881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 21618047 - 21617918
Alignment:
Q  66 caattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttc-agaattatacaacttagaattagagaaag 164  Q
    ||||| ||||||| || |||||||| ||||||| || |||||||| ||||||| || |||| |||||||  ||| |||||  ||||||||||||||||||    
T  21618047 caatttcaacttctaaccctaattctcaaattcccaaaactacaacctacaacttgttaaattcaatttttagagttatatcacttagaattagagaaag 21617948  T
Q  165 ttagtctcacccttaccttaaattgatcga 194  Q
    |||||| ||||||||||||| ||| |||||    
T  21617947 ttagtcccacccttaccttagatttatcga 21617918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 20469281 - 20469166
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctt 178  Q
    ||||||||||| ||| | | || |||||||| ||||||| || ||||  |||||| |||| |||||  |||||||||||||||||||||||| |||||||    
T  20469281 aaacctaattctcaagtccccaaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtcccaccctt 20469182  T
Q  179 accttaaattgatcga 194  Q
    |||||| |||||||||    
T  20469181 accttagattgatcga 20469166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 10753867 - 10753926
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcct 220  Q
    |||||||||||||||||||||||  |||||||||||||| ||| ||||||||||||||||    
T  10753867 aaagttagtctcacccttaccttggattgatcgacgaagaactataccgctttctctcct 10753926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 10774771 - 10774664
Alignment:
Q  76 ttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcac 174  Q
    |||||| |||||||||| ||||| || |||||||| ||||| |||| |||| ||||||| |||||| ||||| ||||||||||| ||| ||||||| |||    
T  10774771 ttcaaaccctaattcccgaattcacaaaactacaatctaca-catgttaaattcaattttcagaatcataca-cttagaattagtgaaggttagtcccac 10774674  T
Q  175 ccttacctta 184  Q
    ||||||||||    
T  10774673 ccttacctta 10774664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 17876132 - 17876251
Alignment:
Q  61 acaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattaga 159  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||||| |||| || || ||||  ||| ||||||||| |||  ||| |||||||      
T  17876132 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctaccacctgttaaatccaattttcagaatcata-tactcagaattatt 17876230  T
Q  160 gaaagttagtctcacccttac 180  Q
    ||| |||||| ||||||||||    
T  17876231 gaaggttagtttcacccttac 17876251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 18744874 - 18744936
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    |||||||||||||||||  |  ||||||||||||||||| ||||||||||||| |||||||||    
T  18744874 tttcagaattatacaacccattattagagaaagttagtcccacccttaccttagattgatcga 18744936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 266038 - 266091
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    ||||||||||| |  |||||||||||||||||||||||| ||||||||||||||    
T  266038 tttcagaattaaattacttagaattagagaaagttagtcccacccttaccttaa 266091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 10954060 - 10954141
Alignment:
Q  103 aactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||  |||||||||| ||||  |||||||| ||||| ||||||||||||||  ||| ||||||| |||||||||||||    
T  10954060 aactacatcctacaacatgttaaatccaatttcataattacacaacttagaattaaggaaggttagtcccacccttacctta 10954141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 30616614 - 30616663
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  30616614 tttcagaatcatacaacttagaattagagaaagtcagtcccacccttacc 30616663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 17011728 - 17011780
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  17011728 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 17011780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 21405751 - 21405628
Alignment:
Q  62 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattaga 159  Q
    ||||||||||||||||| || ||||||| ||||||||| || |||||||| | ||||| || |||| ||||||| |||||| ||| | || |||||||      
T  21405751 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattttcagaatcatata-ctcagaattatt 21405653  T
Q  160 gaaagttagtctcacccttacctta 184  Q
     || |||||||||||||||||||||    
T  21405652 aaaggttagtctcacccttacctta 21405628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 31252011 - 31251891
Alignment:
Q  64 accaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaa 163  Q
    |||||||| |||||| ||||||||||| |||||||  | |||||||| ||| ||| || ||||  ||||||||||||||||  |||||  || |  |||     
T  31252011 accaattataacttctaaacctaattctcaaattcctaaaactacaacctataacctgttaaatccaatttcagaattata-gacttaagatcactgaat 31251913  T
Q  164 gttagtctcacccttaccttaa 185  Q
    | ||||||||||||||||||||    
T  31251912 gatagtctcacccttaccttaa 31251891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 23199259 - 23199203
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||||||    
T  23199259 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaatt 23199203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 25249931 - 25249828
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||| ||| | |||| ||||| || |||||||||| ||||  |||||| |||||||||| |||||| ||||| |||| |||||||  |||||||    
T  25249931 aacctaattctcaa-tcctcaaaactataacctacaacatgttaaatccaattttcagaattatataacttaaaattaaagaaggttagtcctaccctta 25249833  T
Q  180 cctta 184  Q
    |||||    
T  25249832 cctta 25249828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 25313715 - 25313612
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||| ||| | |||| ||||| || |||||||||| ||||  |||||| |||||||||| |||||| ||||| |||| |||||||  |||||||    
T  25313715 aacctaattctcaa-tcctcaaaactataacctacaacatgttaaatccaattttcagaattatataacttaaaattaaagaaggttagtcctaccctta 25313617  T
Q  180 cctta 184  Q
    |||||    
T  25313616 cctta 25313612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 29448840 - 29448892
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  ||||||||||||||||||||||||||| | ||||||||    
T  29448840 tttcagaattaaattacttagaattagagaaagttagtctcatcattacctta 29448892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 20197638 - 20197604
Alignment:
Q  203 tctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||| |||||||||||||||||||    
T  20197638 tctaccgctttctcttctctgactcttctcttctc 20197604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 30138098 - 30138064
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaa 94  Q
    ||||||||||||||||||| |||||||||||||||    
T  30138098 aacaaccaattacaacttctaaacctaattcccaa 30138064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 22111727 - 22111764
Alignment:
Q  43 ggattttctactctattaacaaccaattacaacttcaa 80  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  22111727 ggattttctgctctattaacaaccaattacgacttcaa 22111764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 146; Significance: 5e-77; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 4879 - 4710
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||    
T  4879 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacgacctacaac 4780  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  4779 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccgacccttaccttaaatt 4710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 5941 - 5821
Alignment:
Q  62 caaccaattacaacttcaaaacctaattc-ccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattaga 159  Q
    ||||||||| ||||||| || |||||||  ||||||||| | |||||||| | ||||| ||  |||  |||||| |||||||| ||||||||||||||      
T  5941 caaccaatttcaacttctaaccctaattttccaaattctgaaaactacaacccacaacctgtcaaatccaattttcagaattacacaacttagaattaag 5842  T
Q  160 gaaagttagtctcacccttac 180  Q
    ||||||||||||||| |||||    
T  5841 gaaagttagtctcacacttac 5821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 11439 - 11270
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  11439 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 11340  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11339 atgctaaactcaatttcagaaatatacaacttagaattagagaaagttagtctcacccttaccttaaatt 11270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 633 - 464
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  633 acatcaattctacacaaattcaacttattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 534  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  533 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 142; Significance: 1e-74; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 31881 - 32050
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  31881 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 31980  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31981 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaatt 32050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 37188 - 37357
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  37188 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 37287  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37288 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaatt 37357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 77574 - 77739
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  77574 acatcaattatacacaaattcaacggattttctactctattaacaacctattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 77673  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  77674 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 77739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 13557 - 13382
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||||    
T  13557 acatcaattctacacaaattcaacggattttctactctattaacaaccaattataacttcaaaacctaattcccaaattcccaaaactacaacctacaac 13458  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  13457 atgctaaactcaatttcagaattatacaacttggaattagagaaagttagtcccacccttaccttagattgatcga 13382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 1092 - 1261
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||||| |||||||    
T  1092 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattacaataactacaacctacaac 1191  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1192 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 58 - 237
Target Start/End: Original strand, 35418 - 35595
Alignment:
Q  58 ttaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaatta 157  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  35418 ttaacaaccaattacgacttcaaaacctaattcccaaattcccaaaacta--acctacaacatgctaaactcaatttcagaattatacaacttagaatta 35515  T
Q  158 gagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  35516 gagaaagttagtctcacccttaccttagattgatcatcgaaggactctaccgctttctcacctctgactcttctcttctc 35595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 146610 - 146785
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  146610 acatcaattctacacaaattcaacggatttcctactctattaacaaccaattataacttcaaaacctaattcccaaattcccataactacaacctacaac 146709  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||||||    
T  146710 atgctaaactcaatttcagaattatacaacttagaattagagtaagttagtcccacccataccttagattgatcga 146785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 185
Target Start/End: Original strand, 58633 - 58799
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  58633 acatcaattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 58732  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  58733 atgctaaactcaatttcagaattgtacaacttagaattagagaaagttagtcccacccttaccttaa 58799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 861 - 696
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  861 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 762  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  761 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctacctta 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 131; Significance: 4e-68; HSPs: 3)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 5270 - 5432
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||    
T  5270 acatcaattctacacaaattcaaaggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaattcccataactacaacctacaac 5369  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5370 atgctaaacttaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 12691 - 12534
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  12691 ttctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacatgctaa 12592  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctt 183  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  12591 actcaatttcagaattatacaacttagaattagagaaagttattcccacccttacctt 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 237
Target Start/End: Complemental strand, 12506 - 12472
Alignment:
Q  203 tctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||||| |||||||||||||||||||    
T  12506 tctaccgctttctcttctctgactcttctcttctc 12472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 34226 - 34395
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  34226 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctgattcccaaattcccataactacaacctacaac 34325  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||    
T  34326 atgctaaactcaatttcagaattaaacaaattagaattagagaaagttagtcccacccttaccttaaatt 34395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 5921 - 6002
Alignment:
Q  103 aactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||  |||||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  5921 aactacatcctacaacatgttaaattcaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 6002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 129; Significance: 7e-67; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 45 - 237
Target Start/End: Complemental strand, 29711 - 29520
Alignment:
Q  45 attttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattata 144  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||    
T  29711 attttctac-ctatttacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacgacatgctaaactcaatttcagaattata 29613  T
Q  145 caacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||||||||||     ||| |||||||||||||| |||||||||||||||    
T  29612 caacttagaattatagaaagttagtcccacccttaccttagattgatcgacgaaaattactatcgctttctctcctccgactcttctcttctc 29520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 60 - 237
Target Start/End: Original strand, 21539 - 21716
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| |||| |||||||||||||  || |||||||| |||| |  || ||||  || |||| |||| ||||||||||||||||||    
T  21539 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaagctaccatctgttaaatccagtttctgaatcatacaacttagaattaga 21638  T
Q  160 gaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||| ||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||| |||||||||||||||    
T  21639 gaaagctagtcccacccttaccttagattgatcgatgaatgactctaccgctttctctcctccgactcttctcttctc 21716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 1052 - 1217
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  1052 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctaaaac 1151  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  1152 atgctaaattcaatttcagaattatacaacttagaattaggaaaagttagtcacacccttacctta 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 121; Significance: 4e-62; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 328455 - 328288
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||| || ||||    
T  328455 acatcaattctacacaaattcaactgattttctactctattaacaaccaattacaacttcgaaacctaattcccaaatttccataactacaatcttcaac 328356  T
Q  119 atgctaaactcaatttcagaattatacaactt--agaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  328355 atgctaaactcaatttcagaattatacaacttagagaattagagaaagttagtcccacccttacctta 328288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 75691 - 75839
Alignment:
Q  31 cacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactca 130  Q
    |||| |||||| |||||||||| |||||||||||||||||||||      |||||||||||||||||| || |  ||||||| ||||||||||| |||||    
T  75691 cacaaattcaatggattttctattctattaacaaccaattacaa------aacctaattcccaaattcacaaatttacaaacaacaacatgctacactca 75784  T
Q  131 atttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    |||||||||||||||||| ||  |||||||||||||| || ||||||||| ||||    
T  75785 atttcagaattatacaacctaagattagagaaagttaatcccacccttacgttaa 75839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 72841 - 72989
Alignment:
Q  29 tacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaact 128  Q
    |||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||        || ||| ||||||| |||||||    
T  72841 tacacaaattcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcacaaattc--------actaacaacaacatactaaact 72932  T
Q  129 caatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    |||||| ||||||||||||| ||  ||| |||||||||| || ||||| ||| ||||    
T  72933 caattttagaattatacaacctaagattggagaaagttaatcccacccatacgttaa 72989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 110121 - 110227
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctt 178  Q
    ||||||||| | ||||| | || |||||||| ||||||| || |||| ||||||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  110121 aaacctaatcctcaaatccccaaaactacaacctacaacttgttaaattcaattttcagaattatatcacttagaattagagaaagttagtctcaccctt 110220  T
Q  179 accttaa 185  Q
    || ||||    
T  110221 acgttaa 110227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 73064 - 73139
Alignment:
Q  109 aaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||| |||||||| ||||| |  ||| ||||| |||||||| |  ||||||||||||||||| |||||||||||||    
T  73064 aaacaacaacatgttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttacctta 73139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 21958 - 21789
Alignment:
Q  19 acatcacttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaac 118  Q
    |||||| ||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  21958 acatcaattctacacaaattcaacttattttttactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataaatacaacctacaac 21859  T
Q  119 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||| |||||||||||| ||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  21858 atgctaaattcaatttcagaactatacaacttagaattagagaaatttagtcccaccattaccttaaatt 21789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 21676 - 21637
Alignment:
Q  180 ccttaaattgatcgacgaaggactctaccgctttctctcc 219  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  21676 ccttagattgatcgacgaaggactctacagctttctctcc 21637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 4830 - 4656
Alignment:
Q  64 accaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaa 162  Q
    |||||| |||||||| |||||||||| ||||||||    |||| ||| ||||||| || |||| ||||||| ||||||||||| ||||||||||||||||    
T  4830 accaatgacaacttctaaacctaatttccaaattccacaaacttcaacctacaacttgttaaattcaattttcagaattatactacttagaattagagaa 4731  T
Q  163 agttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4730 agttagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 4656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 106175 - 105998
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    |||||||||||||||| || ||||||||||||||||||  || |||||||  |||| || || ||||  || |||| |||| ||||||||||||||||||    
T  106175 aacaaccaattacaacgtctaaacctaattcccaaatttccaaaactacagtctaccacctgttaaatccagtttccgaatcatacaacttagaattaga 106076  T
Q  160 gaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  106075 gaaagttagtcacacccttaccttagattgatcgacgaaggactctaccgctttctctcctttgactcttctcttctc 105998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 78298 - 78181
Alignment:
Q  71 acaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 170  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  78298 acaacttcaaaacctaatttccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 78199  T
Q  171 tcacccttaccttaaatt 188  Q
     |||||||||||||||||    
T  78198 ccacccttaccttaaatt 78181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 26 - 189
Target Start/End: Original strand, 19655 - 19810
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        |||  ||||||| ||||||    
T  19655 ttctacacaaattcaatggattttctactctattaacaaccaattacaacttaaaaacctaattcccaaattc--------acagcctacaacttgctaa 19746  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattg 189  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  19747 actcaatttgagaattatacaacttagaattagagaaagtcagtctcacccttaccttagattg 19810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 78958 - 79105
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |               |||||||||||||||    
T  78958 ttctacacaaattcaatggattttctactttattaacaaccaattacaacttcaaaacctaattcccata---------------actacaacatgctaa 79042  T
Q  126 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  79043 actcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 79105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 24235 - 24127
Alignment:
Q  80 aaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24235 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaccctta 24136  T
Q  180 ccttaaatt 188  Q
    |||||||||    
T  24135 ccttaaatt 24127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 30023 - 30156
Alignment:
Q  84 ctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacct 182  Q
    ||||||||||||| |||| ||||| || |||||||||| ||||  |||||| |||||||| |  ||||||| |||  ||| ||||||| |||||||||||    
T  30023 ctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagatttattgaaggttagtcccacccttacct 30121  T
Q  183 taaattgatcgacgaaggactctaccgctttctct 217  Q
    |  |||||||||||||||||| |||||||||||||    
T  30122 tggattgatcgacgaaggactataccgctttctct 30156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 8571 - 8747
Alignment:
Q  62 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattaga 159  Q
    ||||||||||||||||| || ||||||| ||||||||| || |||||||| ||||||| || |||| ||||||| |||||| ||||| |||||||||||     
T  8571 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcataca-cttagaattagt 8669  T
Q  160 gaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||| ||||||| ||||||||||||| ||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  8670 gaaggttagtcccacccttaccttagattgatcgatgtaagactctaccgctttctctcctctgactcttctcttctc 8747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 18744 - 18856
Alignment:
Q  29 tacacagattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaaattctcataactacaaactacaacatgctaaac 127  Q
    |||||| |||| | |||||||||| || ||||||||| |||| ||| | |||||||||||||||||| | |||| || | | ||| |||||||| |||||    
T  18744 tacacaaattctatggattttctattcaattaacaactaattgcaattctcaaaacctaattcccaattcctca-aattcccaaccacaacatgttaaac 18842  T
Q  128 tcaatttcagaatt 141  Q
    ||||||||||||||    
T  18843 tcaatttcagaatt 18856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 2020 - 2125
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2020 tttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttct 2119  T
Q  232 cttctc 237  Q
    ||||||    
T  2120 cttctc 2125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 186248 - 186143
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||  |  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  186248 tttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttct 186149  T
Q  232 cttctc 237  Q
    ||||||    
T  186148 cttctc 186143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 2793 - 2946
Alignment:
Q  29 tacacagattcaacggattttctactctattaacaaccaatt-acaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaac 127  Q
    |||||| |||||| |||||||||| ||||||||||||||||| || | ||||||||||||||| |||||||        |||||| ||||||||||||||    
T  2793 tacacaaattcaaaggattttctattctattaacaaccaatttactaattcaaaacctaattcacaaattc--------acaaacaacaacatgctaaac 2884  T
Q  128 tcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattg 189  Q
    ||||||||||||||||||||| || ||||||||||||||| || ||||||||||||| ||||    
T  2885 tcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttagattg 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 2520 - 2604
Alignment:
Q  97 tctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2520 tctnataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 74; Significance: 5e-34; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 5176 - 5310
Alignment:
Q  38 tcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcag 137  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||        |||||| ||||||||| ||||||||||||||    
T  5176 tcaatggattttctattctattaacaaccaattacaacttcaaaacgtaattcccaaattc--------acaaacaacaacatgcaaaactcaatttcag 5267  T
Q  138 aattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    ||||||||||| ||  |||||||||||||| || |||||||||    
T  5268 aattatacaacctaagattagagaaagttaatcccacccttac 5310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 180
Target Start/End: Original strand, 11296 - 11430
Alignment:
Q  38 tcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcag 137  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||| ||||||||||||||    
T  11296 tcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattc--------acaaacaacaacatgcaaaactcaatttcag 11387  T
Q  138 aattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    ||| ||||||| ||  |||||||||||||| || |||||||||    
T  11388 aatgatacaacctaagattagagaaagttaatcccacccttac 11430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 185
Target Start/End: Original strand, 19605 - 19759
Alignment:
Q  30 acacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactc 129  Q
    ||||| |||||| |||||||||| | ||||||||| |||||||||||||| |||||||||| ||||||| || |   |||||| ||||||||||||||||    
T  19605 acacaaattcaatggattttctatt-tattaacaatcaattacaacttcataacctaattctcaaattcacaaattcacaaacaacaacatgctaaactc 19703  T
Q  130 aatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaa 185  Q
    ||||||||||||||| ||| ||  |||||||||| ||| || ||| ||||| ||||    
T  19704 aatttcagaattatataacctaagattagagaaatttaatcccacacttacgttaa 19759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 5454 - 5506
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||| |  ||||||||||| ||||| |||||||||||||    
T  5454 tttcagaattatacaactcattattagagaaaggtagtcccacccttacctta 5506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 72; Significance: 7e-33; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 113125 - 112956
Alignment:
Q  26 ttctacacagattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaa 125  Q
    ||||||||  |||||||  |||||||||| | | ||||||||||||||||||| ||||||||||||||||||| || || ||||| ||||||| || |||    
T  113125 ttctacaccaattcaacaaattttctactgt-taaacaaccaattacaacttctaaacctaattcccaaattcccaaaattacaacctacaacttgttaa 113027  T
Q  126 actcaa--tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    | ||||  ||||||| |||||  |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  113026 attcaatttttcagagttatatcacttagaattagagaaagttagtcccacccttatcttagattgatcga 112956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 81501 - 81620
Alignment:
Q  66 caattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttc-agaattatacaacttagaattagagaaag 164  Q
    ||||||||||||| ||||||||||||||||||| || |||||||| ||||||| || |||| |||||||  ||||| || ||  |||||||||| ||| |    
T  81501 caattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaatttttagaatcatccat-ttagaattagtgaagg 81599  T
Q  165 ttagtctcacccttaccttaa 185  Q
    |||||| ||||||||||||||    
T  81600 ttagtcccacccttaccttaa 81620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 117925 - 117807
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt--cagaattatacaacttagaatta 157  Q
    ||||||||||||||||||| |||||||||||||||| |        ||||| || |||| || |||| |||||||  |||| |||||  |||||||||||    
T  117925 aacaaccaattacaacttctaaacctaattcccaaaat--------tacaatcttcaacttgttaaattcaatttttcagagttatatcacttagaatta 117834  T
Q  158 gagaaagttagtctcacccttacctta 184  Q
    ||||||||||||| |||||||||||||    
T  117833 gagaaagttagtcccacccttacctta 117807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 6809 - 6678
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| |||||||||||| |||||  || |||||||| |||| || || ||||  || ||||||||| ||||||||||||||||||    
T  6809 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 6710  T
Q  160 gaaagttagtctcacccttaccttaaattgat 191  Q
    ||||||||||| |||||||||| || ||||||    
T  6709 gaaagttagtcccacccttaccatatattgat 6678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 9085 - 9167
Alignment:
Q  154 attagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttctcttct 236  Q
    |||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9085 attaaagaaggttagtcccacccttaccttagattgatcgacgaaggactctaccgctttctctcctctgactcttctcttct 9167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 189
Target Start/End: Complemental strand, 26776 - 26629
Alignment:
Q  36 attcaacggattttctactctattaacaaccaa-ttacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt 134  Q
    |||||| |||||||||||||||||||||||||| |||| | |||||||||||||||||||||||        |||||| |||||||||||||||||||||    
T  26776 attcaatggattttctactctattaacaaccaaattactaattcaaaacctaattcccaaattc--------acaaacaacaacatgctaaactcaattt 26685  T
Q  135 -cagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattg 189  Q
     |||||||||||||| || ||||| ||||||||| || ||||||||| ||| ||||    
T  26684 tcagaattatacaacctaaaattaaagaaagttaatcccacccttactttagattg 26629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 10741 - 10851
Alignment:
Q  67 aattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagtt 166  Q
    ||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  10741 aattacaacttcaaaacctaattcccaaattc--------acaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagtt 10832  T
Q  167 agtctcacccttaccttaa 185  Q
    | || ||||||||| ||||    
T  10833 aatcccacccttacattaa 10851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 40084 - 40212
Alignment:
Q  109 aaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctacc 208  Q
    |||| |||||||| ||||| |  ||| ||||| |||||||  |  ||||||||||||||||| || |||||||||| ||||||||||||||||||||| |    
T  40084 aaacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagttagtcgcatccttaccttagattgatcgacgaaggactctatc 40183  T
Q  209 gctttctctcctctgactcttctcttctc 237  Q
    |||||||||||||||||||||||| ||||    
T  40184 gctttctctcctctgactcttctcctctc 40212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 10877 - 10755
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| || |||||||||||||||| || ||||| || ||||||| || ||||  || ||||| ||| ||||||||||||||||||    
T  10877 aacaaccaattacaacttctaaccctaattcccaaattccca-aacta-aacctacaacctgttaaatccagtttcacaatcatacaacttagaattaga 10780  T
Q  160 gaaagttagtctcacccttacctta 184  Q
    ||||||||||| |||||||||||||    
T  10779 gaaagttagtcccacccttacctta 10755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 5097 - 5045
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  5097 tttcacaatcatacaacttagaattagagaaagttagtcccacccttacctta 5045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 1937 - 1989
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  ||||||||||||| |||||||||| ||||||| |||||    
T  1937 tttcagaattaaaatacttagaattagataaagttagtcccaccctttcctta 1989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 60843 - 60947
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||| ||||| |||| |||||||| |||||||||| |||| |||||| |||||||||||||||||||||||| |||| |||||||||| |||||    
T  60843 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatcctta 60942  T
Q  180 cctta 184  Q
    |||||    
T  60943 cctta 60947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 1181 - 1058
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    |||| |||||||||||| || ||||| ||||||||||||| |||| ||| ||||||| || |||| ||||||| ||||||||||  ||||||||| ||||    
T  1181 caactaattacaacttctaaccctaaatcccaaattctcaaaactccaacctacaacttgttaaattcaattttcagaattataacacttagaataagag 1082  T
Q  161 aaagttagtctcacccttacctta 184  Q
    |||||||||| |||||||||||||    
T  1081 aaagttagtcccacccttacctta 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 16532 - 16650
Alignment:
Q  60 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattaga 159  Q
    ||||||||||||||||||| |||||||||| |||||||  || |||||||| |||| ||||| ||||  || ||||||||| ||||||||||||||||||    
T  16532 aacaaccaattacaacttctaaacctaattgccaaatttccaaaactacaacctaccacatgttaaatccagtttcagaatcatacaacttagaattaga 16631  T
Q  160 gaaagttagtctcaccctt 178  Q
     ||| |||||| |||||||    
T  16632 taaatttagtcccaccctt 16650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 2247 - 2352
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctctcctctgactcttct 231  Q
    |||||||||||||||||  |  |||| |||||| ||||| ||||||||||||| |||| ||||||||||||||||||  |||||||||||||||| ||||    
T  2247 tttcagaattatacaacccattattatagaaagctagtcccacccttaccttagattggtcgacgaaggactctacctttttctctcctctgactattct 2346  T
Q  232 cttctc 237  Q
    ||||||    
T  2347 cttctc 2352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 20202 - 20047
Alignment:
Q  67 aattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagt 165  Q
    |||||||||||| |||| |||||||||||||| || ||||| || ||||||| || |||| ||||||| |||||||||||| ||||||||||| ||| ||    
T  20202 aattacaacttctaaacataattcccaaattccca-aactataacctacaacctgttaaattcaattttcagaattataca-cttagaattagtgaaggt 20105  T
Q  166 tagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctct 222  Q
    ||||| | |||||||||||  |||||||| || | |||||||||||||||||| ||||    
T  20104 tagtcccgcccttaccttaggttgatcgatcgcaagactctaccgctttctcttctct 20047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 217
Target Start/End: Original strand, 30607 - 30739
Alignment:
Q  85 taattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacctt 183  Q
    ||||| ||||||||||| ||||| || |||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| ||||||||||||||||||||    
T  30607 taatttccaaattctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtctcacccttacctt 30705  T
Q  184 aaattgatcgacgaaggactctaccgctttctct 217  Q
      |||||||||||||||||| |||||||||||||    
T  30706 ggattgatcgacgaaggactataccgctttctct 30739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 195
Target Start/End: Complemental strand, 135625 - 135493
Alignment:
Q  63 aaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagaga 161  Q
    |||||||| ||||||| ||  ||||||||||||||| || |||||||| ||||||| || |||| |||| |||||||||||||| |||||||||||| ||    
T  135625 aaccaatttcaacttctaactctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaattatac-acttagaattagtga 135527  T
Q  162 aagttagtctcacccttaccttaaattgatcgac 195  Q
    | ||||||| |||||||||||||  |||||||||    
T  135526 aggttagtcccacccttaccttaggttgatcgac 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 126407 - 126305
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||| ||||| |||| |||||||| ||||||| || ||||  |||||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  126407 aacctaattctcaaatcctcaaaactacaatctacaacttgttaaatccaatttcagaatcatacaacttagaattagagaaagttagtccca-ccttac 126309  T
Q  181 ctta 184  Q
    ||||    
T  126308 ctta 126305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 3174 - 3042
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 160  Q
    ||||||||||||||||| || ||||||||| |||||| || |||||||| ||||||| || |||| |||| ||||||||| |||| |||||||||||  |    
T  3174 caaccaattacaacttctaaccctaattcctaaattcccaaaactacaacctacaacttgttaaattcaattttcagaataatac-acttagaattattg 3076  T
Q  161 aaagttagtctcacccttaccttaaattgatcga 194  Q
    || ||||||| ||||||||||||  |||||||||    
T  3075 aaggttagtcccacccttaccttggattgatcga 3042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 61900 - 61848
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  61900 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 61848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 7504 - 7645
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||||||||| |||| ||||| ||  ||||||||| ||||  || ||| |||||||| |  |||||||||||  ||| | ||||| ||||||||    
T  7504 aacctaattcccaaatcctcaaaacta-aacttacaacatgttaaatacatttttcagaattaaaacacttagaattattgaaggctagtcccaccctta 7602  T
Q  180 ccttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||||  |||||||||||||||||||||||||||||||| ||||    
T  7603 ccttggattgatcgacgaaggactctaccgctttctcttctct 7645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 67060 - 67181
Alignment:
Q  72 caacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtc 170  Q
    ||||||| |||||| ||||||||||||  | |||||||| ||||||  || ||||  |||||| ||||||||||| |||| |||||||||||||||||||    
T  67060 caacttctaaaccttattcccaaattcctaaaactacaacctacaatttgttaaatccaattttcagaattataccacttcgaattagagaaagttagtc 67159  T
Q  171 tcacccttaccttaaattgatc 192  Q
     |||| |||||||| |||||||    
T  67160 ccacctttaccttagattgatc 67181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 18275 - 18381
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt-gatcgacgaaggactctaccgctttctctcctctgactcttc 230  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||  || |||   || | |  ||||||||||||||| ||||||||||||    
T  18275 tttcagaattatacaacccattattagagaaagctagtcacacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctgactcttc 18374  T
Q  231 tcttctc 237  Q
    |||||||    
T  18375 tcttctc 18381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 2143 - 2020
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagag 160  Q
    ||||||||||||||||  ||||||||||||||||||  || |||||||| |||||||||| |||| |||| ||||| ||| |||| |||||||||||| |    
T  2143 caaccaattacaacttataaacctaattcccaaatttccaaaactacaacctacaacatgttaaattcaattttcaaaatcatac-acttagaattagtg 2045  T
Q  161 aaagttagtctcacccttaccttaa 185  Q
    || |||| || |||||||| |||||    
T  2044 aaggttaatcccacccttagcttaa 2020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 17992 - 17940
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17992 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 7205 - 7329
Alignment:
Q  62 caaccaattacaacttcaaaacctaattc-ccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattaga 159  Q
    ||||||||||||||||| || |||||||  |||||||| || ||||| || ||||||||||  |||  |||||| ||||||||||||||||||||||| |    
T  7205 caaccaattacaacttctaaccctaattttccaaattcccaaaactataacctacaacatgtcaaatccaattttcagaattatacaacttagaattaaa 7304  T
Q  160 gaaagttagtctcacccttacctta 184  Q
    ||| ||||||| |||||| ||||||    
T  7305 gaatgttagtcccaccctcacctta 7329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 1922 - 1855
Alignment:
Q  109 aaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcaccc 176  Q
    |||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  1922 aaacaacaacatgttaaattcaatttcagaattataccacttagaattagagaaagttagtcccaccc 1855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 120905 - 121039
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    |||||||| ||||| |||| ||||| || |||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||| ||||||||||    
T  120905 cctaattcacaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacc 121003  T
Q  182 ttaaattgatcgacgaaggactctaccgctttctct 217  Q
    ||  |||||||||||||| |||||||||||||||||    
T  121004 ttggattgatcgacgaagaactctaccgctttctct 121039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 29268 - 29216
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| |||||||||    
T  29268 tttcagaattaaaatacttagaattagagaaagttagtcccactcttacctta 29216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 222
Target Start/End: Original strand, 21648 - 21785
Alignment:
Q  85 taattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacctt 183  Q
    |||||||||||| || | ||||| || |||||||||| ||||  |||||| || ||||| |  |||||||||||  ||| | ||||| ||||||||||||    
T  21648 taattcccaaatcctaaaaacta-aacctacaacatgttaaatacaattttcaaaattaaaacacttagaattattgaaggctagtcccacccttacctt 21746  T
Q  184 aaattgatcgacgaaggactctaccgctttctctcctct 222  Q
      |||||||||||||||||||||||||||||||| ||||    
T  21747 ggattgatcgacgaaggactctaccgctttctcttctct 21785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 237
Target Start/End: Complemental strand, 158949 - 158768
Alignment:
Q  57 attaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaat 155  Q
    |||| |||||| || ||||||| || |||||||||||||||| || |||||||| ||||||| || ||||  ||| ||| ||||| |||  ||| |||||    
T  158949 attatcaaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaatccaatttttagaatcata-tactcagaat 158851  T
Q  156 tagagaaagttagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctctgactcttctcttctc 237  Q
    ||  ||| ||||||| ||||||||||||| |||||| || || | |  | ||||||||||||| |||||||||||||||||||    
T  158850 tattgaaggttagtcccacccttaccttagattgattgatcgcaaggttttaccgctttctcttctctgactcttctcttctc 158768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 16471 - 16412
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgat 191  Q
    |||||||||||||||||  |  |||||| ||||||| |||||||||||||||| ||||||    
T  16471 tttcagaattatacaacccattattagataaagttaatctcacccttaccttagattgat 16412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 5761 - 5712
Alignment:
Q  130 aatttcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5761 aatttcagaattatacaacttagaattagagaaagttagtcccaccctta 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 2252 - 2200
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  2252 tttcagaattatacaacttagaattagagaaaattagtcccacccttacctta 2200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 4888 - 4992
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    ||||||||||  |||| |||| |||||||  |||||||||| ||||  ||| | |||||||||||||||||||||||| |||| ||||||| ||||||||    
T  4888 aacctaattcttaaatcctcaaaactacatcctacaacatgttaaatccaactctcagaattatacaacttagaattaaagaaggttagtcccaccctta 4987  T
Q  180 cctta 184  Q
    |||||    
T  4988 cctta 4992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 4333 - 4437
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||| ||||| |||| |||||||| |||||||||| ||||  || || |||||||||||||||||||||||| |||| ||||||| || | |||    
T  4333 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccagttctcagaattatacaacttagaattaaagaaggttagtcccatcgtta 4432  T
Q  180 cctta 184  Q
    |||||    
T  4433 cctta 4437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 19207 - 19255
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19207 tttcagaattatacaacttagaattagagaaagttagtcccacccttac 19255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 15272 - 15324
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  15272 tttcagaataatacaacttagaattagagaaagttagtcccacccttacctta 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 96347 - 96455
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||| | ||| |||| |||||||| ||||||| || ||||  || ||||||||| |||||||| |||||||||||||||||||| |||| ||||    
T  96347 aacctaattctccaatcctcaaaactacaacctacaacttgttaaatccattttcagaatcatacaactcagaattagagaaagttagtcccacctttac 96446  T
Q  181 cttaaattg 189  Q
     ||| ||||    
T  96447 tttagattg 96455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 398510 - 398614
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    ||||||||||  |||| |||| |||||||  |||||||||| ||||  ||||| ||||||||||||||| |||||||| |||| ||||||| ||||||||    
T  398510 aacctaattcttaaatcctcaaaactacatcctacaacatgttaaatccaattctcagaattatacaacctagaattaaagaaggttagtcccaccctta 398609  T
Q  180 cctta 184  Q
    |||||    
T  398610 cctta 398614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 22050 - 22187
Alignment:
Q  84 ctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacct 182  Q
    ||||||||||||| |||| ||||| || |||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||| |||| ||||||    
T  22050 ctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacc-ttacct 22147  T
Q  183 taaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    |  |||||||||||||||||| ||||||||||||| ||||    
T  22148 tggattgatcgacgaaggactttaccgctttctcttctct 22187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 6674 - 6620
Alignment:
Q  43 ggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 97  Q
    |||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  6674 ggatcttctactctattaacaaccaattacgacatcaaaacctaattcccaaatt 6620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 19924 - 20006
Alignment:
Q  103 aactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||| ||||||| || ||||  |||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  19924 aactacaacctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccacccttacctta 20006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 13878 - 13911
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaa 95  Q
    ||||||||||||||||| ||||||||||||||||    
T  13878 caaccaattacaacttctaaacctaattcccaaa 13911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 6418 - 6524
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctctgactcttc 230  Q
    ||||||||||| |||||| |  ||||||||||| |||||| |||||||||||| |||||| || || | |  ||||||||||||||| |||||| |||||    
T  6418 tttcagaattacacaactcattattagagaaagctagtcttacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctgaatcttc 6517  T
Q  231 tcttctc 237  Q
    |||||||    
T  6518 tcttctc 6524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 5311 - 5418
Alignment:
Q  76 ttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcac 174  Q
    |||||| |||||||||| ||||| || |||||||| ||||| |||| |||| ||||||| |||||| ||||| ||||||||||| ||| ||||||| |||    
T  5311 ttcaaaccctaattcccgaattcacaaaactacaatctaca-catgttaaattcaattttcagaatcataca-cttagaattagtgaaggttagtcccac 5408  T
Q  175 ccttacctta 184  Q
    ||||||||||    
T  5409 ccttacctta 5418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 5353 - 5305
Alignment:
Q  136 agaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  5353 agaattatacaacttaaaattagagaaagttagtcccacccttacctta 5305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 12723 - 12584
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    |||||| ||||||| |||| ||||| || |||||||||| ||||  |||||| |||||||| |  |||||||||||  ||| | ||||   ||||||||     
T  12723 cctaatccccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagttctacccttact 12625  T
Q  182 ttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
    ||  |||||||||||||||||||||||||||||||| ||||    
T  12624 ttggattgatcgacgaaggactctaccgctttctcttctct 12584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 52648 - 52544
Alignment:
Q  81 aacctaattcccaaattctcataactacaaactacaacatgctaaactcaatt-tcagaattatacaacttagaattagagaaagttagtctcaccctta 179  Q
    |||||||||| ||||| |||| |||||||  |||||||||| ||||  ||||| ||||||||| ||||||||||||||  ||| ||||||| ||||||||    
T  52648 aacctaattctcaaatcctcaaaactacatcctacaacatgttaaatccaattctcagaattacacaacttagaattaatgaaggttagtcccaccctta 52549  T
Q  180 cctta 184  Q
     ||||    
T  52548 tctta 52544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 26727 - 26833
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga-cgaaggactctaccgctttctctcctctgactcttc 230  Q
    ||||||||||||||||| || ||||||||||||||| || |||||||||| || |||||| || || | |  ||||||||||||||| ||||  ||| ||    
T  26727 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccgtagattgattgatcgcaaggttctaccgctttctcttctctagctcatc 26826  T
Q  231 tcttctc 237  Q
    |||||||    
T  26827 tcttctc 26833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 904 - 961
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  904 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 13690 - 13633
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  13690 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 13633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 21664 - 21607
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  21664 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 21607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 35689 - 35632
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  35689 aaagttagtctcacccttacctttggattgatcgacgaaggactctactgctttctct 35632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 5913 - 5861
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||  ||||||||||||||||||||||| ||||| ||||||||    
T  5913 tttcagaattataacacttagaattagagaaagttagtatcacctttacctta 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 5029 - 5081
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  5029 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 5081  T

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Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 12323 - 12403
Alignment:
Q  61 acaaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaa-catgctaaactcaatttcagaat 140  Q
    |||||| ||||||||||| ||||||||||| ||||||  || |||||||| |||||| |||| |||| |||||||||||||    
T  12323 acaacctattacaacttctaaacctaattctcaaatttccaaaactacaacctacaaccatgttaaattcaatttcagaat 12403  T

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Target: scaffold0436 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 8960 - 9012
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  8960 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 9012  T

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Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 5029 - 5081
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  5029 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 21097 - 21149
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  21097 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 21149  T

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Target: scaffold0138; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 34112 - 34164
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  34112 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 34164  T

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Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 69905 - 69853
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||||||||    
T  69905 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 69853  T

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Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 126742 - 126881
Alignment:
Q  83 cctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttacc 181  Q
    |||||||||||| | |||| ||||| || || ||||||| ||||  |||||| |||||||| |  |||||||||||   || | ||||| ||||||||||    
T  126742 cctaattcccaagtcctcaaaacta-aacctgcaacatgttaaatacaattttcagaattaaaacacttagaattatttaaggctagtcccacccttacc 126840  T
Q  182 ttaaattgatcgacgaaggactctaccgctttctctcctct 222  Q
     |  ||||||||||||||||||||| |||||||||| ||||    
T  126841 atggattgatcgacgaaggactctatcgctttctcttctct 126881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 4612 - 4718
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagaga 161  Q
    |||| |||||||||||| ||||||||||| ||||||| || ||| |||| ||| ||| || |||| ||||||| ||||| |||| |||||| ||||| ||    
T  4612 caactaattacaacttctaaacctaattctcaaattcccaaaaccacaacctaaaacctgttaaattcaattttagaatcatac-acttaggattagtga 4710  T
Q  162 aagttagt 169  Q
    | ||||||    
T  4711 aggttagt 4718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 185
Target Start/End: Complemental strand, 233 - 195
Alignment:
Q  147 acttagaattagagaaagttagtctcacccttaccttaa 185  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  233 acttagaattagagaaagttagtcccacccttaccttaa 195  T

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Target: scaffold0229 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 11104 - 11047
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    ||||||||| |||||||||||||   |||||||||||||||||||||| |||||||||    
T  11104 aaagttagtttcacccttacctttggattgatcgacgaaggactctactgctttctct 11047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 32263 - 32206
Alignment:
Q  161 aaagttagtctcacccttaccttaa-attgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||   ||||||||| |||||||||||| |||||||||    
T  32263 aaagttagtctcacccttacctttggattgatcgaagaaggactctactgctttctct 32206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 2506 - 2450
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||||||    
T  2506 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaatt 2450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 9004 - 9111
Alignment:
Q  76 ttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacc 175  Q
    |||||| ||||||||||||||||  | |||||||| ||||||| || ||||  || ||||||||||| |  ||| |||||||  ||| ||||||| ||||    
T  9004 ttcaaaccctaattcccaaattccaaaaactacaacctacaacctgttaaatccagtttcagaattaca-tactcagaattactgaaggttagtcccacc 9102  T
Q  176 cttacctta 184  Q
    |||||||||    
T  9103 cttacctta 9111  T

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Target: scaffold0572 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 10652 - 10597
Alignment:
Q  161 aaagttagtctcacccttaccttaaattgatcgacgaaggactctaccgctttctct 217  Q
    |||||||||||||||||||||||  ||||||||| |||| ||| |||||||||||||    
T  10652 aaagttagtctcacccttaccttggattgatcga-gaagaactataccgctttctct 10597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 11223 - 11275
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||| |  |||| ||||||||||||||||| |||||||||||||||    
T  11223 tttcagaattaaaatacttggaattagagaaagttagactcacccttacctta 11275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 5633 - 5689
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 188  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||||||    
T  5633 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaatt 5689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 14638 - 14586
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||||||||||    
T  14638 tttcagaattatacaacccattattagagaaagctagtctcacccttacctta 14586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 23696 - 23644
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||  |  ||||||||||| |||||||||||||||||||    
T  23696 tttcagaattatacaacccattattagagaaagctagtctcacccttacctta 23644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 29388 - 29440
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||| |||||||||||||||| ||||  |||||| |||||||||||||    
T  29388 tttcagaatcatacaacttagaattaaagaagattagtcccacccttacctta 29440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 18764 - 18731
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaa 95  Q
    ||||||||||||||||| ||||||||||||||||    
T  18764 caaccaattacaacttctaaacctaattcccaaa 18731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 180
Target Start/End: Original strand, 6383 - 6416
Alignment:
Q  147 acttagaattagagaaagttagtctcacccttac 180  Q
    |||||||||||||||||||||||| |||||||||    
T  6383 acttagaattagagaaagttagtcccacccttac 6416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 21814 - 21777
Alignment:
Q  147 acttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||||||||| || ||||||||||    
T  21814 acttagaattagagaaagttagtcccatccttacctta 21777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 2881 - 2933
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||||    
T  2881 tttcagaattatacaacccattattagagaaagctagtcccacccttacctta 2933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 13498 - 13407
Alignment:
Q  103 aactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattgatcga 194  Q
    |||||||| ||||||| || |||| ||| ||| |||||||| ||  ||||||||||  ||| ||||||| ||||||||||||| |||||||||    
T  13498 aactacaacctacaacttgttaaattcagttttcagaattaaacc-cttagaattattgaaggttagtcccacccttaccttagattgatcga 13407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 1076 - 1128
Alignment:
Q  132 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 184  Q
    ||||||||||||||||   |  ||||||||||| |||||||||||||||||||    
T  1076 tttcagaattatacaatccattattagagaaagctagtctcacccttacctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 28451 - 28328
Alignment:
Q  62 caaccaattacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaattt-cagaattatacaacttagaattagag 160  Q
    |||||| || ||||||| || ||||||| |||||||| || |||||||| ||||||| || ||||  |||||| |||||| ||| | || |||||||  |    
T  28451 caaccatttgcaacttctaaccctaatttccaaattcccaaaactacaacctacaacttgttaaatccaattttcagaatcatata-ctcagaattattg 28353  T
Q  161 aaagttagtctcacccttaccttaa 185  Q
    || | ||||| ||||||||||||||    
T  28352 aagggtagtcccacccttaccttaa 28328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 31046 - 31160
Alignment:
Q  69 ttacaacttcaaaacctaattcccaaattctcataactacaaactacaacatgctaaactcaa-tttcagaattatacaacttagaattagagaaagtta 167  Q
    |||||||||  || |||||||||||||||| || |||||||| ||||||| || ||||  ||| ||||||||||| |  ||| |||||||  ||| ||||    
T  31046 ttacaacttttaaccctaattcccaaattccca-aactacaacctacaacttgttaaatccaattttcagaattaca-tactcagaattattgaaggtta 31143  T
Q  168 gtctcacccttacctta 184  Q
    ||| |||||||||||||    
T  31144 gtcccacccttacctta 31160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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